Rroxscaffold_2G00105440

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0015989
Physical Location & Seq
Forward (+)
28852190 .. 28857618
5429 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00105440.1

Sequence Viewer

Length: 1695 bp
ATGCAAATCGAAGAGAAGAGCCGGAGATCTAGGATTAGAGGTGCCATACGGTATACCCGGTGGTGGTTGAGATCGAATGTGAAGAGAAAGCCACCGGTTAGGGATTTTGATTCGAGACGAAGAGGTCGCAGGCCTTGTTGTCGTTGCCGGGAGAAGAAGCCTCATTTAAGGTTCCGATGCAGATCGGTGGATGGCCTCGTCGAAGAGCCGGAGACCATAACAACTTTGTCATGTAGATCGCGCCATGCCTCCAAGTCGTCACCGGCATCAAGAATGAGGAAAGGGGCACCCATTTCCCCTCAGTCACCCACTCTATTTTTCACTCGTTCTGAAACCACAAAGCTGGAGTCACTCCCTCAAATGCCACTCTCTCCTCCCTCCCAGAAAACCCCACCCAAAATGCTCGAGCGCGTCCTCTCCTCCCGCCGCTACGCCTCCCACCCCGACGCCGACAGCGACGTCGCCGCCGACGATTCCAAGACCAAAAAACACTTGCCCATCTCCTTCTTCACCACCCGAATCACCAACTACTTGACCCGAACCGGACCCGTCTGGCCCTGCCTCCTCCTCCTCGTCTTCGTCCTCTTCCTCATCTTCTCCCTCATCTACAACTCCCGCAGATTCGTCTGCGTCTCGCCTTACGACCCCGCCTCCCGCACCGGCTTCTACGGCTTCGATGGCCTCGAATCCGATTTCGGATCCCTCGGCGTGCCCTGGTGCAGACCGAAACACGGAAAAACAGTGGATTGGACGTCCAAGGATTTGATCAAGGCATTGGAAGTGTTTGTACCAATCTATGAAACCCGACCGATCAAAAACAACATGTATGGGATGGGATTTGACCACAGCTTTGGGCTCTGGTTCATTGCCCAGTGGCTGAAGCCAGATTTGATGATTGAGAGCGGTGCTTTCAAGGGGCATTCTACTTGGGTTTTGCGACAAGCAATGCCAGACAAGCCAATTGTGTCCCTTTCACCACGGCATCCTGAGAAGTATCTGAAGAAGGGGCCTGCATATGTTGATGCAAACTGTACTTACTTTGCTGGAAAAGACTTTGTTGATTTTGGAAGTGTTGATTGGGAAAAGGTGTTGAAGAAACATGGGATTACTGATCTCGGTCGTGTTCTCATCTTTTTCGATGACCATCAGAATGAATTGAAAAGAATAAAGCAGGCTCTGAAGGCTGGTTTCCGCCATATGGTTTTTGAGGACAATTATGATACTGGAACTGGTGATCATTATTCCTTAAGGCAGATATGTGATCAATCCTATATTAGAGGAGGTGGTCACAGTTGCATTAAGGACAGTGATGAAGCTCGGATTAGGTCAAAAAGGAAGCATTTCTGGGAGAAAGCAGTTGATATAGATGAACTTTGTGGGCCGGGTGAAGCATGGTGGGGTGTTAGAGGGTACATGCGGGATAACTTTAACCACAGTCATAAGTTGATACCATATGAAGAACATTTTCAGAACAGCCGGTTTGTGGAATCAATTCTTGATGTTTACTGGGAGCTGCCACCAGTGGCAGGACCATCGCTCACACATCAGACTAGATATGATCCTGCTCGTGCACCACCTCCCATTGTTGAAGATGGTCGGTATGGCTTATTCCAACGGCTTGGTCTAACCAGATTCGATACTTCTGTATTTAATGGATACACTCAGATGGTTTACATTCAGATATCTAAACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

564

Amino Acids

65.28

Weight (kDa)

9.59

Isoelectric Point (pI)

