Rroxscaffold_3G00237740

DnaJ homolog subfamily B member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0015884
Physical Location & Seq
Reverse (-)
25436209 .. 25439166
2958 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00237740.1

Sequence Viewer

Length: 1479 bp
ATGGATGGCGATGTCGCCGAGCGTAGCCGGGTCCTTCTCTCGGTAGGTGGCCTTGATGAGGTCAATGTCGAAGAAGTCGGTATGGCTCGGGTTGGAGGTGATCTTATGCGAAGACACCGGAGAATCTGCCTTTGGTTGATCGAAATCGGGTTTCGCCGTTCGAACTCGGTTTGTGATGCTAACGGTGGTGTTGCAGGGAGGCAAAGGAGTCTCAAGACAATCGCGCTCGTGAGTACCACAATTGAGTGCCTTGGTGAGCAGTGTGTTTTAGGTGGGATGAATTTAGTTTTGATTGGTCTACCAATTCCTTGCATACCCGAATTGCAGATACCGATGATTTGCTCTACAAATCTCAACGTCATGACAATGGTGCTATTGTTGGAGAAAGATGAGAATGATTTTATAATTAGTTATCCATCAACACCAATAGGTGGTTTGAATCATACGCACAGCATTGATGATAGCTTACTCATGCGTCGAACTCTTTCGAGGAATAAAAGTAGCAGAAGATGCAAGACCCCTACGCCAAGGTCCTTCTCAAGAAGTATGAGCCGGAGCACCACCCCGAATTCATTATCGAGCATTTCAAGTCGTAGGAACCCCTCCGAGACCGATATCCTTGCCTCTATAACAAGAAATCTAAGTCGGGAGGCCGAAATTGCTGCCTCTATATCAAGGAATATAAGTAGGAATATGAGCAGCAATAAAAGCCGCAATTTGAGCAGGAATGCGAGCAGCAGACACCCATCTGAGTCGGAATTACCCTCTCCATCACCTGCATCTCCACCGCCCGCCTCTCCAACACCGGCCTCACCTTCACCTGCCGCCTCTCCATCTACAGCTCGATCGCCTCATACCAGTAAAACAACAGGCACATCTGAAACGGACCCTACCACACCTCTATCAAGAACTCCGAGCAGGCGGAGCACCACCCCCATTGTGTTCTCTCAGACAACTGCTAGAAGGAAACCTCCCCGGTTGAGAAGAAGCTTGAATTCACACTCGAGGAGTTGTGTCATGGATGCGATTATTGTGAAAGAAGAGGAAGTACTGAAAATAAACGTGCAGCCAGGATGGAGGAAAGGAACCAAGATTACATTCGAAGGGAAAGGGGATGAGAAACCAGGGTACCTTCCAGCCGATATCATCTTCTTGATAGATGAAAAGAGGCATCATTTGTTCAAAAGAGCAGGCCGGGACGATTTGGAAATCGCTGTTGAGATTCCACTGGCGGATGCATTGGGAGGCTGCTCCTTTCCAGCTCCTTTGTTAGGAGGTGAAACAATAAGTCTGTCATTTGACGAGATTATACATCATGGTTATGAAAAGGTCATTGAAGGACAAGGAATGCCAAAGCTTAAAGAACCAACAAAGAGAGGTGACCTCCGCATTACTTGTCTCGTTAATTTTCCGAAAAAATTGAGCGACGAGCAACGAGCAGAAGCTGTTTCAATTTTACAAGAATGTTCTTATCAGTAA

Protein Analysis

492

Amino Acids

53.87

Weight (kDa)

9.33

Isoelectric Point (pI)

