Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0017052

Physical Location & Seq

Genomic Coordinates Forward (+)

84047060 .. 84057372

Gene Structure 10313 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00062030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGAGGGAGGACTACATGTAGAGACAGATTCATCAGCTTTCAGAGACTGTTTCTCTTTGGCATGGAAGAACCCATATGTTCTTCGTCTGGCCTTCTCTGCTGGAATTGGTGGCCTCCTCTTTGGCTATGACACAGGTGATGACTCAGAGTTACATCAGGAGCTCTTCTTTACATCAGGGATCGATGACTTCAAGTCTGTGGACAGAGAGACTGTCTCACAGGAGAGCATAGTGAGCATGGCAGTGGCCAGAGCCATCATTGGAGCTGCAATAGGGGGATGGTTGAACAATAGGTATGGAAGAAGAAGTGCAATCCTTATAGCAGATTTCCTATTCTTCATTAGTGCCGTGATCGTGGCCTCGGCTCCTAACCCAGCTCTTCTCATTGTTGGCCGTGTTTTTGTTGAACTTGGTGTTGGAATGGCATCAATGACAGCTCCCTTGTACATCTCGGAAGTGTCTCCCGCCAAAATCCGAGTTCTGTCTTACCTCATCAATTTGGGTTTCACCAAGGGACTTAGCGGTGGATGCTTGGTGTTGCAGGAATTCCAGCTCTTCTCAGTTCATCCTAATCTTGCTCCTTCCGAATTTCCACGTTGGCTATTCCGAAAGTCCGGACGGCAAACCTATACTTCTCCGTGGCCAGCCACCACATTCGGCGATTTTGGACCAGCAGAGACTTGCGACTACTCCTTCGAGTCGAGACCAGCAAACCTATTTTCTCCGCCGCAGATCGAGACTTGTTCCGATAGGCTTGCGACCGGAACCTCGAACCTCGGATCGAGACTGCGGACCACGGATCGAGGAGTAGACGAGTTAGCCACTCGAACTAGTGATGCGGACCGAGGCCGTGATGTTGACGTATCCGATTCCAACGTGAGCCGAGGCGGTGGAGTAGGCGACGTCGACGCACAAGGTGTGGACTTCGTTCCCGGTCTTCATTATGCATCCACCGCCAACGCGAAGTTTGAGAAAGTTAGCAAAATTGAGTTAAACGAATGCCCGCCCGACCCTATACGGAAAGGTTGGCCGGCCGGCCCTTTTGGCCCTTGTGGAATGGGCCTTAAGGGTGGCAGTGACCTCCACTGGGAACCTCCACCGGCAGCCCAGTGCAATCCACTACCCGATCATCAACTTCAGTTTGATCATCTCTCACCGCTGGATGTCGACATCGTCCTCCGCTTGGCACCGTCACTGGTCACCGCCGCTAGCAGGCCAACTAGCAAGCTCCAACGTTCCAGCAAACCCCCTAGGCCTGCCATCCAGCGGCCCCGCTACTGCAAACCGCTAGCAAACAAGGCCTCCGCCGACCTCCAAGTGCTACCTCCGCGGAACTCAAAGTCATGGCCGTCTCTGCTGACTCCACGAGTCACCGCTGAGCACCAAGCTTTACCGCTGAACTTCACCGCTGGGCACCACCGCCCAACTTCCTCCGCTGAGCACCTCTGGACAAAGGCTCCGCCGACTAGGAACTCCGCCACCCAAGAGATCCGCTCCACTAGACAAGGCTCCGTTGGCCAAAAGTTCCGTCATCCAAGCTCCACTGATGTCCCAACTTATCCATCATCTACTCTGGCCACCTATATATCTTCTCTCGGCACCCAAGCTGTCTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005365 GO:0005366 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015166 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0015791 GO:0015798 GO:0015850 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0023052 GO:0034219 GO:0034220 GO:0042995 GO:0044464 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0090406 GO:0098655 GO:0098660 GO:0098662 GO:0120025 GO:1901618 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

