Rroxscaffold_1G00060500

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0011118
Physical Location & Seq
Reverse (-)
82713954 .. 82717461
3508 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00060500.1

Sequence Viewer

Length: 1893 bp
ATGGAGAACTTCGGGCTGTTTTCTCTGGTGATAGTCTTTGTGTTTTCAAAGACTTGTGAAGCTCAATCAAGGTCTTTTTTGATAAACTGTGGTACAAATTCCAGTGTCACTGTGAGTGGTAGGAAATGGGTCGGTGATTCATCCCCTAACAATAACATCACTCTCAGTTCCAGTGGAATTCCTGCCTCCACTGATGTCAAAAGTGTTGATGATTCGACATATGGAGAGCTCTATAAAACAGCTCGATTGTTCGATAGTAGCTTGAACTACACATTCCAAGGTGTTAGGGGAGACTATTTTGTTAGGCTCCATTTCAGTCCTTTCTCCTTTGATGACTACAATGTAAATGTGTCTTCGTTTGGAGTTGTGGCAAATGGTCTGAAACTGGTTGAGAAATTCGAGGTTCCAGGTGAGCTATTACACAAGAATGCATACCTGCAGGGTTCAGGAAGCAATTCAACTTCTTCAATAGTCAAGGAGTACGTTTTGGCAATCAATAGGGATGCACTAGTCATTGAGTTCATCCCGGACAAGGAGACATTCGGGTTTATTAATGCAATCGAGATTGTTCCAGCTGTAGATGAGCTCTTTGCAGGATCAGCTAGTAAAGTGGGTGGAAATGGTGCAAATGTGAATGTAAGTTGGCAGGGGATCGAAACTATGTACAGGTTGAATGTTGGTGGTTCTGAAGTTAGTCCCAGTCAGGATTCAGATCTTTGGAGAAAATGGGAGATGGATACTAGCTACATGATCACAGCAAATGCCGGGGTAGAAATCAAAAACAGTTCCAATATTACCTATTCGTCTGTGAATGATTCCTCACTGGCTCCTCTTGTTGTCTATGAGAGTGCAAGAACTATGTCCAACAATGAAGTCTTGGAGAAAAGGTTCAACATGTCATGGAAGTTTGAAGTGGATCCTGATTTTGATTATTTGATCCGACTACATTTCTGTGAGCTAGTTTTTGACAAGGCAAACCAGAGGATATTTAGAGTTTACATAAACAACAGGACTGCAGCAGATAATTACAATGTGTTTGTCCGAGCAGGAGGGATGAACAAAGCATATCATCAGGATTTCTTTGATGTGGTGTCTTCAAAAGTCAAGACACTTTGGATTCAGTTGGGTCCTGACACAAATGTTGGGGCTGCAGGAACTGATGCGCTATTGAATGGCTTGGAGATTTTCAAGATCAGCCGAAATGGGAATCTTGCTTATGTGGACAACTATGAGTCGAGTGCCAATTCATCTAAAACAAGTTCGAAAAATGCAATTCTTTGGGGGACAATTGGAGCAGGTGTAGCTTCTGTTGCCATTCTAGCCACTCTAATTTTTTGTTTCTGCAAATGCCGAAGAGAAAAATCAAGTGACACCAAAACCAATCCCCCTGGATGGAGGCCATTGTTCCTTGTAAACAGCACTGTCAATGCCAAGGGATCAGCAGGAAGCAAGAATCAGTATGGTTCTGTGGCCTCTACTAGAGCTGGCAAGCGGTTCTTGTTACCTGAGATTCGTGCAGCAACTAATAATTTTGATGAAAGTTTAGTGATTGGAGTTGGAGGCTTTGGAAAGGTCTACAAGGGTGAGATTGAGGATGGCACTCTTGTAGCAATCAAGCGGTCCAACCCCCAATCCCAGCAAGGCCTGGCTGAATTCGAGACGGAGATTGAGATGCTTTCAAAGCTCAGGCATAGGCATTTAGTGTCCTTGATTGGATTCTGTGATGAGCAAAATGAGATGATCTTGGTTTATGAGTATATGGCAAATGGGACTCTCAGAGGTCATCTCTACGGAAGTGAACTCCCACCGTTGACGTGGAAGCAACGAGTAGAAGCATGCATTGGTGCTGCTCGAGGACTACATTACCTTCATACCGGAGCAGATAGGGGGTAA

