Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002249

Physical Location & Seq

Genomic Coordinates Reverse (-)

78187838 .. 78193788

Gene Structure 5951 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G044550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGTTGCAATGGATGGGAGGTTCAAGGAGGAAAGTGAATACTTCGAGGAAGTCTACACTGAACAGGCAAAAACAATATTTTGAACAAAGAAGGCGACAACAACAGCATCAACAGCAAACAAATGGGATAGAGAGCTATGCATATAATATACAAACAGCTGGGAAGCATGACAAAGAACATCAGTCACTGGATATTCTCAGTTTACTCAACTTGTCGAAAGTCTCCCAAGAACAGAAATCTGCTTGCCCCAATGGAAGGGAAGATATAGAAGTCAATGCTTCAAGAGTGAAGTATGATCTTTCAGAGGATCCACTAAGAATTGCTTCAAAGATGGTTGCTCCTCCCACTTCTGTTAAATTTAACAAAGCAAGAGCTGAATCAGGCTTCCATTCGGAGGTTGCATCTCCAAAAAAGGCTATCGCTACTGCTCCTGATAATCACAGAAAGTCTTTCAATGAAATGTATTCTAAACCGCATAACTCAAGGACACCTGTTGAGCAGCAGTCTTGTGTGCTTGATTTTTTCGGCAATGATGGATTGGAGGATGACTATGTAGAAGGAAGTCCAGTCCATGAAGCTCACGTTGCATTTTCAGTTGAAGGTTTGGGAAAAGTGGGAATGGAAACACCGGTCCATTCACCAAAACAACCTGGAAGGACCTTCTCCTATGATTGCTCCACACCATTGCACGGTGCAAGGAAAGTAAACTCATTCAAGAACTTGAAGCGTCTGGATGATATTGAAATTGAAATGGACACAGTAATGCAAGATGTCACTATGCCCCTTAGTAGCAATGATTTAGAGTTCTCTGAGGATTTAATGGATTCATTCAGTAATCCAAAGAAGACATTCTCCACTTTCAGAAATTGCACACAATATGATGGTCATGATAGTAAATTTGAAACCTATTATGGAGGCAGAAGAATATTTGACGATATTGAAAACGGCAACAAAGACAGATGGGATGGTAGGTATAACTACCTTGAGGAACACTCTTTTAATGAATGGGAACATGATTTATCATTGAGGAGGCCAAGTGAAGTGAACCGTAGATCTGTTGATAATATGATGCATGGAGAGTATGGGATGTCAGATTTCACTTTTGAAGAACCCTTTTCCCCAACGAGGTTTTGTTCAAGCATAACAGACAAGTTCAACATCTTAGAGTCACCTTCATACTTGAAGCACCAAGTATTAGAGAATGACCTTGATTTTAAATTTTCCACCGGGGCAAGAGAGCATACTCGAAGGAAATTTGATTTTGGAGGTGTAGCCAGCCGACCTGATTGGTCTTGCTTTGCAACTGAATATGATAGGGATAATGCGAGCCTACTGAGTGAAGAGTCATGCTCATCAAGTGCAGTGAGGGTCAATGCAACTGATGAGTCGCTGCCAAAGTCAACCAGAAAGCACAGTAAGAGAAGACATGGCAATTCATATGCCGACCCTGAACATAAATATCATGTGGACATAACTTCTATGGAAAGGACACAAGACAGAAGCAGGGATTTTTTTCAACAGAAGAATATTGCACATGGATCAGGGAGATGTACAAATATGTCAAAATCATCAAAGTTTAAACCCTCCCACCACTCAAACAGTCCTTTCCACGAAAAGTCAACCCCAAACAGCAATTGGAGGTCTGAGGAAAGATACATGTCAGTTGATATAAATTCGGGTTCCAGTTCTTTCCATCAAAATTCCTGTCCATCAGCAGGCTCTAAGCCTTTGTCTCGAGATCCTTTCAGTGCATTCGATTGCCCCGAATTACATGTGGATGCCAGACCTTCAGAACACTGTGAACCTGTTGCAAGTTCACCTTCAGGCAGTTTTATCTCTCAGAAATTTTCATTTCATGACTCTCCTCCTGTAACCTCTAACATTGGGTGTGGACCAACAAAACCAAATCTTTATCCATGTTCACATGATCAGACCCCATCTCCTGATTTGTCAGCACAAGAAAGTTTTAGCAAGGCCGAGGAGGGAAAAGTGAAATTCCAGCCCAAAGAAAAATCTAGACTGGAGGAAGAAAATGCTATTCTGAACAACTTGCTCACAGAAAGTGTAGATGCAGCAAGTGCTTTACGATCAAAGAACAAGTACAGTGAATGCAAGAAAGCAAAGGATGCAGATTCAGGACAAAATGAGGGAAGTATAAAAGCAACCTATATGCCTGACCATACTGAGGAGGCATCATCGTTTTTGAAGAGTCCAGATAAAATTCAAAACACAGTGGATGAAAAAGAAGAATCCCATCACTCTGAAATTCCTCTTCCATGTCGAAGTCGGAACAAAGAGATGGAAGATTCTGAGCCTCAGGAAAGAAAGAAGGAAAGTAAACAGCAAAGTGAATTCGTTGACTCATCTTCTCCGGTTCTGATGCTTCAGAGCTATGTTCTTCAGTTTCTTTGTGTGCAGAAGGTATTGAAGGACGCAGCTGCACAGAATAGCATGAAGAAAATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

