Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005410

Physical Location & Seq

Genomic Coordinates Forward (+)

29014215 .. 29020625

Gene Structure 6411 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00239200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGAAGCGGAAGCGTGGGCACAAGAACAAGAAAGGAAAGCCTAAAGGTCCTTCTGTGCCGGTTGTTGTAAATTTGGAGGAGAACGAAAATTTGGATGAGTCTGGGGGCGGCGGTGGCGGTGGCGATAATGATGATAATATAGATGATTCTGGAATGGAGGTTGATACCCCTTCTTCAACGGGGACGGATCAGCAGCACCAGCACCAGCACTACAATGTTGCCAATATTAATCCCGATGGTTCAATTGGTAGGGGGGCAGGGAAATCAGTGGGGAGAGTTAAAGTGAAGCTTGTGACTCCCAAAACAAAGGAATCTCAGCTTACTTCTTCTGAGGCATACACACAAAGTGATACAGATAAGAGTAGTCAACAAATGGGTTTGGAAAGACAAGGTGTGCTGTCTGAGAAAATGGAGGACAGCGCAAATTCATTGTCTAAAATGAAATCTGGCAATGTGTCAAAGAAAGCTGGGAGTATAAAGATTAAACCATCCAAGTCACTTGGGTCAAGTATTAGCCATAGTGATCCTGTACCCGCACGGAGTGAGAGTCCACATGAAAAAGAACTACACAGGCCTCATCTGGAATCTCGATACAATAAGCAAGAGTTAGATACTGCACTCACGGTTATAAAGAAGGTAATGAAAATGGATGCTGCGGAACCTTTTAATGTCCCTGTCAATCCTGAAGCTTTAGGAATACCTGATTATTTTGATGTGATAGATACACCAATGGACTTTGGAACAATATGCAGCAACCTTGAACTGGGTGTTAAATATAGAAATTCTGAGGATGTATACAAAGATGTTCAGTATATTTGGGACAACTGTTATAAGTATAACAATAAGGGCGACTACATTTTGGATCTTATGAGGCGGGTGAAGAAGAATTTTGCAAAGTATTGGACAGCAGCTGGGTTATATAGTGGACAGTCGACGGGAACTAGTGGTGTTGAAAGCAGTCAAGAAAATATCTCACCATCTGATCAAGGGAAAGTACATATGAAAGGTGGCCAAATAAAACAGAAGACACGAAAGGGTCATGGAAGGCGTCACAAATCCGATTGCTTATGTGCTATTTGTGTTCTAAAACGCCGTAGAAGGGAGCGTGAGGAGAATGCTCATATTGTTAAAAGCCCACTTGGAGCTAGTGATAATAATCTTTCCCAGGAGTTCAGGCAAGAGGAATCTTCACATGCGGAGAGTCCTTCTGGTGAAAATTCATCTTCAGATATGGATGGATCATTGGACCCGAATGCAGATGCTACGGTGGAAGAAACAGAAGAGGTGAAAATGGGGGTATCCAAGCAGCAGTTTGATTGCCCATCAAGGGAGAAGCAGGAGGAGGAGGAGGATGACGATGAAGAGGATGAGGAGGAAGAGAGTGAGATGGAGATGAAAGATGAAGGTAATGGTGAGGGACTACAGCAGCTTGACAAATCAAGAGAGGAGCCTAATGAACAATTGCAACCAATGATAACTGAAAAGCTTGATGCTGGGATGCAAACTGGTGCAAAAATGAATACTTTGGCGCAGCATGAAGGAGGAATCGAAGCAGATAATAAAGAGAAGGAAGCGCAAGAAATACATAAGAAAGTAAAGGCATCTGAAAACTTGCAATTTGAAAATCCCATGCTTGTGGATCTATGCGGGATTCTCTTCCCCAAGAATAGCAAGTCTATCTGGAGTGGACCTCATTCACTTGTTCAGCATCGCACTTCTCATACTAGCTCAATTCATGCAGTTATTAACATGCTTATGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001047 GO:0001067 GO:0001085 GO:0001091 GO:0001094 GO:0001098 GO:0001099 GO:0001672 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008134 GO:0008150 GO:0010639 GO:0010847 GO:0031445 GO:0031452 GO:0033043 GO:0033044 GO:0042393 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044087 GO:0044212 GO:0044424 GO:0044464 GO:0045798 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0065007 GO:0070577 GO:0097159 GO:0140030 GO:0140033 GO:1901363 GO:1902275 GO:1905268 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