Protein Analysis

630

Amino Acids

69.34

Weight (kDa)

6.08

Isoelectric Point (pI)

36.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 26 - 187 3.1e-10 Malectin domain
Malectin_like PF12819 28 - 398 5.8e-28 Malectin-like domain
Malectin PF11721 221 - 376 8.9e-15 Malectin domain
PK_Tyr_Ser-Thr PF07714 516 - 625 1.5e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 516 - 625 5e-16 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1286
Acc36I ACCTGC 2 cut(s) 444, 1286
AccI GTMKAC 1 cut(s) 1575
AciI CCGC 2 cut(s) 1492, 1618
AclWI GGATC 6 cut(s) 604, 659, 911, 924, 931, 1444
AcsI RAATTY 4 cut(s) 97, 177, 395, 1652
AcuI CTGAAG 1 cut(s) 708
AfaI GTAC 3 cut(s) 94, 482, 665
AfiI CCNNNNNNNGG 2 cut(s) 532, 1392
AflIII ACRYGT 1 cut(s) 894
AhlI ACTAGT 1 cut(s) 508
AjiI CACGTC 1 cut(s) 1815
AjnI CCWGG 3 cut(s) 406, 1387, 1644
AjuI GAANNNNNNNTTGG 2 cut(s) 1824, 1856
AloI GAACNNNNNNTCC 2 cut(s) 872, 904
Alw21I GWGCWC 2 cut(s) 231, 588
Alw26I GTCTC 3 cut(s) 285, 530, 1652
AlwI GGATC 6 cut(s) 604, 659, 911, 924, 931, 1444
AlwNI CAGNNNCTG 1 cut(s) 1157
Ama87I CYCGRG 1 cut(s) 1851
AoxI GGCC 3 cut(s) 1397, 1470, 1642
ApeKI GCWGC 4 cut(s) 1016, 1148, 1517, 1847
ApoI RAATTY 4 cut(s) 97, 177, 395, 1652
AseI ATTAAT 1 cut(s) 552
Asp700I GAANNNNTTC 2 cut(s) 454, 887
AspLEI GCGC 1 cut(s) 1165
AspS9I GGNCC 2 cut(s) 1127, 1620
AsuC2I CCSGG 2 cut(s) 527, 766
AsuHPI GGTGA 4 cut(s) 40, 146, 422, 1595
AsuII TTCGAA 1 cut(s) 1262
AvaI CYCGRG 1 cut(s) 1851
AvaII GGWCC 2 cut(s) 1127, 1620
BamHI GGATCC 1 cut(s) 916
BanII GRGCYC 2 cut(s) 231, 588
BbsI GAAGAC 2 cut(s) 345, 1086
Bbv12I GWGCWC 2 cut(s) 231, 588
BbvI GCAGC 4 cut(s) 1028, 1135, 1529, 1834
BccI CCATC 3 cut(s) 727, 1386, 1589
BciT130I CCWGG 3 cut(s) 408, 1389, 1646
BciVI GTATCC 1 cut(s) 730
BclI TGATCA 1 cut(s) 750
BcnI CCSGG 2 cut(s) 527, 766
BcoDI GTCTC 3 cut(s) 285, 530, 1652
BcuI ACTAGT 1 cut(s) 508
BfaI CTAG 6 cut(s) 509, 603, 741, 959, 1319, 1479
BfmI CTRYAG 4 cut(s) 437, 576, 1014, 1149
