Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007985

Physical Location & Seq

Genomic Coordinates Reverse (-)

49988925 .. 49990823

Gene Structure 1899 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00118470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGCGTGATGCTCTCTTGCTCTCCTCTCTCCCGTCTTCGCTCGAGTTTCTGCACCCACTTCATGGGTTTTCAGAGAAAGTGAGTAATTGGAACTCTGCAAAGCAGGAGCTTCGATGTGGTCTCAGGAAGTCCTATAGAACTGGTCGTGTTAAGGCTAGTAGTAGTGCCCTTCTGGAGCTTGTGCCTGAAACCAAGAAGGAGAATCTCGAGTTTGAGCTTCCCTTGTATGACCCATCAAAGGGTCTTGTGGTGGACCTTGCAGTCGTGGGAGGCGGCCCTGCAGGGCTTGCGGTGGCACAGCAAGTCTCGGAGGCAGGGCTCTCCGTTTGCTCGATTGATCCCTCTCCCAAGTTAATCTGGCCCAACAATTATGGTGTTTGGGTAGATGAGTTTGAGGCCATGGATTTGCTTGATTGCCTCGACACTACCTGGTCCGGTGCTGTTGTGTTCATAGATGAACAATCAAAGAAGGATCTTGACAGGCCATATGGGAGGGTTAATAGGAAGCAGCTCAAGTCCAAAATGCTGCAGAAATGCATTTCAAATGGTGTCAAGTTTCATCAAGCTAAAGTCAGTAATGTTATTCACGAGGAGGAAAAATCACTCTTGATTTGCAACGATGGCGTCACAATTCAAGCTTCTGTGGTTCTTGATGCAACAGGTTTTTCAAGATGCCTTGTACAGTATGATAAGCCTTACAACCCAGGTTACCAAGTGGCATATGGGATTTTGGCAGAGGTTGAAGAACATCCATTTGATGTGGATAAGATGGTTTTCATGGATTGGAGAGATTCGCATTTGAAGAATAGTCCTGAACTGAAAGAGAGAAATAGTAAGATCCCTACTTTTCTATATGCAATGCCTTTTTCATCCAACAGGATATTTCTTGAAGAAACCTCCCTAGTTGCTCGGCCTGGACTACCCATGAAAGATATCCAGGAAAGGATGGTTGCTAGATTGAGGCACCTAGGCATAAAGGTTAAGAGCATTGAAGAGGATGAGCATTGTGTCATTCCGATGGGCGGGCCCCTCCCGGTGCTCCCTCAAAGAGTTGTTGGAATTGGAGGTACAGCTGGGATGGTGCATCCTTCAACAGGATATATGGTTGCAAGGACTCTGGCAGCAGCTCCTATTGTTGCAAATGCCATAGTTGAGTACCTTGGTGCTGATAGAAGTCTTTCAGGGAATGAACTTTCAGCAGAAGTTTGGAAAGATTTATGGCCCATACAAAGGAGGAGACAAAGGGAGTTCTTCTGTTTCGGCATGTCCATTCTGCTCAAGCTGGATTTGAATGCCACAAGAAGGTTTTTCAATGCATTTTTTGATCTAGAACCTCGTTATTGGCATGGATTCTTGTCATCTCGACTGTTTCTTCCCGATCTTGTATTTTTCGGGCTTTCACTGTTTTCTCATGCTTCAAATGCTAGTAGATTAGAAATAATGGGAAAGGGAACTATTCCTTTGGTAAAGATGATCAACAACTTGATACAGGATAGAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009507 GO:0009509 GO:0009536 GO:0009975 GO:0009987 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016853 GO:0016860 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0045436 GO:0046148 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

Lycopene_cycl

Protein Analysis

500

Amino Acids

56.06

Weight (kDa)

6.85

Isoelectric Point (pI)

