Mitogen-activated protein kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0028811 |
| rosa_laevigata | RLG00000018790 RLG00000034794 |
| rosa_roxburghii | Rroxscaffold_1G00051090 Rroxscaffold_2G00120030 |
| rosa_samantha | Rh1AG072100 Rh1CG071500 Rh2AG308900 Rh2AG434900 Rh2CG420900 Rh5BG200900 |
| rosa_wichuraiana | Rw2G024900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 139 |
| Acc36I | ACCTGC | 1 cut(s) | 19 |
| AccII | CGCG | 1 cut(s) | 326 |
| AciI | CCGC | 3 cut(s) | 69, 324, 326 |
| AclWI | GGATC | 3 cut(s) | 45, 422, 442 |
| AcoI | YGGCCR | 1 cut(s) | 321 |
| AcsI | RAATTY | 1 cut(s) | 272 |
| AgsI | TTSAA | 1 cut(s) | 26 |
| Alw26I | GTCTC | 2 cut(s) | 125, 356 |
| AlwI | GGATC | 3 cut(s) | 45, 422, 442 |
| Ama87I | CYCGRG | 1 cut(s) | 359 |
| AoxI | GGCC | 2 cut(s) | 167, 321 |
| ApeKI | GCWGC | 1 cut(s) | 222 |
| ApoI | RAATTY | 1 cut(s) | 272 |
| AseI | ATTAAT | 1 cut(s) | 53 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 511 |
| AspS9I | GGNCC | 1 cut(s) | 167 |
| AvaI | CYCGRG | 1 cut(s) | 359 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 187, 220 |
| BbvI | GCAGC | 1 cut(s) | 209 |
| BccI | CCATC | 2 cut(s) | 212, 232 |
| BciVI | GTATCC | 1 cut(s) | 215 |
| BcoDI | GTCTC | 2 cut(s) | 125, 356 |
| BfuAI | ACCTGC | 1 cut(s) | 19 |
| BfuI | GTATCC | 1 cut(s) | 215 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 320 |
| BisI | GCNGC | 2 cut(s) | 223, 324 |
| BlsI | GCNGC | 2 cut(s) | 224, 325 |
| BmeT110I | CYCGRG | 1 cut(s) | 359 |
| BmgT120I | GGNCC | 1 cut(s) | 167 |
| BmsI | GCATC | 1 cut(s) | 409 |
| Bsa29I | ATCGAT | 1 cut(s) | 417 |
| BsaBI | GATNNNNATC | 4 cut(s) | 189, 242, 246, 446 |
| BsaJI | CCNNGG | 1 cut(s) | 324 |
| Bse1I | ACTGG | 1 cut(s) | 149 |
| Bse8I | GATNNNNATC | 4 cut(s) | 189, 242, 246, 446 |
| BseCI | ATCGAT | 1 cut(s) | 417 |
| BseDI | CCNNGG | 1 cut(s) | 324 |
| BseJI | GATNNNNATC | 4 cut(s) | 189, 242, 246, 446 |
| BseNI | ACTGG | 1 cut(s) | 149 |
| BseXI | GCAGC | 1 cut(s) | 209 |
| Bsh1236I | CGCG | 1 cut(s) | 326 |
| BshFI | GGCC | 2 cut(s) | 169, 323 |
| BshVI | ATCGAT | 1 cut(s) | 417 |
| BsiHKCI | CYCGRG | 1 cut(s) | 359 |
| BslFI | GGGAC | 2 cut(s) | 105, 287 |
| BsmAI | GTCTC | 2 cut(s) | 125, 356 |
| BsmBI | CGTCTC | 1 cut(s) | 125 |
| BsmFI | GGGAC | 2 cut(s) | 105, 287 |
| BsmI | GAATGC | 1 cut(s) | 403 |
| BsnI | GGCC | 2 cut(s) | 169, 323 |
| BsoBI | CYCGRG | 1 cut(s) | 359 |
| Bsp143I | GATC | 3 cut(s) | 37, 414, 447 |
| BspACI | CCGC | 3 cut(s) | 69, 324, 326 |
| BspANI | GGCC | 2 cut(s) | 169, 323 |
| BspDI | ATCGAT | 1 cut(s) | 417 |
| BspFNI | CGCG | 1 cut(s) | 326 |
| BspHI | TCATGA | 1 cut(s) | 466 |