BfuAI ACCTGC 2 cut(s) 444, 1286
BfuI GTATCC 1 cut(s) 730
BglII AGATCT 1 cut(s) 712
BisI GCNGC 4 cut(s) 1017, 1149, 1518, 1848
BlsI GCNGC 4 cut(s) 1018, 1150, 1519, 1849
Bme1390I CCNGG 5 cut(s) 408, 527, 766, 1389, 1646
Bme18I GGWCC 2 cut(s) 1127, 1620
BmeT110I CYCGRG 1 cut(s) 1851
BmgBI CACGTC 1 cut(s) 1815
BmgT120I GGNCC 2 cut(s) 1127, 1620
BmiI GGNNCC 5 cut(s) 308, 405, 828, 918, 1128
BmrFI CCNGG 5 cut(s) 408, 527, 766, 1389, 1646
BmrI ACTGGG 1 cut(s) 693
BmsI GCATC 3 cut(s) 493, 1150, 1662
BmuI ACTGGG 1 cut(s) 693
BpiI GAAGAC 2 cut(s) 345, 1086
BplI GAGNNNNNCTC 2 cut(s) 1770, 1802
Bpu10I CCTNAGC 1 cut(s) 1685
Bpu14I TTCGAA 1 cut(s) 1262
BpuMI CCSGG 2 cut(s) 527, 766
BsaBI GATNNNNATC 1 cut(s) 711
BsaJI CCNNGG 4 cut(s) 277, 765, 1387, 1431
BsaWI WCCGGW 1 cut(s) 1874
BsaXI ACNNNNNCTCC 4 cut(s) 872, 902, 1284, 1314
Bsc4I CCNNNNNNNGG 2 cut(s) 532, 1392
Bse1I ACTGG 5 cut(s) 102, 171, 390, 699, 828
Bse8I GATNNNNATC 1 cut(s) 711
BseBI CCWGG 3 cut(s) 408, 1389, 1646
BseDI CCNNGG 4 cut(s) 277, 765, 1387, 1431
BseGI GGATG 6 cut(s) 140, 508, 522, 1059, 1397, 1600
BseJI GATNNNNATC 1 cut(s) 711
BseLI CCNNNNNNNGG 2 cut(s) 532, 1392
BseMII CTCAG 4 cut(s) 178, 1497, 1699, 1789
BseNI ACTGG 5 cut(s) 102, 171, 390, 699, 828
BseRI GAGGAG 1 cut(s) 819
BseXI GCAGC 4 cut(s) 1028, 1135, 1529, 1834
BseYI CCCAGC 1 cut(s) 1635
BsgI GTGCAG 1 cut(s) 1536
BshFI GGCC 3 cut(s) 1399, 1472, 1644
BsiHKAI GWGCWC 2 cut(s) 231, 588
BsiHKCI CYCGRG 1 cut(s) 1851
BsiSI CCGG 3 cut(s) 527, 765, 1875
BslFI GGGAC 3 cut(s) 681, 1297, 1783
BslI CCNNNNNNNGG 2 cut(s) 532, 1392
BsmAI GTCTC 3 cut(s) 285, 530, 1652
BsmBI CGTCTC 1 cut(s) 1652
BsmFI GGGAC 3 cut(s) 681, 1297, 1783
BsmI GAATGC 1 cut(s) 433
BsnI GGCC 3 cut(s) 1399, 1472, 1644
BsoBI CYCGRG 1 cut(s) 1851
Bsp119I TTCGAA 1 cut(s) 1262
Bsp1286I GDGCHC 2 cut(s) 231, 588
Bsp1407I TGTACA 1 cut(s) 663
Bsp143I GATC 9 cut(s) 596, 651, 712, 750, 916, 936, 1191, 1436, 1740
BspACI CCGC 2 cut(s) 1492, 1618
BspANI GGCC 3 cut(s) 1399, 1472, 1644
BspCNI CTCAG 4 cut(s) 177, 1498, 1698, 1788