38.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lycopene_cycl	PF05834	85 - 477	4.5e-149	Lycopene cyclase protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10230 AT3G10230
fragaria_vesca	FvH4_6g25130 FvH4_6g25130 FvH4_6g25130 FvH4_6g25130
malus_domestica	MD00G1049000.v1.1 MD00G1074700.v1.1
prunus_persica	Prupe.7G046100_v2.0.a1
pyrus_communis	pycom14g07340
rosa_chinensis	RchiOBHm_Chr2g0125001
rosa_laevigata	RLG00000018841
rosa_multiflora	Rmu_sc0000796.1_g000023 Rmu_sc0000796.1_g000027 Rmu_sc0008068.1_g000002 Rmu_sc0010311.1_g000002
rosa_roxburghii	Rroxscaffold_2G00118470 Rroxscaffold_2G00118770
rosa_rugosa	Rorug02G0254700
rosa_samantha	Rh2AG313400 Rh2BG321700 Rh2CG302900 Rh2DG338800
rosa_wichuraiana	Rw2G025310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	260
AccB1I	GGYRCC	1 cut(s)	963
AccB7I	CCANNNNNTGG	1 cut(s)	62
AciI	CCGC	3 cut(s)	273, 290, 1023
AclWI	GGATC	3 cut(s)	332, 480, 832
AcyI	GRCGYC	1 cut(s)	624
AfaI	GTAC	3 cut(s)	681, 1069, 1157
AfiI	CCNNNNNNNGG	7 cut(s)	62, 238, 239, 1022, 1094, 1230, 1302
AjnI	CCWGG	4 cut(s)	428, 703, 913, 936
AluBI	AGCT	9 cut(s)	109, 178, 217, 511, 566, 638, 1073, 1127, 1282
AluI	AGCT	9 cut(s)	109, 178, 217, 511, 566, 638, 1073, 1127, 1282
Alw21I	GWGCWC	1 cut(s)	1041
Alw26I	GTCTC	3 cut(s)	125, 310, 1231
AlwI	GGATC	3 cut(s)	332, 480, 832
Ama87I	CYCGRG	2 cut(s)	41, 206
AoxI	GGCC	7 cut(s)	274, 359, 396, 482, 911, 1025, 1220
ApaI	GGGCCC	1 cut(s)	1029
ApeKI	GCWGC	4 cut(s)	508, 526, 1121, 1124
Asp700I	GAANNNNTTC	1 cut(s)	1177
AspA2I	CCTAGG	1 cut(s)	967
AspS9I	GGNCC	7 cut(s)	253, 275, 360, 432, 1025, 1026, 1221
AsuC2I	CCSGG	1 cut(s)	1034
AvaI	CYCGRG	2 cut(s)	41, 206
AvaII	GGWCC	2 cut(s)	253, 432
AvrII	CCTAGG	1 cut(s)	967
BaeGI	GKGCMC	2 cut(s)	169, 1029
BanI	GGYRCC	1 cut(s)	963
BanII	GRGCYC	2 cut(s)	321, 1029
BauI	CACGAG	1 cut(s)	587
BbsI	GAAGAC	1 cut(s)	27
Bbv12I	GWGCWC	1 cut(s)	1041
BbvI	GCAGC	4 cut(s)	513, 520, 1133, 1136
BccI	CCATC	6 cut(s)	241, 614, 763, 940, 1012, 1072
BcgI	CGANNNNNNTGC	2 cut(s)	92, 126
BciT130I	CCWGG	4 cut(s)	430, 705, 915, 938
BclI	TGATCA	1 cut(s)	1473
BcnI	CCSGG	1 cut(s)	1034
BcoDI	GTCTC	3 cut(s)	125, 310, 1231
BfaI	CTAG	6 cut(s)	156, 902, 954, 968, 1328, 1425
BfmI	CTRYAG	3 cut(s)	133, 279, 527
BisI	GCNGC	5 cut(s)	274, 509, 527, 1122, 1125
BlnI	CCTAGG	1 cut(s)	967
BlsI	GCNGC	5 cut(s)	275, 510, 528, 1123, 1126