77.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ_C PF01556 311 - 471 2e-27 DnaJ C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015884)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11040
fragaria_vesca FvH4_5g29110
malus_domestica MD08G1235600.v1.1 MD15G1427300.v1.1
prunus_persica Prupe.1G571300_v2.0.a1
pyrus_communis pycom15g37880
rosa_chinensis RchiOBHm_Chr7g0221771
rosa_laevigata RLG00000002125
rosa_roxburghii Rroxscaffold_3G00237740
rosa_rugosa Rorug07G0203200
rosa_samantha Rh7AG344100 Rh7BG334800 Rh7CG361500 Rh7DG341900
rosa_wichuraiana Rw7G029180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 404
AarI CACCTGC 2 cut(s) 784, 829
Acc36I ACCTGC 2 cut(s) 784, 829
Acc65I GGTACC 1 cut(s) 1128
AccB1I GGYRCC 1 cut(s) 1128
AccB7I CCANNNNNTGG 1 cut(s) 431
AccI GTMKAC 1 cut(s) 298
AccII CGCG 1 cut(s) 224
AciI CCGC 7 cut(s) 712, 788, 792, 825, 922, 1232, 1387
AcsI RAATTY 3 cut(s) 280, 568, 994
AfaI GTAC 3 cut(s) 235, 1050, 1130
AfiI CCNNNNNNNGG 4 cut(s) 40, 58, 431, 1271
AgsI TTSAA 6 cut(s) 439, 588, 994, 1183, 1337, 1452
AjnI CCWGG 2 cut(s) 1069, 1123
AjuI GAANNNNNNNTTGG 4 cut(s) 115, 147, 1082, 1114
AluBI AGCT 6 cut(s) 465, 842, 990, 1262, 1357, 1445
AluI AGCT 6 cut(s) 465, 842, 990, 1262, 1357, 1445
Alw21I GWGCWC 2 cut(s) 560, 929
Alw26I GTCTC 3 cut(s) 215, 602, 1403
AlwNI CAGNNNCTG 1 cut(s) 1445
Ama87I CYCGRG 2 cut(s) 87, 1003
AoxI GGCC 4 cut(s) 49, 651, 807, 1192
ApeKI GCWGC 5 cut(s) 662, 699, 735, 1066, 1248
ApoI RAATTY 3 cut(s) 280, 568, 994
Asp700I GAANNNNTTC 1 cut(s) 484
Asp718I GGTACC 1 cut(s) 1128
AspLEI GCGC 1 cut(s) 226
AspS9I GGNCC 3 cut(s) 31, 531, 886
AsuC2I CCSGG 3 cut(s) 29, 976, 1196
AsuHPI GGTGA 7 cut(s) 110, 266, 765, 804, 810, 1289, 1391
AsuII TTCGAA 2 cut(s) 161, 1101
AvaI CYCGRG 2 cut(s) 87, 1003
AvaII GGWCC 3 cut(s) 31, 531, 886
BaeI ACNNNNGTAYC 2 cut(s) 1112, 1145
BanI GGYRCC 1 cut(s) 1128
BarI GAAGNNNNNNTAC 2 cut(s) 1032, 1064
BauI CACGAG 1 cut(s) 227
BbsI GAAGAC 1 cut(s) 118
Bbv12I GWGCWC 2 cut(s) 560, 929
BbvI GCAGC 5 cut(s) 649, 711, 747, 1078, 1235
BccI CCATC 5 cut(s) 424, 754, 778, 841, 1068
BceAI ACGGC 1 cut(s) 141
BcgI CGANNNNNNTGC 4 cut(s) 602, 636, 644, 678
BciT130I CCWGG 2 cut(s) 1071, 1125
BcnI CCSGG 3 cut(s) 29, 976, 1196
BcoDI GTCTC 3 cut(s) 215, 602, 1403
BfaI CTAG 1 cut(s) 960
BfmI CTRYAG 1 cut(s) 837
BfuAI ACCTGC 2 cut(s) 784, 829
BisI GCNGC 7 cut(s) 663, 700, 712, 736, 825, 1067, 1249