BspLI GGNNCC 5 cut(s) 308, 405, 828, 918, 1128
BspMAI CTGCAG 3 cut(s) 441, 1018, 1153
BspMI ACCTGC 2 cut(s) 444, 1286
BspPI GGATC 6 cut(s) 604, 659, 911, 924, 931, 1444
BspT104I TTCGAA 1 cut(s) 1262
BsrGI TGTACA 1 cut(s) 663
BsrI ACTGG 5 cut(s) 102, 171, 390, 699, 828
BssECI CCNNGG 4 cut(s) 277, 765, 1387, 1431
BssMI GATC 9 cut(s) 596, 651, 712, 750, 916, 936, 1191, 1436, 1740
BssT1I CCWWGG 2 cut(s) 277, 1431
Bst2UI CCWGG 3 cut(s) 408, 1389, 1646
Bst4CI ACNGT 5 cut(s) 89, 112, 785, 1423, 1809
Bst6I CTCTTC 1 cut(s) 1348
BstAUI TGTACA 1 cut(s) 663
BstBI TTCGAA 1 cut(s) 1262
BstC8I GCNNGC 3 cut(s) 1486, 1490, 1837
BstDEI CTNAG 4 cut(s) 164, 1506, 1685, 1775
BstF5I GGATG 6 cut(s) 140, 508, 522, 1059, 1397, 1600
BstHHI GCGC 1 cut(s) 1165
BstKTI GATC 9 cut(s) 599, 654, 715, 753, 919, 939, 1194, 1439, 1743
BstMAI GTCTC 3 cut(s) 285, 530, 1652
BstMBI GATC 9 cut(s) 596, 651, 712, 750, 916, 936, 1191, 1436, 1740
BstMWI GCNNNNNNNGC 5 cut(s) 599, 1301, 1310, 1319, 1681
BstNI CCWGG 3 cut(s) 408, 1389, 1646
BstNSI RCATGY 2 cut(s) 898, 1839
BstSCI CCNGG 5 cut(s) 406, 525, 764, 1387, 1644
BstSFI CTRYAG 4 cut(s) 437, 576, 1014, 1149
BstV1I GCAGC 4 cut(s) 1028, 1135, 1529, 1834
BstV2I GAAGAC 2 cut(s) 345, 1086
BstX2I RGATCY 2 cut(s) 712, 916
BstYI RGATCY 2 cut(s) 712, 916
BsuI GTATCC 1 cut(s) 730
BsuRI GGCC 3 cut(s) 1399, 1472, 1644
BtrI CACGTC 1 cut(s) 1815
BtsCI GGATG 6 cut(s) 140, 508, 522, 1059, 1397, 1600
BtsIMutI CAGTG 6 cut(s) 108, 109, 178, 189, 821, 1419
BveI ACCTGC 2 cut(s) 444, 1286
Cac8I GCNNGC 3 cut(s) 1486, 1490, 1837
CaiI CAGNNNCTG 1 cut(s) 1157
CfoI GCGC 1 cut(s) 1165
Cfr13I GGNCC 2 cut(s) 1127, 1620
Csp6I GTAC 3 cut(s) 93, 481, 664
CviAII CATG 4 cut(s) 748, 895, 900, 1836
CviQI GTAC 3 cut(s) 93, 481, 664
DdeI CTNAG 4 cut(s) 164, 1506, 1685, 1775
DpnI GATC 9 cut(s) 598, 653, 714, 752, 918, 938, 1193, 1438, 1742
DpnII GATC 9 cut(s) 596, 651, 712, 750, 916, 936, 1191, 1436, 1740
Eam1104I CTCTTC 1 cut(s) 1348
EarI CTCTTC 1 cut(s) 1348
Ecl136II GAGCTC 2 cut(s) 229, 586
Eco130I CCWWGG 2 cut(s) 277, 1431
Eco147I AGGCCT 1 cut(s) 1644
