Ubiquitin-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g20951 |
| rosa_chinensis | RchiOBHm_Chr2g0161521 RchiOBHm_Chr3g0478151 |
| rosa_multiflora | Rmu_sc0007744.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00053410 |
| rosa_samantha | Rh3AG215300 Rh3BG248900 Rh5AG180600 Rh5BG179200 |
| rosa_wichuraiana | Rw2G046050 Rw3G019570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 177 |
| AclWI | GGATC | 2 cut(s) | 82, 311 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 27, 97, 300, 307 |
| AgsI | TTSAA | 3 cut(s) | 47, 269, 281 |
| AjnI | CCWGG | 1 cut(s) | 90 |
| Alw26I | GTCTC | 1 cut(s) | 118 |
| AlwI | GGATC | 2 cut(s) | 82, 311 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 127 |
| ApeKI | GCWGC | 2 cut(s) | 57, 346 |
| AsuC2I | CCSGG | 1 cut(s) | 256 |
| AsuHPI | GGTGA | 2 cut(s) | 31, 253 |
| BbsI | GAAGAC | 2 cut(s) | 38, 251 |
| BbvI | GCAGC | 2 cut(s) | 69, 358 |
| BccI | CCATC | 3 cut(s) | 44, 74, 149 |
| BciT130I | CCWGG | 1 cut(s) | 92 |
| BclI | TGATCA | 1 cut(s) | 115 |
| BcnI | CCSGG | 1 cut(s) | 256 |
| BcoDI | GTCTC | 1 cut(s) | 118 |
| BisI | GCNGC | 2 cut(s) | 58, 347 |
| BlsI | GCNGC | 2 cut(s) | 59, 348 |
| Bme1390I | CCNGG | 2 cut(s) | 92, 256 |
| BmrFI | CCNGG | 2 cut(s) | 92, 256 |
| BmsI | GCATC | 1 cut(s) | 114 |
| BpiI | GAAGAC | 2 cut(s) | 38, 251 |
| BpmI | CTGGAG | 1 cut(s) | 324 |
| BpuMI | CCSGG | 1 cut(s) | 256 |
| BsaWI | WCCGGW | 1 cut(s) | 300 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 27, 97, 300, 307 |
| Bse1I | ACTGG | 1 cut(s) | 341 |
| BseBI | CCWGG | 1 cut(s) | 92 |
| BseGI | GGATG | 1 cut(s) | 105 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 27, 97, 300, 307 |
| BseNI | ACTGG | 1 cut(s) | 341 |
| BseRI | GAGGAG | 1 cut(s) | 335 |
| BseXI | GCAGC | 2 cut(s) | 69, 358 |
| BsgI | GTGCAG | 1 cut(s) | 365 |
| BsiSI | CCGG | 2 cut(s) | 255, 301 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 27, 97, 300, 307 |
| BsmAI | GTCTC | 1 cut(s) | 118 |
| BsmI | GAATGC | 1 cut(s) | 333 |
| Bsp143I | GATC | 3 cut(s) | 87, 115, 303 |
| BspPI | GGATC | 2 cut(s) | 82, 311 |
| BsrI | ACTGG | 1 cut(s) | 341 |
| BssMI | GATC | 3 cut(s) | 87, 115, 303 |
| Bst2UI | CCWGG | 1 cut(s) | 92 |
| BstF5I | GGATG | 1 cut(s) | 105 |
| BstKTI | GATC | 3 cut(s) | 90, 118, 306 |
| BstMAI | GTCTC | 1 cut(s) | 118 |
| BstMBI | GATC | 3 cut(s) | 87, 115, 303 |
| BstNI | CCWGG | 1 cut(s) | 92 |
| BstSCI | CCNGG | 2 cut(s) | 90, 254 |
| BstV1I | GCAGC | 2 cut(s) | 69, 358 |
| BstV2I | GAAGAC | 2 cut(s) | 38, 251 |
| BstX2I | RGATCY | 1 cut(s) | 87 |
| BstYI | RGATCY | 1 cut(s) | 87 |
| BtsCI | GGATG | 1 cut(s) | 105 |
| BtsIMutI | CAGTG | 1 cut(s) | 348 |
| CaiI | CAGNNNCTG | 1 cut(s) | 127 |
| CviJI | RGCY | 1 cut(s) | 83 |
| CviKI_1 | RGCY | 1 cut(s) | 83 |
