Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002249

Physical Location & Seq

Genomic Coordinates Forward (+)

10155637 .. 10162442

Gene Structure 6806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00007960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

ATGTTCAATCTGAACCGCAAAACCACTCCACGCTACTTCGCTTTCGCCCTTCTTCTTCTCTACGTGTCGTCAACGCCGCCGTCCTCATCATCATCACCGCCGCCGTCACTCTCTCTCCGGATCAGAAAACCAAGCCTCCGAGTGGTTTTTGAGTTATCATATGAACTGGTTGTGACTTCTGTAGCTATCGAGCGTAGGCTTGATTTAGAAAGAATGATACTGATATTATGTTCTGACATGTTGACATTTGTTTTATACATAATACATCTTGATTGCACTTGGGAATCTTCAGTCGAGGAAGTCTACACTGAACAGCATCAGCAGCAAACAAATGGGATAGAGAGCTATGCATATAATATACAAACAGCTGGGAAGCATGACAAAGAACATCAGTCATTGGATATTCTCAGTTTACTTAACTTGTCAAAAGTCTCCCAAGAACAGAAATCTGCTTGCCCCAATGGAAGGGAAGATATAGAAATCAATGCTTCAAGAGTGACATATGATCTTTCAGAGGATCCACTAAGAATTGCTTCAAAGATGGCTGCTCCTCCCACTTCTGTTAAATTTAACAAAGCAAGAGCCGAATCAGGCTTCCATTTGGAGGTTGCATCTCCAAAAAAGGCTATCGCTACTGCTCCTGATAATCACAGAAAGTCTTTCAATGAAATGTATTCTAAACCACATAACTCGAGGACACCTGTTGAGCAGCTATCAGAGTCTTGTGTGCTTGATTTTTTCGGCAATGATGGATTGGAGGATGACTATGTAGAAGGAAGTCCAGTCCATGAAGCTCACGTTGCATTTTCAGTTGAAGGTTTGGGAAAAGTGGGAATGGAAACACCGGTCCATTCACCAAAACAACCTAGAAGGACCTTCTCCTATGATTGCTCCACACCATTGCACGGTGCAAGGAAAGTGAACTCATTCAAGAACTTGAAGCGTCTGGATGATATTGAAATTGAAATGGACACAGTAATGCAAGATATCACTATGCCCCTTAGTAGCAATGATGTAGAGTTCTCTGAGGATTTAATGGATTCAATCAGTAATCCAAAGAAGAAATTCTCCACTTTCAGAAATTGCACACAATATGATGGTCATGATAGTAAATTTGAAACCTATTATGGAGGCAGAAGAATATTTGACGATATTGAAAATGGCAACAAAGACAGATGGGATGGTAGGTATAACTACCTTGAGGAAGACTCTTTTAATGAATGGGAACATGATTTTTCATTGGGGAGGCCAAGTGAAGTGAACCGTAGATCTGTTGATAATATGATGCATGGAGAGTATGGGATGTCAGATTTCACTTTTGAAGAACCTTTTTCCCCAACGAGGTTTTGTTCAAGCATAACAGACAAGTTCAACATCCTAGAGTCACCTTCATACTCAAAGCACCAAGTATTAGAGAATGATCTTGATTTTATATTTTCCACCAGGGCAAGAGAGCATACACGAAGGAAATTTAATTTTGGAGGTGTAGCCAGTCGACCGGATTGGTCTTGCTTTGCAACTGAATATGATAGGGATCATGTGAGCCTACTGAGTGAAGAGTCATGCTCATCAAGTGCAGTGAGGGTCAATGCAACTGATGATTCACTGCCAAAGTCAACCAGAAAACACAGTAAGAGAAGACATGGCAATTCATATGCCGACCCTGAACATAAATATCATGTGGACATAACTTCTATGGAAAGGACACAAGACAGAAGCAGGGATTTTTTTCAACAGAATAATATTGCACATGGATCAGGGAGATGTACAAATATGTCAAAATCATCAAAGTTTAAACCCTCCCACCACTCAAACACTCCTTTCCACGAAAAGTCAACCCCAAACAGCAATTGGAGGTCTGAGGAAAGATACATGTCAGTTGATATAGATTCGGGTTCCAGTTCTTTCCATCAAAATTCCTGTCCATCAGCAGGCTCTAAGCCTTTGTCTCGAGATCCTTTCAGTGCATTCGATTGCCCAGAATTACATGTGGATGCCAGACCTTCAGAACACTGTGAACCTGTTGCGAGTTCACCTTCAGGCAGTTTTATCTCTCAGAAATTTGCATTTCATGACTCTCCTCCTGTAACCTCTAACATTGGGTGTGGACCAACAAAACCAAATCTTTTTCCATGTTCACATGATCAGACCCCATCTCCTGATTTGTCAGCACAAGAAAGTTTTAGCAAGGCCGAGGAGGGAAAAGTCAAATTCCAGCCCAAAGAAAAATCTAGACAGGAGGAAGAAAATGCTATTCTGAACAACTTGCTCACAGAAAGTGTAGATGCAGCAAGTGCTTTACGATCAAAGAACAAGTACAGTGAATGCAAGAAAGCAAAGGATGCAGATTCAGGACGAAATGAGGGAAGTATAAAAGCAACCTATATGCCTGACCATACTGAGGAGGCATCATCGTTTTTGAAGAGTCCAGATAAAATTCAAAACACAGTGGATGAAAAAGATCGGAACAAAGAGATGGAAGATTCTGAGCCTCAGGAAAGAAAGAAGGAAAGTAAACAGCAAAGTGAATTCGTTGACTCATCTTCTCAGGTTCTGATGCTTCAGAGCTATGTTCTTCAGTTTCTTTGTGTGCAGAAGGTATTGAAGGACGCAGCTGCACAGAATAGCATGAAGAAAATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

880

Amino Acids

99.79

Weight (kDa)

5.79

Isoelectric Point (pI)

64.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480
fragaria_vesca	FvH4_3g40550 FvH4_3g40550
malus_domestica	MD11G1053100.v1.1 MD11G1053200.v1.1 MD11G1053300.v1.1
prunus_persica	Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1
pyrus_communis	pycom11g04320
rosa_chinensis	RchiOBHm_Chr5g0073231
rosa_laevigata	RLG00000036376
rosa_multiflora	Rmu_sc0001887.1_g000014
rosa_roxburghii	Rroxscaffold_1G00007960
rosa_rugosa	Rorug05G0422400 Rorug05G0422500
rosa_samantha	Rh5AG479200 Rh5BG499900 Rh5CG523100 Rh5DG512000
rosa_wichuraiana	Rw5G044550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	303, 1495
AccIII	TCCGGA	1 cut(s)	117
AciI	CCGC	4 cut(s)	16, 77, 98, 101
AclWI	GGATC	6 cut(s)	128, 512, 525, 1542, 1762, 1949
AcsI	RAATTY	9 cut(s)	566, 1064, 1112, 1469, 1915, 2060, 2210, 2436, 2528
AcuI	CTGAAG	5 cut(s)	273, 1989, 2022, 2546, 2561
AfaI	GTAC	2 cut(s)	1768, 2318
AfiI	CCNNNNNNNGG	7 cut(s)	142, 465, 604, 905, 1341, 1931, 2401
AflIII	ACRYGT	4 cut(s)	63, 237, 1872, 1987
