Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000322.1

Orthogroup ID

OG0012291

Physical Location & Seq

Genomic Coordinates Forward (+)

159997 .. 163518

Gene Structure 3522 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

atggcggcggcggtggtgtcgtctcaggtggctcaacccgttgttccggtgactcaacaatctccggtgtcggctccggcggggttcgggaacgtgtcgctgtacgtgggcgatctggacccgactgtgaacgaagcgcaactttacgatctgttcaaccaagtggctcaggttgcttccctccgggtttgtagggatcagacccgaatgcactcgcttggctatgcctatgtcaattacgccactccacaggatgctgctaatgccaaggagcttttaaattttgctcctataaatgggaaacccattaggatcatgtactctcatcgcgatcccagcattcggaagagcggatatgcaaatttatttatcaagaacctggaaaaatctattgataacaaggcattgttggacactttttctgcctttgggaccgtactctcttgcaaggttgcagctgatgccagtggtcaatcaaaaggatatggtttcgtacagtatgacaatgaggaatctgcaaataatgcaatcaacaagctgaatggcatgctgataaatgagaaacaggtttccgttggaccttatgttcgacgccagaggtcaaattcatttcgaaatatttatgtgaaaaatttgtctgagacaactacagatgaagaccttaagaagctttttggaaaatctggtaacatcactagtgctgcggttatgagggatgaaaatggaaagtctagatgctttggctttgttaacttcgaaaacgctaaagacgctgttgctgcaattgatgagtttaatgggacaacttttaatgataaggttttgtttgttgggaaggctcaaaagaagatagagaggcaggcagagttaagagcgaagtttgaacaggaaagaatcagcagatttgagaagctacaaggtgctaatttatatctgaaaaatcttgatgacaccatcaatgatgacaaactaaaggagctattctctgaatttggaacaataacatcatgcaaggtcatgcttgatcatcaaggaatgagcaagggatctggatttgttgccttttctaccccagaggaagctaacaaagctttgaatgaaatgaatgggaagatgattggacggaagcctctatacgttgctgtggcccagcggaaagaagagaggaaggctcgattacaggcacgttttgcccaaatccgagcaccaagtggaatgacacctttgccatcgggaattcctggatttcatcctggggcacctagactctcccctcagcagctgtattttggtcaaggtactcctggccttctaccgcatcagcctgcaggttatggtttccagcagcaaatcttgcctgggatgcgtccaggtgttgctcccaacttcattatgccatatcaccttcagaggcaaggtcaacctgggcagcgatttggtgtacggcgaggcggcaacttccaacaagtgcagcagcagccgcagttaatgcaccgtaactccaatcaaggcttgagatacatgggtaatgctcggaacggagttgagtctcctgtgtctccccaaggtcttgtgagtccaatgatgcctttgccctttgacggttcaggtatgcctgtgacatctagtgatatccagcgttctgggccagtgcctatgtcaacacttgcttctgctttagcttctgctactcccgagaatcagcgtttgatgctgggagagcagctatatccacttgttgagcgtattgagccagaactcacagctaaggtgactgggatgttgctggagatggaccagacagaagttctccatctgatcgagtctccagatgctctcaaggataaggtagctgaggcgatggatgtccttcataaagctacatcaaagactgatgtcaccgatcagcttggtgcattagatctgaattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000289 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008143 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009894 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019219 GO:0019222 GO:0019439 GO:0019538 GO:0031323 GO:0031329 GO:0034641 GO:0034645 GO:0034655 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060211 GO:0060255 GO:0061013 GO:0065007 GO:0070717 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1900151 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1903311

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

643

Amino Acids

70.58

Weight (kDa)

9.0

Isoelectric Point (pI)