Bme1390I	CCNGG	5 cut(s)	430, 705, 915, 938, 1034
Bme18I	GGWCC	2 cut(s)	253, 432
BmeT110I	CYCGRG	2 cut(s)	41, 206
BmgT120I	GGNCC	7 cut(s)	253, 275, 360, 432, 1025, 1026, 1221
BmiI	GGNNCC	3 cut(s)	965, 1027, 1028
BmrFI	CCNGG	5 cut(s)	430, 705, 915, 938, 1034
BmsI	GCATC	3 cut(s)	643, 662, 1093
BpiI	GAAGAC	1 cut(s)	27
BpmI	CTGGAG	1 cut(s)	194
BpuEI	CTTGAG	2 cut(s)	497, 1262
BpuMI	CCSGG	1 cut(s)	1034
BsaHI	GRCGYC	1 cut(s)	624
BsaI	GGTCTC	1 cut(s)	125
BsaJI	CCNNGG	4 cut(s)	399, 703, 967, 1159
BsaWI	WCCGGW	1 cut(s)	434
Bsc4I	CCNNNNNNNGG	7 cut(s)	62, 238, 239, 1022, 1094, 1230, 1302
Bse1I	ACTGG	1 cut(s)	145
Bse3DI	GCAATG	1 cut(s)	864
BseBI	CCWGG	4 cut(s)	430, 705, 915, 938
BseDI	CCNNGG	4 cut(s)	399, 703, 967, 1159
BseGI	GGATG	6 cut(s)	748, 869, 951, 1003, 1083, 1084
BseLI	CCNNNNNNNGG	7 cut(s)	62, 238, 239, 1022, 1094, 1230, 1302
BseMI	GCAATG	1 cut(s)	864
BseMII	CTCAG	1 cut(s)	136
BseNI	ACTGG	1 cut(s)	145
BseRI	GAGGAG	3 cut(s)	13, 605, 1249
BseSI	GKGCMC	2 cut(s)	169, 1029
BseXI	GCAGC	4 cut(s)	513, 520, 1133, 1136
BseYI	CCCAGC	1 cut(s)	1073
BsgI	GTGCAG	1 cut(s)	35
BshFI	GGCC	7 cut(s)	276, 361, 398, 484, 913, 1027, 1222
BshNI	GGYRCC	1 cut(s)	963
BsiHKAI	GWGCWC	1 cut(s)	1041
BsiHKCI	CYCGRG	2 cut(s)	41, 206
BsiSI	CCGG	2 cut(s)	435, 1034
BslI	CCNNNNNNNGG	7 cut(s)	62, 238, 239, 1022, 1094, 1230, 1302
BsmAI	GTCTC	3 cut(s)	125, 310, 1231
BsmI	GAATGC	1 cut(s)	1297
BsnI	GGCC	7 cut(s)	276, 361, 398, 484, 913, 1027, 1222
Bso31I	GGTCTC	1 cut(s)	125
BsoBI	CYCGRG	2 cut(s)	41, 206
Bsp120I	GGGCCC	1 cut(s)	1025
Bsp1286I	GDGCHC	4 cut(s)	169, 321, 1029, 1041
Bsp1407I	TGTACA	1 cut(s)	679
Bsp143I	GATC	6 cut(s)	337, 472, 837, 1324, 1378, 1473
Bsp19I	CCATGG	1 cut(s)	399
BspACI	CCGC	3 cut(s)	273, 290, 1023
BspANI	GGCC	7 cut(s)	276, 361, 398, 484, 913, 1027, 1222
BspCNI	CTCAG	1 cut(s)	135
BspLI	GGNNCC	3 cut(s)	965, 1027, 1028
BspMAI	CTGCAG	2 cut(s)	283, 531
BspPI	GGATC	3 cut(s)	332, 480, 832
BspT107I	GGYRCC	1 cut(s)	963
BspTNI	GGTCTC	1 cut(s)	125
BsrDI	GCAATG	1 cut(s)	864
BsrGI	TGTACA	1 cut(s)	679
BsrI	ACTGG	1 cut(s)	145
BssECI	CCNNGG	4 cut(s)	399, 703, 967, 1159
BssMI	GATC	6 cut(s)	337, 472, 837, 1324, 1378, 1473
BssNI	GRCGYC	1 cut(s)	624
BssSI	CACGAG	1 cut(s)	587
BssT1I	CCWWGG	3 cut(s)	399, 967, 1159
Bst2BI	CACGAG	1 cut(s)	587
Bst2UI	CCWGG	4 cut(s)	430, 705, 915, 938
Bst4CI	ACNGT	3 cut(s)	684, 1368, 1404
Bst6I	CTCTTC	1 cut(s)	987
BstACI	GRCGYC	1 cut(s)	624