538

Amino Acids

58.18

Weight (kDa)

7.64

Isoelectric Point (pI)

43.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	31 - 172	1.4e-26	Sugar (and other) transporter
MFS_1	PF07690	77 - 159	2.2e-09	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30220
prunus_persica	Prupe.4G083700_v2.0.a1 Prupe.4G083700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0014501
rosa_laevigata	RLG00000032118
rosa_roxburghii	Rroxscaffold_1G00062030
rosa_rugosa	Rorug05G0018600 Rorug05G0018700
rosa_samantha	Rh5AG114000 Rh5BG110700 Rh5BG110900 Rh5CG122500
rosa_wichuraiana	Rw5G009880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	906
AccB1I	GGYRCC	3 cut(s)	1186, 1413, 1598
AccBSI	CCGCTC	1 cut(s)	1494
AccI	GTMKAC	3 cut(s)	810, 906, 1167
AccII	CGCG	2 cut(s)	962, 1330
AccIII	TCCGGA	1 cut(s)	614
AclI	AACGTT	1 cut(s)	1234
AclWI	GGATC	4 cut(s)	188, 787, 807, 1483
AcoI	YGGCCR	8 cut(s)	246, 391, 641, 1028, 1032, 1346, 1516, 1575
AcsI	RAATTY	2 cut(s)	545, 587
AcuI	CTGAAG	1 cut(s)	1121
AcyI	GRCGYC	1 cut(s)	903
AdeI	CACNNNGTG	1 cut(s)	917
AfaI	GTAC	1 cut(s)	446
AfiI	CCNNNNNNNGG	4 cut(s)	1087, 1183, 1212, 1266
AflII	CTTAAG	1 cut(s)	1064
AflIII	ACRYGT	1 cut(s)	16
AgsI	TTSAA	3 cut(s)	193, 286, 407
AhdI	GACNNNNNGTC	1 cut(s)	193
AhlI	ACTAGT	1 cut(s)	830
AjuI	GAANNNNNNNTTGG	2 cut(s)	399, 431
Alw21I	GWGCWC	3 cut(s)	165, 1383, 1443
AlwI	GGATC	4 cut(s)	188, 787, 807, 1483
AlwNI	CAGNNNCTG	1 cut(s)	48
Aor13HI	TCCGGA	1 cut(s)	614
ApeKI	GCWGC	2 cut(s)	266, 1103
ApoI	RAATTY	2 cut(s)	545, 587
ArsI	GACNNNNNNTTYG	4 cut(s)	677, 709, 1513, 1545
AspA2I	CCTAGG	1 cut(s)	1250
AspS9I	GGNCC	7 cut(s)	668, 792, 841, 1037, 1046, 1060, 1269
AsuC2I	CCSGG	1 cut(s)	933
AsuHPI	GGTGA	6 cut(s)	149, 499, 1146, 1192, 1363, 1396
AsuNHI	GCTAGC	2 cut(s)	1208, 1288
AvaII	GGWCC	3 cut(s)	668, 792, 841
AvrII	CCTAGG	1 cut(s)	1250