51.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015989)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G16200
fragaria_vesca FvH4_6g31940
malus_domestica MD09G1207900.v1.1 MD17G1189000.v1.1
prunus_persica Prupe.3G064100_v2.0.a1
pyrus_communis pycom09g12410 pycom17g19730
rosa_chinensis RchiOBHm_Chr2g0139361
rosa_laevigata RLG00000019808
rosa_multiflora Rmu_sc0004390.1_g000004
rosa_roxburghii Rroxscaffold_2G00105440
rosa_rugosa Rorug02G0357700
rosa_samantha Rh2DG426500
rosa_wichuraiana Rw2G032980 Rw2G033240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 123, 458
AatII GACGTC 2 cut(s) 462, 755
AccB1I GGYRCC 2 cut(s) 41, 286
AccBSI CCGCTC 1 cut(s) 903
AccI GTMKAC 1 cut(s) 53
AccII CGCG 2 cut(s) 241, 411
AciI CCGC 9 cut(s) 424, 427, 465, 616, 648, 655, 903, 1192, 1417
AclWI GGATC 3 cut(s) 693, 706, 1553
AcuI CTGAAG 3 cut(s) 899, 1019, 1199
AcyI GRCGYC 3 cut(s) 447, 459, 752
AfaI GTAC 3 cut(s) 789, 1033, 1412
AfiI CCNNNNNNNGG 5 cut(s) 63, 731, 1198, 1483, 1526
AflII CTTAAG 1 cut(s) 1246
AflIII ACRYGT 1 cut(s) 822
AgeI ACCGGT 1 cut(s) 94
AgsI TTSAA 4 cut(s) 913, 1093, 1159, 1589
AjnI CCWGG 1 cut(s) 713
AjuI GAANNNNNNNTTGG 2 cut(s) 1060, 1092
AluBI AGCT 4 cut(s) 343, 849, 1316, 1513
AluI AGCT 4 cut(s) 343, 849, 1316, 1513
Alw21I GWGCWC 1 cut(s) 1573
Alw26I GTCTC 3 cut(s) 109, 206, 637
Alw44I GTGCAC 1 cut(s) 1569
AlwI GGATC 3 cut(s) 693, 706, 1553
AlwNI CAGNNNCTG 2 cut(s) 877, 1177
Ama87I CYCGRG 1 cut(s) 404
AoxI GGCC 6 cut(s) 131, 193, 554, 679, 1007, 1379
ApaLI GTGCAC 1 cut(s) 1569
ApeKI GCWGC 1 cut(s) 1513
ArsI GACNNNNNNTTYG 4 cut(s) 332, 364, 833, 865
AsiGI ACCGGT 1 cut(s) 94
Asp700I GAANNNNTTC 3 cut(s) 1340, 1464, 1491
AspLEI GCGC 2 cut(s) 243, 411
AspS9I GGNCC 5 cut(s) 545, 555, 1007, 1379, 1529
AsuC2I CCSGG 3 cut(s) 58, 149, 1383
AsuHPI GGTGA 7 cut(s) 252, 297, 502, 514, 966, 1244, 1397
AvaI CYCGRG 1 cut(s) 404
AvaII GGWCC 2 cut(s) 545, 1529
BaeGI GKGCMC 3 cut(s) 289, 714, 1573
BaeI ACNNNNGTAYC 2 cut(s) 1629, 1662
BamHI GGATCC 1 cut(s) 698
BanI GGYRCC 2 cut(s) 41, 286
BanII GRGCYC 1 cut(s) 858
BarI GAAGNNNNNNTAC 2 cut(s) 771, 803
BauI CACGAG 1 cut(s) 1566
BbsI GAAGAC 1 cut(s) 568