821

Amino Acids

93.23

Weight (kDa)

6.27

Isoelectric Point (pI)

69.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480 AT2G30480
fragaria_vesca	FvH4_3g40550 FvH4_3g40550
malus_domestica	MD11G1053100.v1.1 MD11G1053200.v1.1 MD11G1053300.v1.1
prunus_persica	Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1 Prupe.6G040800_v2.0.a1
pyrus_communis	pycom11g04320
rosa_chinensis	RchiOBHm_Chr5g0073231
rosa_laevigata	RLG00000036376
rosa_multiflora	Rmu_sc0001887.1_g000014
rosa_roxburghii	Rroxscaffold_1G00007960
rosa_rugosa	Rorug05G0422400 Rorug05G0422500
rosa_samantha	Rh5AG479200 Rh5BG499900 Rh5CG523100 Rh5DG512000
rosa_wichuraiana	Rw5G044550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	53
AciI	CCGC	1 cut(s)	473
AclWI	GGATC	4 cut(s)	302, 315, 1546, 1733
AcuI	CTGAAG	4 cut(s)	1773, 1806, 2369, 2384
AfaI	GTAC	2 cut(s)	1552, 2102
AfiI	CCNNNNNNNGG	6 cut(s)	255, 394, 689, 1125, 1715, 2185
AflIII	ACRYGT	2 cut(s)	1656, 1771
AgeI	ACCGGT	1 cut(s)	628
AjnI	CCWGG	1 cut(s)	649
AloI	GAACNNNNNNTCC	1 cut(s)	36
AluBI	AGCT	6 cut(s)	135, 158, 374, 578, 2391, 2438
AluI	AGCT	6 cut(s)	135, 158, 374, 578, 2391, 2438
Alw26I	GTCTC	2 cut(s)	226, 1737
AlwI	GGATC	4 cut(s)	302, 315, 1546, 1733
AlwNI	CAGNNNCTG	1 cut(s)	187
Ama87I	CYCGRG	1 cut(s)	1734
AoxI	GGCC	2 cut(s)	1031, 1974
ApeKI	GCWGC	5 cut(s)	499, 1390, 2072, 2435, 2438
ArsI	GACNNNNNNTTYG	2 cut(s)	1690, 1722
AsiGI	ACCGGT	1 cut(s)	628
Asp700I	GAANNNNTTC	2 cut(s)	322, 848
AspS9I	GGNCC	3 cut(s)	631, 657, 1892
AsuC2I	CCSGG	1 cut(s)	1228
AsuHPI	GGTGA	3 cut(s)	630, 1161, 1809
AvaI	CYCGRG	1 cut(s)	1734
AvaII	GGWCC	3 cut(s)	631, 657, 1892
AxyI	CCTNAGG	1 cut(s)	2316
BamHI	GGATCC	1 cut(s)	307
BbsI	GAAGAC	2 cut(s)	851, 1429
BbvI	GCAGC	5 cut(s)	511, 1377, 2084, 2425, 2447
BceAI	ACGGC	1 cut(s)	961
BciT130I	CCWGG	1 cut(s)	651
BclI	TGATCA	1 cut(s)	1927
BcnI	CCSGG	1 cut(s)	1228
BcoDI	GTCTC	2 cut(s)	226, 1737
BfaI	CTAG	1 cut(s)	2016
BglII	AGATCT	1 cut(s)	1052
BisI	GCNGC	5 cut(s)	500, 1391, 2073, 2436, 2439
BlsI	GCNGC	5 cut(s)	501, 1392, 2074, 2437, 2440
Bme1390I	CCNGG	2 cut(s)	651, 1228
Bme18I	GGWCC	3 cut(s)	631, 657, 1892
BmeT110I	CYCGRG	1 cut(s)	1734