587

Amino Acids

65.05

Weight (kDa)

5.48

Isoelectric Point (pI)

57.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	208 - 286	5.7e-17	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58025 AT1G58025 AT1G58025 AT1G58025 AT1G58025 AT1G58025
fragaria_vesca	FvH4_5g28621 FvH4_5g28621
malus_domestica	MD08G1241300.v1.1 MD15G1435300.v1.1
prunus_persica	Prupe.1G578900_v2.0.a1
pyrus_communis	pycom08g20910 pycom08g20920 pycom15g38390 pycom15g38400
rosa_chinensis	RchiOBHm_Chr7g0220691
rosa_multiflora	Rmu_ssc0000189.1_g000001
rosa_roxburghii	Rroxscaffold_2G00113660 Rroxscaffold_3G00239200 Rroxscaffold_4G00318920 Rroxscaffold_4G00321600
rosa_rugosa	Rorug07G0196200 Rorug07G0196200 Rorug07G0196200
rosa_samantha	Rh7AG337000 Rh7BG327900 Rh7CG355000 Rh7DG333600
rosa_wichuraiana	Rw7G028750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	629, 831
AccI	GTMKAC	2 cut(s)	795, 932
AciI	CCGC	9 cut(s)	7, 108, 111, 117, 534, 656, 874, 1196, 1647
AclWI	GGATC	5 cut(s)	195, 518, 870, 1246, 1647
AcoI	YGGCCR	1 cut(s)	1009
AcsI	RAATTY	6 cut(s)	70, 88, 424, 781, 886, 1216
AcuI	CTGAAG	2 cut(s)	705, 1209
AcyI	GRCGYC	1 cut(s)	1048
AdeI	CACNNNGTG	2 cut(s)	347, 542
AfaI	GTAC	2 cut(s)	531, 996
AfiI	CCNNNNNNNGG	3 cut(s)	763, 1099, 1327
AgsI	TTSAA	5 cut(s)	177, 243, 761, 953, 1622
AhlI	ACTAGT	1 cut(s)	941
AjnI	CCWGG	1 cut(s)	1164
AjuI	GAANNNNNNNTTGG	2 cut(s)	74, 106
AluBI	AGCT	9 cut(s)	289, 319, 467, 689, 911, 1145, 1429, 1486, 1728
AluI	AGCT	9 cut(s)	289, 319, 467, 689, 911, 1145, 1429, 1486, 1728
AlwI	GGATC	5 cut(s)	195, 518, 870, 1246, 1647
AlwNI	CAGNNNCTG	1 cut(s)	911
AoxI	GGCC	2 cut(s)	572, 1009
ApeKI	GCWGC	7 cut(s)	193, 653, 750, 908, 1306, 1426, 1531
ApoI	RAATTY	6 cut(s)	70, 88, 424, 781, 886, 1216
ArsI	GACNNNNNNTTYG	2 cut(s)	416, 448
AseI	ATTAAT	1 cut(s)	228
AspLEI	GCGC	3 cut(s)	422, 1531, 1576
AspS9I	GGNCC	3 cut(s)	47, 1246, 1688
AsuHPI	GGTGA	5 cut(s)	889, 966, 1223, 1297, 1424
AvaII	GGWCC	3 cut(s)	47, 1246, 1688
BaeGI	GKGCMC	1 cut(s)	21
BalI	TGGCCA	1 cut(s)	1011
BbsI	GAAGAC	1 cut(s)	1031
BbvI	GCAGC	7 cut(s)	205, 640, 762, 920, 1318, 1438, 1543
BccI	CCATC	6 cut(s)	230, 496, 985, 1229, 1330, 1381
BceAI	ACGGC	1 cut(s)	1077
BciT130I	CCWGG	1 cut(s)	1166
BciVI	GTATCC	1 cut(s)	1309
BclI	TGATCA	1 cut(s)	982
BcuI	ACTAGT	1 cut(s)	941
