Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005304

Physical Location & Seq

Genomic Coordinates Reverse (-)

38085958 .. 38094828

Gene Structure 8871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00245210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGGGCATGTTTTTGGTGAAATGGAGAGGGCTGTGGCTTCTTTACATTCTACTGCTTTATATTATGGTGAACAAAGGCAGAGCTATCAGTCCTGATGGTGAGGCACTTTTAAGCTTCAGGACAGCAGTTGTTAGTTCAGATGGCGTCCTTCTTCAGTGGAGACCAGAAGATCCTGATCCATGTAATTGGAAAGGAGTAAAATGTGAAAATAAAACCAAGAAAGTAATCTACTTGAGTCTTGCTGGTCATAAATTGAGTGGATATATACCTCCTGACCTAGGGAAGCTTGATCAGCTAAAGATTTTAGCTCTTCATAACAACAACTTCTATGGAACTATTCCTTCAGACCTGGGGAATTGTACGCAGCTGCAGCGAATATACTTGCAGGGTAATTACTTGAGCGGATTTATACCCAGTGATTTGGGAAAGCTTTCTGACCTGCAATACTTAGATATTTCAAGTAACTCTCTGAGTGGAAGTATCCCTCCGTCACTGGGAATGTTGGATAATATTGTTACTTTCAACGCGTCAAACAATTTTCTGGTTGGACCAATACCATCTGATGGCATCCTTACGAACTTGCCTGAAAGCTCGTTTGTTGGAAATCGTGGTTTGTGCGGGAAACAAATCAATGTGATATGCAAAGATGACAATGGAGGATCTGGTCCAAATTCCCAAACTCCAAACTCAGAACAAAGTCAAGGCGGAAGGAAGAAATACTCCGGCCGGCTACTAATTAGTGCCTCAGCAACTGTAGGAGCACTGCTTCTGGTGGCTCTCATGTGTTTCTGGGGTTGCTTTCTGTATAAGAAGTTTGGTAAACTTGACGGTAAAGGTCTTGCAATGGATGTCAGAGAAGGTGCATCAATTGTTATGTTTCATGGAGATTTGCCATACTCTTCAAAAGACATTATTAAGAAATTAGAGACTTTGAATGAGGAACACATAATTGGTGTTGGGGGTTTTGGAACAGTGTACAAGCTTGCAATGGATGATGGCAATCTATTTGCACTAAAAAGAATTGTAAAGATGAACGAGGGCTTTGATCGTTTTTTTGAAAGGGAGCTAGAAATTCTTGGAAGTATAAAGCATCGCTACTTAGTGAATTTGAGGGGATATTGCAATTCTCCTACATCAAAGTTGTTGATCTATGATTTTCTATCTGGTGGAAGCCTCGATGAAGCTCTTCACGAAAGATCTGAGCAGCTAGACTGGGATGCACGCTTGAATATTATAATGGGAGCAGCAAAGGGCCTGGCTTACTTGCATCATGATTGCTCACCTAGGATCATACATCGAGATATAAAGTCGAGCAATATTTTACTTGATGGAAATCATGAGGCACGAGTATCTGACTTTGGACTCGCCAAACTGTTGGAGGACGAAGAATCTCACATTACGACGATTGTTGCTGGAACATTTGGTTATCTGGCTCCAGAGTATATGCAAAGTGGTAGAGCAACTGAAAAGACTGATGTTTATAGTTTTGGGGTCCTGGTGCTTGAGGTGTTGAGTGGGAAGCGACCGACAGATGCATCATTCATTGAGAAGGGCCTCAACATTGTTGGCTGGTTAAATTTTCTGGTCACCGAGGATAGGCAAAGAGACATTGTTGATCCGCAGTGTGAAGGAGTGCAAGCTGAAAGCCTTGATGCCTTGCTCTCCGTTGCCATACAATGTGTTTCTTCAAGTCCAGAAGACCGACCCACCATGCACAGGGTGGTCCAGCTGCTTGAATCTGAGGTTATGACACCATGCCCTAGTGACTTCTACGATTCCAACTCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009653 GO:0009664 GO:0009791 GO:0009826 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0022414 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0044237 GO:0044249 GO:0044464 GO:0045229 GO:0048316 GO:0048354 GO:0048359 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0060560 GO:0061458 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase

Protein Analysis

596

Amino Acids

65.72

Weight (kDa)

5.57

Isoelectric Point (pI)

37.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	30 - 68	7.1e-12	Leucine rich repeat N-terminal domain
LRR_8	PF13855	98 - 157	8.2e-07	Leucine rich repeat
Pkinase	PF00069	313 - 576	6.7e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	314 - 577	5.1e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005304)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31420 AT1G31420 AT1G31420 AT2G35620 AT2G35620 AT2G35620 AT2G35620
fragaria_vesca	FvH4_5g24350 FvH4_5g24350 FvH4_5g24350 FvH4_5g24350
malus_domestica	MD00G1078500.v1.1 MD06G1021300.v1.1 MD16G1288500.v1.1
prunus_persica	Prupe.5G017300_v2.0.a1
pyrus_communis	pycom06g01550 pycom16g25580
rosa_chinensis	RchiOBHm_Chr7g0214561
rosa_laevigata	RLG00000002732
rosa_multiflora	Rmu_co8061150.1_g000001 Rmu_sc0003490.1_g000001 Rmu_sc0003490.1_g000002
rosa_roxburghii	Rroxscaffold_3G00245210
rosa_rugosa	Rorug07G0146900
rosa_samantha	Rh7AG282000 Rh7BG273800 Rh7CG301300 Rh7DG286000
rosa_wichuraiana	Rw7G024120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1235
Acc36I	ACCTGC	1 cut(s)	447
AccB7I	CCANNNNNTGG	1 cut(s)	563
AccBSI	CCGCTC	1 cut(s)	402
AccII	CGCG	1 cut(s)	527
AciI	CCGC	4 cut(s)	402, 618, 705, 1619
AclWI	GGATC	5 cut(s)	164, 170, 667, 1295, 1610
AcoI	YGGCCR	1 cut(s)	724
AcsI	RAATTY	4 cut(s)	670, 1071, 1105, 1576
AcuI	CTGAAG	3 cut(s)	100, 137, 327
AcyI	GRCGYC	1 cut(s)	144
AdeI	CACNNNGTG	1 cut(s)	1720
AfaI	GTAC	2 cut(s)	361, 977
AfiI	CCNNNNNNNGG	5 cut(s)	278, 494, 563, 1596, 1716
AflIII	ACRYGT	1 cut(s)	525
AgsI	TTSAA	8 cut(s)	459, 523, 903, 934, 1058, 1228, 1689, 1736
AjnI	CCWGG	3 cut(s)	348, 1254, 1494
AjuI	GAANNNNNNNTTGG	2 cut(s)	933, 965
Alw21I	GWGCWC	1 cut(s)	763
Alw26I	GTCTC	3 cut(s)	154, 920, 1599
AlwI	GGATC	5 cut(s)	164, 170, 667, 1295, 1610
AlwNI	CAGNNNCTG	1 cut(s)	752
AoxI	GGCC	3 cut(s)	724, 1252, 1552
ApeKI	GCWGC	6 cut(s)	364, 367, 370, 1204, 1244, 1729