AgeI	ACCGGT	1 cut(s)	844
AjnI	CCWGG	1 cut(s)	1442
AluBI	AGCT	7 cut(s)	185, 345, 368, 712, 794, 2568, 2615
AluI	AGCT	7 cut(s)	185, 345, 368, 712, 794, 2568, 2615
Alw26I	GTCTC	2 cut(s)	436, 1953
AlwI	GGATC	6 cut(s)	128, 512, 525, 1542, 1762, 1949
AlwNI	CAGNNNCTG	1 cut(s)	2554
Ama87I	CYCGRG	2 cut(s)	691, 1950
Aor13HI	TCCGGA	1 cut(s)	117
AoxI	GGCC	2 cut(s)	1247, 2190
ApeKI	GCWGC	6 cut(s)	322, 545, 709, 2288, 2612, 2615
ApoI	RAATTY	9 cut(s)	566, 1064, 1112, 1469, 1915, 2060, 2210, 2436, 2528
ArsI	GACNNNNNNTTYG	2 cut(s)	1906, 1938
AsiGI	ACCGGT	1 cut(s)	844
Asp700I	GAANNNNTTC	3 cut(s)	532, 926, 1064
AspS9I	GGNCC	3 cut(s)	847, 873, 2108
AsuHPI	GGTGA	4 cut(s)	87, 846, 1377, 2025
AvaI	CYCGRG	2 cut(s)	691, 1950
AvaII	GGWCC	3 cut(s)	847, 873, 2108
AxyI	CCTNAGG	1 cut(s)	2493
BamHI	GGATCC	1 cut(s)	517
BbsI	GAAGAC	2 cut(s)	1212, 1645
BbvI	GCAGC	6 cut(s)	334, 532, 721, 2300, 2602, 2624
BccI	CCATC	9 cut(s)	535, 743, 1091, 1170, 1175, 1917, 1933, 2161, 2470
BceAI	ACGGC	2 cut(s)	64, 88
BciT130I	CCWGG	1 cut(s)	1444
BclI	TGATCA	1 cut(s)	2143
BcoDI	GTCTC	2 cut(s)	436, 1953
BfaI	CTAG	3 cut(s)	867, 1379, 2232
BfmI	CTRYAG	1 cut(s)	180
BglII	AGATCT	1 cut(s)	1268
BisI	GCNGC	8 cut(s)	77, 101, 323, 546, 710, 2289, 2613, 2616
BlsI	GCNGC	8 cut(s)	78, 102, 324, 547, 711, 2290, 2614, 2617
Bme1390I	CCNGG	1 cut(s)	1444
Bme18I	GGWCC	3 cut(s)	847, 873, 2108
BmeT110I	CYCGRG	2 cut(s)	691, 1950
BmgT120I	GGNCC	3 cut(s)	847, 873, 2108
BmiI	GGNNCC	2 cut(s)	519, 1897
BmrFI	CCNGG	1 cut(s)	1444
BmsI	GCATC	8 cut(s)	325, 620, 1275, 1984, 2275, 2332, 2417, 2547
BpiI	GAAGAC	2 cut(s)	1212, 1645
BplI	GAGNNNNNCTC	4 cut(s)	1193, 1225, 1550, 1582
BpuEI	CTTGAG	1 cut(s)	1220
BsaAI	YACGTR	1 cut(s)	64
BsaBI	GATNNNNATC	1 cut(s)	1533
BsaJI	CCNNGG	2 cut(s)	1443, 2193
BsaWI	WCCGGW	3 cut(s)	117, 844, 1498
BsaXI	ACNNNNNCTCC	8 cut(s)	99, 120, 129, 150, 1237, 1267, 2140, 2170
Bsc4I	CCNNNNNNNGG	7 cut(s)	142, 465, 604, 905, 1341, 1931, 2401
Bse118I	RCCGGY	1 cut(s)	844
Bse1I	ACTGG	4 cut(s)	171, 782, 1491, 1899
