Rmu_sc0037294.1_g000002

Peptide chain release factor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0037294.1
Physical Location & Seq
Reverse (-)
12645 .. 17289
4645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0037294.1_g000002.1.cds

Sequence Viewer

Length: 1575 bp
atgacacaccgcctggcttgggctttcgctgccactaccaagcgggcaatcgacaaagggctcttgcaggacatttacaggtgggcccttaaaaagtctgaccgggtcaaggagtcgccccaagttgactcaccggcgagaaagggccagaaatcgggggacttggacctcattcacttactcgaagcgaccatggaggttcatctaaaacctctatgcagctcaacagctgtcttatcccccaaagcttccaatactagactaccacagttaccacgcaagtccacttcctcttgtgcttctcgtatatcctacaatttacctttctccactacgctttccacaccttctagattctctccttctgttttatttgcgacaccggagagtagtcaagtaagcgcggaagtcaacaccaacgaaagagaatgggcaatgcaagatttctatacattgagaagggaggtagaaattgcggcaggacgtgttgaagagataagagcttccgcttgtctggaacagttggaaaaagaagttgccgagttggaatccgaagcagctgatagctccttttgggatgatcgagctaaggctcaagagaaccttttggccctcactgatgtcaaagacagaataaaatcgcttactcacttcaaaacacaggttgaagatgcggaaacaatagtcaagctaactgaagagatggactccacagataatgcacttcttgaagaggctgccagtatcatcaaggaattgaacaagggaatggatcggtttgagttaactcaacttctttcagggccttatgacaaagaaggtgctgttatttctgttacagccggtgctggaggcactgacgcacaggattgggctgaaatgttactcaggatgtatatgaggtggggagaaaagcagagatacaaaactcgagtggttgagagatccccaggagaggaagctggaattaagtcggcgacactcgaagttgaaggtcgttatgcttatggttatttgtctggggagaaaggcacacaccgcattgtacgacagtctccttttaatgccaaaggtcttcgccagacaagcttctctggtgtggaagtgatgcctctcctacctgaggaatcactgaaagttgaaatacctgaagaagacctggagataaccacttcaagggcaggtgggaagggaggtcagaatgtgaataaaattgaaagtgctgtccggattactcacatccccactggtgttactgttcgctgcacagaagagagatcccagcttgcaaacagaataaaggctctaagcaggttgaaagcgaagctgttggtgatagctgaggagcaacgagcatcggagattaagcaaatacgaggagatgcagtgaaggcagagtgggggcaacaaataaggaactatgtgttccatccgtacaaactcgtcaaggatgtaaggacaggatatgagacatctgatatcacttctgtgatggacggtgatttggagccttacatcaaagcctacctcaaacataaatacagtatgaaaatcagtgcatcaagtaaagcctag

Protein Analysis

524

Amino Acids

58.55

Weight (kDa)