ApoI	RAATTY	4 cut(s)	670, 1071, 1105, 1576
Asp700I	GAANNNNTTC	2 cut(s)	430, 1185
AspA2I	CCTAGG	2 cut(s)	277, 1283
AspS9I	GGNCC	6 cut(s)	548, 665, 1252, 1492, 1552, 1723
AsuHPI	GGTGA	5 cut(s)	28, 79, 110, 1272, 1579
AvaII	GGWCC	4 cut(s)	548, 665, 1492, 1723
AvrII	CCTAGG	2 cut(s)	277, 1283
BauI	CACGAG	1 cut(s)	1344
BbsI	GAAGAC	1 cut(s)	1704
Bbv12I	GWGCWC	1 cut(s)	763
BbvCI	CCTCAGC	1 cut(s)	745
BbvI	GCAGC	6 cut(s)	354, 376, 382, 1216, 1256, 1716
BccI	CCATC	6 cut(s)	89, 134, 557, 565, 989, 1322
BciT130I	CCWGG	3 cut(s)	350, 1256, 1496
BciVI	GTATCC	1 cut(s)	491
BclI	TGATCA	1 cut(s)	289
BcoDI	GTCTC	3 cut(s)	154, 920, 1599
BfaI	CTAG	5 cut(s)	278, 1067, 1208, 1284, 1761
BfmI	CTRYAG	2 cut(s)	368, 753
BfuAI	ACCTGC	1 cut(s)	447
BfuI	GTATCC	1 cut(s)	491
BglII	AGATCT	1 cut(s)	1196
BisI	GCNGC	6 cut(s)	365, 368, 371, 1205, 1245, 1730
BlnI	CCTAGG	2 cut(s)	277, 1283
BlsI	GCNGC	6 cut(s)	366, 369, 372, 1206, 1246, 1731
Bme1390I	CCNGG	3 cut(s)	350, 1256, 1496
Bme18I	GGWCC	4 cut(s)	548, 665, 1492, 1723
BmgT120I	GGNCC	6 cut(s)	548, 665, 1252, 1492, 1552, 1723
BmiI	GGNNCC	2 cut(s)	1434, 1493
BmrFI	CCNGG	3 cut(s)	350, 1256, 1496
BmrI	ACTGGG	3 cut(s)	408, 503, 1222
BmsI	GCATC	8 cut(s)	576, 872, 1099, 1207, 1276, 1522, 1544, 1642
BmuI	ACTGGG	3 cut(s)	408, 503, 1222
BpiI	GAAGAC	1 cut(s)	1704
BpmI	CTGGAG	1 cut(s)	1419
Bpu10I	CCTNAGC	1 cut(s)	745
BpuEI	CTTGAG	3 cut(s)	253, 418, 1523
BsaBI	GATNNNNATC	3 cut(s)	174, 999, 1332
BsaHI	GRCGYC	1 cut(s)	144
BsaI	GGTCTC	1 cut(s)	154
BsaJI	CCNNGG	4 cut(s)	277, 349, 1283, 1590
Bsc4I	CCNNNNNNNGG	5 cut(s)	278, 494, 563, 1596, 1716
Bse118I	RCCGGY	1 cut(s)	726
Bse1I	ACTGG	3 cut(s)	414, 498, 1217
Bse3DI	GCAATG	2 cut(s)	849, 993
Bse8I	GATNNNNATC	3 cut(s)	174, 999, 1332
BseBI	CCWGG	3 cut(s)	350, 1256, 1496
BseDI	CCNNGG	4 cut(s)	277, 349, 1283, 1590
BseGI	GGATG	4 cut(s)	567, 853, 997, 1222
BseJI	GATNNNNATC	3 cut(s)	174, 999, 1332
BseLI	CCNNNNNNNGG	5 cut(s)	278, 494, 563, 1596, 1716
BseMI	GCAATG	2 cut(s)	849, 993
BseMII	CTCAG	5 cut(s)	461, 702, 759, 1191, 1731
BseNI	ACTGG	3 cut(s)	414, 498, 1217
BseX3I	CGGCCG	1 cut(s)	724
BseXI	GCAGC	6 cut(s)	354, 376, 382, 1216, 1256, 1716
Bsh1236I	CGCG	1 cut(s)	527
Bsh1285I	CGRYCG	2 cut(s)	727, 1526
BshFI	GGCC	3 cut(s)	726, 1254, 1554