Bse21I	CCTNAGG	1 cut(s)	2493
Bse3DI	GCAATG	3 cut(s)	751, 899, 1015
Bse8I	GATNNNNATC	1 cut(s)	1533
BseAI	TCCGGA	1 cut(s)	117
BseBI	CCWGG	1 cut(s)	1444
BseDI	CCNNGG	2 cut(s)	1443, 2193
BseGI	GGATG	8 cut(s)	766, 955, 1186, 1308, 1374, 1999, 2347, 2458
BseJI	GATNNNNATC	1 cut(s)	1533
BseLI	CCNNNNNNNGG	7 cut(s)	142, 465, 604, 905, 1341, 1931, 2401
BseMI	GCAATG	3 cut(s)	751, 899, 1015
BseMII	CTCAG	9 cut(s)	421, 1017, 1541, 1851, 2069, 2391, 2478, 2507, 2561
BseNI	ACTGG	4 cut(s)	171, 782, 1491, 1899
BseRI	GAGGAG	4 cut(s)	540, 2070, 2210, 2417
BseXI	GCAGC	6 cut(s)	334, 532, 721, 2300, 2602, 2624
BseYI	CCCAGC	1 cut(s)	368
BsgI	GTGCAG	3 cut(s)	1596, 2601, 2612
Bsh1285I	CGRYCG	1 cut(s)	1499
BshFI	GGCC	2 cut(s)	1249, 2192
BshTI	ACCGGT	1 cut(s)	844
BsiEI	CGRYCG	1 cut(s)	1499
BsiHKCI	CYCGRG	2 cut(s)	691, 1950
BsiSI	CCGG	3 cut(s)	118, 845, 1499
BslI	CCNNNNNNNGG	7 cut(s)	142, 465, 604, 905, 1341, 1931, 2401
BsmAI	GTCTC	2 cut(s)	436, 1953
BsmI	GAATGC	2 cut(s)	1967, 2330
BsnI	GGCC	2 cut(s)	1249, 2192
BsoBI	CYCGRG	2 cut(s)	691, 1950
Bsp13I	TCCGGA	1 cut(s)	117
Bsp1407I	TGTACA	1 cut(s)	1766
BspACI	CCGC	4 cut(s)	16, 77, 98, 101
BspANI	GGCC	2 cut(s)	1249, 2192
BspCNI	CTCAG	9 cut(s)	420, 1018, 1542, 1852, 2068, 2392, 2479, 2506, 2560
BspEI	TCCGGA	1 cut(s)	117
BspHI	TCATGA	2 cut(s)	1102, 2071
BspLI	GGNNCC	2 cut(s)	519, 1897
BspPI	GGATC	6 cut(s)	128, 512, 525, 1542, 1762, 1949
BsrDI	GCAATG	3 cut(s)	751, 899, 1015
BsrFI	RCCGGY	1 cut(s)	844
BsrGI	TGTACA	1 cut(s)	1766
BsrI	ACTGG	4 cut(s)	171, 782, 1491, 1899
BssAI	RCCGGY	1 cut(s)	844
BssECI	CCNNGG	2 cut(s)	1443, 2193
Bst2UI	CCWGG	1 cut(s)	1444
Bst4CI	ACNGT	7 cut(s)	908, 976, 1265, 1631, 2015, 2321, 2449
Bst6I	CTCTTC	2 cut(s)	1551, 2417
BstAPI	GCANNNNNTGC	2 cut(s)	2294, 2342
BstAUI	TGTACA	1 cut(s)	1766
BstBAI	YACGTR	1 cut(s)	64
BstC8I	GCNNGC	2 cut(s)	454, 1933
BstF5I	GGATG	8 cut(s)	766, 955, 1186, 1308, 1374, 1999, 2347, 2458
BstMAI	GTCTC	2 cut(s)	436, 1953
BstMCI	CGRYCG	1 cut(s)	1499
BstMWI	GCNNNNNNNGC	4 cut(s)	322, 800, 2294, 2342
BstNI	CCWGG	1 cut(s)	1444