BstAPI	GCANNNNNTGC	1 cut(s)	287
BstAUI	TGTACA	1 cut(s)	679
BstC8I	GCNNGC	2 cut(s)	288, 1025
BstDEI	CTNAG	1 cut(s)	122
BstDSI	CCRYGG	1 cut(s)	399
BstEII	GGTNACC	1 cut(s)	707
BstENI	CCTNNNNNAGG	1 cut(s)	1092
BstF5I	GGATG	6 cut(s)	748, 869, 951, 1003, 1083, 1084
BstKTI	GATC	6 cut(s)	340, 475, 840, 1327, 1381, 1476
BstMAI	GTCTC	3 cut(s)	125, 310, 1231
BstMBI	GATC	6 cut(s)	337, 472, 837, 1324, 1378, 1473
BstMWI	GCNNNNNNNGC	3 cut(s)	287, 621, 1421
BstNI	CCWGG	4 cut(s)	430, 705, 915, 938
BstNSI	RCATGY	1 cut(s)	1267
BstPI	GGTNACC	1 cut(s)	707
BstSCI	CCNGG	5 cut(s)	428, 703, 913, 936, 1032
BstSFI	CTRYAG	3 cut(s)	133, 279, 527
BstSLI	GKGCMC	2 cut(s)	169, 1029
BstV1I	GCAGC	4 cut(s)	513, 520, 1133, 1136
BstV2I	GAAGAC	1 cut(s)	27
BstX2I	RGATCY	2 cut(s)	472, 837
BstYI	RGATCY	2 cut(s)	472, 837
BsuRI	GGCC	7 cut(s)	276, 361, 398, 484, 913, 1027, 1222
BtgI	CCRYGG	1 cut(s)	399
BtsCI	GGATG	6 cut(s)	748, 869, 951, 1003, 1083, 1084
BtsIMutI	CAGTG	1 cut(s)	1400
Cac8I	GCNNGC	2 cut(s)	288, 1025
Cfr13I	GGNCC	7 cut(s)	253, 275, 360, 432, 1025, 1026, 1221
CseI	GACGC	1 cut(s)	613
CsiI	ACCWGGT	1 cut(s)	428
Csp6I	GTAC	3 cut(s)	680, 1068, 1156
CviAII	CATG	7 cut(s)	62, 400, 778, 925, 1264, 1346, 1412
CviQI	GTAC	3 cut(s)	680, 1068, 1156
DdeI	CTNAG	1 cut(s)	122
DpnI	GATC	6 cut(s)	339, 474, 839, 1326, 1380, 1475
DpnII	GATC	6 cut(s)	337, 472, 837, 1324, 1378, 1473
DrdI	GACNNNNNNGTC	1 cut(s)	260
DseDI	GACNNNNNNGTC	1 cut(s)	260
Eam1104I	CTCTTC	1 cut(s)	987
EarI	CTCTTC	1 cut(s)	987
Eco130I	CCWWGG	3 cut(s)	399, 967, 1159
Eco24I	GRGCYC	2 cut(s)	321, 1029
Eco31I	GGTCTC	1 cut(s)	125
Eco32I	GATATC	1 cut(s)	934
Eco47I	GGWCC	2 cut(s)	253, 432
Eco88I	CYCGRG	2 cut(s)	41, 206
Eco91I	GGTNACC	1 cut(s)	707
EcoNI	CCTNNNNNAGG	1 cut(s)	1092
EcoO109I	RGGNCCY	1 cut(s)	1026
EcoO65I	GGTNACC	1 cut(s)	707
EcoRII	CCWGG	4 cut(s)	428, 703, 913, 936
EcoRV	GATATC	1 cut(s)	934
EcoT14I	CCWWGG	3 cut(s)	399, 967, 1159
EcoT22I	ATGCAT	2 cut(s)	539, 1318
EcoT38I	GRGCYC	2 cut(s)	321, 1029
ErhI	CCWWGG	3 cut(s)	399, 967, 1159
FaeI	CATG	7 cut(s)	65, 403, 781, 928, 1267, 1349, 1415
FatI	CATG	7 cut(s)	61, 399, 777, 924, 1263, 1345, 1411
FauI	CCCGC	1 cut(s)	1016
FauNDI	CATATG	2 cut(s)	487, 721
FbaI	TGATCA	1 cut(s)	1473
Fnu4HI	GCNGC	5 cut(s)	274, 509, 527, 1122, 1125
FokI	GGATG	6 cut(s)	735, 856, 958, 1010, 1071, 1090
FriOI	GRGCYC	2 cut(s)	321, 1029
Fsp4HI	GCNGC	5 cut(s)	274, 509, 527, 1122, 1125