BsiEI	CGRYCG	2 cut(s)	727, 1526
BsiHKAI	GWGCWC	1 cut(s)	763
BsiSI	CCGG	2 cut(s)	723, 727
BslI	CCNNNNNNNGG	5 cut(s)	278, 494, 563, 1596, 1716
BsmAI	GTCTC	3 cut(s)	154, 920, 1599
BsnI	GGCC	3 cut(s)	726, 1254, 1554
Bso31I	GGTCTC	1 cut(s)	154
Bsp1286I	GDGCHC	1 cut(s)	763
Bsp1407I	TGTACA	1 cut(s)	975
Bsp143I	GATC	9 cut(s)	169, 175, 289, 659, 1045, 1146, 1196, 1287, 1615
BspACI	CCGC	4 cut(s)	402, 618, 705, 1619
BspANI	GGCC	3 cut(s)	726, 1254, 1554
BspCNI	CTCAG	5 cut(s)	462, 701, 758, 1192, 1732
BspFNI	CGCG	1 cut(s)	527
BspHI	TCATGA	2 cut(s)	1270, 1336
BspLI	GGNNCC	2 cut(s)	1434, 1493
BspMAI	CTGCAG	1 cut(s)	372
BspMI	ACCTGC	1 cut(s)	447
BspPI	GGATC	5 cut(s)	164, 170, 667, 1295, 1610
BspQI	GCTCTTC	2 cut(s)	315, 1191
BspTNI	GGTCTC	1 cut(s)	154
BsrBI	CCGCTC	1 cut(s)	402
BsrDI	GCAATG	2 cut(s)	849, 993
BsrFI	RCCGGY	1 cut(s)	726
BsrGI	TGTACA	1 cut(s)	975
BsrI	ACTGG	3 cut(s)	414, 498, 1217
BssAI	RCCGGY	1 cut(s)	726
BssECI	CCNNGG	4 cut(s)	277, 349, 1283, 1590
BssMI	GATC	9 cut(s)	169, 175, 289, 659, 1045, 1146, 1196, 1287, 1615
BssNI	GRCGYC	1 cut(s)	144
BssSI	CACGAG	1 cut(s)	1344
BssT1I	CCWWGG	2 cut(s)	277, 1283
Bst2BI	CACGAG	1 cut(s)	1344
Bst2UI	CCWGG	3 cut(s)	350, 1256, 1496
Bst4CI	ACNGT	4 cut(s)	754, 830, 973, 1374
Bst6I	CTCTTC	3 cut(s)	315, 904, 1191
BstACI	GRCGYC	1 cut(s)	144
BstAUI	TGTACA	1 cut(s)	975
BstC8I	GCNNGC	4 cut(s)	728, 984, 1222, 1638
BstDEI	CTNAG	7 cut(s)	448, 470, 688, 745, 1099, 1200, 1740
BstEII	GGTNACC	1 cut(s)	1585
BstENI	CCTNNNNNAGG	1 cut(s)	276
BstF5I	GGATG	4 cut(s)	567, 853, 997, 1222
BstFNI	CGCG	1 cut(s)	527
BstKTI	GATC	9 cut(s)	172, 178, 292, 662, 1048, 1149, 1199, 1290, 1618
BstMAI	GTCTC	3 cut(s)	154, 920, 1599
BstMBI	GATC	9 cut(s)	169, 175, 289, 659, 1045, 1146, 1196, 1287, 1615
BstMCI	CGRYCG	2 cut(s)	727, 1526
BstMWI	GCNNNNNNNGC	2 cut(s)	292, 370
BstNI	CCWGG	3 cut(s)	350, 1256, 1496
BstNSI	RCATGY	1 cut(s)	10
BstPI	GGTNACC	1 cut(s)	1585
BstSCI	CCNGG	3 cut(s)	348, 1254, 1494
BstSFI	CTRYAG	2 cut(s)	368, 753
BstUI	CGCG	1 cut(s)	527
BstV1I	GCAGC	6 cut(s)	354, 376, 382, 1216, 1256, 1716
BstV2I	GAAGAC	1 cut(s)	1704
BstX2I	RGATCY	3 cut(s)	169, 659, 1196
BstXI	CCANNNNNNTGG	3 cut(s)	186, 421, 1375
BstYI	RGATCY	3 cut(s)	169, 659, 1196
BstZI	CGGCCG	1 cut(s)	724