6.76

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1172
Acc36I ACCTGC 2 cut(s) 1172, 1302
AccII CGCG 1 cut(s) 404
AccIII TCCGGA 1 cut(s) 1227
AciI CCGC 7 cut(s) 10, 43, 404, 476, 507, 674, 1039
AclWI GGATC 3 cut(s) 780, 939, 1272
AcuI CTGAAG 2 cut(s) 717, 1170
AfaI GTAC 2 cut(s) 1047, 1436
AfiI CCNNNNNNNGG 6 cut(s) 19, 109, 154, 955, 1123, 1176
AflIII ACRYGT 1 cut(s) 484
AjiI CACGTC 1 cut(s) 485
AjnI CCWGG 3 cut(s) 12, 949, 1158
AleI CACNNNNGTG 1 cut(s) 1487
Alw26I GTCTC 2 cut(s) 1059, 1463
AlwI GGATC 3 cut(s) 780, 939, 1272
Ama87I CYCGRG 1 cut(s) 930
Aor13HI TCCGGA 1 cut(s) 1227
AoxI GGCC 4 cut(s) 84, 145, 609, 803
ApaI GGGCCC 1 cut(s) 88
ApeKI GCWGC 5 cut(s) 29, 219, 557, 737, 1263
AspLEI GCGC 1 cut(s) 404
AspS9I GGNCC 6 cut(s) 84, 85, 145, 166, 610, 803
AsuC2I CCSGG 1 cut(s) 104
AsuHPI GGTGA 3 cut(s) 123, 1345, 1511
AvaI CYCGRG 1 cut(s) 930
AvaII GGWCC 1 cut(s) 166
AxyI CCTNAGG 1 cut(s) 1122
BaeGI GKGCMC 1 cut(s) 88
BanII GRGCYC 2 cut(s) 63, 88
BbsI GAAGAC 2 cut(s) 1067, 1161
BbvCI CCTCAGC 1 cut(s) 1341
BbvI GCAGC 5 cut(s) 16, 231, 569, 724, 1250
BccI CCATC 3 cut(s) 697, 1437, 1486
BciT130I CCWGG 3 cut(s) 14, 951, 1160
BcnI CCSGG 1 cut(s) 104
BcoDI GTCTC 2 cut(s) 1059, 1463
BfaI CTAG 3 cut(s) 258, 351, 1573
BfuAI ACCTGC 2 cut(s) 1172, 1302
BisI GCNGC 6 cut(s) 30, 220, 477, 558, 738, 1264
BlsI GCNGC 6 cut(s) 31, 221, 478, 559, 739, 1265
Bme1390I CCNGG 4 cut(s) 14, 104, 951, 1160
Bme18I GGWCC 1 cut(s) 166
BmeT110I CYCGRG 1 cut(s) 930
BmgBI CACGTC 1 cut(s) 485
BmgT120I GGNCC 6 cut(s) 84, 85, 145, 166, 610, 803
BmiI GGNNCC 2 cut(s) 86, 1509
BmrFI CCNGG 4 cut(s) 14, 104, 951, 1160
BmsI GCATC 5 cut(s) 661, 1098, 1364, 1372, 1568
BpiI GAAGAC 2 cut(s) 1067, 1161
BplI GAGNNNNNCTC 2 cut(s) 692, 724
BpmI CTGGAG 2 cut(s) 870, 1181
Bpu10I CCTNAGC 2 cut(s) 588, 1341
BpuEI CTTGAG 1 cut(s) 579
BpuMI CCSGG 1 cut(s) 104
BsaJI CCNNGG 2 cut(s) 192, 949
BsaWI WCCGGW 2 cut(s) 382, 1227
BsaXI ACNNNNNCTCC 2 cut(s) 1371, 1401
Bsc4I CCNNNNNNNGG 6 cut(s) 19, 109, 154, 955, 1123, 1176
Bse118I RCCGGY 2 cut(s) 133, 842
Bse1I ACTGG 2 cut(s) 741, 1252
Bse21I CCTNAGG 1 cut(s) 1122
Bse3DI GCAATG 1 cut(s) 441
BseAI TCCGGA 1 cut(s) 1227
BseBI CCWGG 3 cut(s) 14, 951, 1160
BseDI CCNNGG 2 cut(s) 192, 949
BseGI GGATG 5 cut(s) 583, 897, 1239, 1429, 1456
BseLI CCNNNNNNNGG 6 cut(s) 19, 109, 154, 955, 1123, 1176
BseMI GCAATG 1 cut(s) 441
BseMII CTCAG 3 cut(s) 901, 1113, 1332
BseNI ACTGG 2 cut(s) 741, 1252
BseRI GAGGAG 2 cut(s) 1358, 1392
BseSI GKGCMC 1 cut(s) 88
BseXI GCAGC 5 cut(s) 16, 231, 569, 724, 1250
BseYI CCCAGC 1 cut(s) 1281
BsgI GTGCAG 1 cut(s) 1249
Bsh1236I CGCG 1 cut(s) 404
