Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000160.1

Orthogroup ID

OG0013419

Physical Location & Seq

Genomic Coordinates Reverse (-)

72777 .. 75194

Gene Structure 2418 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

atggcgacgagagggagcagatcagagaaggtcaagaggattttctaccaatttgacgccaaccatgacggagggctcaaccgggaggaaatggcggcgctcgtggtggccgtaaaccctagggtcaagttcagcgacgagcagatcaatgccattttggacgaggtgtttcggacctacggcgacttcatcgacggggataaggggctgacgtatgagggcctgttgcggacgtacgacgacggagcgggcgacgtggaccgtgacttcgacgcgctagggttggagctgagtctggatgaggccaaaggggcttccatggcggcggaggcgtcgtcgtcgtcgatagtggacgagcgcagcgccgagtcgcagaagaagcagcggacggcggcgtgggcggtgtcgccgaaccacgggatcgtgttcgacgacacgtggaagattgtggacgatttggagattctggtcaagaggttgaaggcgaagcaggcggggaataataataataatggcaaggtcaagggtgagaatctggactcgtattcggaggctgggtggtctagagagttggggccttcttcggagatttcggagaagagggtgttttgggaagagtctgggcatgattatgctctgtttgtgaaggaattgggggtgctcaggagccgtgccgacggagcaaggtcgagggagcaagctttcgatggacacatggcaattgggagggttttgtatgagcaccagctgtttaaggaagctttggttagtttcaagcgagcctgtgagttgcaaccggtggatgttaggccacacttcagggctgggaattgcttgtatgttcttggcaggtacaaagagtctaaagaggagtttctgctcgctcttgaggccgccgaggccggtggcaatcagtgggcctatttgcttccacagatttatgtcaatctcgggattgctgttgaaggtgaaggtatggttttaagtgcttgcgagtattatagggaagctgctatactttgtcccactcattttagagccttgaaacttttggggagtgccttgtttggggttggggaatatagggcagctgttaaggccttggaagagtccattttcatgaaaccagactatgccgatgcacattgtgatttggcttcggctttgcatgctctgggggaggatgagagggcaatcgaggtttttcagaaagccattgatttgaaacccggccatgttgatgccttgtacaatttgggtggcctttatatggacttgggaaggttccagagagcttctgagatgtatactagggttttagctgtgtggccaaaccattggcgtgctcagctcaacagggctgtgtccttgttgggagctagggaaactgaggatgctaagaaagctttgaaggaagcattgaaaatgaccaacagggttgaattgcatgatgccattgcacatttgaagcagctgcagaagaagaagaaggtgaaggcaaatggggggggtgccaatggggaaggttcctttgtcactgtggacgctacaaaatttaaggccgttggggagaaaacaacattgaggcaagacttagccattgcacttgagattagggcttttcagaggattaccaggttgagtcgttgtgatgtggatctccttagaagggagatgagtgatggtgatgtaccagtgtcgtattcaggtacgggtgtcccgcagaggtccatacgcaagcctaacttggaagaaattctccgcaggttgcttaatttcctaaagcctgagacttttcaaggagctgtgaaaaccataaacgagagaatactctctgtttttgatgatacaggtgctggtagggtggacttgggcatgttttttgctgttctggcccctatttgcagtggcccgccagaaaagcgcaagcgacttgcatttgatgcgctcttgtggcgccctgtgaacgaaggtggtggttctcagataagaaaagatgacgccactaaatatatcaaactgttgagagctatatatgtcccttcccatggtgttagtgagatgctggaactccatggagaaacagatccttcaacaatgtcttacacagagtttcttgtcatgtttaacgaccctgattggggttttggtatcatgtccacgctgttgaagcttgaaactggggacaggaatcgccatggtaatcatgtctgttcagtttgccgctatccaattattgggtctcgctttaaggagataaaatctcatttcagtttgtgcaatcaatgctacagcgagggaaaagttcctcctgcctataagcaggaagagtacaagttcagagaatatggaactgagggcgaagccatgaaagacaagtgcaagtgctttacattgcaagcccataatgacccgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0009506 GO:0012505 GO:0016020 GO:0030054 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EF-hand_5 TPR_1 TPR_11 TPR_16 TPR_2 TPR_8