| BspMI | ACCTGC | 1 cut(s) | 19 |
| BspPI | GGATC | 3 cut(s) | 45, 422, 442 |
| BsrI | ACTGG | 1 cut(s) | 149 |
| BssECI | CCNNGG | 1 cut(s) | 324 |
| BssMI | GATC | 3 cut(s) | 37, 414, 447 |
| Bst4CI | ACNGT | 2 cut(s) | 33, 529 |
| Bst6I | CTCTTC | 3 cut(s) | 27, 257, 366 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 344 |
| BstDSI | CCRYGG | 1 cut(s) | 324 |
| BstFNI | CGCG | 1 cut(s) | 326 |
| BstKTI | GATC | 3 cut(s) | 40, 417, 450 |
| BstMAI | GTCTC | 2 cut(s) | 125, 356 |
| BstMBI | GATC | 3 cut(s) | 37, 414, 447 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 320, 344 |
| BstUI | CGCG | 1 cut(s) | 326 |
| BstV1I | GCAGC | 1 cut(s) | 209 |
| BstX2I | RGATCY | 1 cut(s) | 447 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 57 |
| BstYI | RGATCY | 1 cut(s) | 447 |
| Bsu15I | ATCGAT | 1 cut(s) | 417 |
| BsuI | GTATCC | 1 cut(s) | 215 |
| BsuRI | GGCC | 2 cut(s) | 169, 323 |
| BsuTUI | ATCGAT | 1 cut(s) | 417 |
| BtgI | CCRYGG | 1 cut(s) | 324 |
| BveI | ACCTGC | 1 cut(s) | 19 |
| CciI | TCATGA | 1 cut(s) | 466 |
| Cfr13I | GGNCC | 1 cut(s) | 167 |
| Cfr42I | CCGCGG | 1 cut(s) | 327 |
| ClaI | ATCGAT | 1 cut(s) | 417 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 14, 49 |
| CviAII | CATG | 1 cut(s) | 467 |
| CviJI | RGCY | 6 cut(s) | 169, 222, 255, 268, 323, 464 |
| CviKI_1 | RGCY | 6 cut(s) | 169, 222, 255, 268, 323, 464 |
| DpnI | GATC | 3 cut(s) | 39, 416, 449 |
| DpnII | GATC | 3 cut(s) | 37, 414, 447 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 139 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 139 |
| EaeI | YGGCCR | 1 cut(s) | 321 |
| Eam1104I | CTCTTC | 3 cut(s) | 27, 257, 366 |
| EarI | CTCTTC | 3 cut(s) | 27, 257, 366 |
| EciI | GGCGGA | 1 cut(s) | 84 |
| Eco32I | GATATC | 1 cut(s) | 244 |
| Eco88I | CYCGRG | 1 cut(s) | 359 |
| EcoRV | GATATC | 1 cut(s) | 244 |
| EcoT22I | ATGCAT | 1 cut(s) | 403 |
| Esp3I | CGTCTC | 1 cut(s) | 125 |
| FaeI | CATG | 1 cut(s) | 470 |
| FaiI | YATR | 6 cut(s) | 177, 300, 335, 459, 461, 468 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 499, 531 |
| FaqI | GGGAC | 2 cut(s) | 105, 287 |
| FatI | CATG | 1 cut(s) | 466 |
| FauNDI | CATATG | 1 cut(s) | 459 |
| Fnu4HI | GCNGC | 2 cut(s) | 223, 324 |
| Fsp4HI | GCNGC | 2 cut(s) | 223, 324 |
| GluI | GCNGC | 2 cut(s) | 223, 324 |
| HaeIII | GGCC | 2 cut(s) | 169, 323 |
| Hin1II | CATG | 1 cut(s) | 470 |
| HincII | GTYRAC | 1 cut(s) | 8 |
| HindII | GTYRAC | 1 cut(s) | 8 |
| HinfI | GANTC | 4 cut(s) | 118, 285, 357, 430 |
| Hpy166II | GTNNAC | 1 cut(s) | 8 |
| Hpy188I | TCNGA | 4 cut(s) | 209, 437, 479, 506 |
| Hpy188III | TCNNGA | 6 cut(s) | 85, 122, 259, 361, 385, 467 |