Eco24I GRGCYC 2 cut(s) 231, 588
Eco47I GGWCC 2 cut(s) 1127, 1620
Eco53kI GAGCTC 2 cut(s) 229, 586
Eco57I CTGAAG 1 cut(s) 708
Eco88I CYCGRG 1 cut(s) 1851
EcoICRI GAGCTC 2 cut(s) 229, 586
EcoO109I RGGNCCY 1 cut(s) 1127
EcoRI GAATTC 2 cut(s) 177, 1652
EcoRII CCWGG 3 cut(s) 406, 1387, 1644
EcoT14I CCWWGG 2 cut(s) 277, 1431
EcoT22I ATGCAT 2 cut(s) 433, 1841
EcoT38I GRGCYC 2 cut(s) 231, 588
ErhI CCWWGG 2 cut(s) 277, 1431
Esp3I CGTCTC 1 cut(s) 1652
FaeI CATG 4 cut(s) 751, 898, 903, 1839
FalI AAGNNNNNCTT 2 cut(s) 1481, 1513
FaqI GGGAC 3 cut(s) 681, 1297, 1783
FatI CATG 4 cut(s) 747, 894, 899, 1835
FauNDI CATATG 1 cut(s) 220
FbaI TGATCA 1 cut(s) 750
FblI GTMKAC 1 cut(s) 1575
Fnu4HI GCNGC 4 cut(s) 1017, 1149, 1518, 1848
FokI GGATG 6 cut(s) 127, 509, 515, 1066, 1404, 1607
FriOI GRGCYC 2 cut(s) 231, 588
Fsp4HI GCNGC 4 cut(s) 1017, 1149, 1518, 1848
FspBI CTAG 6 cut(s) 509, 603, 741, 959, 1319, 1479
GlaI GCGC 1 cut(s) 1164
GluI GCNGC 4 cut(s) 1017, 1149, 1518, 1848
GsaI CCCAGC 1 cut(s) 1639
HaeIII GGCC 3 cut(s) 1399, 1472, 1644
HapII CCGG 3 cut(s) 527, 765, 1875
HhaI GCGC 1 cut(s) 1165
Hin1II CATG 4 cut(s) 751, 898, 903, 1839
Hin6I GCGC 1 cut(s) 1163
HinP1I GCGC 1 cut(s) 1163
HincII GTYRAC 1 cut(s) 1812
HindII GTYRAC 1 cut(s) 1812
HpaII CCGG 3 cut(s) 527, 765, 1875
HphI GGTGA 4 cut(s) 40, 146, 422, 1595
Hpy166II GTNNAC 6 cut(s) 997, 1222, 1414, 1576, 1799, 1812
Hpy188I TCNGA 6 cut(s) 381, 688, 712, 941, 1043, 1778
Hpy188III TCNNGA 9 cut(s) 447, 562, 704, 920, 1073, 1105, 1130, 1189, 1657
Hpy8I GTNNAC 6 cut(s) 997, 1222, 1414, 1576, 1799, 1812
HpyAV CCTTC 1 cut(s) 1877
HpyCH4III ACNGT 5 cut(s) 89, 112, 785, 1423, 1809
HpyCH4IV ACGT 2 cut(s) 483, 1814
HpyF10VI GCNNNNNNNGC 5 cut(s) 599, 1301, 1310, 1319, 1681
HpyF3I CTNAG 4 cut(s) 164, 1506, 1685, 1775
HpySE526I ACGT 2 cut(s) 483, 1814
Hsp92II CATG 4 cut(s) 751, 898, 903, 1839
HspAI GCGC 1 cut(s) 1163
Ksp22I TGATCA 1 cut(s) 750
Kzo9I GATC 9 cut(s) 596, 651, 712, 750, 916, 936, 1191, 1436, 1740
LmnI GCTCC 4 cut(s) 312, 832, 1292, 1877
Lsp1109I GCAGC 4 cut(s) 1028, 1135, 1529, 1834