Bbv12I GWGCWC 1 cut(s) 1573
BbvI GCAGC 1 cut(s) 1500
BccI CCATC 8 cut(s) 185, 506, 671, 826, 1152, 1540, 1586, 1660
BceAI ACGGC 3 cut(s) 685, 995, 1631
BcgI CGANNNNNNTGC 2 cut(s) 1515, 1549
BciT130I CCWGG 1 cut(s) 715
BciVI GTATCC 1 cut(s) 1649
BclI TGATCA 3 cut(s) 765, 1234, 1261
BcnI CCSGG 3 cut(s) 58, 149, 1383
BcoDI GTCTC 3 cut(s) 109, 206, 637
BfaI CTAG 2 cut(s) 30, 1551
BfrI CTTAAG 1 cut(s) 1246
BfuI GTATCC 1 cut(s) 1649
BglII AGATCT 1 cut(s) 26
BisI GCNGC 3 cut(s) 427, 465, 1514
BlsI GCNGC 3 cut(s) 428, 466, 1515
Bme1390I CCNGG 4 cut(s) 58, 149, 715, 1383
Bme18I GGWCC 2 cut(s) 545, 1529
BmeT110I CYCGRG 1 cut(s) 404
BmgT120I GGNCC 5 cut(s) 545, 555, 1007, 1379, 1529
BmiI GGNNCC 6 cut(s) 43, 173, 288, 547, 700, 1008
BmrFI CCNGG 4 cut(s) 58, 149, 715, 1383
BmrI ACTGGG 2 cut(s) 865, 1516
BmsI GCATC 4 cut(s) 167, 275, 991, 1012
BmuI ACTGGG 2 cut(s) 865, 1516
BpiI GAAGAC 1 cut(s) 568
BpmI CTGGAG 1 cut(s) 365
BpuMI CCSGG 3 cut(s) 58, 149, 1383
BsaBI GATNNNNATC 2 cut(s) 181, 1143
BsaHI GRCGYC 3 cut(s) 447, 459, 752
BsaI GGTCTC 1 cut(s) 206
BsaJI CCNNGG 4 cut(s) 703, 713, 756, 977
BsaWI WCCGGW 2 cut(s) 94, 542
BsaXI ACNNNNNCTCC 2 cut(s) 635, 665
Bsc4I CCNNNNNNNGG 5 cut(s) 63, 731, 1198, 1483, 1526
Bse118I RCCGGY 4 cut(s) 94, 262, 659, 1476
Bse1I ACTGG 5 cut(s) 871, 1228, 1234, 1511, 1520
Bse3DI GCAATG 2 cut(s) 864, 951
Bse8I GATNNNNATC 2 cut(s) 181, 1143
BseBI CCWGG 1 cut(s) 715
BseDI CCNNGG 4 cut(s) 703, 713, 756, 977
BseGI GGATG 3 cut(s) 196, 837, 982
BseJI GATNNNNATC 2 cut(s) 181, 1143
BseLI CCNNNNNNNGG 5 cut(s) 63, 731, 1198, 1483, 1526
BseMI GCAATG 2 cut(s) 864, 951
BseMII CTCAG 3 cut(s) 314, 978, 1676
BseNI ACTGG 5 cut(s) 871, 1228, 1234, 1511, 1520
BseRI GAGGAG 6 cut(s) 363, 409, 554, 557, 560, 1293
BseSI GKGCMC 3 cut(s) 289, 714, 1573
BseXI GCAGC 1 cut(s) 1500
BsgI GTGCAG 1 cut(s) 739
Bsh1236I CGCG 2 cut(s) 241, 411
Bsh1285I CGRYCG 2 cut(s) 809, 1120
BshFI GGCC 6 cut(s) 133, 195, 556, 681, 1009, 1381
BshNI GGYRCC 2 cut(s) 41, 286
BshTI ACCGGT 1 cut(s) 94
BsiEI CGRYCG 2 cut(s) 809, 1120
BsiHKAI GWGCWC 1 cut(s) 1573
BsiHKCI CYCGRG 1 cut(s) 404