45.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	34 - 104	3.2e-15	RNA recognition motif
RRM_1	PF00076	122 - 190	4.6e-20	RNA recognition motif
RRM_1	PF00076	207 - 275	4.7e-22	RNA recognition motif
RRM_1	PF00076	310 - 378	9.6e-21	RNA recognition motif
MLLE	PF00658	559 - 624	1.3e-28	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22760 AT1G71770 AT1G71770
fragaria_vesca	FvH4_2g12840
malus_domestica	MD05G1035900.v1.1 MD10G1038000.v1.1
prunus_persica	Prupe.8G043700_v2.0.a1
pyrus_communis	pycom05g02640 pycom10g02600
rosa_chinensis	RchiOBHm_Chr6g0273861
rosa_laevigata	RLG00000013594
rosa_multiflora	Rmu_ssc0000322.1_g000029
rosa_roxburghii	Rroxscaffold_7G00194960
rosa_rugosa	Rorug06G0077500
rosa_samantha	Rh6AG193000 Rh6BG196900 Rh6CG196100 Rh6DG188100
rosa_wichuraiana	Rw6G016820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1319
AccB1I	GGYRCC	1 cut(s)	1258
AccBSI	CCGCTC	1 cut(s)	351
AccII	CGCG	1 cut(s)	330
AclWI	GGATC	4 cut(s)	204, 320, 326, 1054
AcsI	RAATTY	6 cut(s)	280, 361, 604, 631, 989, 1236
AcuI	CTGAAG	1 cut(s)	1391
AcyI	GRCGYC	1 cut(s)	592
AdeI	CACNNNGTG	1 cut(s)	1211
AfaI	GTAC	6 cut(s)	104, 320, 438, 495, 1300, 1443
AfiI	CCNNNNNNNGG	3 cut(s)	296, 342, 1601
AflII	CTTAAG	1 cut(s)	662
AflIII	ACRYGT	1 cut(s)	93
AgsI	TTSAA	3 cut(s)	157, 884, 1096
AhlI	ACTAGT	1 cut(s)	695
AjnI	CCWGG	7 cut(s)	378, 1240, 1252, 1303, 1357, 1369, 1423
AloI	GAACNNNNNNTCC	2 cut(s)	570, 602
Alw21I	GWGCWC	1 cut(s)	1207
Alw26I	GTCTC	5 cut(s)	27, 635, 1554, 1563, 1830
AlwI	GGATC	4 cut(s)	204, 320, 326, 1054
AlwNI	CAGNNNCTG	1 cut(s)	1282
Ama87I	CYCGRG	1 cut(s)	1694
AoxI	GGCC	3 cut(s)	1146, 1306, 1646
ApoI	RAATTY	6 cut(s)	280, 361, 604, 631, 989, 1236
ArsI	GACNNNNNNTTYG	2 cut(s)	570, 602
AspLEI	GCGC	1 cut(s)	139
AspS9I	GGNCC	6 cut(s)	118, 432, 578, 1147, 1646, 1795
AsuC2I	CCSGG	1 cut(s)	185
AsuHPI	GGTGA	4 cut(s)	61, 1394, 1783, 1891
AsuII	TTCGAA	2 cut(s)	613, 756
AvaI	CYCGRG	1 cut(s)	1694
AvaII	GGWCC	4 cut(s)	118, 432, 578, 1795
BaeGI	GKGCMC	1 cut(s)	1261
BaeI	ACNNNNGTAYC	2 cut(s)	1510, 1543
BanI	GGYRCC	1 cut(s)	1258
BarI	GAAGNNNNNNTAC	2 cut(s)	1118, 1150
BbsI	GAAGAC	1 cut(s)	663
Bbv12I	GWGCWC	1 cut(s)	1207
BbvCI	CCTCAGC	2 cut(s)	1275, 1854
BccI	CCATC	5 cut(s)	962, 1237, 1786, 1821, 1855
BceAI	ACGGC	1 cut(s)	1460
BciT130I	CCWGG	7 cut(s)	380, 1242, 1254, 1305, 1359, 1371, 1425
BclI	TGATCA	1 cut(s)	1024
BcnI	CCSGG	1 cut(s)	185
BcoDI	GTCTC	5 cut(s)	27, 635, 1554, 1563, 1830