BaeGI	GKGCMC	1 cut(s)	1416
BalI	TGGCCA	4 cut(s)	248, 643, 1518, 1577
BanI	GGYRCC	3 cut(s)	1186, 1413, 1598
BanII	GRGCYC	1 cut(s)	165
BauI	CACGAG	1 cut(s)	1365
BbsI	GAAGAC	1 cut(s)	929
Bbv12I	GWGCWC	3 cut(s)	165, 1383, 1443
BbvI	GCAGC	2 cut(s)	253, 1115
BccI	CCATC	4 cut(s)	263, 273, 1268, 1570
BceAI	ACGGC	5 cut(s)	332, 378, 635, 834, 1333
BcgI	CGANNNNNNTGC	2 cut(s)	737, 771
BciVI	GTATCC	1 cut(s)	874
BclI	TGATCA	1 cut(s)	1144
BcnI	CCSGG	1 cut(s)	933
BcuI	ACTAGT	1 cut(s)	830
BfaI	CTAG	7 cut(s)	831, 1209, 1221, 1251, 1289, 1467, 1500
BfrI	CTTAAG	1 cut(s)	1064
BfuI	GTATCC	1 cut(s)	874
BglI	GCCNNNNNGGC	1 cut(s)	1044
BisI	GCNGC	5 cut(s)	267, 728, 1104, 1206, 1268
BlnI	CCTAGG	1 cut(s)	1250
BlpI	GCTNAGC	2 cut(s)	1377, 1437
BlsI	GCNGC	5 cut(s)	268, 729, 1105, 1207, 1269
Bme1390I	CCNGG	1 cut(s)	933
Bme18I	GGWCC	3 cut(s)	668, 792, 841
BmeRI	GACNNNNNGTC	1 cut(s)	193
BmgT120I	GGNCC	7 cut(s)	668, 792, 841, 1037, 1046, 1060, 1269
BmiI	GGNNCC	9 cut(s)	366, 766, 1092, 1188, 1271, 1415, 1458, 1510, 1600
BmrFI	CCNGG	1 cut(s)	933
BmrI	ACTGGG	2 cut(s)	1096, 1102
BmsI	GCATC	4 cut(s)	434, 518, 826, 956
BmtI	GCTAGC	2 cut(s)	1212, 1292
BmuI	ACTGGG	2 cut(s)	1096, 1102
BpiI	GAAGAC	1 cut(s)	929
BplI	GAGNNNNNCTC	4 cut(s)	200, 232, 1478, 1510
Bpu1102I	GCTNAGC	2 cut(s)	1377, 1437
BpuMI	CCSGG	1 cut(s)	933
Bsa29I	ATCGAT	1 cut(s)	183
BsaHI	GRCGYC	1 cut(s)	903
BsaI	GGTCTC	1 cut(s)	697
BsaJI	CCNNGG	9 cut(s)	360, 510, 638, 775, 795, 844, 883, 1250, 1328
BsaWI	WCCGGW	2 cut(s)	614, 761
BsaXI	ACNNNNNCTCC	4 cut(s)	1286, 1316, 1441, 1471
Bsc4I	CCNNNNNNNGG	4 cut(s)	1087, 1183, 1212, 1266
Bse118I	RCCGGY	3 cut(s)	1030, 1034, 1099
Bse1I	ACTGG	3 cut(s)	1091, 1108, 1200
BseAI	TCCGGA	1 cut(s)	614
BseCI	ATCGAT	1 cut(s)	183
BseDI	CCNNGG	9 cut(s)	360, 510, 638, 775, 795, 844, 883, 1250, 1328
BseGI	GGATG	7 cut(s)	284, 533, 565, 947, 1168, 1260, 1531
BseLI	CCNNNNNNNGG	4 cut(s)	1087, 1183, 1212, 1266
BseMII	CTCAG	4 cut(s)	159, 573, 1368, 1428
BseNI	ACTGG	3 cut(s)	1091, 1108, 1200
BseRI	GAGGAG	2 cut(s)	107, 819
BseSI	GKGCMC	1 cut(s)	1416
BseX3I	CGGCCG	1 cut(s)	1032
BseXI	GCAGC	2 cut(s)	253, 1115