FspBI	CTAG	6 cut(s)	156, 902, 954, 968, 1328, 1425
GluI	GCNGC	5 cut(s)	274, 509, 527, 1122, 1125
GsaI	CCCAGC	1 cut(s)	1077
GsuI	CTGGAG	1 cut(s)	194
HaeIII	GGCC	7 cut(s)	276, 361, 398, 484, 913, 1027, 1222
HapII	CCGG	2 cut(s)	435, 1034
HgaI	GACGC	1 cut(s)	613
Hin1I	GRCGYC	1 cut(s)	624
Hin1II	CATG	7 cut(s)	65, 403, 781, 928, 1267, 1349, 1415
HindIII	AAGCTT	1 cut(s)	636
HinfI	GANTC	4 cut(s)	202, 791, 1114, 1350
HpaII	CCGG	2 cut(s)	435, 1034
Hpy166II	GTNNAC	1 cut(s)	253
Hpy188I	TCNGA	3 cut(s)	73, 310, 1017
Hpy8I	GTNNAC	1 cut(s)	253
HpyAV	CCTTC	5 cut(s)	179, 190, 463, 1098, 1296
HpyCH4III	ACNGT	3 cut(s)	684, 1368, 1404
HpyF10VI	GCNNNNNNNGC	3 cut(s)	287, 621, 1421
HpyF3I	CTNAG	1 cut(s)	122
Hsp92I	GRCGYC	1 cut(s)	624
Hsp92II	CATG	7 cut(s)	65, 403, 781, 928, 1267, 1349, 1415
Ksp22I	TGATCA	1 cut(s)	1473
Kzo9I	GATC	6 cut(s)	337, 472, 837, 1324, 1378, 1473
LmnI	GCTCC	4 cut(s)	106, 175, 1044, 1132
Lsp1109I	GCAGC	4 cut(s)	513, 520, 1133, 1136
LweI	GCATC	3 cut(s)	643, 662, 1093
MabI	ACCWGGT	1 cut(s)	428
MaeI	CTAG	6 cut(s)	156, 902, 954, 968, 1328, 1425
MaeIII	GTNAC	2 cut(s)	625, 707
MalI	GATC	6 cut(s)	339, 474, 839, 1326, 1380, 1475
MboI	GATC	6 cut(s)	337, 472, 837, 1324, 1378, 1473
MboII	GAAGA	7 cut(s)	27, 755, 814, 902, 1004, 1243, 1364
MflI	RGATCY	2 cut(s)	472, 837
MhlI	GDGCHC	4 cut(s)	169, 321, 1029, 1041
MluCI	AATT	4 cut(s)	85, 367, 630, 1059
MlyI	GAGTC	1 cut(s)	1108
MmeI	TCCRAC	2 cut(s)	897, 1036
Mph1103I	ATGCAT	2 cut(s)	539, 1318
MroXI	GAANNNNTTC	1 cut(s)	1177
MseI	TTAA	4 cut(s)	150, 353, 498, 981
MslI	CAYNNNNRTG	1 cut(s)	1016
MspA1I	CMGCKG	1 cut(s)	1073
MspI	CCGG	2 cut(s)	435, 1034
MspR9I	CCNGG	5 cut(s)	430, 705, 915, 938, 1034
Mva1269I	GAATGC	1 cut(s)	1297
MvaI	CCWGG	4 cut(s)	430, 705, 915, 938
MwoI	GCNNNNNNNGC	3 cut(s)	287, 621, 1421
NciI	CCSGG	1 cut(s)	1034
NcoI	CCATGG	1 cut(s)	399
NdeI	CATATG	2 cut(s)	487, 721
NdeII	GATC	6 cut(s)	337, 472, 837, 1324, 1378, 1473
NlaIII	CATG	7 cut(s)	65, 403, 781, 928, 1267, 1349, 1415
NlaIV	GGNNCC	3 cut(s)	965, 1027, 1028
NmeAIII	GCCGAG	1 cut(s)	889
NmuCI	GTSAC	1 cut(s)	625
NsiI	ATGCAT	2 cut(s)	539, 1318
NspI	RCATGY	1 cut(s)	1267
PaeR7I	CTCGAG	2 cut(s)	41, 206
PctI	GAATGC	1 cut(s)	1297
PdmI	GAANNNNTTC	1 cut(s)	1177
PfeI	GAWTC	3 cut(s)	202, 791, 1350
PflMI	CCANNNNNTGG	1 cut(s)	62
PfoI	TCCNGGA	1 cut(s)	936
PkrI	GCNGC	5 cut(s)	275, 510, 528, 1123, 1126