BmgT120I	GGNCC	3 cut(s)	631, 657, 1892
BmiI	GGNNCC	2 cut(s)	309, 1681
BmrFI	CCNGG	2 cut(s)	651, 1228
BmsI	GCATC	8 cut(s)	115, 410, 1059, 1768, 2059, 2116, 2201, 2370
BpiI	GAAGAC	2 cut(s)	851, 1429
BplI	GAGNNNNNCTC	4 cut(s)	977, 1009, 1334, 1366
BpmI	CTGGAG	1 cut(s)	2042
BpuEI	CTTGAG	2 cut(s)	466, 1004
BpuMI	CCSGG	1 cut(s)	1228
BsaJI	CCNNGG	2 cut(s)	1227, 1977
BsaWI	WCCGGW	2 cut(s)	628, 2371
BsaXI	ACNNNNNCTCC	4 cut(s)	1021, 1051, 1924, 1954
Bsc4I	CCNNNNNNNGG	6 cut(s)	255, 394, 689, 1125, 1715, 2185
Bse118I	RCCGGY	1 cut(s)	628
Bse1I	ACTGG	4 cut(s)	192, 566, 1683, 2025
Bse21I	CCTNAGG	1 cut(s)	2316
Bse3DI	GCAATG	4 cut(s)	14, 535, 683, 799
BseBI	CCWGG	1 cut(s)	651
BseDI	CCNNGG	2 cut(s)	1227, 1977
BseGI	GGATG	8 cut(s)	18, 550, 739, 970, 1092, 1783, 2131, 2242
BseLI	CCNNNNNNNGG	6 cut(s)	255, 394, 689, 1125, 1715, 2185
BseMI	GCAATG	4 cut(s)	14, 535, 683, 799
BseMII	CTCAG	8 cut(s)	211, 801, 1325, 1635, 1853, 2175, 2301, 2330
BseNI	ACTGG	4 cut(s)	192, 566, 1683, 2025
BseRI	GAGGAG	5 cut(s)	330, 1042, 1854, 1994, 2201
BseXI	GCAGC	5 cut(s)	511, 1377, 2084, 2425, 2447
BseYI	CCCAGC	1 cut(s)	158
BsgI	GTGCAG	3 cut(s)	1380, 2424, 2435
BshFI	GGCC	2 cut(s)	1033, 1976
BshTI	ACCGGT	1 cut(s)	628
BsiHKCI	CYCGRG	1 cut(s)	1734
BsiSI	CCGG	3 cut(s)	629, 1227, 2372
BslI	CCNNNNNNNGG	6 cut(s)	255, 394, 689, 1125, 1715, 2185
BsmAI	GTCTC	2 cut(s)	226, 1737
BsmI	GAATGC	2 cut(s)	1751, 2114
BsnI	GGCC	2 cut(s)	1033, 1976
BsoBI	CYCGRG	1 cut(s)	1734
Bsp1407I	TGTACA	1 cut(s)	1550
Bsp143I	GATC	7 cut(s)	295, 307, 1052, 1538, 1738, 1927, 2087
BspACI	CCGC	1 cut(s)	473
BspANI	GGCC	2 cut(s)	1033, 1976
BspCNI	CTCAG	8 cut(s)	210, 802, 1326, 1636, 1852, 2176, 2302, 2329
BspHI	TCATGA	2 cut(s)	886, 1855
BspLI	GGNNCC	2 cut(s)	309, 1681
BspPI	GGATC	4 cut(s)	302, 315, 1546, 1733
BsrDI	GCAATG	4 cut(s)	14, 535, 683, 799
BsrFI	RCCGGY	1 cut(s)	628
BsrGI	TGTACA	1 cut(s)	1550
BsrI	ACTGG	4 cut(s)	192, 566, 1683, 2025
BssAI	RCCGGY	1 cut(s)	628
BssECI	CCNNGG	2 cut(s)	1227, 1977
BssMI	GATC	7 cut(s)	295, 307, 1052, 1538, 1738, 1927, 2087
Bst2UI	CCWGG	1 cut(s)	651
Bst4CI	ACNGT	8 cut(s)	692, 760, 1049, 1415, 1601, 1799, 2105, 2233