BstNSI	RCATGY	3 cut(s)	241, 1876, 1991
BstSCI	CCNGG	1 cut(s)	1442
BstSFI	CTRYAG	1 cut(s)	180
BstV1I	GCAGC	6 cut(s)	334, 532, 721, 2300, 2602, 2624
BstV2I	GAAGAC	2 cut(s)	1212, 1645
BstX2I	RGATCY	3 cut(s)	517, 1268, 1954
BstYI	RGATCY	3 cut(s)	517, 1268, 1954
Bsu36I	CCTNAGG	1 cut(s)	2493
BsuRI	GGCC	2 cut(s)	1249, 2192
BtsCI	GGATG	8 cut(s)	766, 955, 1186, 1308, 1374, 1999, 2347, 2458
BtsI	GCAGTG	2 cut(s)	1584, 1604
BtsIMutI	CAGTG	7 cut(s)	306, 1584, 1604, 1969, 2011, 2326, 2454
Cac8I	GCNNGC	2 cut(s)	454, 1933
CaiI	CAGNNNCTG	1 cut(s)	2554
CciI	TCATGA	2 cut(s)	1102, 2071
Cfr10I	RCCGGY	1 cut(s)	844
Cfr13I	GGNCC	3 cut(s)	847, 873, 2108
CseI	GACGC	2 cut(s)	932, 2618
Csp6I	GTAC	2 cut(s)	1767, 2317
CspAI	ACCGGT	1 cut(s)	844
CviQI	GTAC	2 cut(s)	1767, 2317
DraI	TTTAAA	1 cut(s)	1795
Eam1104I	CTCTTC	2 cut(s)	1551, 2417
EarI	CTCTTC	2 cut(s)	1551, 2417
Eco32I	GATATC	1 cut(s)	988
Eco47I	GGWCC	3 cut(s)	847, 873, 2108
Eco57I	CTGAAG	5 cut(s)	273, 1989, 2022, 2546, 2561
Eco81I	CCTNAGG	1 cut(s)	2493
Eco88I	CYCGRG	2 cut(s)	691, 1950
EcoO109I	RGGNCCY	1 cut(s)	873
EcoRI	GAATTC	1 cut(s)	2528
EcoRII	CCWGG	1 cut(s)	1442
EcoRV	GATATC	1 cut(s)	988
EcoT22I	ATGCAT	2 cut(s)	352, 1290
FalI	AAGNNNNNCTT	2 cut(s)	517, 549
FauNDI	CATATG	3 cut(s)	160, 502, 1654
FbaI	TGATCA	1 cut(s)	2143
FblI	GTMKAC	2 cut(s)	303, 1495
Fnu4HI	GCNGC	8 cut(s)	77, 101, 323, 546, 710, 2289, 2613, 2616
FokI	GGATG	8 cut(s)	773, 962, 1193, 1315, 1361, 2006, 2354, 2465
Fsp4HI	GCNGC	8 cut(s)	77, 101, 323, 546, 710, 2289, 2613, 2616
FspBI	CTAG	3 cut(s)	867, 1379, 2232
GluI	GCNGC	8 cut(s)	77, 101, 323, 546, 710, 2289, 2613, 2616
GsaI	CCCAGC	1 cut(s)	372
HaeIII	GGCC	2 cut(s)	1249, 2192
HapII	CCGG	3 cut(s)	118, 845, 1499
HgaI	GACGC	2 cut(s)	932, 2618
HincII	GTYRAC	6 cut(s)	72, 243, 1496, 1617, 1836, 2536
HindII	GTYRAC	6 cut(s)	72, 243, 1496, 1617, 1836, 2536
HpaII	CCGG	3 cut(s)	118, 845, 1499
HphI	GGTGA	4 cut(s)	87, 846, 1377, 2025
HpyCH4III	ACNGT	7 cut(s)	908, 976, 1265, 1631, 2015, 2321, 2449
HpyCH4IV	ACGT	2 cut(s)	63, 798