BlsI GCNGC 7 cut(s) 664, 701, 713, 737, 826, 1068, 1250
BmcAI AGTACT 1 cut(s) 1050
Bme1390I CCNGG 5 cut(s) 29, 976, 1071, 1125, 1196
Bme18I GGWCC 3 cut(s) 31, 531, 886
BmeT110I CYCGRG 2 cut(s) 87, 1003
BmgT120I GGNCC 3 cut(s) 31, 531, 886
BmiI GGNNCC 5 cut(s) 32, 599, 888, 1087, 1130
BmrFI CCNGG 5 cut(s) 29, 976, 1071, 1125, 1196
BmsI GCATC 6 cut(s) 166, 500, 788, 1012, 1180, 1225
BpiI GAAGAC 1 cut(s) 118
BplI GAGNNNNNCTC 2 cut(s) 1368, 1400
Bpu14I TTCGAA 2 cut(s) 161, 1101
BpuEI CTTGAG 2 cut(s) 197, 523
BpuMI CCSGG 3 cut(s) 29, 976, 1196
BsaBI GATNNNNATC 1 cut(s) 143
BsaI GGTCTC 1 cut(s) 602
BsaJI CCNNGG 4 cut(s) 250, 527, 974, 1124
BsaWI WCCGGW 1 cut(s) 117
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 58, 431, 1271
Bse118I RCCGGY 1 cut(s) 805
Bse1I ACTGG 2 cut(s) 858, 1233
Bse8I GATNNNNATC 1 cut(s) 143
BseBI CCWGG 2 cut(s) 1071, 1125
BseDI CCNNGG 4 cut(s) 250, 527, 974, 1124
BseGI GGATG 6 cut(s) 10, 282, 1027, 1079, 1120, 1240
BseJI GATNNNNATC 1 cut(s) 143
BseLI CCNNNNNNNGG 4 cut(s) 40, 58, 431, 1271
BseMII CTCAG 2 cut(s) 741, 962
BseNI ACTGG 2 cut(s) 858, 1233
BseRI GAGGAG 1 cut(s) 1021
BseXI GCAGC 5 cut(s) 649, 711, 747, 1078, 1235
BsgI GTGCAG 1 cut(s) 1085
Bsh1236I CGCG 1 cut(s) 224
Bsh1285I CGRYCG 1 cut(s) 848
BshFI GGCC 4 cut(s) 51, 653, 809, 1194
BshNI GGYRCC 1 cut(s) 1128
BsiEI CGRYCG 1 cut(s) 848
BsiHKAI GWGCWC 2 cut(s) 560, 929
BsiHKCI CYCGRG 2 cut(s) 87, 1003
BsiSI CCGG 6 cut(s) 28, 118, 553, 806, 976, 1195
BslFI GGGAC 1 cut(s) 1211
BslI CCNNNNNNNGG 4 cut(s) 40, 58, 431, 1271
BsmAI GTCTC 3 cut(s) 215, 602, 1403
BsmFI GGGAC 1 cut(s) 1211
BsmI GAATGC 2 cut(s) 733, 1353
BsnI GGCC 4 cut(s) 51, 653, 809, 1194
Bso31I GGTCTC 1 cut(s) 602
BsoBI CYCGRG 2 cut(s) 87, 1003
Bsp119I TTCGAA 2 cut(s) 161, 1101
Bsp1286I GDGCHC 2 cut(s) 560, 929
Bsp143I GATC 3 cut(s) 100, 138, 845
BspACI CCGC 7 cut(s) 712, 788, 792, 825, 922, 1232, 1387
BspANI GGCC 4 cut(s) 51, 653, 809, 1194
BspCNI CTCAG 2 cut(s) 742, 961
BspFNI CGCG 1 cut(s) 224
BspHI TCATGA 1 cut(s) 360
BspLI GGNNCC 5 cut(s) 32, 599, 888, 1087, 1130
BspMI ACCTGC 2 cut(s) 784, 829
BspT104I TTCGAA 2 cut(s) 161, 1101
BspT107I GGYRCC 1 cut(s) 1128
BspTNI GGTCTC 1 cut(s) 602
BsrFI RCCGGY 1 cut(s) 805
BsrI ACTGG 2 cut(s) 858, 1233
BssAI RCCGGY 1 cut(s) 805
BssECI CCNNGG 4 cut(s) 250, 527, 974, 1124
BssMI GATC 3 cut(s) 100, 138, 845
BssSI CACGAG 1 cut(s) 227
BssT1I CCWWGG 2 cut(s) 250, 527