BseYI	CCCAGC	2 cut(s)	373, 1409
Bsh1236I	CGCG	2 cut(s)	962, 1330
Bsh1285I	CGRYCG	2 cut(s)	762, 1035
BshNI	GGYRCC	3 cut(s)	1186, 1413, 1598
BshVI	ATCGAT	1 cut(s)	183
BsiEI	CGRYCG	2 cut(s)	762, 1035
BsiHKAI	GWGCWC	3 cut(s)	165, 1383, 1443
BsiSI	CCGG	6 cut(s)	615, 762, 933, 1031, 1035, 1100
BslFI	GGGAC	2 cut(s)	528, 1535
BslI	CCNNNNNNNGG	4 cut(s)	1087, 1183, 1212, 1266
BsmBI	CGTCTC	1 cut(s)	1356
BsmFI	GGGAC	2 cut(s)	528, 1535
BsmI	GAATGC	1 cut(s)	1004
Bso31I	GGTCTC	1 cut(s)	697
Bsp1286I	GDGCHC	4 cut(s)	165, 1383, 1416, 1443
Bsp13I	TCCGGA	1 cut(s)	614
Bsp1407I	TGTACA	1 cut(s)	444
Bsp143I	GATC	8 cut(s)	180, 351, 732, 779, 799, 1126, 1144, 1488
Bsp1720I	GCTNAGC	2 cut(s)	1377, 1437
BspCNI	CTCAG	4 cut(s)	158, 572, 1369, 1429
BspDI	ATCGAT	1 cut(s)	183
BspEI	TCCGGA	1 cut(s)	614
BspFNI	CGCG	2 cut(s)	962, 1330
BspLI	GGNNCC	9 cut(s)	366, 766, 1092, 1188, 1271, 1415, 1458, 1510, 1600
BspOI	GCTAGC	2 cut(s)	1212, 1292
BspPI	GGATC	4 cut(s)	188, 787, 807, 1483
BspQI	GCTCTTC	3 cut(s)	170, 384, 560
BspT107I	GGYRCC	3 cut(s)	1186, 1413, 1598
BspTI	CTTAAG	1 cut(s)	1064
BspTNI	GGTCTC	1 cut(s)	697
BsrBI	CCGCTC	1 cut(s)	1494
BsrFI	RCCGGY	3 cut(s)	1030, 1034, 1099
BsrGI	TGTACA	1 cut(s)	444
BsrI	ACTGG	3 cut(s)	1091, 1108, 1200
BssAI	RCCGGY	3 cut(s)	1030, 1034, 1099
BssECI	CCNNGG	9 cut(s)	360, 510, 638, 775, 795, 844, 883, 1250, 1328
BssMI	GATC	8 cut(s)	180, 351, 732, 779, 799, 1126, 1144, 1488
BssNI	GRCGYC	1 cut(s)	903
BssSI	CACGAG	1 cut(s)	1365
BssT1I	CCWWGG	2 cut(s)	510, 1250
Bst2BI	CACGAG	1 cut(s)	1365
Bst4CI	ACNGT	3 cut(s)	50, 214, 1191
Bst6I	CTCTTC	3 cut(s)	170, 384, 560
BstACI	GRCGYC	1 cut(s)	903
BstAFI	CTTAAG	1 cut(s)	1064
BstAUI	TGTACA	1 cut(s)	444
BstDEI	CTNAG	5 cut(s)	145, 518, 559, 1377, 1437
BstDSI	CCRYGG	3 cut(s)	638, 795, 1328
BstEII	GGTNACC	1 cut(s)	1198
BstF5I	GGATG	7 cut(s)	284, 533, 565, 947, 1168, 1260, 1531
BstFNI	CGCG	2 cut(s)	962, 1330
BstKTI	GATC	8 cut(s)	183, 354, 735, 782, 802, 1129, 1147, 1491
BstMBI	GATC	8 cut(s)	180, 351, 732, 779, 799, 1126, 1144, 1488
BstMCI	CGRYCG	2 cut(s)	762, 1035
BstMWI	GCNNNNNNNGC	9 cut(s)	98, 234, 528, 953, 1044, 1298, 1327, 1354, 1515
