Rh7CG301300

LRR receptor-like serine threonine-protein kinase FEI

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
31297985 .. 31306139
8155 bp
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UTR
Exon/CDS
Intron
Rh7CG301300.1

Sequence Viewer

Length: 1545 bp
ATGGGCATGTTTTTGGTGAAATGGAGAGGGCTGTGGCTTCTTTACATTCTACTGCTTTATATTACTGTGAACAAAGGCAGAGCTATCAGTCCTGATGGTGAGGCACTTTTAAGCTTCAGGACAGCAGTTGTTAGTTCAGATGGCATCCTTCTTCAGTGGAGACCAGAAGATCCTGATCCATGTAATTGGAAAGGAGTAAAATGTGAAAATAAAACCAAGAAAGTAATCTACTTGAGTCTTGCTGGTCATAAATTGAGTGGATTTATACCTCCTGACTTAGGGAAGCTTGATCAGCTAAAGATTTTAGCTCTTCATAACAACAACTTCTATGGAACTATTCCTTCAGACCTGGGGAATTGTACACAGCTGCAGCGAATATACTTGCAGGGTAATTACTTGAGCGGATTTATCCCCAGTGATTTGGGAAAGCTTTCTGACCTCCAATACTTAGATATTTCAAGTAACTCTCTGAGTGGAAGTATCCCTCCGTCACTGGGAAAGTTGGATAATATTGTTACTTTCAACGCGTCAAACAATTTTCTGGTTGGACCAATACCGCCCGATGGCATCCTCACGAACTTGCCTGAAAGCTCGTTTGTTGGAAATCGTGGTTTGTGCGGGAAACAAATCAATGTGGTATGCAAAGATGACAATGGAGGATCTGCTCCAAATTCCCAAACTCCAAACTCAGAACAAAGTCAAGGCGGAAGGAAGAAATACTCCGGCCGGCTACTAATTAGTGCCTCAGCAACTGTAGGAGCGCTGCTTCTGGTGGCTCTCATGTGTTTCTGGGGTTGCTTTCTGTATAAGAAGTTTGGTAAACTTGACGGTAAAGGTCTTGCAATGGATGTCAGAGAAGGTGCATCAATTGTTATGTTTCATGGAGATTTGCCATACTCTTCTAAAGACATTATTAAGAAATTAGAGACTTTGAATGAGGAACACATAATTGGTGTTGGGGGTTTTGGAACAGTGTACAAGCTTGCAATGGATGATGGCAATCTATTTGCACTAAAAAGAATTGTAAAGATGAACGAGGGCTTTGATCGTTTTTTTGAAAGGGAGCTAGAAATTCTTGGAAGTATAAAGCATCGCTACTTAGTGAATTTGAGGGGATACTGCAATTCTCCTACATCAAAGTTGTTGATCTATGATTTTCTATCTGGTGGAAGCCTCGATGAAGCTCTTCACGAGTATATGCAAAGTGGTAGAGCAACTGAAAAGACTGATGTTTATAGTTTTGGGGTCCTGGTGCTTGAGGTGTTGAGTGGGAAGCGACCGACAGATGCATCATTCATTGAGAAGGGCCTTAACATTGTTGGCTGGTTAAATTTTCTGGTCACCGAGGATAGGCAAAGAGACATTGTTGATCCGCAGTGTGAAGGAGTGCAAGCTGAAAGCCTTGATGCCTTGCTCTCCGTCGCCATACAATGTGTTTCTTCAAGTCCAGAAGACCGACCCACCATGCACAGGGTGGTCCAGCTGCTTGAATCTGAGGTTATGACACCATGCCCCAGTGACTTCTATGATTCCAACTCTGATTAA

Protein Analysis

514

Amino Acids

56.58

Weight (kDa)