BfaI	CTAG	3 cut(s)	942, 1146, 1725
BfmI	CTRYAG	1 cut(s)	1421
BfuI	GTATCC	1 cut(s)	1309
BisI	GCNGC	8 cut(s)	109, 194, 654, 751, 909, 1307, 1427, 1532
BlsI	GCNGC	8 cut(s)	110, 195, 655, 752, 910, 1308, 1428, 1533
Bme1390I	CCNGG	1 cut(s)	1166
Bme18I	GGWCC	3 cut(s)	47, 1246, 1688
BmgT120I	GGNCC	3 cut(s)	47, 1246, 1688
BmiI	GGNNCC	3 cut(s)	660, 1248, 1449
BmrFI	CCNGG	1 cut(s)	1166
BmrI	ACTGGG	1 cut(s)	773
BmsI	GCATC	6 cut(s)	640, 1249, 1480, 1488, 1610, 1717
BmuI	ACTGGG	1 cut(s)	773
BpiI	GAAGAC	1 cut(s)	1031
BplI	GAGNNNNNCTC	2 cut(s)	1675, 1707
BpmI	CTGGAG	1 cut(s)	1702
BsaBI	GATNNNNATC	1 cut(s)	1155
BsaHI	GRCGYC	1 cut(s)	1048
BsaJI	CCNNGG	1 cut(s)	1164
BsaXI	ACNNNNNCTCC	2 cut(s)	532, 562
Bsc4I	CCNNNNNNNGG	3 cut(s)	763, 1099, 1327
Bse118I	RCCGGY	1 cut(s)	58
Bse1I	ACTGG	2 cut(s)	768, 1510
Bse3DI	GCAATG	1 cut(s)	457
Bse8I	GATNNNNATC	1 cut(s)	1155
BseBI	CCWGG	1 cut(s)	1166
BseDI	CCNNGG	1 cut(s)	1164
BseGI	GGATG	8 cut(s)	100, 488, 655, 796, 1240, 1357, 1372, 1503
BseJI	GATNNNNATC	1 cut(s)	1155
BseLI	CCNNNNNNNGG	3 cut(s)	763, 1099, 1327
BseMI	GCAATG	1 cut(s)	457
BseMII	CTCAG	4 cut(s)	321, 329, 393, 777
BseNI	ACTGG	2 cut(s)	768, 1510
BseRI	GAGGAG	7 cut(s)	92, 1124, 1355, 1358, 1361, 1385, 1460
BseSI	GKGCMC	1 cut(s)	21
BseXI	GCAGC	7 cut(s)	205, 640, 762, 920, 1318, 1438, 1543
BseYI	CCCAGC	3 cut(s)	467, 911, 1493
BsgI	GTGCAG	1 cut(s)	600
BshFI	GGCC	2 cut(s)	574, 1011
BsiSI	CCGG	1 cut(s)	59
BslFI	GGGAC	4 cut(s)	196, 656, 833, 1431
BslI	CCNNNNNNNGG	3 cut(s)	763, 1099, 1327
BsmFI	GGGAC	4 cut(s)	196, 656, 833, 1431
BsmI	GAATGC	2 cut(s)	1120, 1258
BsnI	GGCC	2 cut(s)	574, 1011
Bsp1286I	GDGCHC	1 cut(s)	21
Bsp143I	GATC	6 cut(s)	187, 523, 862, 982, 1238, 1639
BspACI	CCGC	9 cut(s)	7, 108, 111, 117, 534, 656, 874, 1196, 1647
BspANI	GGCC	2 cut(s)	574, 1011
BspCNI	CTCAG	4 cut(s)	322, 328, 394, 778
BspLI	GGNNCC	3 cut(s)	660, 1248, 1449
BspPI	GGATC	5 cut(s)	195, 518, 870, 1246, 1647
BsrDI	GCAATG	1 cut(s)	457
BsrFI	RCCGGY	1 cut(s)	58
BsrI	ACTGG	2 cut(s)	768, 1510
BssAI	RCCGGY	1 cut(s)	58
BssECI	CCNNGG	1 cut(s)	1164
BssMI	GATC	6 cut(s)	187, 523, 862, 982, 1238, 1639
BssNAI	GTATAC	1 cut(s)	796
BssNI	GRCGYC	1 cut(s)	1048
Bst1107I	GTATAC	1 cut(s)	796
Bst2UI	CCWGG	1 cut(s)	1166
Bst4CI	ACNGT	4 cut(s)	625, 827, 930, 1267
Bst6I	CTCTTC	4 cut(s)	1275, 1356, 1371, 1661