BstNSI	RCATGY	1 cut(s)	20
BstPI	GGTNACC	1 cut(s)	1198
BstSCI	CCNGG	1 cut(s)	931
BstSLI	GKGCMC	1 cut(s)	1416
BstUI	CGCG	2 cut(s)	962, 1330
BstV1I	GCAGC	2 cut(s)	253, 1115
BstV2I	GAAGAC	1 cut(s)	929
BstX2I	RGATCY	1 cut(s)	1488
BstYI	RGATCY	1 cut(s)	1488
BstZI	CGGCCG	1 cut(s)	1032
Bsu15I	ATCGAT	1 cut(s)	183
BsuI	GTATCC	1 cut(s)	874
BsuTUI	ATCGAT	1 cut(s)	183
BtgI	CCRYGG	3 cut(s)	638, 795, 1328
BtsCI	GGATG	7 cut(s)	284, 533, 565, 947, 1168, 1260, 1531
BtsI	GCAGTG	2 cut(s)	249, 1081
BtsIMutI	CAGTG	6 cut(s)	249, 1081, 1084, 1115, 1193, 1542
CaiI	CAGNNNCTG	1 cut(s)	48
Cfr10I	RCCGGY	3 cut(s)	1030, 1034, 1099
Cfr13I	GGNCC	7 cut(s)	668, 792, 841, 1037, 1046, 1060, 1269
Cfr42I	CCGCGG	1 cut(s)	1331
ClaI	ATCGAT	1 cut(s)	183
CpoI	CGGWCCG	1 cut(s)	841
CseI	GACGC	1 cut(s)	917
Csp6I	GTAC	1 cut(s)	445
CspI	CGGWCCG	1 cut(s)	841
CviAII	CATG	4 cut(s)	17, 63, 238, 1344
CviQI	GTAC	1 cut(s)	445
DdeI	CTNAG	5 cut(s)	145, 518, 559, 1377, 1437
DpnI	GATC	8 cut(s)	182, 353, 734, 781, 801, 1128, 1146, 1490
DpnII	GATC	8 cut(s)	180, 351, 732, 779, 799, 1126, 1144, 1488
DraIII	CACNNNGTG	1 cut(s)	917
DriI	GACNNNNNGTC	1 cut(s)	193
EaeI	YGGCCR	8 cut(s)	246, 391, 641, 1028, 1032, 1346, 1516, 1575
EagI	CGGCCG	1 cut(s)	1032
Eam1104I	CTCTTC	3 cut(s)	170, 384, 560
Eam1105I	GACNNNNNGTC	1 cut(s)	193
EarI	CTCTTC	3 cut(s)	170, 384, 560
EciI	GGCGGA	4 cut(s)	714, 1294, 1449, 1465
Ecl136II	GAGCTC	1 cut(s)	163
EclXI	CGGCCG	1 cut(s)	1032
Eco130I	CCWWGG	2 cut(s)	510, 1250
Eco147I	AGGCCT	2 cut(s)	1255, 1301
Eco24I	GRGCYC	1 cut(s)	165
Eco31I	GGTCTC	1 cut(s)	697
Eco47I	GGWCC	3 cut(s)	668, 792, 841
Eco52I	CGGCCG	1 cut(s)	1032
Eco53kI	GAGCTC	1 cut(s)	163
Eco57I	CTGAAG	1 cut(s)	1121
Eco91I	GGTNACC	1 cut(s)	1198
EcoICRI	GAGCTC	1 cut(s)	163
EcoO65I	GGTNACC	1 cut(s)	1198
EcoRI	GAATTC	1 cut(s)	545
EcoT14I	CCWWGG	2 cut(s)	510, 1250
EcoT22I	ATGCAT	1 cut(s)	949
EcoT38I	GRGCYC	1 cut(s)	165
ErhI	CCWWGG	2 cut(s)	510, 1250
Esp3I	CGTCTC	1 cut(s)	1356
FaeI	CATG	4 cut(s)	20, 66, 241, 1347
FaqI	GGGAC	2 cut(s)	528, 1535
FatI	CATG	4 cut(s)	16, 62, 237, 1343
FauI	CCCGC	3 cut(s)	472, 1011, 1280
FauNDI	CATATG	1 cut(s)	76