Protein Analysis

805

Amino Acids

90.04

Weight (kDa)

6.31

Isoelectric Point (pI)

35.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	351 - 411	3e-10	Tetratricopeptide repeat
TPR_11	PF13414	388 - 427	5.3e-08	TPR repeat
TPR_19	PF14559	397 - 440	4.6e-07	Tetratricopeptide repeat
TPR_1	PF00515	414 - 446	3.2e-06	Tetratricopeptide repeat
TPR_12	PF13424	415 - 477	4.4e-06	Tetratricopeptide repeat
TPR_16	PF13432	417 - 475	1.1e-07	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013419)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05150 AT2G32450
fragaria_vesca	FvH4_2g39050
malus_domestica	MD08G1018000.v1.1 MD15G1017300.v1.1
prunus_persica	Prupe.1G370600_v2.0.a1
pyrus_communis	pycom08g01560 pycom15g01520
rosa_chinensis	RchiOBHm_Chr6g0302151
rosa_laevigata	RLG00000011191
rosa_multiflora	Rmu_ssc0000160.1_g000016
rosa_roxburghii	Rroxscaffold_7G00166040
rosa_rugosa	Rorug06G0312600
rosa_samantha	Rh6AG425100 Rh6BG477300 Rh6CG438000 Rh6DG425000
rosa_wichuraiana	Rw6G036820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	840, 1755
AccB1I	GGYRCC	2 cut(s)	1511, 1956
AccB7I	CCANNNNNTGG	1 cut(s)	2237
AccBSI	CCGCTC	1 cut(s)	248
AccI	GTMKAC	1 cut(s)	1307
AccII	CGCG	1 cut(s)	275
AclWI	GGATC	3 cut(s)	428, 1665, 2081
AcoI	YGGCCR	3 cut(s)	108, 1231, 1328
AcsI	RAATTY	2 cut(s)	1553, 1755
AcuI	CTGAAG	1 cut(s)	802
AcvI	CACGTG	1 cut(s)	438
AcyI	GRCGYC	4 cut(s)	57, 332, 1957, 2001
AdeI	CACNNNGTG	1 cut(s)	1148
AfaI	GTAC	6 cut(s)	236, 854, 1250, 1692, 1711, 2333
AfiI	CCNNNNNNNGG	8 cut(s)	416, 1068, 1270, 1669, 2048, 2140, 2141, 2237
AflIII	ACRYGT	1 cut(s)	435
AgeI	ACCGGT	1 cut(s)	796
AjiI	CACGTC	1 cut(s)	256
AjnI	CCWGG	1 cut(s)	1634
Alw21I	GWGCWC	3 cut(s)	663, 744, 1348
Alw26I	GTCTC	2 cut(s)	1784, 2247
AlwI	GGATC	3 cut(s)	428, 1665, 2081
AlwNI	CAGNNNCTG	1 cut(s)	1856
Ama87I	CYCGRG	1 cut(s)	950
ApeKI	GCWGC	6 cut(s)	360, 382, 1010, 1088, 1471, 1474
ApoI	RAATTY	2 cut(s)	1553, 1755
ArsI	GACNNNNNNTTYG	2 cut(s)	251, 283
AsiGI	ACCGGT	1 cut(s)	796
Asp700I	GAANNNNTTC	1 cut(s)	1755