LweI GCATC 3 cut(s) 493, 1150, 1662
MaeI CTAG 6 cut(s) 509, 603, 741, 959, 1319, 1479
MaeII ACGT 2 cut(s) 483, 1814
MaeIII GTNAC 3 cut(s) 106, 1367, 1500
MalI GATC 9 cut(s) 598, 653, 714, 752, 918, 938, 1193, 1438, 1742
MboI GATC 9 cut(s) 596, 651, 712, 750, 916, 936, 1191, 1436, 1740
MboII GAAGA 4 cut(s) 345, 456, 1086, 1365
MfeI CAATTG 1 cut(s) 1287
MflI RGATCY 2 cut(s) 712, 916
MhlI GDGCHC 2 cut(s) 231, 588
MlyI GAGTC 2 cut(s) 1241, 1765
MmeI TCCRAC 4 cut(s) 888, 964, 1537, 1647
Mph1103I ATGCAT 2 cut(s) 433, 1841
MroXI GAANNNNTTC 2 cut(s) 454, 887
MseI TTAA 1 cut(s) 552
MslI CAYNNNNRTG 2 cut(s) 426, 951
MspA1I CMGCKG 1 cut(s) 575
MspI CCGG 3 cut(s) 527, 765, 1875
MspR9I CCNGG 5 cut(s) 408, 527, 766, 1389, 1646
MunI CAATTG 1 cut(s) 1287
Mva1269I GAATGC 1 cut(s) 433
MvaI CCWGG 3 cut(s) 408, 1389, 1646
MwoI GCNNNNNNNGC 5 cut(s) 599, 1301, 1310, 1319, 1681
NciI CCSGG 2 cut(s) 527, 766
NdeI CATATG 1 cut(s) 220
NdeII GATC 9 cut(s) 596, 651, 712, 750, 916, 936, 1191, 1436, 1740
NlaIII CATG 4 cut(s) 751, 898, 903, 1839
NlaIV GGNNCC 5 cut(s) 308, 405, 828, 918, 1128
NmuCI GTSAC 2 cut(s) 106, 1367
NsiI ATGCAT 2 cut(s) 433, 1841
NspI RCATGY 2 cut(s) 898, 1839
NspV TTCGAA 1 cut(s) 1262
PaeI GCATGC 1 cut(s) 1839
PaeR7I CTCGAG 1 cut(s) 1851
PaqCI CACCTGC 1 cut(s) 1286
PceI AGGCCT 1 cut(s) 1644
PciI ACATGT 1 cut(s) 894
PctI GAATGC 1 cut(s) 433
PdmI GAANNNNTTC 2 cut(s) 454, 887
PfeI GAWTC 9 cut(s) 137, 212, 707, 815, 1117, 1207, 1453, 1510, 1716
PfoI TCCNGGA 1 cut(s) 525
PkrI GCNGC 4 cut(s) 1018, 1150, 1519, 1849
PleI GAGTC 2 cut(s) 1240, 1765
PpsI GAGTC 2 cut(s) 1240, 1765
PpuMI RGGWCCY 1 cut(s) 1127
PscI ACATGT 1 cut(s) 894
PshBI ATTAAT 1 cut(s) 552
Psp124BI GAGCTC 2 cut(s) 231, 588
Psp5II RGGWCCY 1 cut(s) 1127
Psp6I CCWGG 3 cut(s) 406, 1387, 1644
PspFI CCCAGC 1 cut(s) 1635
PspGI CCWGG 3 cut(s) 406, 1387, 1644
PspN4I GGNNCC 5 cut(s) 308, 405, 828, 918, 1128
PspPI GGNCC 2 cut(s) 1127, 1620
PspPPI RGGWCCY 1 cut(s) 1127
PspXI VCTCGAGB 1 cut(s) 1851
PstI CTGCAG 3 cut(s) 441, 1018, 1153
PstNI CAGNNNCTG 1 cut(s) 1157