BshFI GGCC 4 cut(s) 86, 147, 611, 805
BsiHKCI CYCGRG 1 cut(s) 930
BsiSI CCGG 5 cut(s) 103, 134, 383, 843, 1228
BslFI GGGAC 1 cut(s) 173
BslI CCNNNNNNNGG 6 cut(s) 19, 109, 154, 955, 1123, 1176
BsmAI GTCTC 2 cut(s) 1059, 1463
BsmFI GGGAC 1 cut(s) 173
BsnI GGCC 4 cut(s) 86, 147, 611, 805
BsoBI CYCGRG 1 cut(s) 930
Bsp120I GGGCCC 1 cut(s) 84
Bsp1286I GDGCHC 2 cut(s) 63, 88
Bsp13I TCCGGA 1 cut(s) 1227
Bsp143I GATC 4 cut(s) 580, 772, 944, 1277
Bsp19I CCATGG 1 cut(s) 192
BspACI CCGC 7 cut(s) 10, 43, 404, 476, 507, 674, 1039
BspANI GGCC 4 cut(s) 86, 147, 611, 805
BspCNI CTCAG 3 cut(s) 900, 1114, 1333
BspEI TCCGGA 1 cut(s) 1227
BspFNI CGCG 1 cut(s) 404
BspLI GGNNCC 2 cut(s) 86, 1509
BspMI ACCTGC 2 cut(s) 1172, 1302
BspPI GGATC 3 cut(s) 780, 939, 1272
BsrDI GCAATG 1 cut(s) 441
BsrFI RCCGGY 2 cut(s) 133, 842
BsrI ACTGG 2 cut(s) 741, 1252
BssAI RCCGGY 2 cut(s) 133, 842
BssECI CCNNGG 2 cut(s) 192, 949
BssMI GATC 4 cut(s) 580, 772, 944, 1277
BssT1I CCWWGG 1 cut(s) 192
Bst2UI CCWGG 3 cut(s) 14, 951, 1160
Bst4CI ACNGT 6 cut(s) 270, 522, 1053, 1258, 1499, 1544
Bst6I CTCTTC 4 cut(s) 486, 693, 726, 1266
BstC8I GCNNGC 2 cut(s) 45, 1287
BstDEI CTNAG 5 cut(s) 588, 887, 1122, 1307, 1341
BstDSI CCRYGG 1 cut(s) 192
BstENI CCTNNNNNAGG 1 cut(s) 1121
BstF5I GGATG 5 cut(s) 583, 897, 1239, 1429, 1456
BstFNI CGCG 1 cut(s) 404
BstHHI GCGC 1 cut(s) 404
BstKTI GATC 4 cut(s) 583, 775, 947, 1280
BstMAI GTCTC 2 cut(s) 1059, 1463
BstMBI GATC 4 cut(s) 580, 772, 944, 1277
BstMWI GCNNNNNNNGC 4 cut(s) 29, 1038, 1086, 1391
BstNI CCWGG 3 cut(s) 14, 951, 1160
BstSCI CCNGG 4 cut(s) 12, 102, 949, 1158
BstSLI GKGCMC 1 cut(s) 88
BstUI CGCG 1 cut(s) 404
BstV1I GCAGC 5 cut(s) 16, 231, 569, 724, 1250
BstV2I GAAGAC 2 cut(s) 1067, 1161
BstX2I RGATCY 2 cut(s) 944, 1277
BstYI RGATCY 2 cut(s) 944, 1277
Bsu36I CCTNAGG 1 cut(s) 1122
BsuRI GGCC 4 cut(s) 86, 147, 611, 805
BtgI CCRYGG 1 cut(s) 192
BtrI CACGTC 1 cut(s) 485
BtsCI GGATG 5 cut(s) 583, 897, 1239, 1429, 1456
BtsI GCAGTG 1 cut(s) 1392
BtsIMutI CAGTG 6 cut(s) 615, 855, 1130, 1245, 1392, 1561
BveI ACCTGC 2 cut(s) 1172, 1302
Cac8I GCNNGC 2 cut(s) 45, 1287
CfoI GCGC 1 cut(s) 404
Cfr10I RCCGGY 2 cut(s) 133, 842
Cfr13I GGNCC 6 cut(s) 84, 85, 145, 166, 610, 803
CseI GACGC 1 cut(s) 869
Csp6I GTAC 2 cut(s) 1046, 1435
CviAII CATG 1 cut(s) 193
CviQI GTAC 2 cut(s) 1046, 1435
DdeI CTNAG 5 cut(s) 588, 887, 1122, 1307, 1341
DpnI GATC 4 cut(s) 582, 774, 946, 1279
DpnII GATC 4 cut(s) 580, 772, 944, 1277
Eam1104I CTCTTC 4 cut(s) 486, 693, 726, 1266
EarI CTCTTC 4 cut(s) 486, 693, 726, 1266
Eco130I CCWWGG 1 cut(s) 192
Eco24I GRGCYC 2 cut(s) 63, 88