AspA2I	CCTAGG	1 cut(s)	119
AspLEI	GCGC	7 cut(s)	100, 277, 360, 365, 1926, 1948, 1959
AspS9I	GGNCC	8 cut(s)	174, 220, 259, 575, 918, 1728, 1894, 1910
AsuC2I	CCSGG	2 cut(s)	83, 1230
AsuHPI	GGTGA	4 cut(s)	539, 980, 1504, 1697
AvaI	CYCGRG	1 cut(s)	950
AvaII	GGWCC	3 cut(s)	174, 259, 1728
AvrII	CCTAGG	1 cut(s)	119
BaeI	ACNNNNGTAYC	2 cut(s)	1701, 1734
BalI	TGGCCA	1 cut(s)	1330
BanI	GGYRCC	2 cut(s)	1511, 1956
BanII	GRGCYC	1 cut(s)	78
BarI	GAAGNNNNNNTAC	2 cut(s)	999, 1031
BauI	CACGAG	1 cut(s)	101
BbrPI	CACGTG	1 cut(s)	438
Bbv12I	GWGCWC	3 cut(s)	663, 744, 1348
BbvI	GCAGC	6 cut(s)	372, 394, 997, 1100, 1461, 1483
BccI	CCATC	2 cut(s)	701, 1676
BceAI	ACGGC	5 cut(s)	95, 196, 405, 654, 1547
BciT130I	CCWGG	1 cut(s)	1636
BcnI	CCSGG	2 cut(s)	83, 1230
BcoDI	GTCTC	2 cut(s)	1784, 2247
BfaI	CTAG	5 cut(s)	120, 278, 564, 1311, 1380
BfmI	CTRYAG	2 cut(s)	1475, 2290
BfoI	RGCGCY	3 cut(s)	101, 366, 1960
BfuAI	ACCTGC	2 cut(s)	840, 1755
BglI	GCCNNNNNGGC	2 cut(s)	311, 899
BlnI	CCTAGG	1 cut(s)	119
BlpI	GCTNAGC	1 cut(s)	1347
Bme1390I	CCNGG	3 cut(s)	83, 1230, 1636
Bme18I	GGWCC	3 cut(s)	174, 259, 1728
BmeT110I	CYCGRG	1 cut(s)	950
BmgBI	CACGTC	1 cut(s)	256
BmgT120I	GGNCC	8 cut(s)	174, 220, 259, 575, 918, 1728, 1894, 1910
BmiI	GGNNCC	7 cut(s)	576, 668, 1286, 1513, 1528, 1896, 1958
BmrFI	CCNGG	3 cut(s)	83, 1230, 1636
BmrI	ACTGGG	1 cut(s)	2190
BmsI	GCATC	6 cut(s)	1129, 1231, 1384, 1441, 1933, 2052
BmuI	ACTGGG	1 cut(s)	2190
Bpu10I	CCTNAGC	1 cut(s)	662
Bpu1102I	GCTNAGC	1 cut(s)	1347
BpuEI	CTTGAG	2 cut(s)	908, 1628
BpuMI	CCSGG	2 cut(s)	83, 1230
BsaAI	YACGTR	1 cut(s)	438
BsaBI	GATNNNNATC	1 cut(s)	1656
BsaHI	GRCGYC	4 cut(s)	57, 332, 1957, 2001
BsaI	GGTCTC	1 cut(s)	2247
BsaJI	CCNNGG	8 cut(s)	119, 318, 415, 897, 1101, 2047, 2074, 2197
BsaWI	WCCGGW	1 cut(s)	796
BsaXI	ACNNNNNCTCC	4 cut(s)	320, 350, 542, 572
Bsc4I	CCNNNNNNNGG	8 cut(s)	416, 1068, 1270, 1669, 2048, 2140, 2141, 2237
Bse118I	RCCGGY	2 cut(s)	796, 902
Bse1I	ACTGG	2 cut(s)	1694, 2185
Bse3DI	GCAATG	3 cut(s)	1455, 1599, 2393