PleI	GAGTC	1 cut(s)	1108
PpsI	GAGTC	1 cut(s)	1108
Psp6I	CCWGG	4 cut(s)	428, 703, 913, 936
PspEI	GGTNACC	1 cut(s)	707
PspFI	CCCAGC	1 cut(s)	1073
PspGI	CCWGG	4 cut(s)	428, 703, 913, 936
PspN4I	GGNNCC	3 cut(s)	965, 1027, 1028
PspOMI	GGGCCC	1 cut(s)	1025
PspPI	GGNCC	7 cut(s)	253, 275, 360, 432, 1025, 1026, 1221
PspXI	VCTCGAGB	1 cut(s)	41
PstI	CTGCAG	2 cut(s)	283, 531
PsuI	RGATCY	2 cut(s)	472, 837
PvuII	CAGCTG	1 cut(s)	1073
RsaI	GTAC	3 cut(s)	681, 1069, 1157
RsaNI	GTAC	3 cut(s)	680, 1068, 1156
RseI	CAYNNNNRTG	1 cut(s)	1016
SaqAI	TTAA	4 cut(s)	150, 353, 498, 981
SatI	GCNGC	5 cut(s)	274, 509, 527, 1122, 1125
Sau3AI	GATC	6 cut(s)	337, 472, 837, 1324, 1378, 1473
Sau96I	GGNCC	7 cut(s)	253, 275, 360, 432, 1025, 1026, 1221
SbfI	CCTGCAGG	1 cut(s)	283
SchI	GAGTC	1 cut(s)	1108
ScrFI	CCNGG	5 cut(s)	430, 705, 915, 938, 1034
SdaI	CCTGCAGG	1 cut(s)	283
SduI	GDGCHC	4 cut(s)	169, 321, 1029, 1041
SexAI	ACCWGGT	1 cut(s)	428
SfaNI	GCATC	3 cut(s)	643, 662, 1093
SfcI	CTRYAG	3 cut(s)	133, 279, 527
Sfr274I	CTCGAG	2 cut(s)	41, 206
SinI	GGWCC	2 cut(s)	253, 432
SlaI	CTCGAG	2 cut(s)	41, 206
SmiMI	CAYNNNNRTG	1 cut(s)	1016
SmlI	CTYRAG	4 cut(s)	41, 206, 512, 1277
SmoI	CTYRAG	4 cut(s)	41, 206, 512, 1277
Sse8387I	CCTGCAGG	1 cut(s)	283
Sse9I	AATT	4 cut(s)	85, 367, 630, 1059
SsiI	CCGC	3 cut(s)	273, 290, 1023
SspMI	CTAG	6 cut(s)	156, 902, 954, 968, 1328, 1425
StyD4I	CCNGG	5 cut(s)	428, 703, 913, 936, 1032
StyI	CCWWGG	3 cut(s)	399, 967, 1159
TaaI	ACNGT	3 cut(s)	684, 1368, 1404
TaqI	TCGA	6 cut(s)	42, 112, 207, 332, 420, 1363
TasI	AATT	4 cut(s)	85, 367, 630, 1059
TatI	WGTACW	1 cut(s)	679
TauI	GCSGC	1 cut(s)	276
TfiI	GAWTC	3 cut(s)	202, 791, 1350
Tru1I	TTAA	4 cut(s)	150, 353, 498, 981
Tru9I	TTAA	4 cut(s)	150, 353, 498, 981
TscAI	CASTG	1 cut(s)	1407
TseFI	GTSAC	1 cut(s)	625
TseI	GCWGC	4 cut(s)	508, 526, 1121, 1124
Tsp45I	GTSAC	1 cut(s)	625
TspDTI	ATGAA	8 cut(s)	50, 439, 471, 548, 766, 858, 941, 1203
TspGWI	ACGGA	1 cut(s)	313
TspRI	CASTG	1 cut(s)	1407
Van91I	CCANNNNNTGG	1 cut(s)	62
VpaK11BI	GGWCC	2 cut(s)	253, 432
XagI	CCTNNNNNAGG	1 cut(s)	1092
XbaI	TCTAGA	1 cut(s)	1327
XceI	RCATGY	1 cut(s)	1267
XcmI	CCANNNNNNNNNTGG	1 cut(s)	719
XhoI	CTCGAG	2 cut(s)	41, 206
XmaJI	CCTAGG	1 cut(s)	967
XmnI	GAANNNNTTC	1 cut(s)	1177
XspI	CTAG	6 cut(s)	156, 902, 954, 968, 1328, 1425
Zsp2I	ATGCAT	2 cut(s)	539, 1318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.