HpyF10VI	GCNNNNNNNGC	4 cut(s)	322, 800, 2294, 2342
HpySE526I	ACGT	2 cut(s)	63, 798
Kpn2I	TCCGGA	1 cut(s)	117
Ksp22I	TGATCA	1 cut(s)	2143
LmnI	GCTCC	3 cut(s)	553, 643, 896
Lsp1109I	GCAGC	6 cut(s)	334, 532, 721, 2300, 2602, 2624
LweI	GCATC	8 cut(s)	325, 620, 1275, 1984, 2275, 2332, 2417, 2547
MaeI	CTAG	3 cut(s)	867, 1379, 2232
MaeII	ACGT	2 cut(s)	63, 798
MaeIII	GTNAC	5 cut(s)	105, 172, 496, 1383, 2086
MfeI	CAATTG	1 cut(s)	1849
MflI	RGATCY	3 cut(s)	517, 1268, 1954
MlyI	GAGTC	7 cut(s)	728, 1202, 1391, 1568, 2069, 2434, 2531
Mph1103I	ATGCAT	2 cut(s)	352, 1290
MroI	TCCGGA	1 cut(s)	117
MroXI	GAANNNNTTC	3 cut(s)	532, 926, 1064
MseI	TTAA	7 cut(s)	417, 564, 570, 1034, 1215, 1473, 1794
MslI	CAYNNNNRTG	2 cut(s)	977, 1992
MspA1I	CMGCKG	2 cut(s)	368, 2615
MspI	CCGG	3 cut(s)	118, 845, 1499
MspR9I	CCNGG	1 cut(s)	1444
MssI	GTTTAAAC	1 cut(s)	1795
MunI	CAATTG	1 cut(s)	1849
Mva1269I	GAATGC	2 cut(s)	1967, 2330
MvaI	CCWGG	1 cut(s)	1444
MwoI	GCNNNNNNNGC	4 cut(s)	322, 800, 2294, 2342
NdeI	CATATG	3 cut(s)	160, 502, 1654
NlaIV	GGNNCC	2 cut(s)	519, 1897
NmeAIII	GCCGAG	1 cut(s)	2218
NmuCI	GTSAC	4 cut(s)	105, 172, 496, 1383
NsiI	ATGCAT	2 cut(s)	352, 1290
NspI	RCATGY	3 cut(s)	241, 1876, 1991
PaeR7I	CTCGAG	2 cut(s)	691, 1950
PagI	TCATGA	2 cut(s)	1102, 2071
PciI	ACATGT	3 cut(s)	237, 1872, 1987
PctI	GAATGC	2 cut(s)	1967, 2330
PdmI	GAANNNNTTC	3 cut(s)	532, 926, 1064
PfeI	GAWTC	7 cut(s)	284, 587, 1040, 1601, 1889, 2348, 2483
PinAI	ACCGGT	1 cut(s)	844
PkrI	GCNGC	8 cut(s)	78, 102, 324, 547, 711, 2290, 2614, 2617
PleI	GAGTC	7 cut(s)	727, 1202, 1390, 1567, 2069, 2433, 2531
PmeI	GTTTAAAC	1 cut(s)	1795
PpsI	GAGTC	7 cut(s)	727, 1202, 1390, 1567, 2069, 2433, 2531
Ppu21I	YACGTR	1 cut(s)	64
PpuMI	RGGWCCY	1 cut(s)	873
PscI	ACATGT	3 cut(s)	237, 1872, 1987
Psp5II	RGGWCCY	1 cut(s)	873
Psp6I	CCWGG	1 cut(s)	1442
PspFI	CCCAGC	1 cut(s)	368
PspGI	CCWGG	1 cut(s)	1442
PspN4I	GGNNCC	2 cut(s)	519, 1897
PspPI	GGNCC	3 cut(s)	847, 873, 2108
PspPPI	RGGWCCY	1 cut(s)	873
PspXI	VCTCGAGB	1 cut(s)	691
PstNI	CAGNNNCTG	1 cut(s)	2554