Bst2BI CACGAG 1 cut(s) 227
Bst2UI CCWGG 2 cut(s) 1071, 1125
Bst4CI ACNGT 1 cut(s) 185
Bst6I CTCTTC 1 cut(s) 1035
BstAPI GCANNNNNTGC 1 cut(s) 510
BstBI TTCGAA 2 cut(s) 161, 1101
BstC8I GCNNGC 4 cut(s) 733, 792, 920, 1192
BstDEI CTNAG 3 cut(s) 641, 750, 948
BstEII GGTNACC 1 cut(s) 1379
BstENI CCTNNNNNAGG 2 cut(s) 56, 1269
BstF5I GGATG 6 cut(s) 10, 282, 1027, 1079, 1120, 1240
BstFNI CGCG 1 cut(s) 224
BstHHI GCGC 1 cut(s) 226
BstKTI GATC 3 cut(s) 103, 141, 848
BstMAI GTCTC 3 cut(s) 215, 602, 1403
BstMBI GATC 3 cut(s) 100, 138, 845
BstMCI CGRYCG 1 cut(s) 848
BstMWI GCNNNNNNNGC 5 cut(s) 510, 659, 708, 720, 924
BstNI CCWGG 2 cut(s) 1071, 1125
BstPI GGTNACC 1 cut(s) 1379
BstSCI CCNGG 5 cut(s) 27, 974, 1069, 1123, 1194
BstSFI CTRYAG 1 cut(s) 837
BstUI CGCG 1 cut(s) 224
BstV1I GCAGC 5 cut(s) 649, 711, 747, 1078, 1235
BstV2I GAAGAC 1 cut(s) 118
BsuRI GGCC 4 cut(s) 51, 653, 809, 1194
BtgZI GCGATG 1 cut(s) 24
BtsCI GGATG 6 cut(s) 10, 282, 1027, 1079, 1120, 1240
BtsI GCAGTG 1 cut(s) 266
BtsIMutI CAGTG 2 cut(s) 266, 1226
BveI ACCTGC 2 cut(s) 784, 829
Cac8I GCNNGC 4 cut(s) 733, 792, 920, 1192
CaiI CAGNNNCTG 1 cut(s) 1445
CciI TCATGA 1 cut(s) 360
CfoI GCGC 1 cut(s) 226
Cfr10I RCCGGY 1 cut(s) 805
Cfr13I GGNCC 3 cut(s) 31, 531, 886
CseI GACGC 1 cut(s) 464
Csp6I GTAC 3 cut(s) 234, 1049, 1129
CspCI CAANNNNNGTGG 2 cut(s) 919, 954
CviAII CATG 4 cut(s) 361, 472, 1018, 1316
CviQI GTAC 3 cut(s) 234, 1049, 1129
DdeI CTNAG 3 cut(s) 641, 750, 948
DpnI GATC 3 cut(s) 102, 140, 847
DpnII GATC 3 cut(s) 100, 138, 845
Eam1104I CTCTTC 1 cut(s) 1035
EarI CTCTTC 1 cut(s) 1035
EciI GGCGGA 2 cut(s) 937, 1247
Eco130I CCWWGG 2 cut(s) 250, 527
Eco31I GGTCTC 1 cut(s) 602
Eco32I GATATC 2 cut(s) 616, 1144
Eco47I GGWCC 3 cut(s) 31, 531, 886
Eco88I CYCGRG 2 cut(s) 87, 1003
Eco91I GGTNACC 1 cut(s) 1379
EcoNI CCTNNNNNAGG 2 cut(s) 56, 1269
EcoO109I RGGNCCY 2 cut(s) 31, 531
EcoO65I GGTNACC 1 cut(s) 1379
EcoRI GAATTC 2 cut(s) 568, 994
EcoRII CCWGG 2 cut(s) 1069, 1123
EcoRV GATATC 2 cut(s) 616, 1144
EcoT14I CCWWGG 2 cut(s) 250, 527
EcoT22I ATGCAT 1 cut(s) 1240
ErhI CCWWGG 2 cut(s) 250, 527
FaeI CATG 4 cut(s) 364, 475, 1021, 1319
FaqI GGGAC 1 cut(s) 1211
FatI CATG 4 cut(s) 360, 471, 1017, 1315
FauI CCCGC 1 cut(s) 799
FblI GTMKAC 1 cut(s) 298
Fnu4HI GCNGC 7 cut(s) 663, 700, 712, 736, 825, 1067, 1249
FokI GGATG 6 cut(s) 17, 289, 1034, 1086, 1127, 1247
Fsp4HI GCNGC 7 cut(s) 663, 700, 712, 736, 825, 1067, 1249