BsuI	GTATCC	1 cut(s)	491
BsuRI	GGCC	3 cut(s)	726, 1254, 1554
BtgZI	GCGATG	1 cut(s)	1076
BtsCI	GGATG	4 cut(s)	567, 853, 997, 1222
BtsI	GCAGTG	2 cut(s)	761, 1628
BtsIMutI	CAGTG	6 cut(s)	161, 421, 491, 761, 978, 1628
BveI	ACCTGC	1 cut(s)	447
Cac8I	GCNNGC	4 cut(s)	728, 984, 1222, 1638
CaiI	CAGNNNCTG	1 cut(s)	752
CciI	TCATGA	2 cut(s)	1270, 1336
Cfr10I	RCCGGY	1 cut(s)	726
Cfr13I	GGNCC	6 cut(s)	548, 665, 1252, 1492, 1552, 1723
CseI	GACGC	2 cut(s)	133, 516
Csp6I	GTAC	2 cut(s)	360, 976
CviAII	CATG	8 cut(s)	7, 180, 781, 881, 1271, 1337, 1711, 1755
CviQI	GTAC	2 cut(s)	360, 976
DdeI	CTNAG	7 cut(s)	448, 470, 688, 745, 1099, 1200, 1740
DpnI	GATC	9 cut(s)	171, 177, 291, 661, 1047, 1148, 1198, 1289, 1617
DpnII	GATC	9 cut(s)	169, 175, 289, 659, 1045, 1146, 1196, 1287, 1615
DraIII	CACNNNGTG	1 cut(s)	1720
EaeI	YGGCCR	1 cut(s)	724
EagI	CGGCCG	1 cut(s)	724
Eam1104I	CTCTTC	3 cut(s)	315, 904, 1191
EarI	CTCTTC	3 cut(s)	315, 904, 1191
EciI	GGCGGA	1 cut(s)	720
EclXI	CGGCCG	1 cut(s)	724
Eco130I	CCWWGG	2 cut(s)	277, 1283
Eco31I	GGTCTC	1 cut(s)	154
Eco47I	GGWCC	4 cut(s)	548, 665, 1492, 1723
Eco52I	CGGCCG	1 cut(s)	724
Eco57I	CTGAAG	3 cut(s)	100, 137, 327
Eco91I	GGTNACC	1 cut(s)	1585
EcoNI	CCTNNNNNAGG	1 cut(s)	276
EcoO109I	RGGNCCY	3 cut(s)	1252, 1492, 1552
EcoO65I	GGTNACC	1 cut(s)	1585
EcoRII	CCWGG	3 cut(s)	348, 1254, 1494
EcoT14I	CCWWGG	2 cut(s)	277, 1283
EcoT22I	ATGCAT	1 cut(s)	1537
ErhI	CCWWGG	2 cut(s)	277, 1283
FaeI	CATG	8 cut(s)	10, 183, 784, 884, 1274, 1340, 1714, 1758
FatI	CATG	8 cut(s)	6, 179, 780, 880, 1270, 1336, 1710, 1754
FauI	CCCGC	1 cut(s)	611
FbaI	TGATCA	1 cut(s)	289
Fnu4HI	GCNGC	6 cut(s)	365, 368, 371, 1205, 1245, 1730
FokI	GGATG	4 cut(s)	554, 860, 1004, 1229
Fsp4HI	GCNGC	6 cut(s)	365, 368, 371, 1205, 1245, 1730
FspBI	CTAG	5 cut(s)	278, 1067, 1208, 1284, 1761
GluI	GCNGC	6 cut(s)	365, 368, 371, 1205, 1245, 1730
GsuI	CTGGAG	1 cut(s)	1419
HaeIII	GGCC	3 cut(s)	726, 1254, 1554
HapII	CCGG	2 cut(s)	723, 727
HgaI	GACGC	2 cut(s)	133, 516
Hin1I	GRCGYC	1 cut(s)	144
Hin1II	CATG	8 cut(s)	10, 183, 784, 884, 1274, 1340, 1714, 1758
HindIII	AAGCTT	4 cut(s)	112, 284, 428, 980
HinfI	GANTC	5 cut(s)	235, 1362, 1388, 1736, 1775
HpaII	CCGG	2 cut(s)	723, 727
HphI	GGTGA	5 cut(s)	28, 79, 110, 1272, 1579