| DpnI | GATC | 3 cut(s) | 89, 117, 305 |
| DpnII | GATC | 3 cut(s) | 87, 115, 303 |
| EcoRII | CCWGG | 1 cut(s) | 90 |
| FaiI | YATR | 6 cut(s) | 177, 233, 357, 359, 361, 371 |
| FbaI | TGATCA | 1 cut(s) | 115 |
| Fnu4HI | GCNGC | 2 cut(s) | 58, 347 |
| FokI | GGATG | 1 cut(s) | 92 |
| Fsp4HI | GCNGC | 2 cut(s) | 58, 347 |
| GluI | GCNGC | 2 cut(s) | 58, 347 |
| GsuI | CTGGAG | 1 cut(s) | 324 |
| HapII | CCGG | 2 cut(s) | 255, 301 |
| HincII | GTYRAC | 1 cut(s) | 195 |
| HindII | GTYRAC | 1 cut(s) | 195 |
| HinfI | GANTC | 2 cut(s) | 191, 247 |
| HpaII | CCGG | 2 cut(s) | 255, 301 |
| HphI | GGTGA | 2 cut(s) | 31, 253 |
| Hpy166II | GTNNAC | 1 cut(s) | 195 |
| Hpy188III | TCNNGA | 2 cut(s) | 13, 113 |
| Hpy8I | GTNNAC | 1 cut(s) | 195 |
| HpyAV | CCTTC | 1 cut(s) | 95 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 170, 346 |
| Ksp22I | TGATCA | 1 cut(s) | 115 |
| Kzo9I | GATC | 3 cut(s) | 87, 115, 303 |
| LpnPI | CCDG | 7 cut(s) | 77, 104, 123, 126, 268, 314, 354 |
| Lsp1109I | GCAGC | 2 cut(s) | 69, 358 |
| LweI | GCATC | 1 cut(s) | 114 |
| MalI | GATC | 3 cut(s) | 89, 117, 305 |
| MboI | GATC | 3 cut(s) | 87, 115, 303 |
| MboII | GAAGA | 3 cut(s) | 43, 164, 256 |
| MfeI | CAATTG | 1 cut(s) | 146 |
| MflI | RGATCY | 1 cut(s) | 87 |
| MluCI | AATT | 3 cut(s) | 146, 264, 270 |
| MlyI | GAGTC | 2 cut(s) | 200, 241 |
| MnlI | CCTC | 7 cut(s) | 120, 207, 213, 218, 313, 322, 348 |
| MseI | TTAA | 1 cut(s) | 237 |
| MspI | CCGG | 2 cut(s) | 255, 301 |
| MspR9I | CCNGG | 2 cut(s) | 92, 256 |
| MunI | CAATTG | 1 cut(s) | 146 |
| Mva1269I | GAATGC | 1 cut(s) | 333 |
| MvaI | CCWGG | 1 cut(s) | 92 |
| NciI | CCSGG | 1 cut(s) | 256 |
| NdeII | GATC | 3 cut(s) | 87, 115, 303 |
| PctI | GAATGC | 1 cut(s) | 333 |
| PflFI | GACNNNGTC | 1 cut(s) | 74 |
| PfoI | TCCNGGA | 1 cut(s) | 90 |
| PkrI | GCNGC | 2 cut(s) | 59, 348 |
| PleI | GAGTC | 2 cut(s) | 199, 241 |
| PpsI | GAGTC | 2 cut(s) | 199, 241 |
| PsiI | TTATAA | 1 cut(s) | 177 |
| Psp6I | CCWGG | 1 cut(s) | 90 |
| PspGI | CCWGG | 1 cut(s) | 90 |
| PstNI | CAGNNNCTG | 1 cut(s) | 127 |
| PsuI | RGATCY | 1 cut(s) | 87 |
| PsyI | GACNNNGTC | 1 cut(s) | 74 |
| SaqAI | TTAA | 1 cut(s) | 237 |
| SatI | GCNGC | 2 cut(s) | 58, 347 |
| Sau3AI | GATC | 3 cut(s) | 87, 115, 303 |
| SchI | GAGTC | 2 cut(s) | 200, 241 |
| ScrFI | CCNGG | 2 cut(s) | 92, 256 |
| SetI | ASST | 4 cut(s) | 207, 218, 243, 356 |
| SfaNI | GCATC | 1 cut(s) | 114 |
| Sse9I | AATT | 3 cut(s) | 146, 264, 270 |
| StyD4I | CCNGG | 2 cut(s) | 90, 254 |
| TaqI | TCGA | 2 cut(s) | 69, 160 |
| TasI | AATT | 3 cut(s) | 146, 264, 270 |
| Tru1I | TTAA | 1 cut(s) | 237 |
| Tru9I | TTAA | 1 cut(s) | 237 |
| TscAI | CASTG | 1 cut(s) | 348 |
| TseI | GCWGC | 2 cut(s) | 57, 346 |
| TspRI | CASTG | 1 cut(s) | 348 |
| Tth111I | GACNNNGTC | 1 cut(s) | 74 |