FspBI CTAG 1 cut(s) 960
GlaI GCGC 1 cut(s) 225
GluI GCNGC 7 cut(s) 663, 700, 712, 736, 825, 1067, 1249
HaeIII GGCC 4 cut(s) 51, 653, 809, 1194
HapII CCGG 6 cut(s) 28, 118, 553, 806, 976, 1195
HgaI GACGC 1 cut(s) 464
HhaI GCGC 1 cut(s) 226
Hin1II CATG 4 cut(s) 364, 475, 1021, 1319
Hin6I GCGC 1 cut(s) 224
HinP1I GCGC 1 cut(s) 224
HindIII AAGCTT 2 cut(s) 988, 1355
HinfI GANTC 5 cut(s) 123, 208, 439, 752, 1222
HpaII CCGG 6 cut(s) 28, 118, 553, 806, 976, 1195
HphI GGTGA 7 cut(s) 110, 266, 765, 804, 810, 1289, 1391
Hpy166II GTNNAC 1 cut(s) 299
Hpy188I TCNGA 7 cut(s) 607, 751, 757, 880, 915, 951, 1413
Hpy188III TCNNGA 7 cut(s) 214, 229, 361, 540, 647, 906, 1153
Hpy8I GTNNAC 1 cut(s) 299
Hpy99I CGWCG 2 cut(s) 480, 1430
HpyAV CCTTC 7 cut(s) 44, 544, 825, 957, 1097, 1142, 1331
HpyCH4III ACNGT 1 cut(s) 185
HpyCH4IV ACGT 2 cut(s) 357, 1062
HpyCH4V TGCA 7 cut(s) 194, 312, 325, 513, 779, 1066, 1238
HpyF10VI GCNNNNNNNGC 5 cut(s) 510, 659, 708, 720, 924
HpyF3I CTNAG 3 cut(s) 641, 750, 948
HpySE526I ACGT 2 cut(s) 357, 1062
Hsp92II CATG 4 cut(s) 364, 475, 1021, 1319
HspAI GCGC 1 cut(s) 224
KpnI GGTACC 1 cut(s) 1132
Kzo9I GATC 3 cut(s) 100, 138, 845
LmnI GCTCC 4 cut(s) 555, 924, 1256, 1267
Lsp1109I GCAGC 5 cut(s) 649, 711, 747, 1078, 1235
LweI GCATC 6 cut(s) 166, 500, 788, 1012, 1180, 1225
MaeI CTAG 1 cut(s) 960
MaeII ACGT 2 cut(s) 357, 1062
MaeIII GTNAC 1 cut(s) 1379
MalI GATC 3 cut(s) 102, 140, 847
MboI GATC 3 cut(s) 100, 138, 845
MboII GAAGA 6 cut(s) 83, 123, 519, 996, 1052, 1141
MfeI CAATTG 1 cut(s) 240
MhlI GDGCHC 2 cut(s) 560, 929
MlyI GAGTC 2 cut(s) 217, 761
MmeI TCCRAC 4 cut(s) 73, 360, 735, 824
Mph1103I ATGCAT 1 cut(s) 1240
MroXI GAANNNNTTC 1 cut(s) 484
MseI TTAA 2 cut(s) 1359, 1404
MslI CAYNNNNRTG 2 cut(s) 365, 1320
MspI CCGG 6 cut(s) 28, 118, 553, 806, 976, 1195
MspR9I CCNGG 5 cut(s) 29, 976, 1071, 1125, 1196
MunI CAATTG 1 cut(s) 240
Mva1269I GAATGC 2 cut(s) 733, 1353
MvaI CCWGG 2 cut(s) 1071, 1125
MvnI CGCG 1 cut(s) 224
MwoI GCNNNNNNNGC 5 cut(s) 510, 659, 708, 720, 924
NciI CCSGG 3 cut(s) 29, 976, 1196
NdeII GATC 3 cut(s) 100, 138, 845
NlaIII CATG 4 cut(s) 364, 475, 1021, 1319
NlaIV GGNNCC 5 cut(s) 32, 599, 888, 1087, 1130
NmeAIII GCCGAG 1 cut(s) 43
NmuCI GTSAC 1 cut(s) 1379
NsiI ATGCAT 1 cut(s) 1240
NspV TTCGAA 2 cut(s) 161, 1101
PaeR7I CTCGAG 1 cut(s) 1003
PagI TCATGA 1 cut(s) 360
PaqCI CACCTGC 2 cut(s) 784, 829
PctI GAATGC 2 cut(s) 733, 1353