Bst6I	CTCTTC	3 cut(s)	1335, 2201, 2277
BstAPI	GCANNNNNTGC	2 cut(s)	2078, 2126
BstAUI	TGTACA	1 cut(s)	1550
BstC8I	GCNNGC	4 cut(s)	244, 1276, 1327, 1717
BstF5I	GGATG	8 cut(s)	18, 550, 739, 970, 1092, 1783, 2131, 2242
BstKTI	GATC	7 cut(s)	298, 310, 1055, 1541, 1741, 1930, 2090
BstMAI	GTCTC	2 cut(s)	226, 1737
BstMBI	GATC	7 cut(s)	295, 307, 1052, 1538, 1738, 1927, 2087
BstMWI	GCNNNNNNNGC	4 cut(s)	112, 584, 2078, 2126
BstNI	CCWGG	1 cut(s)	651
BstNSI	RCATGY	2 cut(s)	1660, 1775
BstSCI	CCNGG	2 cut(s)	649, 1226
BstV1I	GCAGC	5 cut(s)	511, 1377, 2084, 2425, 2447
BstV2I	GAAGAC	2 cut(s)	851, 1429
BstX2I	RGATCY	3 cut(s)	307, 1052, 1738
BstYI	RGATCY	3 cut(s)	307, 1052, 1738
Bsu36I	CCTNAGG	1 cut(s)	2316
BsuRI	GGCC	2 cut(s)	1033, 1976
BtsCI	GGATG	8 cut(s)	18, 550, 739, 970, 1092, 1783, 2131, 2242
BtsI	GCAGTG	1 cut(s)	1368
BtsIMutI	CAGTG	7 cut(s)	56, 185, 1368, 1753, 1795, 2110, 2238
Cac8I	GCNNGC	4 cut(s)	244, 1276, 1327, 1717
CaiI	CAGNNNCTG	1 cut(s)	187
CciI	TCATGA	2 cut(s)	886, 1855
Cfr10I	RCCGGY	1 cut(s)	628
Cfr13I	GGNCC	3 cut(s)	631, 657, 1892
CseI	GACGC	2 cut(s)	716, 2441
Csp6I	GTAC	2 cut(s)	1551, 2101
CspAI	ACCGGT	1 cut(s)	628
CviQI	GTAC	2 cut(s)	1551, 2101
DpnI	GATC	7 cut(s)	297, 309, 1054, 1540, 1740, 1929, 2089
DpnII	GATC	7 cut(s)	295, 307, 1052, 1538, 1738, 1927, 2087
DraI	TTTAAA	2 cut(s)	1216, 1579
Eam1104I	CTCTTC	3 cut(s)	1335, 2201, 2277
EarI	CTCTTC	3 cut(s)	1335, 2201, 2277
Eco47I	GGWCC	3 cut(s)	631, 657, 1892
Eco57I	CTGAAG	4 cut(s)	1773, 1806, 2369, 2384
Eco81I	CCTNAGG	1 cut(s)	2316
Eco88I	CYCGRG	1 cut(s)	1734
EcoO109I	RGGNCCY	1 cut(s)	657
EcoRI	GAATTC	1 cut(s)	2351
EcoRII	CCWGG	1 cut(s)	649
EcoT22I	ATGCAT	2 cut(s)	142, 1074
FalI	AAGNNNNNCTT	4 cut(s)	307, 339, 1804, 1836
FauNDI	CATATG	1 cut(s)	1438
FbaI	TGATCA	1 cut(s)	1927
FblI	GTMKAC	1 cut(s)	53
Fnu4HI	GCNGC	5 cut(s)	500, 1391, 2073, 2436, 2439
FokI	GGATG	8 cut(s)	25, 557, 746, 977, 1099, 1790, 2138, 2249
Fsp4HI	GCNGC	5 cut(s)	500, 1391, 2073, 2436, 2439
FspBI	CTAG	1 cut(s)	2016
GluI	GCNGC	5 cut(s)	500, 1391, 2073, 2436, 2439
GsaI	CCCAGC	1 cut(s)	162
GsuI	CTGGAG	1 cut(s)	2042
HaeIII	GGCC	2 cut(s)	1033, 1976