BstACI	GRCGYC	1 cut(s)	1048
BstDEI	CTNAG	4 cut(s)	315, 330, 402, 786
BstF5I	GGATG	8 cut(s)	100, 488, 655, 796, 1240, 1357, 1372, 1503
BstHHI	GCGC	3 cut(s)	422, 1531, 1576
BstKTI	GATC	6 cut(s)	190, 526, 865, 985, 1241, 1642
BstMBI	GATC	6 cut(s)	187, 523, 862, 982, 1238, 1639
BstMWI	GCNNNNNNNGC	2 cut(s)	114, 199
BstNI	CCWGG	1 cut(s)	1166
BstNSI	RCATGY	2 cut(s)	1196, 1753
BstSCI	CCNGG	1 cut(s)	1164
BstSFI	CTRYAG	1 cut(s)	1421
BstSLI	GKGCMC	1 cut(s)	21
BstV1I	GCAGC	7 cut(s)	205, 640, 762, 920, 1318, 1438, 1543
BstV2I	GAAGAC	1 cut(s)	1031
BstX2I	RGATCY	2 cut(s)	862, 1639
BstXI	CCANNNNNNTGG	1 cut(s)	1636
BstYI	RGATCY	2 cut(s)	862, 1639
BstZ17I	GTATAC	1 cut(s)	796
BsuI	GTATCC	1 cut(s)	1309
BsuRI	GGCC	2 cut(s)	574, 1011
BtgZI	GCGATG	1 cut(s)	1694
BtsCI	GGATG	8 cut(s)	100, 488, 655, 796, 1240, 1357, 1372, 1503
BtsIMutI	CAGTG	1 cut(s)	273
CaiI	CAGNNNCTG	1 cut(s)	911
CfoI	GCGC	3 cut(s)	422, 1531, 1576
Cfr10I	RCCGGY	1 cut(s)	58
Cfr13I	GGNCC	3 cut(s)	47, 1246, 1688
CseI	GACGC	1 cut(s)	1037
Csp6I	GTAC	2 cut(s)	530, 995
CviAII	CATG	7 cut(s)	554, 1040, 1193, 1535, 1630, 1736, 1750
CviQI	GTAC	2 cut(s)	530, 995
DdeI	CTNAG	4 cut(s)	315, 330, 402, 786
DpnI	GATC	6 cut(s)	189, 525, 864, 984, 1240, 1641
DpnII	GATC	6 cut(s)	187, 523, 862, 982, 1238, 1639
DraIII	CACNNNGTG	2 cut(s)	347, 542
EaeI	YGGCCR	1 cut(s)	1009
Eam1104I	CTCTTC	4 cut(s)	1275, 1356, 1371, 1661
EarI	CTCTTC	4 cut(s)	1275, 1356, 1371, 1661
Eco147I	AGGCCT	1 cut(s)	574
Eco47I	GGWCC	3 cut(s)	47, 1246, 1688
Eco57I	CTGAAG	2 cut(s)	705, 1209
EcoO109I	RGGNCCY	1 cut(s)	47
EcoRII	CCWGG	1 cut(s)	1164
FaeI	CATG	7 cut(s)	557, 1043, 1196, 1538, 1633, 1739, 1753
FalI	AAGNNNNNCTT	2 cut(s)	273, 305
FaqI	GGGAC	4 cut(s)	196, 656, 833, 1431
FatI	CATG	7 cut(s)	553, 1039, 1192, 1534, 1629, 1735, 1749
FauI	CCCGC	3 cut(s)	541, 867, 1640
FauNDI	CATATG	1 cut(s)	999
FbaI	TGATCA	1 cut(s)	982
FblI	GTMKAC	2 cut(s)	795, 932
Fnu4HI	GCNGC	8 cut(s)	109, 194, 654, 751, 909, 1307, 1427, 1532
FokI	GGATG	8 cut(s)	107, 475, 662, 803, 1247, 1364, 1379, 1510
Fsp4HI	GCNGC	8 cut(s)	109, 194, 654, 751, 909, 1307, 1427, 1532
FspBI	CTAG	3 cut(s)	942, 1146, 1725
GlaI	GCGC	3 cut(s)	421, 1530, 1575
GluI	GCNGC	8 cut(s)	109, 194, 654, 751, 909, 1307, 1427, 1532
GsaI	CCCAGC	3 cut(s)	471, 915, 1497
GsuI	CTGGAG	1 cut(s)	1702