BcuI	ACTAGT	1 cut(s)	695
BfaI	CTAG	4 cut(s)	696, 732, 1263, 1626
BfmI	CTRYAG	2 cut(s)	648, 1326
BfrI	CTTAAG	1 cut(s)	662
BfuAI	ACCTGC	1 cut(s)	1319
BglII	AGATCT	1 cut(s)	1921
Bme1390I	CCNGG	8 cut(s)	185, 380, 1242, 1254, 1305, 1359, 1371, 1425
Bme18I	GGWCC	4 cut(s)	118, 432, 578, 1795
BmeT110I	CYCGRG	1 cut(s)	1694
BmgT120I	GGNCC	6 cut(s)	118, 432, 578, 1147, 1646, 1795
BmiI	GGNNCC	4 cut(s)	75, 120, 433, 1260
BmrFI	CCNGG	8 cut(s)	185, 380, 1242, 1254, 1305, 1359, 1371, 1425
BmrI	ACTGGG	1 cut(s)	1785
BmsI	GCATC	8 cut(s)	244, 451, 725, 1327, 1353, 1575, 1701, 1822
BmuI	ACTGGG	1 cut(s)	1785
BoxI	GACNNNNGTC	1 cut(s)	1895
BpiI	GAAGAC	1 cut(s)	663
BplI	GAGNNNNNCTC	4 cut(s)	968, 1000, 1156, 1188
BpmI	CTGGAG	2 cut(s)	1808, 1812
Bpu10I	CCTNAGC	4 cut(s)	168, 1275, 1767, 1854
Bpu14I	TTCGAA	2 cut(s)	613, 756
BpuEI	CTTGAG	2 cut(s)	1534, 1823
BpuMI	CCSGG	1 cut(s)	185
BsaAI	YACGTR	1 cut(s)	106
BsaHI	GRCGYC	1 cut(s)	592
BsaJI	CCNNGG	5 cut(s)	267, 1253, 1358, 1424, 1564
BsaWI	WCCGGW	2 cut(s)	46, 64
BsaXI	ACNNNNNCTCC	2 cut(s)	1484, 1514
Bsc4I	CCNNNNNNNGG	3 cut(s)	296, 342, 1601
Bse1I	ACTGG	3 cut(s)	465, 1649, 1780
BseBI	CCWGG	7 cut(s)	380, 1242, 1254, 1305, 1359, 1371, 1425
BseDI	CCNNGG	5 cut(s)	267, 1253, 1358, 1424, 1564
BseGI	GGATG	6 cut(s)	259, 721, 1249, 1368, 1785, 1870
BseLI	CCNNNNNNNGG	3 cut(s)	296, 342, 1601
BseMII	CTCAG	5 cut(s)	38, 182, 630, 1289, 1845
BseNI	ACTGG	3 cut(s)	465, 1649, 1780
BseSI	GKGCMC	1 cut(s)	1261
BseYI	CCCAGC	3 cut(s)	335, 1149, 1714
BsgI	GTGCAG	1 cut(s)	1490
Bsh1236I	CGCG	1 cut(s)	330
BshFI	GGCC	3 cut(s)	1148, 1308, 1648
BshNI	GGYRCC	1 cut(s)	1258
BsiHKAI	GWGCWC	1 cut(s)	1207
BsiHKCI	CYCGRG	1 cut(s)	1694
BsiSI	CCGG	4 cut(s)	47, 65, 77, 184
BslFI	GGGAC	2 cut(s)	445, 814
BslI	CCNNNNNNNGG	3 cut(s)	296, 342, 1601
BsmAI	GTCTC	5 cut(s)	27, 635, 1554, 1563, 1830
BsmBI	CGTCTC	1 cut(s)	27
BsmFI	GGGAC	2 cut(s)	445, 814
BsmI	GAATGC	2 cut(s)	213, 339
BsnI	GGCC	3 cut(s)	1148, 1308, 1648
BsoBI	CYCGRG	1 cut(s)	1694
Bsp119I	TTCGAA	2 cut(s)	613, 756
Bsp1286I	GDGCHC	2 cut(s)	1207, 1261
Bsp68I	TCGCGA	1 cut(s)	330
BspANI	GGCC	3 cut(s)	1148, 1308, 1648
BspCNI	CTCAG	5 cut(s)	37, 181, 631, 1288, 1846
BspFNI	CGCG	1 cut(s)	330
BspLI	GGNNCC	4 cut(s)	75, 120, 433, 1260
BspMAI	CTGCAG	1 cut(s)	1330
BspMI	ACCTGC	1 cut(s)	1319
BspPI	GGATC	4 cut(s)	204, 320, 326, 1054
BspQI	GCTCTTC	1 cut(s)	341
BspT104I	TTCGAA	2 cut(s)	613, 756
BspT107I	GGYRCC	1 cut(s)	1258
BspTI	CTTAAG	1 cut(s)	662
