Domain Homologous to E6-AP Carboxyl Terminus with
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0382171 RchiOBHm_Chr1g0382181 RchiOBHm_Chr1g0382301 |
| rosa_laevigata | RLG00000012245 |
| rosa_multiflora | Rmu_sc0000110.1_g000036 Rmu_sc0007558.1_g000004 Rmu_sc0038879.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00278250 |
| rosa_samantha | Rh1AG456700 Rh1AG456800 Rh1AG456900 Rh1AG457300 Rh1AG458000 Rh1AG458100 Rh1BG413700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 138 |
| AclWI | GGATC | 1 cut(s) | 161 |
| AcyI | GRCGYC | 1 cut(s) | 135 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 300 |
| AgsI | TTSAA | 1 cut(s) | 49 |
| AluBI | AGCT | 2 cut(s) | 126, 255 |
| AluI | AGCT | 2 cut(s) | 126, 255 |
| AlwI | GGATC | 1 cut(s) | 161 |
| ApeKI | GCWGC | 1 cut(s) | 201 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 18, 50 |
| AspS9I | GGNCC | 1 cut(s) | 290 |
| AsuHPI | GGTGA | 1 cut(s) | 28 |
| AvaII | GGWCC | 1 cut(s) | 290 |
| BbvI | GCAGC | 1 cut(s) | 188 |
| BccI | CCATC | 2 cut(s) | 64, 242 |
| BisI | GCNGC | 1 cut(s) | 202 |
| BlsI | GCNGC | 1 cut(s) | 203 |
| Bme18I | GGWCC | 1 cut(s) | 290 |
| BmgT120I | GGNCC | 1 cut(s) | 290 |
| BmiI | GGNNCC | 2 cut(s) | 16, 292 |
| BmrI | ACTGGG | 1 cut(s) | 288 |
| BmuI | ACTGGG | 1 cut(s) | 288 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 38 |
| BsaBI | GATNNNNATC | 1 cut(s) | 158 |
| BsaHI | GRCGYC | 1 cut(s) | 135 |
| BsaJI | CCNNGG | 1 cut(s) | 10 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 300 |
| Bse1I | ACTGG | 1 cut(s) | 294 |
| Bse3DI | GCAATG | 1 cut(s) | 316 |
| Bse8I | GATNNNNATC | 1 cut(s) | 158 |
| BseDI | CCNNGG | 1 cut(s) | 10 |
| BseGI | GGATG | 2 cut(s) | 56, 253 |
| BseJI | GATNNNNATC | 1 cut(s) | 158 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 300 |
| BseMI | GCAATG | 1 cut(s) | 316 |
| BseNI | ACTGG | 1 cut(s) | 294 |
| BseXI | GCAGC | 1 cut(s) | 188 |
| BslFI | GGGAC | 3 cut(s) | 89, 243, 276 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 300 |
| BsmFI | GGGAC | 3 cut(s) | 89, 243, 276 |
| Bsp143I | GATC | 1 cut(s) | 153 |
| BspLI | GGNNCC | 2 cut(s) | 16, 292 |
| BspPI | GGATC | 1 cut(s) | 161 |
| BsrDI | GCAATG | 1 cut(s) | 316 |
| BsrI | ACTGG | 1 cut(s) | 294 |
| BssECI | CCNNGG | 1 cut(s) | 10 |
| BssMI | GATC | 1 cut(s) | 153 |
| BssNI | GRCGYC | 1 cut(s) | 135 |
| Bst4CI | ACNGT | 1 cut(s) | 167 |
| BstACI | GRCGYC | 1 cut(s) | 135 |
| BstF5I | GGATG | 2 cut(s) | 56, 253 |
| BstKTI | GATC | 1 cut(s) | 156 |
| BstMBI | GATC | 1 cut(s) | 153 |
| BstNSI | RCATGY | 2 cut(s) | 186, 234 |
| BstV1I | GCAGC | 1 cut(s) | 188 |
| BstX2I | RGATCY | 1 cut(s) | 153 |
| BstYI | RGATCY | 1 cut(s) | 153 |