HaeIII	GGCC	2 cut(s)	574, 1011
HapII	CCGG	1 cut(s)	59
HgaI	GACGC	1 cut(s)	1037
HhaI	GCGC	3 cut(s)	422, 1531, 1576
Hin1I	GRCGYC	1 cut(s)	1048
Hin1II	CATG	7 cut(s)	557, 1043, 1196, 1538, 1633, 1739, 1753
Hin6I	GCGC	3 cut(s)	420, 1529, 1574
HinP1I	GCGC	3 cut(s)	420, 1529, 1574
HincII	GTYRAC	2 cut(s)	368, 933
HindII	GTYRAC	2 cut(s)	368, 933
HindIII	AAGCTT	3 cut(s)	287, 687, 1484
HpaII	CCGG	1 cut(s)	59
HphI	GGTGA	5 cut(s)	889, 966, 1223, 1297, 1424
Hpy166II	GTNNAC	6 cut(s)	368, 551, 796, 926, 933, 1688
Hpy188I	TCNGA	7 cut(s)	331, 403, 787, 982, 1060, 1228, 1606
Hpy188III	TCNNGA	8 cut(s)	150, 233, 581, 588, 683, 962, 1440, 1681
Hpy8I	GTNNAC	6 cut(s)	368, 551, 796, 926, 933, 1688
Hpy99I	CGWCG	1 cut(s)	937
HpyAV	CCTTC	9 cut(s)	60, 180, 628, 1038, 1092, 1215, 1397, 1532, 1561
HpyCH4III	ACNGT	4 cut(s)	625, 827, 930, 1267
HpyCH4V	TGCA	9 cut(s)	617, 750, 893, 1256, 1465, 1501, 1511, 1615, 1739
HpyF10VI	GCNNNNNNNGC	2 cut(s)	114, 199
HpyF3I	CTNAG	4 cut(s)	315, 330, 402, 786
Hsp92I	GRCGYC	1 cut(s)	1048
Hsp92II	CATG	7 cut(s)	557, 1043, 1196, 1538, 1633, 1739, 1753
HspAI	GCGC	3 cut(s)	420, 1529, 1574
Ksp22I	TGATCA	1 cut(s)	982
Kzo9I	GATC	6 cut(s)	187, 523, 862, 982, 1238, 1639
LmnI	GCTCC	3 cut(s)	1102, 1142, 1447
Lsp1109I	GCAGC	7 cut(s)	205, 640, 762, 920, 1318, 1438, 1543
LweI	GCATC	6 cut(s)	640, 1249, 1480, 1488, 1610, 1717
MaeI	CTAG	3 cut(s)	942, 1146, 1725
MaeIII	GTNAC	3 cut(s)	292, 495, 1049
MalI	GATC	6 cut(s)	189, 525, 864, 984, 1240, 1641
MboI	GATC	6 cut(s)	187, 523, 862, 982, 1238, 1639
MfeI	CAATTG	2 cut(s)	243, 1460
MflI	RGATCY	2 cut(s)	862, 1639
MhlI	GDGCHC	1 cut(s)	21
MlsI	TGGCCA	1 cut(s)	1011
MluNI	TGGCCA	1 cut(s)	1011
MlyI	GAGTC	4 cut(s)	107, 289, 556, 1210
Mox20I	TGGCCA	1 cut(s)	1011
MscI	TGGCCA	1 cut(s)	1011
MseI	TTAA	7 cut(s)	228, 279, 483, 666, 771, 1128, 1746
MslI	CAYNNNNRTG	3 cut(s)	213, 1634, 1754
Msp20I	TGGCCA	1 cut(s)	1011
MspA1I	CMGCKG	1 cut(s)	911
MspI	CCGG	1 cut(s)	59
MspR9I	CCNGG	1 cut(s)	1166
MunI	CAATTG	2 cut(s)	243, 1460
Mva1269I	GAATGC	2 cut(s)	1120, 1258
MvaI	CCWGG	1 cut(s)	1166
MwoI	GCNNNNNNNGC	2 cut(s)	114, 199
NdeI	CATATG	1 cut(s)	999
NdeII	GATC	6 cut(s)	187, 523, 862, 982, 1238, 1639
NlaIII	CATG	7 cut(s)	557, 1043, 1196, 1538, 1633, 1739, 1753
NlaIV	GGNNCC	3 cut(s)	660, 1248, 1449