Bse8I	GATNNNNATC	1 cut(s)	1656
BseBI	CCWGG	1 cut(s)	1636
BseDI	CCNNGG	8 cut(s)	119, 318, 415, 897, 1101, 2047, 2074, 2197
BseGI	GGATG	4 cut(s)	304, 808, 1189, 1399
BseJI	GATNNNNATC	1 cut(s)	1656
BseLI	CCNNNNNNNGG	8 cut(s)	416, 1068, 1270, 1669, 2048, 2140, 2141, 2237
BseMI	GCAATG	3 cut(s)	1455, 1599, 2393
BseMII	CTCAG	8 cut(s)	281, 676, 1290, 1361, 1380, 1779, 1997, 2346
BseNI	ACTGG	2 cut(s)	1694, 2185
BseRI	GAGGAG	1 cut(s)	884
BseXI	GCAGC	6 cut(s)	372, 394, 997, 1100, 1461, 1483
BseYI	CCCAGC	2 cut(s)	554, 824
Bsh1236I	CGCG	1 cut(s)	275
BshNI	GGYRCC	2 cut(s)	1511, 1956
BshTI	ACCGGT	1 cut(s)	796
BsiHKAI	GWGCWC	3 cut(s)	663, 744, 1348
BsiHKCI	CYCGRG	1 cut(s)	950
BsiSI	CCGG	4 cut(s)	82, 797, 903, 1230
BsiWI	CGTACG	1 cut(s)	234
BslFI	GGGAC	4 cut(s)	1008, 1703, 2024, 2198
BslI	CCNNNNNNNGG	8 cut(s)	416, 1068, 1270, 1669, 2048, 2140, 2141, 2237
BsmAI	GTCTC	2 cut(s)	1784, 2247
BsmFI	GGGAC	4 cut(s)	1008, 1703, 2024, 2198
Bso31I	GGTCTC	1 cut(s)	2247
BsoBI	CYCGRG	1 cut(s)	950
Bsp1286I	GDGCHC	4 cut(s)	78, 663, 744, 1348
Bsp1407I	TGTACA	1 cut(s)	1248
Bsp143I	GATC	5 cut(s)	20, 144, 420, 1657, 2086
Bsp1720I	GCTNAGC	1 cut(s)	1347
Bsp19I	CCATGG	4 cut(s)	318, 2047, 2074, 2197
BspCNI	CTCAG	8 cut(s)	282, 675, 1291, 1360, 1381, 1780, 1996, 2347
BspFNI	CGCG	1 cut(s)	275
BspHI	TCATGA	1 cut(s)	1119
BspLI	GGNNCC	7 cut(s)	576, 668, 1286, 1513, 1528, 1896, 1958
BspMAI	CTGCAG	1 cut(s)	1479
BspMI	ACCTGC	2 cut(s)	840, 1755
BspPI	GGATC	3 cut(s)	428, 1665, 2081
BspT107I	GGYRCC	2 cut(s)	1511, 1956
BspTNI	GGTCTC	1 cut(s)	2247
BsrBI	CCGCTC	1 cut(s)	248
BsrDI	GCAATG	3 cut(s)	1455, 1599, 2393
BsrFI	RCCGGY	2 cut(s)	796, 902
BsrGI	TGTACA	1 cut(s)	1248
BsrI	ACTGG	2 cut(s)	1694, 2185
BssAI	RCCGGY	2 cut(s)	796, 902
BssECI	CCNNGG	8 cut(s)	119, 318, 415, 897, 1101, 2047, 2074, 2197
BssMI	GATC	5 cut(s)	20, 144, 420, 1657, 2086
BssNAI	GTATAC	1 cut(s)	1308
BssNI	GRCGYC	4 cut(s)	57, 332, 1957, 2001
BssSI	CACGAG	1 cut(s)	101
BssT1I	CCWWGG	6 cut(s)	119, 318, 1101, 2047, 2074, 2197
Bst1107I	GTATAC	1 cut(s)	1308