BslFI GGGAC 1 cut(s) 952
BslI CCNNNNNNNGG 5 cut(s) 63, 731, 1198, 1483, 1526
BsmAI GTCTC 3 cut(s) 109, 206, 637
BsmBI CGTCTC 2 cut(s) 109, 637
BsmFI GGGAC 1 cut(s) 952
BsmI GAATGC 1 cut(s) 919
BsnI GGCC 6 cut(s) 133, 195, 556, 681, 1009, 1381
Bso31I GGTCTC 1 cut(s) 206
BsoBI CYCGRG 1 cut(s) 404
Bsp1286I GDGCHC 4 cut(s) 289, 714, 858, 1573
BspACI CCGC 9 cut(s) 424, 427, 465, 616, 648, 655, 903, 1192, 1417
BspANI GGCC 6 cut(s) 133, 195, 556, 681, 1009, 1381
BspCNI CTCAG 3 cut(s) 313, 979, 1675
BspFNI CGCG 2 cut(s) 241, 411
BspLI GGNNCC 6 cut(s) 43, 173, 288, 547, 700, 1008
BspPI GGATC 3 cut(s) 693, 706, 1553
BspQI GCTCTTC 2 cut(s) 11, 198
BspT107I GGYRCC 2 cut(s) 41, 286
BspTI CTTAAG 1 cut(s) 1246
BspTNI GGTCTC 1 cut(s) 206
BsrBI CCGCTC 1 cut(s) 903
BsrDI GCAATG 2 cut(s) 864, 951
BsrFI RCCGGY 4 cut(s) 94, 262, 659, 1476
BsrI ACTGG 5 cut(s) 871, 1228, 1234, 1511, 1520
BssAI RCCGGY 4 cut(s) 94, 262, 659, 1476
BssECI CCNNGG 4 cut(s) 703, 713, 756, 977
BssNAI GTATAC 1 cut(s) 54
BssNI GRCGYC 3 cut(s) 447, 459, 752
BssSI CACGAG 1 cut(s) 1566
BssT1I CCWWGG 1 cut(s) 756
Bst1107I GTATAC 1 cut(s) 54
Bst2BI CACGAG 1 cut(s) 1566
Bst2UI CCWGG 1 cut(s) 715
Bst4CI ACNGT 7 cut(s) 51, 742, 1031, 1292, 1307, 1436, 1692
Bst6I CTCTTC 6 cut(s) 6, 11, 77, 115, 198, 590
BstACI GRCGYC 3 cut(s) 447, 459, 752
BstAFI CTTAAG 1 cut(s) 1246
BstC8I GCNNGC 4 cut(s) 131, 710, 1011, 1173
BstDEI CTNAG 3 cut(s) 300, 987, 1662
BstDSI CCRYGG 1 cut(s) 977
BstF5I GGATG 3 cut(s) 196, 837, 982
BstFNI CGCG 2 cut(s) 241, 411
BstHHI GCGC 2 cut(s) 243, 411
BstMAI GTCTC 3 cut(s) 109, 206, 637
BstMCI CGRYCG 2 cut(s) 809, 1120
BstMWI GCNNNNNNNGC 4 cut(s) 669, 678, 955, 1181
BstNI CCWGG 1 cut(s) 715
BstNSI RCATGY 2 cut(s) 826, 1417
BstSCI CCNGG 4 cut(s) 56, 147, 713, 1381
BstSLI GKGCMC 3 cut(s) 289, 714, 1573
BstUI CGCG 2 cut(s) 241, 411
BstV1I GCAGC 1 cut(s) 1500
BstV2I GAAGAC 1 cut(s) 568
BstX2I RGATCY 2 cut(s) 26, 698
BstXI CCANNNNNNTGG 3 cut(s) 343, 851, 1619
BstYI RGATCY 2 cut(s) 26, 698
BstZ17I GTATAC 1 cut(s) 54
BsuI GTATCC 1 cut(s) 1649
BsuRI GGCC 6 cut(s) 133, 195, 556, 681, 1009, 1381
BtgI CCRYGG 1 cut(s) 977