BsrBI	CCGCTC	1 cut(s)	351
BsrI	ACTGG	3 cut(s)	465, 1649, 1780
BssECI	CCNNGG	5 cut(s)	267, 1253, 1358, 1424, 1564
BssNI	GRCGYC	1 cut(s)	592
BssT1I	CCWWGG	2 cut(s)	267, 1564
Bst2UI	CCWGG	7 cut(s)	380, 1242, 1254, 1305, 1359, 1371, 1425
Bst4CI	ACNGT	5 cut(s)	127, 436, 498, 1496, 1604
Bst6I	CTCTTC	2 cut(s)	341, 1155
BstACI	GRCGYC	1 cut(s)	592
BstAFI	CTTAAG	1 cut(s)	662
BstAPI	GCANNNNNTGC	5 cut(s)	461, 524, 1190, 1354, 1489
BstBAI	YACGTR	1 cut(s)	106
BstBI	TTCGAA	2 cut(s)	613, 756
BstC8I	GCNNGC	3 cut(s)	548, 861, 1326
BstDEI	CTNAG	6 cut(s)	24, 168, 639, 1275, 1767, 1854
BstF5I	GGATG	6 cut(s)	259, 721, 1249, 1368, 1785, 1870
BstFNI	CGCG	1 cut(s)	330
BstHHI	GCGC	1 cut(s)	139
BstMAI	GTCTC	5 cut(s)	27, 635, 1554, 1563, 1830
BstNI	CCWGG	7 cut(s)	380, 1242, 1254, 1305, 1359, 1371, 1425
BstNSI	RCATGY	1 cut(s)	550
BstPAI	GACNNNNGTC	1 cut(s)	1895
BstSCI	CCNGG	8 cut(s)	183, 378, 1240, 1252, 1303, 1357, 1369, 1423
BstSFI	CTRYAG	2 cut(s)	648, 1326
BstSLI	GKGCMC	1 cut(s)	1261
BstUI	CGCG	1 cut(s)	330
BstV2I	GAAGAC	1 cut(s)	663
BstX2I	RGATCY	2 cut(s)	1046, 1921
BstXI	CCANNNNNNTGG	1 cut(s)	1643
BstYI	RGATCY	2 cut(s)	1046, 1921
BsuRI	GGCC	3 cut(s)	1148, 1308, 1648
BtgZI	GCGATG	2 cut(s)	311, 1874
BtsCI	GGATG	6 cut(s)	259, 721, 1249, 1368, 1785, 1870
BtsIMutI	CAGTG	2 cut(s)	472, 1656
BtuMI	TCGCGA	1 cut(s)	330
BveI	ACCTGC	1 cut(s)	1319
Cac8I	GCNNGC	3 cut(s)	548, 861, 1326
CaiI	CAGNNNCTG	1 cut(s)	1282
CfoI	GCGC	1 cut(s)	139
Cfr13I	GGNCC	6 cut(s)	118, 432, 578, 1147, 1646, 1795
CseI	GACGC	3 cut(s)	600, 779, 1355
Csp6I	GTAC	6 cut(s)	103, 319, 437, 494, 1299, 1442
CviAII	CATG	5 cut(s)	316, 547, 1008, 1018, 1522
CviQI	GTAC	6 cut(s)	103, 319, 437, 494, 1299, 1442
DdeI	CTNAG	6 cut(s)	24, 168, 639, 1275, 1767, 1854
DraI	TTTAAA	1 cut(s)	279
DraIII	CACNNNGTG	1 cut(s)	1211
Eam1104I	CTCTTC	2 cut(s)	341, 1155
EarI	CTCTTC	2 cut(s)	341, 1155
Eco130I	CCWWGG	2 cut(s)	267, 1564
Eco32I	GATATC	1 cut(s)	1633
Eco47I	GGWCC	4 cut(s)	118, 432, 578, 1795
Eco57I	CTGAAG	1 cut(s)	1391
Eco88I	CYCGRG	1 cut(s)	1694
EcoRI	GAATTC	1 cut(s)	1236
EcoRII	CCWGG	7 cut(s)	378, 1240, 1252, 1303, 1357, 1369, 1423
EcoRV	GATATC	1 cut(s)	1633
EcoT14I	CCWWGG	2 cut(s)	267, 1564
ErhI	CCWWGG	2 cut(s)	267, 1564
Esp3I	CGTCTC	1 cut(s)	27
FaeI	CATG	5 cut(s)	319, 550, 1011, 1021, 1525
FalI	AAGNNNNNCTT	2 cut(s)	126, 158
FaqI	GGGAC	2 cut(s)	445, 814
FatI	CATG	5 cut(s)	315, 546, 1007, 1017, 1521
FauI	CCCGC	1 cut(s)	73
FbaI	TGATCA	1 cut(s)	1024