Bst2BI	CACGAG	1 cut(s)	101
Bst2UI	CCWGG	1 cut(s)	1636
Bst4CI	ACNGT	3 cut(s)	263, 1540, 2022
Bst6I	CTCTTC	4 cut(s)	593, 609, 1101, 2322
BstACI	GRCGYC	4 cut(s)	57, 332, 1957, 2001
BstAPI	GCANNNNNTGC	2 cut(s)	1943, 2286
BstAUI	TGTACA	1 cut(s)	1248
BstBAI	YACGTR	1 cut(s)	438
BstDSI	CCRYGG	5 cut(s)	318, 415, 2047, 2074, 2197
BstF5I	GGATG	4 cut(s)	304, 808, 1189, 1399
BstFNI	CGCG	1 cut(s)	275
BstH2I	RGCGCY	3 cut(s)	101, 366, 1960
BstHHI	GCGC	7 cut(s)	100, 277, 360, 365, 1926, 1948, 1959
BstKTI	GATC	5 cut(s)	23, 147, 423, 1660, 2089
BstMAI	GTCTC	2 cut(s)	1784, 2247
BstMBI	GATC	5 cut(s)	20, 144, 420, 1657, 2086
BstNI	CCWGG	1 cut(s)	1636
BstNSI	RCATGY	2 cut(s)	1172, 1879
BstSCI	CCNGG	3 cut(s)	81, 1228, 1634
BstSFI	CTRYAG	2 cut(s)	1475, 2290
BstUI	CGCG	1 cut(s)	275
BstV1I	GCAGC	6 cut(s)	372, 394, 997, 1100, 1461, 1483
BstX2I	RGATCY	2 cut(s)	1657, 2086
BstXI	CCANNNNNNTGG	1 cut(s)	1338
BstYI	RGATCY	2 cut(s)	1657, 2086
BstZ17I	GTATAC	1 cut(s)	1308
BtgI	CCRYGG	5 cut(s)	318, 415, 2047, 2074, 2197
BtrI	CACGTC	1 cut(s)	256
BtsCI	GGATG	4 cut(s)	304, 808, 1189, 1399
BtsI	GCAGTG	1 cut(s)	1912
BtsIMutI	CAGTG	4 cut(s)	920, 1536, 1701, 1912
BveI	ACCTGC	2 cut(s)	840, 1755
CaiI	CAGNNNCTG	1 cut(s)	1856
CciI	TCATGA	1 cut(s)	1119
CfoI	GCGC	7 cut(s)	100, 277, 360, 365, 1926, 1948, 1959
Cfr10I	RCCGGY	2 cut(s)	796, 902
Cfr13I	GGNCC	8 cut(s)	174, 220, 259, 575, 918, 1728, 1894, 1910
CseI	GACGC	5 cut(s)	65, 281, 321, 1553, 2009
CsiI	ACCWGGT	1 cut(s)	1634
Csp6I	GTAC	6 cut(s)	235, 853, 1249, 1691, 1710, 2332
CspAI	ACCGGT	1 cut(s)	796
CspCI	CAANNNNNGTGG	2 cut(s)	1240, 1275
CviQI	GTAC	6 cut(s)	235, 853, 1249, 1691, 1710, 2332
DinI	GGCGCC	1 cut(s)	1958
DpnI	GATC	5 cut(s)	22, 146, 422, 1659, 2088
DpnII	GATC	5 cut(s)	20, 144, 420, 1657, 2086
DraIII	CACNNNGTG	1 cut(s)	1148
EaeI	YGGCCR	3 cut(s)	108, 1231, 1328
Eam1104I	CTCTTC	4 cut(s)	593, 609, 1101, 2322
EarI	CTCTTC	4 cut(s)	593, 609, 1101, 2322
EciI	GGCGGA	1 cut(s)	341
Eco130I	CCWWGG	6 cut(s)	119, 318, 1101, 2047, 2074, 2197
Eco147I	AGGCCT	1 cut(s)	1100
