Serine arginine repetitive matrix protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0382171 RchiOBHm_Chr1g0382181 RchiOBHm_Chr1g0382301 |
| rosa_laevigata | RLG00000012245 |
| rosa_multiflora | Rmu_sc0000110.1_g000036 Rmu_sc0007558.1_g000004 Rmu_sc0038879.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00278250 |
| rosa_samantha | Rh1AG456700 Rh1AG456800 Rh1AG456900 Rh1AG457300 Rh1AG458000 Rh1AG458100 Rh1BG413700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 283 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 38 |
| AgsI | TTSAA | 1 cut(s) | 147 |
| AluBI | AGCT | 3 cut(s) | 268, 308, 323 |
| AluI | AGCT | 3 cut(s) | 268, 308, 323 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 116, 148 |
| AsuHPI | GGTGA | 1 cut(s) | 126 |
| BccI | CCATC | 2 cut(s) | 162, 272 |
| BmiI | GGNNCC | 1 cut(s) | 114 |
| BmrI | ACTGGG | 1 cut(s) | 300 |
| BmuI | ACTGGG | 1 cut(s) | 300 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 104, 136 |
| BpuEI | CTTGAG | 1 cut(s) | 309 |
| BsaJI | CCNNGG | 1 cut(s) | 108 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 38 |
| Bse1I | ACTGG | 1 cut(s) | 295 |
| Bse3DI | GCAATG | 1 cut(s) | 106 |
| BseDI | CCNNGG | 1 cut(s) | 108 |
| BseGI | GGATG | 1 cut(s) | 154 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 38 |
| BseMI | GCAATG | 1 cut(s) | 106 |
| BseMII | CTCAG | 2 cut(s) | 24, 168 |
| BseNI | ACTGG | 1 cut(s) | 295 |
| BslFI | GGGAC | 2 cut(s) | 187, 236 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 38 |
| BsmFI | GGGAC | 2 cut(s) | 187, 236 |
| BspCNI | CTCAG | 2 cut(s) | 25, 169 |
| BspLI | GGNNCC | 1 cut(s) | 114 |
| BsrDI | GCAATG | 1 cut(s) | 106 |
| BsrI | ACTGG | 1 cut(s) | 295 |
| BssECI | CCNNGG | 1 cut(s) | 108 |
| Bst6I | CTCTTC | 1 cut(s) | 176 |
| BstDEI | CTNAG | 2 cut(s) | 33, 177 |
| BstF5I | GGATG | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 28 |
| BstNSI | RCATGY | 2 cut(s) | 131, 234 |
| BtsCI | GGATG | 1 cut(s) | 154 |
| CseI | GACGC | 1 cut(s) | 11 |
| Csp6I | GTAC | 1 cut(s) | 282 |
| CviAII | CATG | 2 cut(s) | 128, 231 |
| CviJI | RGCY | 6 cut(s) | 14, 115, 143, 268, 308, 323 |
| CviKI_1 | RGCY | 6 cut(s) | 14, 115, 143, 268, 308, 323 |
| CviQI | GTAC | 1 cut(s) | 282 |
| DdeI | CTNAG | 2 cut(s) | 33, 177 |
| Eam1104I | CTCTTC | 1 cut(s) | 176 |
| EarI | CTCTTC | 1 cut(s) | 176 |
| Eco32I | GATATC | 1 cut(s) | 263 |
| EcoRV | GATATC | 1 cut(s) | 263 |
| FaeI | CATG | 2 cut(s) | 131, 234 |
| FaiI | YATR | 4 cut(s) | 39, 129, 232, 236 |
| FaqI | GGGAC | 2 cut(s) | 187, 236 |
| FatI | CATG | 2 cut(s) | 127, 230 |
| FokI | GGATG | 1 cut(s) | 141 |
| HgaI | GACGC | 1 cut(s) | 11 |
| Hin1II | CATG | 2 cut(s) | 131, 234 |
| HindIII | AAGCTT | 1 cut(s) | 306 |
| HinfI | GANTC | 1 cut(s) | 224 |
| HphI | GGTGA | 1 cut(s) | 126 |
| Hpy188I | TCNGA | 2 cut(s) | 45, 112 |
| Hpy188III | TCNNGA | 3 cut(s) | 158, 221, 275 |
| HpyAV | CCTTC | 1 cut(s) | 190 |
| HpyCH4V | TGCA | 1 cut(s) | 230 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 28 |
| HpyF3I | CTNAG | 2 cut(s) | 33, 177 |
| Hsp92II | CATG | 2 cut(s) | 131, 234 |
| LmnI | GCTCC | 1 cut(s) | 112 |
| LpnPI | CCDG | 4 cut(s) | 45, 171, 276, 288 |
| MaeIII | GTNAC | 2 cut(s) | 132, 149 |
| MboII | GAAGA | 3 cut(s) | 61, 193, 263 |
| MfeI | CAATTG | 2 cut(s) | 17, 26 |
| MluCI | AATT | 4 cut(s) | 17, 26, 59, 69 |
| MlyI | GAGTC | 1 cut(s) | 218 |
| MmeI | TCCRAC | 2 cut(s) | 23, 277 |
| MnlI | CCTC | 6 cut(s) | 39, 71, 118, 164, 177, 251 |
| MseI | TTAA | 1 cut(s) | 62 |
| MslI | CAYNNNNRTG | 1 cut(s) | 159 |
| MunI | CAATTG | 2 cut(s) | 17, 26 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 28 |
| NlaIII | CATG | 2 cut(s) | 131, 234 |
| NlaIV | GGNNCC | 1 cut(s) | 114 |
| NmuCI | GTSAC | 2 cut(s) | 132, 149 |
| NspI | RCATGY | 2 cut(s) | 131, 234 |
| PleI | GAGTC | 1 cut(s) | 218 |
| PpsI | GAGTC | 1 cut(s) | 218 |
| PspN4I | GGNNCC | 1 cut(s) | 114 |
| RsaI | GTAC | 1 cut(s) | 283 |
| RsaNI | GTAC | 1 cut(s) | 282 |
| RseI | CAYNNNNRTG | 1 cut(s) | 159 |
| SaqAI | TTAA | 1 cut(s) | 62 |
| SchI | GAGTC | 1 cut(s) | 218 |
| SetI | ASST | 3 cut(s) | 270, 310, 325 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 159 |
| SmlI | CTYRAG | 1 cut(s) | 324 |
| SmoI | CTYRAG | 1 cut(s) | 324 |
| Sse9I | AATT | 4 cut(s) | 17, 26, 59, 69 |
| TasI | AATT | 4 cut(s) | 17, 26, 59, 69 |
| Tru1I | TTAA | 1 cut(s) | 62 |
| Tru9I | TTAA | 1 cut(s) | 62 |
| TseFI | GTSAC | 2 cut(s) | 132, 149 |
| Tsp45I | GTSAC | 2 cut(s) | 132, 149 |
| TspDTI | ATGAA | 1 cut(s) | 180 |
| XceI | RCATGY | 2 cut(s) | 131, 234 |