PsuI	RGATCY	3 cut(s)	517, 1268, 1954
PvuII	CAGCTG	2 cut(s)	368, 2615
RsaI	GTAC	2 cut(s)	1768, 2318
RsaNI	GTAC	2 cut(s)	1767, 2317
RseI	CAYNNNNRTG	2 cut(s)	977, 1992
SalI	GTCGAC	1 cut(s)	1494
SaqAI	TTAA	7 cut(s)	417, 564, 570, 1034, 1215, 1473, 1794
SatI	GCNGC	8 cut(s)	77, 101, 323, 546, 710, 2289, 2613, 2616
Sau96I	GGNCC	3 cut(s)	847, 873, 2108
SchI	GAGTC	7 cut(s)	728, 1202, 1391, 1568, 2069, 2434, 2531
ScrFI	CCNGG	1 cut(s)	1444
SfaNI	GCATC	8 cut(s)	325, 620, 1275, 1984, 2275, 2332, 2417, 2547
SfcI	CTRYAG	1 cut(s)	180
Sfr274I	CTCGAG	2 cut(s)	691, 1950
SinI	GGWCC	3 cut(s)	847, 873, 2108
SlaI	CTCGAG	2 cut(s)	691, 1950
SmiMI	CAYNNNNRTG	2 cut(s)	977, 1992
SmlI	CTYRAG	3 cut(s)	691, 1199, 1950
SmoI	CTYRAG	3 cut(s)	691, 1199, 1950
SsiI	CCGC	4 cut(s)	16, 77, 98, 101
SspI	AATATT	2 cut(s)	1143, 1744
SspMI	CTAG	3 cut(s)	867, 1379, 2232
StyD4I	CCNGG	1 cut(s)	1442
TaaI	ACNGT	7 cut(s)	908, 976, 1265, 1631, 2015, 2321, 2449
TaiI	ACGT	2 cut(s)	66, 801
TaqI	TCGA	6 cut(s)	189, 294, 692, 1495, 1951, 1971
TatI	WGTACW	2 cut(s)	1766, 2316
TauI	GCSGC	2 cut(s)	79, 103
TfiI	GAWTC	7 cut(s)	284, 587, 1040, 1601, 1889, 2348, 2483
Tru1I	TTAA	7 cut(s)	417, 564, 570, 1034, 1215, 1473, 1794
Tru9I	TTAA	7 cut(s)	417, 564, 570, 1034, 1215, 1473, 1794
TscAI	CASTG	7 cut(s)	313, 1584, 1611, 1969, 2018, 2326, 2454
TseFI	GTSAC	4 cut(s)	105, 172, 496, 1383
TseI	GCWGC	6 cut(s)	322, 545, 709, 2288, 2612, 2615
Tsp45I	GTSAC	4 cut(s)	105, 172, 496, 1383
TspDTI	ATGAA	9 cut(s)	177, 681, 804, 1227, 1233, 1380, 1641, 2060, 2469
TspRI	CASTG	7 cut(s)	313, 1584, 1611, 1969, 2018, 2326, 2454
VpaK11BI	GGWCC	3 cut(s)	847, 873, 2108
XapI	RAATTY	9 cut(s)	566, 1064, 1112, 1469, 1915, 2060, 2210, 2436, 2528
XbaI	TCTAGA	1 cut(s)	2231
XceI	RCATGY	3 cut(s)	241, 1876, 1991
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1848
XhoI	CTCGAG	2 cut(s)	691, 1950
XmiI	GTMKAC	2 cut(s)	303, 1495
XmnI	GAANNNNTTC	3 cut(s)	532, 926, 1064
XspI	CTAG	3 cut(s)	867, 1379, 2232
Zsp2I	ATGCAT	2 cut(s)	352, 1290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.