Eco24I	GRGCYC	1 cut(s)	78
Eco31I	GGTCTC	1 cut(s)	2247
Eco47I	GGWCC	3 cut(s)	174, 259, 1728
Eco57I	CTGAAG	1 cut(s)	802
Eco72I	CACGTG	1 cut(s)	438
Eco88I	CYCGRG	1 cut(s)	950
EcoO109I	RGGNCCY	2 cut(s)	220, 575
EcoRII	CCWGG	1 cut(s)	1634
EcoT14I	CCWWGG	6 cut(s)	119, 318, 1101, 2047, 2074, 2197
EcoT38I	GRGCYC	1 cut(s)	78
EgeI	GGCGCC	1 cut(s)	1958
EheI	GGCGCC	1 cut(s)	1958
ErhI	CCWWGG	6 cut(s)	119, 318, 1101, 2047, 2074, 2197
FalI	AAGNNNNNCTT	2 cut(s)	1730, 1762
FaqI	GGGAC	4 cut(s)	1008, 1703, 2024, 2198
FauI	CCCGC	4 cut(s)	241, 487, 1728, 1920
FblI	GTMKAC	1 cut(s)	1307
FokI	GGATG	4 cut(s)	311, 815, 1196, 1406
FriOI	GRGCYC	1 cut(s)	78
FspBI	CTAG	5 cut(s)	120, 278, 564, 1311, 1380
GlaI	GCGC	7 cut(s)	99, 276, 359, 364, 1925, 1947, 1958
GsaI	CCCAGC	2 cut(s)	558, 828
HaeII	RGCGCY	3 cut(s)	101, 366, 1960
HapII	CCGG	4 cut(s)	82, 797, 903, 1230
HgaI	GACGC	5 cut(s)	65, 281, 321, 1553, 2009
HhaI	GCGC	7 cut(s)	100, 277, 360, 365, 1926, 1948, 1959
Hin1I	GRCGYC	4 cut(s)	57, 332, 1957, 2001
Hin6I	GCGC	7 cut(s)	98, 275, 358, 363, 1924, 1946, 1957
HinP1I	GCGC	7 cut(s)	98, 275, 358, 363, 1924, 1946, 1957
HindIII	AAGCTT	4 cut(s)	699, 759, 1404, 2171
HpaII	CCGG	4 cut(s)	82, 797, 903, 1230
HphI	GGTGA	4 cut(s)	539, 980, 1504, 1697
Hpy166II	GTNNAC	9 cut(s)	115, 259, 352, 451, 1308, 1543, 1867, 1966, 2160
Hpy8I	GTNNAC	9 cut(s)	115, 259, 352, 451, 1308, 1543, 1867, 1966, 2160
HpyCH4III	ACNGT	3 cut(s)	263, 1540, 2022
HpyCH4IV	ACGT	4 cut(s)	212, 233, 255, 437
HpySE526I	ACGT	4 cut(s)	212, 233, 255, 437
Hsp92I	GRCGYC	4 cut(s)	57, 332, 1957, 2001
HspAI	GCGC	7 cut(s)	98, 275, 358, 363, 1924, 1946, 1957
KasI	GGCGCC	1 cut(s)	1956
Kzo9I	GATC	5 cut(s)	20, 144, 420, 1657, 2086
LmnI	GCTCC	8 cut(s)	15, 245, 286, 666, 680, 694, 1376, 1802
Lsp1109I	GCAGC	6 cut(s)	372, 394, 997, 1100, 1461, 1483
LweI	GCATC	6 cut(s)	1129, 1231, 1384, 1441, 1933, 2052
MabI	ACCWGGT	1 cut(s)	1634
MaeI	CTAG	5 cut(s)	120, 278, 564, 1311, 1380
MaeII	ACGT	4 cut(s)	212, 233, 255, 437
MaeIII	GTNAC	2 cut(s)	263, 1534