HapII	CCGG	3 cut(s)	629, 1227, 2372
HgaI	GACGC	2 cut(s)	716, 2441
HincII	GTYRAC	3 cut(s)	1401, 1620, 2359
HindII	GTYRAC	3 cut(s)	1401, 1620, 2359
HpaII	CCGG	3 cut(s)	629, 1227, 2372
HphI	GGTGA	3 cut(s)	630, 1161, 1809
HpyCH4III	ACNGT	8 cut(s)	692, 760, 1049, 1415, 1601, 1799, 2105, 2233
HpyCH4IV	ACGT	1 cut(s)	582
HpyF10VI	GCNNNNNNNGC	4 cut(s)	112, 584, 2078, 2126
HpySE526I	ACGT	1 cut(s)	582
Ksp22I	TGATCA	1 cut(s)	1927
Kzo9I	GATC	7 cut(s)	295, 307, 1052, 1538, 1738, 1927, 2087
LmnI	GCTCC	3 cut(s)	343, 433, 680
Lsp1109I	GCAGC	5 cut(s)	511, 1377, 2084, 2425, 2447
LweI	GCATC	8 cut(s)	115, 410, 1059, 1768, 2059, 2116, 2201, 2370
MaeI	CTAG	1 cut(s)	2016
MaeII	ACGT	1 cut(s)	582
MaeIII	GTNAC	4 cut(s)	183, 772, 1167, 1870
MalI	GATC	7 cut(s)	297, 309, 1054, 1540, 1740, 1929, 2089
MboI	GATC	7 cut(s)	295, 307, 1052, 1538, 1738, 1927, 2087
MfeI	CAATTG	1 cut(s)	1633
MflI	RGATCY	3 cut(s)	307, 1052, 1738
MlyI	GAGTC	6 cut(s)	1175, 1352, 1394, 1853, 2218, 2354
MmeI	TCCRAC	1 cut(s)	2267
Mph1103I	ATGCAT	2 cut(s)	142, 1074
MroXI	GAANNNNTTC	2 cut(s)	322, 848
MseI	TTAA	6 cut(s)	354, 360, 818, 999, 1215, 1578
MslI	CAYNNNNRTG	2 cut(s)	761, 1776
MspA1I	CMGCKG	2 cut(s)	158, 2438
MspI	CCGG	3 cut(s)	629, 1227, 2372
MspR9I	CCNGG	2 cut(s)	651, 1228
MssI	GTTTAAAC	1 cut(s)	1579
MunI	CAATTG	1 cut(s)	1633
Mva1269I	GAATGC	2 cut(s)	1751, 2114
MvaI	CCWGG	1 cut(s)	651
MwoI	GCNNNNNNNGC	4 cut(s)	112, 584, 2078, 2126
NciI	CCSGG	1 cut(s)	1228
NdeI	CATATG	1 cut(s)	1438
NdeII	GATC	7 cut(s)	295, 307, 1052, 1538, 1738, 1927, 2087
NlaIV	GGNNCC	2 cut(s)	309, 1681
NmeAIII	GCCGAG	1 cut(s)	2002
NmuCI	GTSAC	3 cut(s)	183, 772, 1167
NsiI	ATGCAT	2 cut(s)	142, 1074
NspI	RCATGY	2 cut(s)	1660, 1775
PaeR7I	CTCGAG	1 cut(s)	1734
PagI	TCATGA	2 cut(s)	886, 1855
PciI	ACATGT	2 cut(s)	1656, 1771
PcsI	WCGNNNNNNNCGW	1 cut(s)	1761
PctI	GAATGC	2 cut(s)	1751, 2114
PdmI	GAANNNNTTC	2 cut(s)	322, 848
PfeI	GAWTC	5 cut(s)	377, 824, 2132, 2249, 2306
PinAI	ACCGGT	1 cut(s)	628
PkrI	GCNGC	5 cut(s)	501, 1392, 2074, 2437, 2440
PleI	GAGTC	6 cut(s)	1174, 1351, 1393, 1853, 2217, 2354
PmeI	GTTTAAAC	1 cut(s)	1579
PpsI	GAGTC	6 cut(s)	1174, 1351, 1393, 1853, 2217, 2354