Eco32I GATATC 1 cut(s) 1480
Eco47I GGWCC 1 cut(s) 166
Eco57I CTGAAG 2 cut(s) 717, 1170
Eco81I CCTNAGG 1 cut(s) 1122
Eco88I CYCGRG 1 cut(s) 930
EcoNI CCTNNNNNAGG 1 cut(s) 1121
EcoO109I RGGNCCY 2 cut(s) 85, 803
EcoRII CCWGG 3 cut(s) 12, 949, 1158
EcoRV GATATC 1 cut(s) 1480
EcoT14I CCWWGG 1 cut(s) 192
EcoT38I GRGCYC 2 cut(s) 63, 88
ErhI CCWWGG 1 cut(s) 192
FaeI CATG 1 cut(s) 196
FalI AAGNNNNNCTT 2 cut(s) 588, 620
FaqI GGGAC 1 cut(s) 173
FatI CATG 1 cut(s) 192
FauI CCCGC 1 cut(s) 36
Fnu4HI GCNGC 6 cut(s) 30, 220, 477, 558, 738, 1264
FokI GGATG 5 cut(s) 590, 904, 1226, 1416, 1463
FriOI GRGCYC 2 cut(s) 63, 88
Fsp4HI GCNGC 6 cut(s) 30, 220, 477, 558, 738, 1264
FspBI CTAG 3 cut(s) 258, 351, 1573
GlaI GCGC 1 cut(s) 403
GluI GCNGC 6 cut(s) 30, 220, 477, 558, 738, 1264
GsaI CCCAGC 1 cut(s) 1285
GsuI CTGGAG 2 cut(s) 870, 1181
HaeIII GGCC 4 cut(s) 86, 147, 611, 805
HapII CCGG 5 cut(s) 103, 134, 383, 843, 1228
HgaI GACGC 1 cut(s) 869
HhaI GCGC 1 cut(s) 404
Hin1II CATG 1 cut(s) 196
Hin6I GCGC 1 cut(s) 402
HinP1I GCGC 1 cut(s) 402
HincII GTYRAC 3 cut(s) 127, 412, 786
HindII GTYRAC 3 cut(s) 127, 412, 786
HindIII AAGCTT 2 cut(s) 246, 1087
HinfI GANTC 6 cut(s) 113, 128, 354, 548, 707, 1127
HpaI GTTAAC 1 cut(s) 786
HpaII CCGG 5 cut(s) 103, 134, 383, 843, 1228
HphI GGTGA 3 cut(s) 123, 1345, 1511
Hpy166II GTNNAC 4 cut(s) 127, 285, 412, 786
Hpy188I TCNGA 5 cut(s) 100, 553, 1200, 1360, 1477
Hpy188III TCNNGA 6 cut(s) 351, 515, 596, 728, 889, 1228
Hpy8I GTNNAC 4 cut(s) 127, 285, 412, 786
HpyAV CCTTC 7 cut(s) 357, 372, 453, 812, 986, 1183, 1384
HpyCH4III ACNGT 6 cut(s) 270, 522, 1053, 1258, 1499, 1544
HpyCH4IV ACGT 1 cut(s) 484
HpyCH4V TGCA 8 cut(s) 67, 219, 439, 722, 1266, 1289, 1385, 1559
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 1038, 1086, 1391
HpyF3I CTNAG 5 cut(s) 588, 887, 1122, 1307, 1341
HpySE526I ACGT 1 cut(s) 484
Hsp92II CATG 1 cut(s) 196
HspAI GCGC 1 cut(s) 402
Kpn2I TCCGGA 1 cut(s) 1227
KspAI GTTAAC 1 cut(s) 786
Kzo9I GATC 4 cut(s) 580, 772, 944, 1277
LmnI GCTCC 3 cut(s) 572, 1345, 1507
Lsp1109I GCAGC 5 cut(s) 16, 231, 569, 724, 1250
LweI GCATC 5 cut(s) 661, 1098, 1364, 1372, 1568
MaeI CTAG 3 cut(s) 258, 351, 1573
MaeII ACGT 1 cut(s) 484
MaeIII GTNAC 4 cut(s) 270, 835, 882, 1252
MalI GATC 4 cut(s) 582, 774, 946, 1279
MboI GATC 4 cut(s) 580, 772, 944, 1277
MboII GAAGA 8 cut(s) 503, 680, 710, 743, 1067, 1163, 1166, 1283
MflI RGATCY 2 cut(s) 944, 1277
MhlI GDGCHC 2 cut(s) 63, 88
MluCI AATT 5 cut(s) 316, 471, 755, 966, 1212
MlyI GAGTC 3 cut(s) 122, 122, 701
MmeI TCCRAC 2 cut(s) 504, 525
MroI TCCGGA 1 cut(s) 1227
MseI TTAA 5 cut(s) 90, 785, 969, 1062, 1365