MalI	GATC	5 cut(s)	22, 146, 422, 1659, 2088
MbiI	CCGCTC	1 cut(s)	248
MboI	GATC	5 cut(s)	20, 144, 420, 1657, 2086
MfeI	CAATTG	1 cut(s)	720
MflI	RGATCY	2 cut(s)	1657, 2086
MhlI	GDGCHC	4 cut(s)	78, 663, 744, 1348
MlsI	TGGCCA	1 cut(s)	1330
MluNI	TGGCCA	1 cut(s)	1330
Mly113I	GGCGCC	1 cut(s)	1957
MlyI	GAGTC	7 cut(s)	301, 377, 533, 626, 869, 1118, 1651
MmeI	TCCRAC	1 cut(s)	264
Mox20I	TGGCCA	1 cut(s)	1330
MroXI	GAANNNNTTC	1 cut(s)	1755
MscI	TGGCCA	1 cut(s)	1330
MseI	TTAA	7 cut(s)	753, 983, 1095, 1557, 1773, 2127, 2250
MslI	CAYNNNNRTG	4 cut(s)	630, 1118, 1239, 1341
Msp20I	TGGCCA	1 cut(s)	1330
MspA1I	CMGCKG	4 cut(s)	385, 748, 1091, 1474
MspI	CCGG	4 cut(s)	82, 797, 903, 1230
MspR9I	CCNGG	3 cut(s)	83, 1230, 1636
MteI	GCGCNGCGC	1 cut(s)	361
MunI	CAATTG	1 cut(s)	720
MvaI	CCWGG	1 cut(s)	1636
MvnI	CGCG	1 cut(s)	275
NarI	GGCGCC	1 cut(s)	1957
NciI	CCSGG	2 cut(s)	83, 1230
NcoI	CCATGG	4 cut(s)	318, 2047, 2074, 2197
NdeII	GATC	5 cut(s)	20, 144, 420, 1657, 2086
NlaIV	GGNNCC	7 cut(s)	576, 668, 1286, 1513, 1528, 1896, 1958
NmeAIII	GCCGAG	2 cut(s)	391, 922
NmuCI	GTSAC	2 cut(s)	263, 1534
NspI	RCATGY	2 cut(s)	1172, 1879
PaeI	GCATGC	1 cut(s)	1172
PagI	TCATGA	1 cut(s)	1119
PceI	AGGCCT	1 cut(s)	1100
PcsI	WCGNNNNNNNCGW	4 cut(s)	108, 249, 341, 429
PdmI	GAANNNNTTC	1 cut(s)	1755
PfeI	GAWTC	3 cut(s)	463, 532, 2191
Pfl23II	CGTACG	1 cut(s)	234
PflMI	CCANNNNNTGG	1 cut(s)	2237
PinAI	ACCGGT	1 cut(s)	796
PleI	GAGTC	7 cut(s)	300, 376, 533, 625, 868, 1117, 1650
PluTI	GGCGCC	1 cut(s)	1960
PmaCI	CACGTG	1 cut(s)	438
PmlI	CACGTG	1 cut(s)	438
PpsI	GAGTC	7 cut(s)	300, 376, 533, 625, 868, 1117, 1650
Ppu21I	YACGTR	1 cut(s)	438
Psp6I	CCWGG	1 cut(s)	1634
PspCI	CACGTG	1 cut(s)	438
PspFI	CCCAGC	2 cut(s)	554, 824
PspGI	CCWGG	1 cut(s)	1634
PspLI	CGTACG	1 cut(s)	234
PspN4I	GGNNCC	7 cut(s)	576, 668, 1286, 1513, 1528, 1896, 1958
PspPI	GGNCC	8 cut(s)	174, 220, 259, 575, 918, 1728, 1894, 1910
PstI	CTGCAG	1 cut(s)	1479
PstNI	CAGNNNCTG	1 cut(s)	1856
PsuI	RGATCY	2 cut(s)	1657, 2086
PvuII	CAGCTG	3 cut(s)	748, 1091, 1474