BtgZI GCGATG 1 cut(s) 1518
BtsCI GGATG 3 cut(s) 196, 837, 982
BtsIMutI CAGTG 4 cut(s) 747, 878, 1312, 1527
Cac8I GCNNGC 4 cut(s) 131, 710, 1011, 1173
CaiI CAGNNNCTG 2 cut(s) 877, 1177
CfoI GCGC 2 cut(s) 243, 411
Cfr10I RCCGGY 4 cut(s) 94, 262, 659, 1476
Cfr13I GGNCC 5 cut(s) 545, 555, 1007, 1379, 1529
CseI GACGC 3 cut(s) 400, 455, 619
Csp6I GTAC 3 cut(s) 788, 1032, 1411
CspAI ACCGGT 1 cut(s) 94
CviAII CATG 6 cut(s) 231, 245, 823, 1100, 1392, 1414
CviQI GTAC 3 cut(s) 788, 1032, 1411
DdeI CTNAG 3 cut(s) 300, 987, 1662
DrdI GACNNNNNNGTC 2 cut(s) 123, 458
DseDI GACNNNNNNGTC 2 cut(s) 123, 458
Eam1104I CTCTTC 6 cut(s) 6, 11, 77, 115, 198, 590
EarI CTCTTC 6 cut(s) 6, 11, 77, 115, 198, 590
EciI GGCGGA 1 cut(s) 1181
Eco130I CCWWGG 1 cut(s) 756
Eco147I AGGCCT 1 cut(s) 133
Eco24I GRGCYC 1 cut(s) 858
Eco31I GGTCTC 1 cut(s) 206
Eco32I GATATC 1 cut(s) 1683
Eco47I GGWCC 2 cut(s) 545, 1529
Eco57I CTGAAG 3 cut(s) 899, 1019, 1199
Eco88I CYCGRG 1 cut(s) 404
EcoO109I RGGNCCY 1 cut(s) 1007
EcoRII CCWGG 1 cut(s) 713
EcoRV GATATC 1 cut(s) 1683
EcoT14I CCWWGG 1 cut(s) 756
EcoT38I GRGCYC 1 cut(s) 858
ErhI CCWWGG 1 cut(s) 756
Esp3I CGTCTC 2 cut(s) 109, 637
FaeI CATG 6 cut(s) 234, 248, 826, 1103, 1395, 1417
FaqI GGGAC 1 cut(s) 952
FatI CATG 6 cut(s) 230, 244, 822, 1099, 1391, 1413
FauI CCCGC 5 cut(s) 431, 623, 655, 662, 1410
FauNDI CATATG 3 cut(s) 1015, 1197, 1453
FbaI TGATCA 3 cut(s) 765, 1234, 1261
FblI GTMKAC 1 cut(s) 53
Fnu4HI GCNGC 3 cut(s) 427, 465, 1514
FokI GGATG 3 cut(s) 203, 844, 969
FriOI GRGCYC 1 cut(s) 858
Fsp4HI GCNGC 3 cut(s) 427, 465, 1514
FspBI CTAG 2 cut(s) 30, 1551
GlaI GCGC 2 cut(s) 242, 410
GluI GCNGC 3 cut(s) 427, 465, 1514
GsuI CTGGAG 1 cut(s) 365
HaeIII GGCC 6 cut(s) 133, 195, 556, 681, 1009, 1381
HgaI GACGC 3 cut(s) 400, 455, 619
HhaI GCGC 2 cut(s) 243, 411
Hin1I GRCGYC 3 cut(s) 447, 459, 752
Hin1II CATG 6 cut(s) 234, 248, 826, 1103, 1395, 1417
Hin6I GCGC 2 cut(s) 241, 409
HinP1I GCGC 2 cut(s) 241, 409
HinfI GANTC 8 cut(s) 110, 347, 473, 519, 621, 686, 1487, 1632
HphI GGTGA 7 cut(s) 252, 297, 502, 514, 966, 1244, 1397
Hpy166II GTNNAC 4 cut(s) 54, 1504, 1571, 1672