FbaI	TGATCA	1 cut(s)	1144
FblI	GTMKAC	3 cut(s)	810, 906, 1167
Fnu4HI	GCNGC	5 cut(s)	267, 728, 1104, 1206, 1268
FokI	GGATG	7 cut(s)	291, 540, 552, 934, 1175, 1247, 1518
FriOI	GRGCYC	1 cut(s)	165
FseI	GGCCGGCC	2 cut(s)	1034, 1038
Fsp4HI	GCNGC	5 cut(s)	267, 728, 1104, 1206, 1268
FspBI	CTAG	7 cut(s)	831, 1209, 1221, 1251, 1289, 1467, 1500
GluI	GCNGC	5 cut(s)	267, 728, 1104, 1206, 1268
GsaI	CCCAGC	2 cut(s)	377, 1413
HapII	CCGG	6 cut(s)	615, 762, 933, 1031, 1035, 1100
HgaI	GACGC	1 cut(s)	917
Hin1I	GRCGYC	1 cut(s)	903
Hin1II	CATG	4 cut(s)	20, 66, 241, 1347
HincII	GTYRAC	3 cut(s)	859, 907, 1168
HindII	GTYRAC	3 cut(s)	859, 907, 1168
HindIII	AAGCTT	1 cut(s)	1386
HinfI	GANTC	6 cut(s)	29, 143, 698, 869, 1360, 1368
HpaII	CCGG	6 cut(s)	615, 762, 933, 1031, 1035, 1100
HphI	GGTGA	6 cut(s)	149, 499, 1146, 1192, 1363, 1396
Hpy166II	GTNNAC	6 cut(s)	202, 811, 859, 907, 922, 1168
Hpy188I	TCNGA	9 cut(s)	44, 148, 454, 476, 586, 608, 748, 779, 868
Hpy188III	TCNNGA	6 cut(s)	158, 615, 702, 736, 783, 1447
Hpy8I	GTNNAC	6 cut(s)	202, 811, 859, 907, 922, 1168
Hpy99I	CGWCG	3 cut(s)	905, 908, 911
HpyAV	CCTTC	3 cut(s)	103, 591, 703
HpyCH4III	ACNGT	3 cut(s)	50, 214, 1191
HpyCH4IV	ACGT	5 cut(s)	595, 861, 876, 903, 1234
HpyCH4V	TGCA	6 cut(s)	269, 311, 541, 947, 1113, 1281
HpyF10VI	GCNNNNNNNGC	9 cut(s)	98, 234, 528, 953, 1044, 1298, 1327, 1354, 1515
HpyF3I	CTNAG	5 cut(s)	145, 518, 559, 1377, 1437
HpySE526I	ACGT	5 cut(s)	595, 861, 876, 903, 1234
Hsp92I	GRCGYC	1 cut(s)	903
Hsp92II	CATG	4 cut(s)	20, 66, 241, 1347
Kpn2I	TCCGGA	1 cut(s)	614
KroI	GCCGGC	2 cut(s)	1030, 1034
KroNI	GCCGGC	2 cut(s)	1032, 1036
Ksp22I	TGATCA	1 cut(s)	1144
KspI	CCGCGG	1 cut(s)	1331
Kzo9I	GATC	8 cut(s)	180, 351, 732, 779, 799, 1126, 1144, 1488
LguI	GCTCTTC	3 cut(s)	170, 384, 560
Lsp1109I	GCAGC	2 cut(s)	253, 1115
LweI	GCATC	4 cut(s)	434, 518, 826, 956
MaeI	CTAG	7 cut(s)	831, 1209, 1221, 1251, 1289, 1467, 1500
MaeII	ACGT	5 cut(s)	595, 861, 876, 903, 1234
MaeIII	GTNAC	5 cut(s)	150, 1076, 1191, 1198, 1369
MalI	GATC	8 cut(s)	182, 353, 734, 781, 801, 1128, 1146, 1490
MbiI	CCGCTC	1 cut(s)	1494