FokI	GGATG	6 cut(s)	266, 728, 1236, 1375, 1792, 1877
FspBI	CTAG	4 cut(s)	696, 732, 1263, 1626
GlaI	GCGC	1 cut(s)	138
GsaI	CCCAGC	3 cut(s)	339, 1153, 1718
GsuI	CTGGAG	2 cut(s)	1808, 1812
HaeIII	GGCC	3 cut(s)	1148, 1308, 1648
HapII	CCGG	4 cut(s)	47, 65, 77, 184
HgaI	GACGC	3 cut(s)	600, 779, 1355
HhaI	GCGC	1 cut(s)	139
Hin1I	GRCGYC	1 cut(s)	592
Hin1II	CATG	5 cut(s)	319, 550, 1011, 1021, 1525
Hin6I	GCGC	1 cut(s)	137
HinP1I	GCGC	1 cut(s)	137
HincII	GTYRAC	3 cut(s)	751, 1421, 1662
HindII	GTYRAC	3 cut(s)	751, 1421, 1662
HindIII	AAGCTT	2 cut(s)	668, 1089
HinfI	GANTC	8 cut(s)	52, 512, 894, 1266, 1547, 1576, 1699, 1823
HpaI	GTTAAC	1 cut(s)	751
HpaII	CCGG	4 cut(s)	47, 65, 77, 184
HphI	GGTGA	4 cut(s)	61, 1394, 1783, 1891
Hpy166II	GTNNAC	5 cut(s)	130, 751, 1421, 1442, 1662
Hpy8I	GTNNAC	5 cut(s)	130, 751, 1421, 1442, 1662
Hpy99I	CGWCG	1 cut(s)	594
HpyAV	CCTTC	5 cut(s)	829, 1162, 1319, 1415, 1880
HpyCH4III	ACNGT	5 cut(s)	127, 436, 498, 1496, 1604
HpyCH4IV	ACGT	4 cut(s)	93, 105, 1137, 1186
HpyF3I	CTNAG	6 cut(s)	24, 168, 639, 1275, 1767, 1854
HpySE526I	ACGT	4 cut(s)	93, 105, 1137, 1186
Hsp92I	GRCGYC	1 cut(s)	592
Hsp92II	CATG	5 cut(s)	319, 550, 1011, 1021, 1525
HspAI	GCGC	1 cut(s)	137
Ksp22I	TGATCA	1 cut(s)	1024
KspAI	GTTAAC	1 cut(s)	751
LguI	GCTCTTC	1 cut(s)	341
LmnI	GCTCC	5 cut(s)	79, 271, 292, 976, 1384
LweI	GCATC	8 cut(s)	244, 451, 725, 1327, 1353, 1575, 1701, 1822
MaeI	CTAG	4 cut(s)	696, 732, 1263, 1626
MaeII	ACGT	4 cut(s)	93, 105, 1137, 1186
MaeIII	GTNAC	6 cut(s)	49, 686, 1496, 1618, 1771, 1897
MbiI	CCGCTC	1 cut(s)	351
MboII	GAAGA	5 cut(s)	358, 668, 859, 1123, 1172
MfeI	CAATTG	1 cut(s)	783
MflI	RGATCY	2 cut(s)	1046, 1921
MhlI	GDGCHC	2 cut(s)	1207, 1261
MlyI	GAGTC	5 cut(s)	46, 1260, 1556, 1585, 1832
MmeI	TCCRAC	3 cut(s)	390, 556, 1486
MseI	TTAA	7 cut(s)	278, 663, 750, 795, 810, 869, 1487
MspA1I	CMGCKG	3 cut(s)	458, 1153, 1282
MspCI	CTTAAG	1 cut(s)	662
MspI	CCGG	4 cut(s)	47, 65, 77, 184
MspR9I	CCNGG	8 cut(s)	185, 380, 1242, 1254, 1305, 1359, 1371, 1425
MunI	CAATTG	1 cut(s)	783
Mva1269I	GAATGC	2 cut(s)	213, 339
MvaI	CCWGG	7 cut(s)	380, 1242, 1254, 1305, 1359, 1371, 1425
MvnI	CGCG	1 cut(s)	330
NciI	CCSGG	1 cut(s)	185
NlaIII	CATG	5 cut(s)	319, 550, 1011, 1021, 1525
NlaIV	GGNNCC	4 cut(s)	75, 120, 433, 1260
NmuCI	GTSAC	4 cut(s)	49, 1618, 1771, 1897
NruI	TCGCGA	1 cut(s)	330
NspI	RCATGY	1 cut(s)	550
NspV	TTCGAA	2 cut(s)	613, 756
PaeI	GCATGC	1 cut(s)	550
PciSI	GCTCTTC	1 cut(s)	341
PctI	GAATGC	2 cut(s)	213, 339