RsaI	GTAC	6 cut(s)	236, 854, 1250, 1692, 1711, 2333
RsaNI	GTAC	6 cut(s)	235, 853, 1249, 1691, 1710, 2332
RseI	CAYNNNNRTG	4 cut(s)	630, 1118, 1239, 1341
SaqAI	TTAA	7 cut(s)	753, 983, 1095, 1557, 1773, 2127, 2250
Sau3AI	GATC	5 cut(s)	20, 144, 420, 1657, 2086
Sau96I	GGNCC	8 cut(s)	174, 220, 259, 575, 918, 1728, 1894, 1910
SchI	GAGTC	7 cut(s)	301, 377, 533, 626, 869, 1118, 1651
ScrFI	CCNGG	3 cut(s)	83, 1230, 1636
SduI	GDGCHC	4 cut(s)	78, 663, 744, 1348
SexAI	ACCWGGT	1 cut(s)	1634
SfaNI	GCATC	6 cut(s)	1129, 1231, 1384, 1441, 1933, 2052
SfcI	CTRYAG	2 cut(s)	1475, 2290
SfiI	GGCCNNNNNGGCC	1 cut(s)	899
SfoI	GGCGCC	1 cut(s)	1958
SinI	GGWCC	3 cut(s)	174, 259, 1728
SmiMI	CAYNNNNRTG	4 cut(s)	630, 1118, 1239, 1341
SmlI	CTYRAG	2 cut(s)	887, 1607
SmoI	CTYRAG	2 cut(s)	887, 1607
SphI	GCATGC	1 cut(s)	1172
SseBI	AGGCCT	1 cut(s)	1100
SspDI	GGCGCC	1 cut(s)	1956
SspMI	CTAG	5 cut(s)	120, 278, 564, 1311, 1380
StuI	AGGCCT	1 cut(s)	1100
StyD4I	CCNGG	3 cut(s)	81, 1228, 1634
StyI	CCWWGG	6 cut(s)	119, 318, 1101, 2047, 2074, 2197
TaaI	ACNGT	3 cut(s)	263, 1540, 2022
TaiI	ACGT	4 cut(s)	215, 236, 258, 440
TaqI	TCGA	7 cut(s)	192, 270, 344, 429, 689, 705, 1197
TatI	WGTACW	2 cut(s)	1248, 2331
TauI	GCSGC	5 cut(s)	98, 326, 395, 896, 2226
TfiI	GAWTC	3 cut(s)	463, 532, 2191
Tru1I	TTAA	7 cut(s)	753, 983, 1095, 1557, 1773, 2127, 2250
Tru9I	TTAA	7 cut(s)	753, 983, 1095, 1557, 1773, 2127, 2250
TscAI	CASTG	4 cut(s)	920, 1543, 1701, 1912
TseFI	GTSAC	2 cut(s)	263, 1534
TseI	GCWGC	6 cut(s)	360, 382, 1010, 1088, 1471, 1474
Tsp45I	GTSAC	2 cut(s)	263, 1534
TspDTI	ATGAA	4 cut(s)	178, 1108, 1136, 2384
TspGWI	ACGGA	3 cut(s)	84, 258, 693
TspRI	CASTG	4 cut(s)	920, 1543, 1701, 1912
Van91I	CCANNNNNTGG	1 cut(s)	2237
VpaK11BI	GGWCC	3 cut(s)	174, 259, 1728
XapI	RAATTY	2 cut(s)	1553, 1755
XbaI	TCTAGA	1 cut(s)	563
XceI	RCATGY	2 cut(s)	1172, 1879
XmaJI	CCTAGG	1 cut(s)	119
XmiI	GTMKAC	1 cut(s)	1307
XmnI	GAANNNNTTC	1 cut(s)	1755
XspI	CTAG	5 cut(s)	120, 278, 564, 1311, 1380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.