MboI	GATC	8 cut(s)	180, 351, 732, 779, 799, 1126, 1144, 1488
MflI	RGATCY	1 cut(s)	1488
MhlI	GDGCHC	4 cut(s)	165, 1383, 1416, 1443
MlsI	TGGCCA	4 cut(s)	248, 643, 1518, 1577
MluCI	AATT	5 cut(s)	105, 496, 545, 587, 984
MluNI	TGGCCA	4 cut(s)	248, 643, 1518, 1577
MlyI	GAGTC	4 cut(s)	137, 707, 1354, 1377
MmeI	TCCRAC	3 cut(s)	397, 897, 1255
Mox20I	TGGCCA	4 cut(s)	248, 643, 1518, 1577
Mph1103I	ATGCAT	1 cut(s)	949
MroI	TCCGGA	1 cut(s)	614
MroNI	GCCGGC	2 cut(s)	1030, 1034
MscI	TGGCCA	4 cut(s)	248, 643, 1518, 1577
MseI	TTAA	2 cut(s)	992, 1065
MslI	CAYNNNNRTG	1 cut(s)	242
Msp20I	TGGCCA	4 cut(s)	248, 643, 1518, 1577
MspA1I	CMGCKG	7 cut(s)	1159, 1267, 1330, 1376, 1396, 1409, 1436
MspCI	CTTAAG	1 cut(s)	1064
MspI	CCGG	6 cut(s)	615, 762, 933, 1031, 1035, 1100
MspR9I	CCNGG	1 cut(s)	933
Mva1269I	GAATGC	1 cut(s)	1004
MvnI	CGCG	2 cut(s)	962, 1330
MwoI	GCNNNNNNNGC	9 cut(s)	98, 234, 528, 953, 1044, 1298, 1327, 1354, 1515
NaeI	GCCGGC	2 cut(s)	1032, 1036
NciI	CCSGG	1 cut(s)	933
NdeI	CATATG	1 cut(s)	76
NdeII	GATC	8 cut(s)	180, 351, 732, 779, 799, 1126, 1144, 1488
NgoMIV	GCCGGC	2 cut(s)	1030, 1034
NheI	GCTAGC	2 cut(s)	1208, 1288
NlaIII	CATG	4 cut(s)	20, 66, 241, 1347
NlaIV	GGNNCC	9 cut(s)	366, 766, 1092, 1188, 1271, 1415, 1458, 1510, 1600
NmeAIII	GCCGAG	3 cut(s)	341, 908, 1575
NmuCI	GTSAC	4 cut(s)	1076, 1191, 1198, 1369
NsiI	ATGCAT	1 cut(s)	949
NspI	RCATGY	1 cut(s)	20
PceI	AGGCCT	2 cut(s)	1255, 1301
PciI	ACATGT	1 cut(s)	16
PciSI	GCTCTTC	3 cut(s)	170, 384, 560
PctI	GAATGC	1 cut(s)	1004
PdiI	GCCGGC	2 cut(s)	1032, 1036
PfeI	GAWTC	2 cut(s)	29, 869
PflFI	GACNNNGTC	1 cut(s)	1172
PkrI	GCNGC	5 cut(s)	268, 729, 1105, 1207, 1269
PleI	GAGTC	4 cut(s)	137, 706, 1354, 1376
PpsI	GAGTC	4 cut(s)	137, 706, 1354, 1376
PscI	ACATGT	1 cut(s)	16
Psp124BI	GAGCTC	1 cut(s)	165
Psp1406I	AACGTT	1 cut(s)	1234
PspEI	GGTNACC	1 cut(s)	1198
PspFI	CCCAGC	2 cut(s)	373, 1409
PspN4I	GGNNCC	9 cut(s)	366, 766, 1092, 1188, 1271, 1415, 1458, 1510, 1600
PspPI	GGNCC	7 cut(s)	668, 792, 841, 1037, 1046, 1060, 1269
PstNI	CAGNNNCTG	1 cut(s)	48
PsuI	RGATCY	1 cut(s)	1488
PsyI	GACNNNGTC	1 cut(s)	1172
RigI	GGCCGGCC	2 cut(s)	1034, 1038
RsaI	GTAC	1 cut(s)	446