Hpy166II	GTNNAC	3 cut(s)	70, 821, 976
Hpy8I	GTNNAC	3 cut(s)	70, 821, 976
Hpy99I	CGWCG	1 cut(s)	1405
HpyAV	CCTTC	6 cut(s)	158, 351, 702, 851, 1543, 1622
HpyCH4III	ACNGT	4 cut(s)	754, 830, 973, 1374
HpyF10VI	GCNNNNNNNGC	2 cut(s)	292, 370
HpyF3I	CTNAG	7 cut(s)	448, 470, 688, 745, 1099, 1200, 1740
Hsp92I	GRCGYC	1 cut(s)	144
Hsp92II	CATG	8 cut(s)	10, 183, 784, 884, 1274, 1340, 1714, 1758
KroI	GCCGGC	1 cut(s)	726
KroNI	GCCGGC	1 cut(s)	728
Ksp22I	TGATCA	1 cut(s)	289
Kzo9I	GATC	9 cut(s)	169, 175, 289, 659, 1045, 1146, 1196, 1287, 1615
LguI	GCTCTTC	2 cut(s)	315, 1191
LmnI	GCTCC	4 cut(s)	758, 1063, 1241, 1438
Lsp1109I	GCAGC	6 cut(s)	354, 376, 382, 1216, 1256, 1716
LweI	GCATC	8 cut(s)	576, 872, 1099, 1207, 1276, 1522, 1544, 1642
MaeI	CTAG	5 cut(s)	278, 1067, 1208, 1284, 1761
MaeIII	GTNAC	5 cut(s)	461, 489, 514, 1585, 1763
MalI	GATC	9 cut(s)	171, 177, 291, 661, 1047, 1148, 1198, 1289, 1617
MbiI	CCGCTC	1 cut(s)	402
MboI	GATC	9 cut(s)	169, 175, 289, 659, 1045, 1146, 1196, 1287, 1615
MboII	GAAGA	9 cut(s)	143, 179, 302, 724, 891, 1178, 1397, 1677, 1709
MfeI	CAATTG	1 cut(s)	867
MflI	RGATCY	3 cut(s)	169, 659, 1196
MhlI	GDGCHC	1 cut(s)	763
MluI	ACGCGT	1 cut(s)	525
MlyI	GAGTC	2 cut(s)	244, 1356
MmeI	TCCRAC	4 cut(s)	483, 526, 580, 1356
Mph1103I	ATGCAT	1 cut(s)	1537
MroNI	GCCGGC	1 cut(s)	726
MroXI	GAANNNNTTC	2 cut(s)	430, 1185
MseI	TTAA	4 cut(s)	110, 915, 1574, 1789
MspA1I	CMGCKG	2 cut(s)	367, 1729
MspI	CCGG	2 cut(s)	723, 727
MspR9I	CCNGG	3 cut(s)	350, 1256, 1496
MunI	CAATTG	1 cut(s)	867
MvaI	CCWGG	3 cut(s)	350, 1256, 1496
MvnI	CGCG	1 cut(s)	527
MwoI	GCNNNNNNNGC	2 cut(s)	292, 370
NaeI	GCCGGC	1 cut(s)	728
NdeII	GATC	9 cut(s)	169, 175, 289, 659, 1045, 1146, 1196, 1287, 1615
NgoMIV	GCCGGC	1 cut(s)	726
NlaIII	CATG	8 cut(s)	10, 183, 784, 884, 1274, 1340, 1714, 1758
NlaIV	GGNNCC	2 cut(s)	1434, 1493
NmuCI	GTSAC	3 cut(s)	489, 1585, 1763
NsiI	ATGCAT	1 cut(s)	1537
NspI	RCATGY	1 cut(s)	10
PagI	TCATGA	2 cut(s)	1270, 1336
PciSI	GCTCTTC	2 cut(s)	315, 1191
PdiI	GCCGGC	1 cut(s)	728
PdmI	GAANNNNTTC	2 cut(s)	430, 1185
PfeI	GAWTC	3 cut(s)	1388, 1736, 1775
PflMI	CCANNNNNTGG	1 cut(s)	563
PkrI	GCNGC	6 cut(s)	366, 369, 372, 1206, 1246, 1731
PleI	GAGTC	2 cut(s)	243, 1356
PpsI	GAGTC	2 cut(s)	243, 1356