PdmI GAANNNNTTC 1 cut(s) 484
PfeI GAWTC 3 cut(s) 123, 439, 1222
PflMI CCANNNNNTGG 1 cut(s) 431
PkrI GCNGC 7 cut(s) 664, 701, 713, 737, 826, 1068, 1250
Ple19I CGATCG 1 cut(s) 848
PleI GAGTC 2 cut(s) 216, 760
PpsI GAGTC 2 cut(s) 216, 760
PpuMI RGGWCCY 2 cut(s) 31, 531
PsiI TTATAA 1 cut(s) 404
Psp5II RGGWCCY 2 cut(s) 31, 531
Psp6I CCWGG 2 cut(s) 1069, 1123
PspEI GGTNACC 1 cut(s) 1379
PspGI CCWGG 2 cut(s) 1069, 1123
PspN4I GGNNCC 5 cut(s) 32, 599, 888, 1087, 1130
PspPI GGNCC 3 cut(s) 31, 531, 886
PspPPI RGGWCCY 2 cut(s) 31, 531
PspXI VCTCGAGB 1 cut(s) 1003
PsrI GAACNNNNNNTAC 2 cut(s) 1078, 1110
PstNI CAGNNNCTG 1 cut(s) 1445
PvuI CGATCG 1 cut(s) 848
RsaI GTAC 3 cut(s) 235, 1050, 1130
RsaNI GTAC 3 cut(s) 234, 1049, 1129
RseI CAYNNNNRTG 2 cut(s) 365, 1320
SaqAI TTAA 2 cut(s) 1359, 1404
SatI GCNGC 7 cut(s) 663, 700, 712, 736, 825, 1067, 1249
Sau3AI GATC 3 cut(s) 100, 138, 845
Sau96I GGNCC 3 cut(s) 31, 531, 886
ScaI AGTACT 1 cut(s) 1050
SchI GAGTC 2 cut(s) 217, 761
ScrFI CCNGG 5 cut(s) 29, 976, 1071, 1125, 1196
SduI GDGCHC 2 cut(s) 560, 929
SfaNI GCATC 6 cut(s) 166, 500, 788, 1012, 1180, 1225
SfcI CTRYAG 1 cut(s) 837
Sfr274I CTCGAG 1 cut(s) 1003
SfuI TTCGAA 2 cut(s) 161, 1101
SinI GGWCC 3 cut(s) 31, 531, 886
SlaI CTCGAG 1 cut(s) 1003
SmiMI CAYNNNNRTG 2 cut(s) 365, 1320
SmlI CTYRAG 3 cut(s) 212, 538, 1003
SmoI CTYRAG 3 cut(s) 212, 538, 1003
SsiI CCGC 7 cut(s) 712, 788, 792, 825, 922, 1232, 1387
SspMI CTAG 1 cut(s) 960
StyD4I CCNGG 5 cut(s) 27, 974, 1069, 1123, 1194
StyI CCWWGG 2 cut(s) 250, 527
TaaI ACNGT 1 cut(s) 185
TaiI ACGT 2 cut(s) 360, 1065
TaqI TCGA 9 cut(s) 69, 141, 161, 478, 488, 578, 844, 1004, 1101
TaqII GACCGA 1 cut(s) 626
TatI WGTACW 1 cut(s) 1048
TauI GCSGC 2 cut(s) 714, 827
TfiI GAWTC 3 cut(s) 123, 439, 1222
Tru1I TTAA 2 cut(s) 1359, 1404
Tru9I TTAA 2 cut(s) 1359, 1404
TscAI CASTG 2 cut(s) 266, 1233
TseFI GTSAC 1 cut(s) 1379
TseI GCWGC 5 cut(s) 662, 699, 735, 1066, 1248
Tsp45I GTSAC 1 cut(s) 1379
TspDTI ATGAA 4 cut(s) 293, 561, 1176, 1338
TspGWI ACGGA 1 cut(s) 899
TspRI CASTG 2 cut(s) 266, 1233
Van91I CCANNNNNTGG 1 cut(s) 431
VpaK11BI GGWCC 3 cut(s) 31, 531, 886
XagI CCTNNNNNAGG 2 cut(s) 56, 1269
XapI RAATTY 3 cut(s) 280, 568, 994
XhoI CTCGAG 1 cut(s) 1003
XmiI GTMKAC 1 cut(s) 298
XmnI GAANNNNTTC 1 cut(s) 484
XspI CTAG 1 cut(s) 960
ZrmI AGTACT 1 cut(s) 1050
Zsp2I ATGCAT 1 cut(s) 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.