| Hpy8I | GTNNAC | 1 cut(s) | 8 |
| HpyCH4III | ACNGT | 2 cut(s) | 33, 529 |
| HpyCH4V | TGCA | 3 cut(s) | 352, 380, 401 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 320, 344 |
| Hsp92II | CATG | 1 cut(s) | 470 |
| KspI | CCGCGG | 1 cut(s) | 327 |
| Kzo9I | GATC | 3 cut(s) | 37, 414, 447 |
| LpnPI | CCDG | 3 cut(s) | 24, 162, 329 |
| Lsp1109I | GCAGC | 1 cut(s) | 209 |
| LweI | GCATC | 1 cut(s) | 409 |
| MalI | GATC | 3 cut(s) | 39, 416, 449 |
| MboI | GATC | 3 cut(s) | 37, 414, 447 |
| MboII | GAAGA | 6 cut(s) | 14, 247, 274, 383, 400, 507 |
| MflI | RGATCY | 1 cut(s) | 447 |
| MluCI | AATT | 5 cut(s) | 54, 72, 112, 272, 472 |
| MlyI | GAGTC | 4 cut(s) | 127, 294, 351, 424 |
| MnlI | CCTC | 8 cut(s) | 28, 175, 180, 245, 258, 315, 367, 420 |
| Mph1103I | ATGCAT | 1 cut(s) | 403 |
| MroXI | GAANNNNTTC | 1 cut(s) | 511 |
| MseI | TTAA | 1 cut(s) | 53 |
| MspA1I | CMGCKG | 1 cut(s) | 326 |
| Mva1269I | GAATGC | 1 cut(s) | 403 |
| MvnI | CGCG | 1 cut(s) | 326 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 320, 344 |
| NdeI | CATATG | 1 cut(s) | 459 |
| NdeII | GATC | 3 cut(s) | 37, 414, 447 |
| NlaIII | CATG | 1 cut(s) | 470 |
| NsiI | ATGCAT | 1 cut(s) | 403 |
| PaeR7I | CTCGAG | 1 cut(s) | 359 |
| PagI | TCATGA | 1 cut(s) | 466 |
| PctI | GAATGC | 1 cut(s) | 403 |
| PdmI | GAANNNNTTC | 1 cut(s) | 511 |
| PkrI | GCNGC | 2 cut(s) | 224, 325 |
| PleI | GAGTC | 4 cut(s) | 126, 293, 351, 424 |
| PpsI | GAGTC | 4 cut(s) | 126, 293, 351, 424 |
| PshBI | ATTAAT | 1 cut(s) | 53 |
| PspPI | GGNCC | 1 cut(s) | 167 |
| PsuI | RGATCY | 1 cut(s) | 447 |
| SacII | CCGCGG | 1 cut(s) | 327 |
| SaqAI | TTAA | 1 cut(s) | 53 |
| SatI | GCNGC | 2 cut(s) | 223, 324 |
| Sau3AI | GATC | 3 cut(s) | 37, 414, 447 |
| Sau96I | GGNCC | 1 cut(s) | 167 |
| SchI | GAGTC | 4 cut(s) | 127, 294, 351, 424 |
| SetI | ASST | 3 cut(s) | 13, 201, 378 |
| SfaNI | GCATC | 1 cut(s) | 409 |
| Sfr274I | CTCGAG | 1 cut(s) | 359 |
| Sfr303I | CCGCGG | 1 cut(s) | 327 |
| SgrBI | CCGCGG | 1 cut(s) | 327 |
| SlaI | CTCGAG | 1 cut(s) | 359 |
| SmlI | CTYRAG | 1 cut(s) | 359 |
| SmoI | CTYRAG | 1 cut(s) | 359 |
| Sse9I | AATT | 5 cut(s) | 54, 72, 112, 272, 472 |
| SsiI | CCGC | 3 cut(s) | 69, 324, 326 |
| TaaI | ACNGT | 2 cut(s) | 33, 529 |
| TaqI | TCGA | 5 cut(s) | 156, 250, 260, 360, 417 |
| TasI | AATT | 5 cut(s) | 54, 72, 112, 272, 472 |
| TauI | GCSGC | 1 cut(s) | 326 |
| Tru1I | TTAA | 1 cut(s) | 53 |
| Tru9I | TTAA | 1 cut(s) | 53 |
| TseI | GCWGC | 1 cut(s) | 222 |
| VspI | ATTAAT | 1 cut(s) | 53 |
| XapI | RAATTY | 1 cut(s) | 272 |
| XhoI | CTCGAG | 1 cut(s) | 359 |
| XmnI | GAANNNNTTC | 1 cut(s) | 511 |
| Zsp2I | ATGCAT | 1 cut(s) | 403 |