Hpy188III TCNNGA 4 cut(s) 114, 270, 986, 1496
Hpy8I GTNNAC 4 cut(s) 54, 1504, 1571, 1672
Hpy99I CGWCG 5 cut(s) 203, 449, 461, 464, 473
HpyAV CCTTC 3 cut(s) 514, 997, 1174
HpyCH4III ACNGT 7 cut(s) 51, 742, 1031, 1292, 1307, 1436, 1692
HpyCH4IV ACGT 2 cut(s) 459, 752
HpyCH4V TGCA 7 cut(s) 4, 180, 720, 1013, 1025, 1296, 1571
HpyF10VI GCNNNNNNNGC 4 cut(s) 669, 678, 955, 1181
HpyF3I CTNAG 3 cut(s) 300, 987, 1662
HpySE526I ACGT 2 cut(s) 459, 752
Hsp92I GRCGYC 3 cut(s) 447, 459, 752
Hsp92II CATG 6 cut(s) 234, 248, 826, 1103, 1395, 1417
HspAI GCGC 2 cut(s) 241, 409
Ksp22I TGATCA 3 cut(s) 765, 1234, 1261
LguI GCTCTTC 2 cut(s) 11, 198
LmnI GCTCC 1 cut(s) 1510
Lsp1109I GCAGC 1 cut(s) 1500
LweI GCATC 4 cut(s) 167, 275, 991, 1012
MaeI CTAG 2 cut(s) 30, 1551
MaeII ACGT 2 cut(s) 459, 752
MaeIII GTNAC 4 cut(s) 258, 303, 348, 1286
MbiI CCGCTC 1 cut(s) 903
MfeI CAATTG 1 cut(s) 960
MflI RGATCY 2 cut(s) 26, 698
MhlI GDGCHC 4 cut(s) 289, 714, 858, 1573
MluCI AATT 4 cut(s) 960, 1154, 1213, 1491
MlyI GAGTC 1 cut(s) 356
MmeI TCCRAC 1 cut(s) 1636
MroXI GAANNNNTTC 3 cut(s) 1340, 1464, 1491
MseI TTAA 5 cut(s) 167, 1247, 1299, 1428, 1650
MslI CAYNNNNRTG 2 cut(s) 1149, 1664
MspCI CTTAAG 1 cut(s) 1246
MspR9I CCNGG 4 cut(s) 58, 149, 715, 1383
MunI CAATTG 1 cut(s) 960
Mva1269I GAATGC 1 cut(s) 919
MvaI CCWGG 1 cut(s) 715
MvnI CGCG 2 cut(s) 241, 411
MwoI GCNNNNNNNGC 4 cut(s) 669, 678, 955, 1181
NciI CCSGG 3 cut(s) 58, 149, 1383
NdeI CATATG 3 cut(s) 1015, 1197, 1453
NlaIII CATG 6 cut(s) 234, 248, 826, 1103, 1395, 1417
NlaIV GGNNCC 6 cut(s) 43, 173, 288, 547, 700, 1008
NmeAIII GCCGAG 1 cut(s) 684
NmuCI GTSAC 4 cut(s) 258, 303, 348, 1286
NspI RCATGY 2 cut(s) 826, 1417
PaeR7I CTCGAG 1 cut(s) 404
PceI AGGCCT 1 cut(s) 133
PciI ACATGT 1 cut(s) 822
PciSI GCTCTTC 2 cut(s) 11, 198
PcsI WCGNNNNNNNCGW 4 cut(s) 453, 465, 468, 681
PctI GAATGC 1 cut(s) 919
PdmI GAANNNNTTC 3 cut(s) 1340, 1464, 1491
PfeI GAWTC 7 cut(s) 110, 473, 519, 621, 686, 1487, 1632
PinAI ACCGGT 1 cut(s) 94
PkrI GCNGC 3 cut(s) 428, 466, 1515
PleI GAGTC 1 cut(s) 355
PpsI GAGTC 1 cut(s) 355
PscI ACATGT 1 cut(s) 822
Psp6I CCWGG 1 cut(s) 713