| BtsCI | GGATG | 2 cut(s) | 56, 253 |
| BtsIMutI | CAGTG | 2 cut(s) | 301, 324 |
| Cfr13I | GGNCC | 1 cut(s) | 290 |
| CviAII | CATG | 3 cut(s) | 173, 183, 231 |
| CviJI | RGCY | 4 cut(s) | 17, 45, 126, 255 |
| CviKI_1 | RGCY | 4 cut(s) | 17, 45, 126, 255 |
| DpnI | GATC | 1 cut(s) | 155 |
| DpnII | GATC | 1 cut(s) | 153 |
| Eco47I | GGWCC | 1 cut(s) | 290 |
| FaeI | CATG | 3 cut(s) | 176, 186, 234 |
| FaiI | YATR | 6 cut(s) | 174, 184, 210, 212, 232, 285 |
| FaqI | GGGAC | 3 cut(s) | 89, 243, 276 |
| FatI | CATG | 3 cut(s) | 172, 182, 230 |
| Fnu4HI | GCNGC | 1 cut(s) | 202 |
| FokI | GGATG | 2 cut(s) | 43, 260 |
| Fsp4HI | GCNGC | 1 cut(s) | 202 |
| GluI | GCNGC | 1 cut(s) | 202 |
| Hin1I | GRCGYC | 1 cut(s) | 135 |
| Hin1II | CATG | 3 cut(s) | 176, 186, 234 |
| HphI | GGTGA | 1 cut(s) | 28 |
| Hpy188I | TCNGA | 1 cut(s) | 14 |
| Hpy188III | TCNNGA | 1 cut(s) | 60 |
| HpyAV | CCTTC | 2 cut(s) | 92, 235 |
| HpyCH4III | ACNGT | 1 cut(s) | 167 |
| HpyCH4IV | ACGT | 1 cut(s) | 135 |
| HpyCH4V | TGCA | 6 cut(s) | 204, 214, 234, 280, 309, 322 |
| HpySE526I | ACGT | 1 cut(s) | 135 |
| Hsp92I | GRCGYC | 1 cut(s) | 135 |
| Hsp92II | CATG | 3 cut(s) | 176, 186, 234 |
| Kzo9I | GATC | 1 cut(s) | 153 |
| LmnI | GCTCC | 1 cut(s) | 14 |
| LpnPI | CCDG | 2 cut(s) | 73, 307 |
| Lsp1109I | GCAGC | 1 cut(s) | 188 |
| MaeII | ACGT | 1 cut(s) | 135 |
| MaeIII | GTNAC | 2 cut(s) | 34, 51 |
| MalI | GATC | 1 cut(s) | 155 |
| MboI | GATC | 1 cut(s) | 153 |
| MboII | GAAGA | 2 cut(s) | 148, 266 |
| MflI | RGATCY | 1 cut(s) | 153 |
| MnlI | CCTC | 3 cut(s) | 20, 66, 79 |
| MslI | CAYNNNNRTG | 1 cut(s) | 61 |
| NdeII | GATC | 1 cut(s) | 153 |
| NlaIII | CATG | 3 cut(s) | 176, 186, 234 |
| NlaIV | GGNNCC | 2 cut(s) | 16, 292 |
| NmuCI | GTSAC | 2 cut(s) | 34, 51 |
| NspI | RCATGY | 2 cut(s) | 186, 234 |
| PkrI | GCNGC | 1 cut(s) | 203 |
| PspN4I | GGNNCC | 2 cut(s) | 16, 292 |
| PspPI | GGNCC | 1 cut(s) | 290 |
| PsuI | RGATCY | 1 cut(s) | 153 |
| RseI | CAYNNNNRTG | 1 cut(s) | 61 |
| SatI | GCNGC | 1 cut(s) | 202 |
| Sau3AI | GATC | 1 cut(s) | 153 |
| Sau96I | GGNCC | 1 cut(s) | 290 |
| SetI | ASST | 3 cut(s) | 128, 138, 257 |
| SinI | GGWCC | 1 cut(s) | 290 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 61 |
| TaaI | ACNGT | 1 cut(s) | 167 |
| TaiI | ACGT | 1 cut(s) | 138 |
| TscAI | CASTG | 2 cut(s) | 301, 324 |
| TseFI | GTSAC | 2 cut(s) | 34, 51 |
| TseI | GCWGC | 1 cut(s) | 201 |
| Tsp45I | GTSAC | 2 cut(s) | 34, 51 |
| TspDTI | ATGAA | 3 cut(s) | 82, 148, 161 |
| TspRI | CASTG | 2 cut(s) | 301, 324 |
| VpaK11BI | GGWCC | 1 cut(s) | 290 |
| XceI | RCATGY | 2 cut(s) | 186, 234 |
| ZraI | GACGTC | 1 cut(s) | 136 |