NmuCI	GTSAC	3 cut(s)	292, 495, 1049
NspI	RCATGY	2 cut(s)	1196, 1753
PceI	AGGCCT	1 cut(s)	574
PctI	GAATGC	2 cut(s)	1120, 1258
PfeI	GAWTC	6 cut(s)	146, 311, 584, 1184, 1545, 1651
PkrI	GCNGC	8 cut(s)	110, 195, 655, 752, 910, 1308, 1428, 1533
PleI	GAGTC	4 cut(s)	106, 289, 555, 1209
PpsI	GAGTC	4 cut(s)	106, 289, 555, 1209
PpuMI	RGGWCCY	1 cut(s)	47
PshBI	ATTAAT	1 cut(s)	228
PsiI	TTATAA	2 cut(s)	629, 831
Psp5II	RGGWCCY	1 cut(s)	47
Psp6I	CCWGG	1 cut(s)	1164
PspFI	CCCAGC	3 cut(s)	467, 911, 1493
PspGI	CCWGG	1 cut(s)	1164
PspN4I	GGNNCC	3 cut(s)	660, 1248, 1449
PspPI	GGNCC	3 cut(s)	47, 1246, 1688
PspPPI	RGGWCCY	1 cut(s)	47
PstNI	CAGNNNCTG	1 cut(s)	911
PsuI	RGATCY	2 cut(s)	862, 1639
PvuII	CAGCTG	1 cut(s)	911
RsaI	GTAC	2 cut(s)	531, 996
RsaNI	GTAC	2 cut(s)	530, 995
RseI	CAYNNNNRTG	3 cut(s)	213, 1634, 1754
SalI	GTCGAC	1 cut(s)	931
SaqAI	TTAA	7 cut(s)	228, 279, 483, 666, 771, 1128, 1746
SatI	GCNGC	8 cut(s)	109, 194, 654, 751, 909, 1307, 1427, 1532
Sau3AI	GATC	6 cut(s)	187, 523, 862, 982, 1238, 1639
Sau96I	GGNCC	3 cut(s)	47, 1246, 1688
SchI	GAGTC	4 cut(s)	107, 289, 556, 1210
ScrFI	CCNGG	1 cut(s)	1166
SduI	GDGCHC	1 cut(s)	21
SfaNI	GCATC	6 cut(s)	640, 1249, 1480, 1488, 1610, 1717
SfcI	CTRYAG	1 cut(s)	1421
SinI	GGWCC	3 cut(s)	47, 1246, 1688
SmiMI	CAYNNNNRTG	3 cut(s)	213, 1634, 1754
SpeI	ACTAGT	1 cut(s)	941
SseBI	AGGCCT	1 cut(s)	574
SsiI	CCGC	9 cut(s)	7, 108, 111, 117, 534, 656, 874, 1196, 1647
SspI	AATATT	1 cut(s)	226
SspMI	CTAG	3 cut(s)	942, 1146, 1725
StuI	AGGCCT	1 cut(s)	574
StyD4I	CCNGG	1 cut(s)	1164
TaaI	ACNGT	4 cut(s)	625, 827, 930, 1267
TaqI	TCGA	3 cut(s)	589, 932, 1548
TatI	WGTACW	1 cut(s)	994
TauI	GCSGC	1 cut(s)	111
TfiI	GAWTC	6 cut(s)	146, 311, 584, 1184, 1545, 1651
Tru1I	TTAA	7 cut(s)	228, 279, 483, 666, 771, 1128, 1746
Tru9I	TTAA	7 cut(s)	228, 279, 483, 666, 771, 1128, 1746
TscAI	CASTG	1 cut(s)	273
TseFI	GTSAC	3 cut(s)	292, 495, 1049
TseI	GCWGC	7 cut(s)	193, 653, 750, 908, 1306, 1426, 1531
Tsp45I	GTSAC	3 cut(s)	292, 495, 1049
TspGWI	ACGGA	2 cut(s)	200, 553
TspRI	CASTG	1 cut(s)	273
VpaK11BI	GGWCC	3 cut(s)	47, 1246, 1688
VspI	ATTAAT	1 cut(s)	228
XapI	RAATTY	6 cut(s)	70, 88, 424, 781, 886, 1216
XceI	RCATGY	2 cut(s)	1196, 1753
XmiI	GTMKAC	2 cut(s)	795, 932
XspI	CTAG	3 cut(s)	942, 1146, 1725

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.