PspGI CCWGG 1 cut(s) 713
PspN4I GGNNCC 6 cut(s) 43, 173, 288, 547, 700, 1008
PspPI GGNCC 5 cut(s) 545, 555, 1007, 1379, 1529
PspXI VCTCGAGB 1 cut(s) 404
PstNI CAGNNNCTG 2 cut(s) 877, 1177
PsuI RGATCY 2 cut(s) 26, 698
RsaI GTAC 3 cut(s) 789, 1033, 1412
RsaNI GTAC 3 cut(s) 788, 1032, 1411
RseI CAYNNNNRTG 2 cut(s) 1149, 1664
SapI GCTCTTC 2 cut(s) 11, 198
SaqAI TTAA 5 cut(s) 167, 1247, 1299, 1428, 1650
SatI GCNGC 3 cut(s) 427, 465, 1514
Sau96I GGNCC 5 cut(s) 545, 555, 1007, 1379, 1529
SchI GAGTC 1 cut(s) 356
ScrFI CCNGG 4 cut(s) 58, 149, 715, 1383
SduI GDGCHC 4 cut(s) 289, 714, 858, 1573
SfaNI GCATC 4 cut(s) 167, 275, 991, 1012
Sfr274I CTCGAG 1 cut(s) 404
SinI GGWCC 2 cut(s) 545, 1529
SlaI CTCGAG 1 cut(s) 404
SmiMI CAYNNNNRTG 2 cut(s) 1149, 1664
SmlI CTYRAG 2 cut(s) 404, 1246
SmoI CTYRAG 2 cut(s) 404, 1246
Sse9I AATT 4 cut(s) 960, 1154, 1213, 1491
SseBI AGGCCT 1 cut(s) 133
SsiI CCGC 9 cut(s) 424, 427, 465, 616, 648, 655, 903, 1192, 1417
SspMI CTAG 2 cut(s) 30, 1551
StuI AGGCCT 1 cut(s) 133
StyD4I CCNGG 4 cut(s) 56, 147, 713, 1381
StyI CCWWGG 1 cut(s) 756
TaaI ACNGT 7 cut(s) 51, 742, 1031, 1292, 1307, 1436, 1692
TaiI ACGT 2 cut(s) 462, 755
TaqI TCGA 9 cut(s) 9, 74, 113, 201, 405, 675, 684, 1137, 1635
TaqII GACCGA 3 cut(s) 739, 823, 1106
TasI AATT 4 cut(s) 960, 1154, 1213, 1491
TatI WGTACW 1 cut(s) 1031
TauI GCSGC 2 cut(s) 429, 467
TfiI GAWTC 7 cut(s) 110, 473, 519, 621, 686, 1487, 1632
Tru1I TTAA 5 cut(s) 167, 1247, 1299, 1428, 1650
Tru9I TTAA 5 cut(s) 167, 1247, 1299, 1428, 1650
TscAI CASTG 4 cut(s) 747, 878, 1312, 1527
TseFI GTSAC 4 cut(s) 258, 303, 348, 1286
TseI GCWGC 1 cut(s) 1513
Tsp45I GTSAC 4 cut(s) 258, 303, 348, 1286
TspDTI ATGAA 6 cut(s) 813, 853, 1167, 1326, 1383, 1470
TspGWI ACGGA 1 cut(s) 747
TspRI CASTG 4 cut(s) 747, 878, 1312, 1527
Vha464I CTTAAG 1 cut(s) 1246
VneI GTGCAC 1 cut(s) 1569
VpaK11BI GGWCC 2 cut(s) 545, 1529
XceI RCATGY 2 cut(s) 826, 1417
XhoI CTCGAG 1 cut(s) 404
XmiI GTMKAC 1 cut(s) 53
XmnI GAANNNNTTC 3 cut(s) 1340, 1464, 1491
XspI CTAG 2 cut(s) 30, 1551
ZraI GACGTC 2 cut(s) 460, 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.