Ubiquitin-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g20951 |
| rosa_chinensis | RchiOBHm_Chr2g0161521 RchiOBHm_Chr3g0478151 |
| rosa_multiflora | Rmu_sc0007744.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00053410 |
| rosa_samantha | Rh3AG215300 Rh3BG248900 Rh5AG180600 Rh5BG179200 |
| rosa_wichuraiana | Rw2G046050 Rw3G019570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 99 |
| AclWI | GGATC | 2 cut(s) | 82, 233 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 27, 222, 229 |
| AgsI | TTSAA | 3 cut(s) | 47, 191, 203 |
| AjnI | CCWGG | 1 cut(s) | 90 |
| AlwI | GGATC | 2 cut(s) | 82, 233 |
| ApeKI | GCWGC | 2 cut(s) | 57, 268 |
| AsuC2I | CCSGG | 2 cut(s) | 28, 178 |
| AsuHPI | GGTGA | 2 cut(s) | 31, 175 |
| BbsI | GAAGAC | 2 cut(s) | 38, 173 |
| BbvI | GCAGC | 2 cut(s) | 69, 280 |
| BccI | CCATC | 2 cut(s) | 44, 74 |
| BciT130I | CCWGG | 1 cut(s) | 92 |
| BcnI | CCSGG | 2 cut(s) | 28, 178 |
| BisI | GCNGC | 2 cut(s) | 58, 269 |
| BlsI | GCNGC | 2 cut(s) | 59, 270 |
| Bme1390I | CCNGG | 3 cut(s) | 28, 92, 178 |
| BmrFI | CCNGG | 3 cut(s) | 28, 92, 178 |
| BpiI | GAAGAC | 2 cut(s) | 38, 173 |
| BpmI | CTGGAG | 1 cut(s) | 246 |
| BpuMI | CCSGG | 2 cut(s) | 28, 178 |
| BsaWI | WCCGGW | 1 cut(s) | 222 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 27, 222, 229 |
| Bse1I | ACTGG | 1 cut(s) | 263 |
| BseBI | CCWGG | 1 cut(s) | 92 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 27, 222, 229 |
| BseNI | ACTGG | 1 cut(s) | 263 |
| BseRI | GAGGAG | 1 cut(s) | 257 |
| BseXI | GCAGC | 2 cut(s) | 69, 280 |
| BsgI | GTGCAG | 1 cut(s) | 287 |
| BsiSI | CCGG | 3 cut(s) | 27, 177, 223 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 27, 222, 229 |
| BsmI | GAATGC | 1 cut(s) | 255 |
| Bsp143I | GATC | 2 cut(s) | 87, 225 |
| BspPI | GGATC | 2 cut(s) | 82, 233 |
| BsrI | ACTGG | 1 cut(s) | 263 |
| BssMI | GATC | 2 cut(s) | 87, 225 |
| Bst2UI | CCWGG | 1 cut(s) | 92 |
| BstKTI | GATC | 2 cut(s) | 90, 228 |
| BstMBI | GATC | 2 cut(s) | 87, 225 |
| BstNI | CCWGG | 1 cut(s) | 92 |
| BstSCI | CCNGG | 3 cut(s) | 26, 90, 176 |
| BstV1I | GCAGC | 2 cut(s) | 69, 280 |
| BstV2I | GAAGAC | 2 cut(s) | 38, 173 |
| BstX2I | RGATCY | 1 cut(s) | 87 |
| BstYI | RGATCY | 1 cut(s) | 87 |
| BtsIMutI | CAGTG | 1 cut(s) | 270 |
| CviJI | RGCY | 1 cut(s) | 83 |
| CviKI_1 | RGCY | 1 cut(s) | 83 |
| DpnI | GATC | 2 cut(s) | 89, 227 |