RsaNI	GTAC	1 cut(s)	445
RseI	CAYNNNNRTG	1 cut(s)	242
Rsr2I	CGGWCCG	1 cut(s)	841
RsrII	CGGWCCG	1 cut(s)	841
SacI	GAGCTC	1 cut(s)	165
SacII	CCGCGG	1 cut(s)	1331
SalI	GTCGAC	2 cut(s)	905, 1166
SapI	GCTCTTC	3 cut(s)	170, 384, 560
SaqAI	TTAA	2 cut(s)	992, 1065
SatI	GCNGC	5 cut(s)	267, 728, 1104, 1206, 1268
Sau3AI	GATC	8 cut(s)	180, 351, 732, 779, 799, 1126, 1144, 1488
Sau96I	GGNCC	7 cut(s)	668, 792, 841, 1037, 1046, 1060, 1269
SchI	GAGTC	4 cut(s)	137, 707, 1354, 1377
ScrFI	CCNGG	1 cut(s)	933
SduI	GDGCHC	4 cut(s)	165, 1383, 1416, 1443
SfaNI	GCATC	4 cut(s)	434, 518, 826, 956
SfiI	GGCCNNNNNGGCC	1 cut(s)	1044
Sfr303I	CCGCGG	1 cut(s)	1331
SgrBI	CCGCGG	1 cut(s)	1331
SgrDI	CGTCGACG	1 cut(s)	905
SinI	GGWCC	3 cut(s)	668, 792, 841
SmiMI	CAYNNNNRTG	1 cut(s)	242
SmlI	CTYRAG	1 cut(s)	1064
SmoI	CTYRAG	1 cut(s)	1064
SpeI	ACTAGT	1 cut(s)	830
Sse9I	AATT	5 cut(s)	105, 496, 545, 587, 984
SseBI	AGGCCT	2 cut(s)	1255, 1301
SspMI	CTAG	7 cut(s)	831, 1209, 1221, 1251, 1289, 1467, 1500
SstI	GAGCTC	1 cut(s)	165
StuI	AGGCCT	2 cut(s)	1255, 1301
StyD4I	CCNGG	1 cut(s)	931
StyI	CCWWGG	2 cut(s)	510, 1250
TaaI	ACNGT	3 cut(s)	50, 214, 1191
TaiI	ACGT	5 cut(s)	598, 864, 879, 906, 1237
TaqII	GACCGA	1 cut(s)	858
TasI	AATT	5 cut(s)	105, 496, 545, 587, 984
TatI	WGTACW	1 cut(s)	444
TauI	GCSGC	3 cut(s)	730, 1208, 1270
TfiI	GAWTC	2 cut(s)	29, 869
Tru1I	TTAA	2 cut(s)	992, 1065
Tru9I	TTAA	2 cut(s)	992, 1065
TscAI	CASTG	6 cut(s)	249, 1081, 1091, 1115, 1200, 1549
TseFI	GTSAC	4 cut(s)	1076, 1191, 1198, 1369
TseI	GCWGC	2 cut(s)	266, 1103
Tsp45I	GTSAC	4 cut(s)	1076, 1191, 1198, 1369
TspDTI	ATGAA	4 cut(s)	21, 328, 554, 929
TspGWI	ACGGA	5 cut(s)	627, 812, 1033, 1501, 1517
TspRI	CASTG	6 cut(s)	249, 1081, 1091, 1115, 1200, 1549
Tth111I	GACNNNGTC	1 cut(s)	1172
Vha464I	CTTAAG	1 cut(s)	1064
VpaK11BI	GGWCC	3 cut(s)	668, 792, 841
XapI	RAATTY	2 cut(s)	545, 587
XceI	RCATGY	1 cut(s)	20
XmaJI	CCTAGG	1 cut(s)	1250
XmiI	GTMKAC	3 cut(s)	810, 906, 1167
XspI	CTAG	7 cut(s)	831, 1209, 1221, 1251, 1289, 1467, 1500
ZraI	GACGTC	1 cut(s)	904
Zsp2I	ATGCAT	1 cut(s)	949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.