MslI CAYNNNNRTG 1 cut(s) 1487
MspA1I CMGCKG 2 cut(s) 230, 560
MspI CCGG 5 cut(s) 103, 134, 383, 843, 1228
MspR9I CCNGG 4 cut(s) 14, 104, 951, 1160
MvaI CCWGG 3 cut(s) 14, 951, 1160
MvnI CGCG 1 cut(s) 404
MwoI GCNNNNNNNGC 4 cut(s) 29, 1038, 1086, 1391
NciI CCSGG 1 cut(s) 104
NcoI CCATGG 1 cut(s) 192
NdeII GATC 4 cut(s) 580, 772, 944, 1277
NlaIII CATG 1 cut(s) 196
NlaIV GGNNCC 2 cut(s) 86, 1509
NmeAIII GCCGAG 1 cut(s) 565
OliI CACNNNNGTG 1 cut(s) 1487
PaeR7I CTCGAG 1 cut(s) 930
PaqCI CACCTGC 1 cut(s) 1172
PfeI GAWTC 3 cut(s) 354, 548, 1127
PflFI GACNNNGTC 1 cut(s) 104
PkrI GCNGC 6 cut(s) 31, 221, 478, 559, 739, 1265
PleI GAGTC 3 cut(s) 121, 122, 701
PpsI GAGTC 3 cut(s) 121, 122, 701
Psp6I CCWGG 3 cut(s) 12, 949, 1158
PspFI CCCAGC 1 cut(s) 1281
PspGI CCWGG 3 cut(s) 12, 949, 1158
PspN4I GGNNCC 2 cut(s) 86, 1509
PspOMI GGGCCC 1 cut(s) 84
PspPI GGNCC 6 cut(s) 84, 85, 145, 166, 610, 803
PspXI VCTCGAGB 1 cut(s) 930
PsuI RGATCY 2 cut(s) 944, 1277
PsyI GACNNNGTC 1 cut(s) 104
PvuII CAGCTG 2 cut(s) 230, 560
RsaI GTAC 2 cut(s) 1047, 1436
RsaNI GTAC 2 cut(s) 1046, 1435
RseI CAYNNNNRTG 1 cut(s) 1487
SaqAI TTAA 5 cut(s) 90, 785, 969, 1062, 1365
SatI GCNGC 6 cut(s) 30, 220, 477, 558, 738, 1264
Sau3AI GATC 4 cut(s) 580, 772, 944, 1277
Sau96I GGNCC 6 cut(s) 84, 85, 145, 166, 610, 803
SchI GAGTC 3 cut(s) 122, 122, 701
ScrFI CCNGG 4 cut(s) 14, 104, 951, 1160
SduI GDGCHC 2 cut(s) 63, 88
SfaNI GCATC 5 cut(s) 661, 1098, 1364, 1372, 1568
Sfr274I CTCGAG 1 cut(s) 930
SgrAI CRCCGGYG 1 cut(s) 133
SinI GGWCC 1 cut(s) 166
SlaI CTCGAG 1 cut(s) 930
SmiMI CAYNNNNRTG 1 cut(s) 1487
SmlI CTYRAG 2 cut(s) 594, 930
SmoI CTYRAG 2 cut(s) 594, 930
Sse9I AATT 5 cut(s) 316, 471, 755, 966, 1212
SsiI CCGC 7 cut(s) 10, 43, 404, 476, 507, 674, 1039
SspMI CTAG 3 cut(s) 258, 351, 1573
StyD4I CCNGG 4 cut(s) 12, 102, 949, 1158
StyI CCWWGG 1 cut(s) 192
TaaI ACNGT 6 cut(s) 270, 522, 1053, 1258, 1499, 1544
TaiI ACGT 1 cut(s) 487
TaqI TCGA 5 cut(s) 51, 183, 583, 931, 984
TasI AATT 5 cut(s) 316, 471, 755, 966, 1212
TauI GCSGC 1 cut(s) 479
TfiI GAWTC 3 cut(s) 354, 548, 1127
Tru1I TTAA 5 cut(s) 90, 785, 969, 1062, 1365
Tru9I TTAA 5 cut(s) 90, 785, 969, 1062, 1365
TscAI CASTG 6 cut(s) 622, 862, 1137, 1252, 1392, 1561
TseI GCWGC 5 cut(s) 29, 219, 557, 737, 1263
TspDTI ATGAA 2 cut(s) 191, 1562
TspGWI ACGGA 1 cut(s) 1422
TspRI CASTG 6 cut(s) 622, 862, 1137, 1252, 1392, 1561
Tth111I GACNNNGTC 1 cut(s) 104
VpaK11BI GGWCC 1 cut(s) 166
XagI CCTNNNNNAGG 1 cut(s) 1121
XbaI TCTAGA 1 cut(s) 350
XhoI CTCGAG 1 cut(s) 930
XspI CTAG 3 cut(s) 258, 351, 1573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.