| DpnII | GATC | 2 cut(s) | 87, 225 |
| EcoRII | CCWGG | 1 cut(s) | 90 |
| FaiI | YATR | 7 cut(s) | 99, 155, 279, 281, 283, 285, 293 |
| Fnu4HI | GCNGC | 2 cut(s) | 58, 269 |
| Fsp4HI | GCNGC | 2 cut(s) | 58, 269 |
| GluI | GCNGC | 2 cut(s) | 58, 269 |
| GsuI | CTGGAG | 1 cut(s) | 246 |
| HapII | CCGG | 3 cut(s) | 27, 177, 223 |
| HincII | GTYRAC | 1 cut(s) | 117 |
| HindII | GTYRAC | 1 cut(s) | 117 |
| HinfI | GANTC | 2 cut(s) | 113, 169 |
| HpaII | CCGG | 3 cut(s) | 27, 177, 223 |
| HphI | GGTGA | 2 cut(s) | 31, 175 |
| Hpy166II | GTNNAC | 1 cut(s) | 117 |
| Hpy188III | TCNNGA | 1 cut(s) | 13 |
| Hpy8I | GTNNAC | 1 cut(s) | 117 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 268 |
| Kzo9I | GATC | 2 cut(s) | 87, 225 |
| LpnPI | CCDG | 6 cut(s) | 40, 77, 104, 190, 236, 276 |
| Lsp1109I | GCAGC | 2 cut(s) | 69, 280 |
| MalI | GATC | 2 cut(s) | 89, 227 |
| MboI | GATC | 2 cut(s) | 87, 225 |
| MboII | GAAGA | 2 cut(s) | 43, 178 |
| MflI | RGATCY | 1 cut(s) | 87 |
| MluCI | AATT | 2 cut(s) | 186, 192 |
| MlyI | GAGTC | 2 cut(s) | 122, 163 |
| MnlI | CCTC | 6 cut(s) | 129, 135, 140, 235, 244, 270 |
| MseI | TTAA | 1 cut(s) | 159 |
| MspI | CCGG | 3 cut(s) | 27, 177, 223 |
| MspR9I | CCNGG | 3 cut(s) | 28, 92, 178 |
| Mva1269I | GAATGC | 1 cut(s) | 255 |
| MvaI | CCWGG | 1 cut(s) | 92 |
| NciI | CCSGG | 2 cut(s) | 28, 178 |
| NdeII | GATC | 2 cut(s) | 87, 225 |
| PctI | GAATGC | 1 cut(s) | 255 |
| PflFI | GACNNNGTC | 1 cut(s) | 74 |
| PfoI | TCCNGGA | 1 cut(s) | 90 |
| PkrI | GCNGC | 2 cut(s) | 59, 270 |
| PleI | GAGTC | 2 cut(s) | 121, 163 |
| PpsI | GAGTC | 2 cut(s) | 121, 163 |
| PsiI | TTATAA | 1 cut(s) | 99 |
| Psp6I | CCWGG | 1 cut(s) | 90 |
| PspGI | CCWGG | 1 cut(s) | 90 |
| PsuI | RGATCY | 1 cut(s) | 87 |
| PsyI | GACNNNGTC | 1 cut(s) | 74 |
| SaqAI | TTAA | 1 cut(s) | 159 |
| SatI | GCNGC | 2 cut(s) | 58, 269 |
| Sau3AI | GATC | 2 cut(s) | 87, 225 |
| SchI | GAGTC | 2 cut(s) | 122, 163 |
| ScrFI | CCNGG | 3 cut(s) | 28, 92, 178 |
| SetI | ASST | 4 cut(s) | 129, 140, 165, 278 |
| Sse9I | AATT | 2 cut(s) | 186, 192 |
| StyD4I | CCNGG | 3 cut(s) | 26, 90, 176 |
| TaqI | TCGA | 1 cut(s) | 69 |
| TasI | AATT | 2 cut(s) | 186, 192 |
| Tru1I | TTAA | 1 cut(s) | 159 |
| Tru9I | TTAA | 1 cut(s) | 159 |
| TscAI | CASTG | 1 cut(s) | 270 |
| TseI | GCWGC | 2 cut(s) | 57, 268 |
| TspRI | CASTG | 1 cut(s) | 270 |
| Tth111I | GACNNNGTC | 1 cut(s) | 74 |