PpuMI	RGGWCCY	1 cut(s)	657
PscI	ACATGT	2 cut(s)	1656, 1771
Psp5II	RGGWCCY	1 cut(s)	657
Psp6I	CCWGG	1 cut(s)	649
PspFI	CCCAGC	1 cut(s)	158
PspGI	CCWGG	1 cut(s)	649
PspN4I	GGNNCC	2 cut(s)	309, 1681
PspPI	GGNCC	3 cut(s)	631, 657, 1892
PspPPI	RGGWCCY	1 cut(s)	657
PstNI	CAGNNNCTG	1 cut(s)	187
PsuI	RGATCY	3 cut(s)	307, 1052, 1738
PvuII	CAGCTG	2 cut(s)	158, 2438
RsaI	GTAC	2 cut(s)	1552, 2102
RsaNI	GTAC	2 cut(s)	1551, 2101
RseI	CAYNNNNRTG	2 cut(s)	761, 1776
SaqAI	TTAA	6 cut(s)	354, 360, 818, 999, 1215, 1578
SatI	GCNGC	5 cut(s)	500, 1391, 2073, 2436, 2439
Sau3AI	GATC	7 cut(s)	295, 307, 1052, 1538, 1738, 1927, 2087
Sau96I	GGNCC	3 cut(s)	631, 657, 1892
SchI	GAGTC	6 cut(s)	1175, 1352, 1394, 1853, 2218, 2354
ScrFI	CCNGG	2 cut(s)	651, 1228
SfaNI	GCATC	8 cut(s)	115, 410, 1059, 1768, 2059, 2116, 2201, 2370
Sfr274I	CTCGAG	1 cut(s)	1734
SinI	GGWCC	3 cut(s)	631, 657, 1892
SlaI	CTCGAG	1 cut(s)	1734
SmiMI	CAYNNNNRTG	2 cut(s)	761, 1776
SmlI	CTYRAG	3 cut(s)	481, 983, 1734
SmoI	CTYRAG	3 cut(s)	481, 983, 1734
SsiI	CCGC	1 cut(s)	473
SspI	AATATT	3 cut(s)	77, 927, 1528
SspMI	CTAG	1 cut(s)	2016
StyD4I	CCNGG	2 cut(s)	649, 1226
TaaI	ACNGT	8 cut(s)	692, 760, 1049, 1415, 1601, 1799, 2105, 2233
TaiI	ACGT	1 cut(s)	585
TaqI	TCGA	6 cut(s)	44, 215, 1246, 1735, 1755, 2281
TatI	WGTACW	2 cut(s)	1550, 2100
TfiI	GAWTC	5 cut(s)	377, 824, 2132, 2249, 2306
Tru1I	TTAA	6 cut(s)	354, 360, 818, 999, 1215, 1578
Tru9I	TTAA	6 cut(s)	354, 360, 818, 999, 1215, 1578
TscAI	CASTG	7 cut(s)	63, 192, 1368, 1753, 1802, 2110, 2238
TseFI	GTSAC	3 cut(s)	183, 772, 1167
TseI	GCWGC	5 cut(s)	499, 1390, 2072, 2435, 2438
Tsp45I	GTSAC	3 cut(s)	183, 772, 1167
TspDTI	ATGAA	9 cut(s)	471, 588, 816, 1017, 1164, 1425, 1839, 1844, 2253
TspRI	CASTG	7 cut(s)	63, 192, 1368, 1753, 1802, 2110, 2238
VpaK11BI	GGWCC	3 cut(s)	631, 657, 1892
XbaI	TCTAGA	1 cut(s)	2015
XceI	RCATGY	2 cut(s)	1660, 1775
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1632
XhoI	CTCGAG	1 cut(s)	1734
XmiI	GTMKAC	1 cut(s)	53
XmnI	GAANNNNTTC	2 cut(s)	322, 848
XspI	CTAG	1 cut(s)	2016
Zsp2I	ATGCAT	2 cut(s)	142, 1074

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.