PpuMI	RGGWCCY	1 cut(s)	1492
PsiI	TTATAA	1 cut(s)	1235
Psp5II	RGGWCCY	1 cut(s)	1492
Psp6I	CCWGG	3 cut(s)	348, 1254, 1494
PspEI	GGTNACC	1 cut(s)	1585
PspGI	CCWGG	3 cut(s)	348, 1254, 1494
PspN4I	GGNNCC	2 cut(s)	1434, 1493
PspPI	GGNCC	6 cut(s)	548, 665, 1252, 1492, 1552, 1723
PspPPI	RGGWCCY	1 cut(s)	1492
PstI	CTGCAG	1 cut(s)	372
PstNI	CAGNNNCTG	1 cut(s)	752
PsuI	RGATCY	3 cut(s)	169, 659, 1196
PvuII	CAGCTG	2 cut(s)	367, 1729
RsaI	GTAC	2 cut(s)	361, 977
RsaNI	GTAC	2 cut(s)	360, 976
SapI	GCTCTTC	2 cut(s)	315, 1191
SaqAI	TTAA	4 cut(s)	110, 915, 1574, 1789
SatI	GCNGC	6 cut(s)	365, 368, 371, 1205, 1245, 1730
Sau3AI	GATC	9 cut(s)	169, 175, 289, 659, 1045, 1146, 1196, 1287, 1615
Sau96I	GGNCC	6 cut(s)	548, 665, 1252, 1492, 1552, 1723
SchI	GAGTC	2 cut(s)	244, 1356
ScrFI	CCNGG	3 cut(s)	350, 1256, 1496
SduI	GDGCHC	1 cut(s)	763
SfaNI	GCATC	8 cut(s)	576, 872, 1099, 1207, 1276, 1522, 1544, 1642
SfcI	CTRYAG	2 cut(s)	368, 753
SinI	GGWCC	4 cut(s)	548, 665, 1492, 1723
SmlI	CTYRAG	3 cut(s)	232, 397, 1502
SmoI	CTYRAG	3 cut(s)	232, 397, 1502
SsiI	CCGC	4 cut(s)	402, 618, 705, 1619
SspI	AATATT	3 cut(s)	511, 1231, 1318
SspMI	CTAG	5 cut(s)	278, 1067, 1208, 1284, 1761
StyD4I	CCNGG	3 cut(s)	348, 1254, 1494
StyI	CCWWGG	2 cut(s)	277, 1283
TaaI	ACNGT	4 cut(s)	754, 830, 973, 1374
TaqI	TCGA	3 cut(s)	1176, 1297, 1310
TaqII	GACCGA	2 cut(s)	1540, 1716
TatI	WGTACW	1 cut(s)	975
TfiI	GAWTC	3 cut(s)	1388, 1736, 1775
Tru1I	TTAA	4 cut(s)	110, 915, 1574, 1789
Tru9I	TTAA	4 cut(s)	110, 915, 1574, 1789
TscAI	CASTG	6 cut(s)	161, 421, 498, 768, 978, 1628
TseFI	GTSAC	3 cut(s)	489, 1585, 1763
TseI	GCWGC	6 cut(s)	364, 367, 370, 1204, 1244, 1729
Tsp45I	GTSAC	3 cut(s)	489, 1585, 1763
TspDTI	ATGAA	5 cut(s)	302, 869, 1046, 1194, 1531
TspGWI	ACGGA	2 cut(s)	477, 1654
TspRI	CASTG	6 cut(s)	161, 421, 498, 768, 978, 1628
Van91I	CCANNNNNTGG	1 cut(s)	563
VpaK11BI	GGWCC	4 cut(s)	548, 665, 1492, 1723
XagI	CCTNNNNNAGG	1 cut(s)	276
XapI	RAATTY	4 cut(s)	670, 1071, 1105, 1576
XceI	RCATGY	1 cut(s)	10
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1717
XmaJI	CCTAGG	2 cut(s)	277, 1283
XmnI	GAANNNNTTC	2 cut(s)	430, 1185
XspI	CTAG	5 cut(s)	278, 1067, 1208, 1284, 1761
Zsp2I	ATGCAT	1 cut(s)	1537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.