PfeI	GAWTC	3 cut(s)	512, 894, 1699
PfoI	TCCNGGA	1 cut(s)	1240
PleI	GAGTC	5 cut(s)	46, 1260, 1555, 1584, 1831
PpsI	GAGTC	5 cut(s)	46, 1260, 1555, 1584, 1831
Ppu21I	YACGTR	1 cut(s)	106
PshAI	GACNNNNGTC	1 cut(s)	1895
Psp6I	CCWGG	7 cut(s)	378, 1240, 1252, 1303, 1357, 1369, 1423
PspFI	CCCAGC	3 cut(s)	335, 1149, 1714
PspGI	CCWGG	7 cut(s)	378, 1240, 1252, 1303, 1357, 1369, 1423
PspN4I	GGNNCC	4 cut(s)	75, 120, 433, 1260
PspPI	GGNCC	6 cut(s)	118, 432, 578, 1147, 1646, 1795
PstI	CTGCAG	1 cut(s)	1330
PstNI	CAGNNNCTG	1 cut(s)	1282
PsuI	RGATCY	2 cut(s)	1046, 1921
PvuII	CAGCTG	2 cut(s)	458, 1282
RruI	TCGCGA	1 cut(s)	330
RsaI	GTAC	6 cut(s)	104, 320, 438, 495, 1300, 1443
RsaNI	GTAC	6 cut(s)	103, 319, 437, 494, 1299, 1442
SapI	GCTCTTC	1 cut(s)	341
SaqAI	TTAA	7 cut(s)	278, 663, 750, 795, 810, 869, 1487
Sau96I	GGNCC	6 cut(s)	118, 432, 578, 1147, 1646, 1795
SbfI	CCTGCAGG	1 cut(s)	1330
SchI	GAGTC	5 cut(s)	46, 1260, 1556, 1585, 1832
ScrFI	CCNGG	8 cut(s)	185, 380, 1242, 1254, 1305, 1359, 1371, 1425
SdaI	CCTGCAGG	1 cut(s)	1330
SduI	GDGCHC	2 cut(s)	1207, 1261
SfaNI	GCATC	8 cut(s)	244, 451, 725, 1327, 1353, 1575, 1701, 1822
SfcI	CTRYAG	2 cut(s)	648, 1326
SfuI	TTCGAA	2 cut(s)	613, 756
SinI	GGWCC	4 cut(s)	118, 432, 578, 1795
SmlI	CTYRAG	3 cut(s)	662, 1513, 1838
SmoI	CTYRAG	3 cut(s)	662, 1513, 1838
SpeI	ACTAGT	1 cut(s)	695
SphI	GCATGC	1 cut(s)	550
Sse8387I	CCTGCAGG	1 cut(s)	1330
SspI	AATATT	1 cut(s)	619
SspMI	CTAG	4 cut(s)	696, 732, 1263, 1626
StyD4I	CCNGG	8 cut(s)	183, 378, 1240, 1252, 1303, 1357, 1369, 1423
StyI	CCWWGG	2 cut(s)	267, 1564
TaaI	ACNGT	5 cut(s)	127, 436, 498, 1496, 1604
TaiI	ACGT	4 cut(s)	96, 108, 1140, 1189
TaqI	TCGA	5 cut(s)	589, 613, 756, 1174, 1821
TatI	WGTACW	1 cut(s)	318
TauI	GCSGC	4 cut(s)	8, 11, 1455, 1483
TfiI	GAWTC	3 cut(s)	512, 894, 1699
Tru1I	TTAA	7 cut(s)	278, 663, 750, 795, 810, 869, 1487
Tru9I	TTAA	7 cut(s)	278, 663, 750, 795, 810, 869, 1487
TscAI	CASTG	2 cut(s)	472, 1656
TseFI	GTSAC	4 cut(s)	49, 1618, 1771, 1897
Tsp45I	GTSAC	4 cut(s)	49, 1618, 1771, 1897
TspDTI	ATGAA	8 cut(s)	597, 669, 732, 1113, 1118, 1238, 1378, 1862
TspGWI	ACGGA	3 cut(s)	562, 1138, 1554
TspRI	CASTG	2 cut(s)	472, 1656
Vha464I	CTTAAG	1 cut(s)	662
VpaK11BI	GGWCC	4 cut(s)	118, 432, 578, 1795
XapI	RAATTY	6 cut(s)	280, 361, 604, 631, 989, 1236
XbaI	TCTAGA	1 cut(s)	731
XceI	RCATGY	1 cut(s)	550
XspI	CTAG	4 cut(s)	696, 732, 1263, 1626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.