PsuI RGATCY 2 cut(s) 712, 916
PvuII CAGCTG 1 cut(s) 575
RsaI GTAC 3 cut(s) 94, 482, 665
RsaNI GTAC 3 cut(s) 93, 481, 664
RseI CAYNNNNRTG 2 cut(s) 426, 951
SacI GAGCTC 2 cut(s) 231, 588
SaqAI TTAA 1 cut(s) 552
SatI GCNGC 4 cut(s) 1017, 1149, 1518, 1848
Sau3AI GATC 9 cut(s) 596, 651, 712, 750, 916, 936, 1191, 1436, 1740
Sau96I GGNCC 2 cut(s) 1127, 1620
SbfI CCTGCAGG 1 cut(s) 441
SchI GAGTC 2 cut(s) 1241, 1765
ScrFI CCNGG 5 cut(s) 408, 527, 766, 1389, 1646
SdaI CCTGCAGG 1 cut(s) 441
SduI GDGCHC 2 cut(s) 231, 588
SfaNI GCATC 3 cut(s) 493, 1150, 1662
SfcI CTRYAG 4 cut(s) 437, 576, 1014, 1149
Sfr274I CTCGAG 1 cut(s) 1851
SfuI TTCGAA 1 cut(s) 1262
SinI GGWCC 2 cut(s) 1127, 1620
SlaI CTCGAG 1 cut(s) 1851
SmiMI CAYNNNNRTG 2 cut(s) 426, 951
SmlI CTYRAG 1 cut(s) 1851
SmoI CTYRAG 1 cut(s) 1851
SpeI ACTAGT 1 cut(s) 508
SphI GCATGC 1 cut(s) 1839
Sse8387I CCTGCAGG 1 cut(s) 441
SseBI AGGCCT 1 cut(s) 1644
SsiI CCGC 2 cut(s) 1492, 1618
SspI AATATT 1 cut(s) 793
SspMI CTAG 6 cut(s) 509, 603, 741, 959, 1319, 1479
SstI GAGCTC 2 cut(s) 231, 588
StuI AGGCCT 1 cut(s) 1644
StyD4I CCNGG 5 cut(s) 406, 525, 764, 1387, 1644
StyI CCWWGG 2 cut(s) 277, 1431
TaaI ACNGT 5 cut(s) 89, 112, 785, 1423, 1809
TaiI ACGT 2 cut(s) 486, 1817
TatI WGTACW 1 cut(s) 663
TfiI GAWTC 9 cut(s) 137, 212, 707, 815, 1117, 1207, 1453, 1510, 1716
Tru1I TTAA 1 cut(s) 552
Tru9I TTAA 1 cut(s) 552
TscAI CASTG 6 cut(s) 109, 115, 178, 196, 828, 1426
TseFI GTSAC 2 cut(s) 106, 1367
TseI GCWGC 4 cut(s) 1016, 1148, 1517, 1847
Tsp45I GTSAC 2 cut(s) 106, 1367
TspDTI ATGAA 7 cut(s) 129, 511, 885, 1070, 1236, 1551, 1859
TspGWI ACGGA 2 cut(s) 1676, 1806
TspRI CASTG 6 cut(s) 109, 115, 178, 196, 828, 1426
VpaK11BI GGWCC 2 cut(s) 1127, 1620
VspI ATTAAT 1 cut(s) 552
XapI RAATTY 4 cut(s) 97, 177, 395, 1652
XceI RCATGY 2 cut(s) 898, 1839
XcmI CCANNNNNNNNNTGG 1 cut(s) 1812
XhoI CTCGAG 1 cut(s) 1851
XmiI GTMKAC 1 cut(s) 1575
XmnI GAANNNNTTC 2 cut(s) 454, 887
XspI CTAG 6 cut(s) 509, 603, 741, 959, 1319, 1479
Zsp2I ATGCAT 2 cut(s) 433, 1841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.