5.77

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 68 1.3e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 77 - 171 4.2e-06 Leucine-rich repeat region
Pkinase PF00069 313 - 398 1e-10 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 314 - 398 2.6e-07 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 398 - 495 5.1e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 402
AccII CGCG 1 cut(s) 527
AciI CCGC 5 cut(s) 402, 557, 618, 705, 1373
AclWI GGATC 4 cut(s) 164, 170, 667, 1364
AcoI YGGCCR 1 cut(s) 724
AcsI RAATTY 4 cut(s) 670, 1071, 1105, 1330
AcuI CTGAAG 3 cut(s) 100, 137, 327
AdeI CACNNNGTG 1 cut(s) 1474
AfaI GTAC 2 cut(s) 361, 977
AfeI AGCGCT 1 cut(s) 762
AfiI CCNNNNNNNGG 5 cut(s) 278, 494, 563, 1350, 1470
AflIII ACRYGT 1 cut(s) 525
AgsI TTSAA 6 cut(s) 459, 523, 934, 1058, 1443, 1490
AjnI CCWGG 2 cut(s) 348, 1248
AjuI GAANNNNNNNTTGG 2 cut(s) 933, 965
Alw26I GTCTC 3 cut(s) 154, 920, 1353
AlwI GGATC 4 cut(s) 164, 170, 667, 1364
AlwNI CAGNNNCTG 1 cut(s) 752
Aor51HI AGCGCT 1 cut(s) 762
AoxI GGCC 2 cut(s) 724, 1306
ApeKI GCWGC 4 cut(s) 367, 370, 763, 1483
ApoI RAATTY 4 cut(s) 670, 1071, 1105, 1330
Asp700I GAANNNNTTC 2 cut(s) 430, 1185
AspLEI GCGC 1 cut(s) 763
AspS9I GGNCC 4 cut(s) 548, 1246, 1306, 1477
AsuHPI GGTGA 3 cut(s) 28, 110, 1333
AvaII GGWCC 3 cut(s) 548, 1246, 1477
BauI CACGAG 1 cut(s) 1190
BbsI GAAGAC 1 cut(s) 1458
BbvCI CCTCAGC 1 cut(s) 745
BbvI GCAGC 4 cut(s) 354, 382, 750, 1470
BccI CCATC 4 cut(s) 89, 134, 557, 989
BciT130I CCWGG 2 cut(s) 350, 1250
BciVI GTATCC 2 cut(s) 491, 1109
BclI TGATCA 1 cut(s) 289
BcoDI GTCTC 3 cut(s) 154, 920, 1353
BfaI CTAG 1 cut(s) 1067
BfmI CTRYAG 2 cut(s) 368, 753
BfoI RGCGCY 1 cut(s) 764
BfuI GTATCC 2 cut(s) 491, 1109
BisI GCNGC 4 cut(s) 368, 371, 764, 1484
BlsI GCNGC 4 cut(s) 369, 372, 765, 1485
Bme1390I CCNGG 2 cut(s) 350, 1250
Bme18I GGWCC 3 cut(s) 548, 1246, 1477
BmgT120I GGNCC 4 cut(s) 548, 1246, 1306, 1477
BmiI GGNNCC 1 cut(s) 1247
BmrFI CCNGG 2 cut(s) 350, 1250
BmrI ACTGGG 3 cut(s) 408, 503, 1509
BmsI GCATC 7 cut(s) 153, 576, 872, 1099, 1276, 1298, 1396
BmuI ACTGGG 3 cut(s) 408, 503, 1509
BpiI GAAGAC 1 cut(s) 1458
Bpu10I CCTNAGC 1 cut(s) 745
BpuEI CTTGAG 3 cut(s) 253, 418, 1277
BsaBI GATNNNNATC 2 cut(s) 174, 999
BsaI GGTCTC 1 cut(s) 154
BsaJI CCNNGG 2 cut(s) 349, 1344
Bsc4I CCNNNNNNNGG 5 cut(s) 278, 494, 563, 1350, 1470
Bse118I RCCGGY 1 cut(s) 726
Bse1I ACTGG 3 cut(s) 414, 498, 1515
Bse3DI GCAATG 2 cut(s) 849, 993
Bse8I GATNNNNATC 2 cut(s) 174, 999
BseBI CCWGG 2 cut(s) 350, 1250
BseDI CCNNGG 2 cut(s) 349, 1344
BseGI GGATG 4 cut(s) 144, 567, 853, 997
BseJI GATNNNNATC 2 cut(s) 174, 999
BseLI CCNNNNNNNGG 5 cut(s) 278, 494, 563, 1350, 1470
BseMI GCAATG 2 cut(s) 849, 993
BseMII CTCAG 4 cut(s) 461, 702, 759, 1485
BseNI ACTGG 3 cut(s) 414, 498, 1515
BseX3I CGGCCG 1 cut(s) 724
BseXI GCAGC 4 cut(s) 354, 382, 750, 1470
Bsh1236I CGCG 1 cut(s) 527
Bsh1285I CGRYCG 2 cut(s) 727, 1280
BshFI GGCC 2 cut(s) 726, 1308
BsiEI CGRYCG 2 cut(s) 727, 1280
BsiSI CCGG 2 cut(s) 723, 727
BslI CCNNNNNNNGG 5 cut(s) 278, 494, 563, 1350, 1470
BsmAI GTCTC 3 cut(s) 154, 920, 1353
BsnI GGCC 2 cut(s) 726, 1308
Bso31I GGTCTC 1 cut(s) 154
Bsp1407I TGTACA 2 cut(s) 359, 975
Bsp143I GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1369
BspACI CCGC 5 cut(s) 402, 557, 618, 705, 1373
BspANI GGCC 2 cut(s) 726, 1308
BspCNI CTCAG 4 cut(s) 462, 701, 758, 1486
BspFNI CGCG 1 cut(s) 527
BspLI GGNNCC 1 cut(s) 1247
BspMAI CTGCAG 1 cut(s) 372
BspPI GGATC 4 cut(s) 164, 170, 667, 1364
BspQI GCTCTTC 2 cut(s) 315, 1191
BspTNI GGTCTC 1 cut(s) 154
BsrBI CCGCTC 1 cut(s) 402
BsrDI GCAATG 2 cut(s) 849, 993
BsrFI RCCGGY 1 cut(s) 726
BsrGI TGTACA 2 cut(s) 359, 975
BsrI ACTGG 3 cut(s) 414, 498, 1515
BssAI RCCGGY 1 cut(s) 726
BssECI CCNNGG 2 cut(s) 349, 1344
BssMI GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1369
BssSI CACGAG 1 cut(s) 1190
Bst2BI CACGAG 1 cut(s) 1190
Bst2UI CCWGG 2 cut(s) 350, 1250
Bst4CI ACNGT 4 cut(s) 67, 754, 830, 973
Bst6I CTCTTC 3 cut(s) 315, 904, 1191
BstAUI TGTACA 2 cut(s) 359, 975
BstC8I GCNNGC 3 cut(s) 728, 984, 1392
BstDEI CTNAG 7 cut(s) 277, 448, 470, 688, 745, 1099, 1494
BstEII GGTNACC 1 cut(s) 1339
BstENI CCTNNNNNAGG 1 cut(s) 276
BstF5I GGATG 4 cut(s) 144, 567, 853, 997
BstFNI CGCG 1 cut(s) 527
BstH2I RGCGCY 1 cut(s) 764
BstHHI GCGC 1 cut(s) 763
BstKTI GATC 7 cut(s) 172, 178, 292, 662, 1048, 1149, 1372
BstMAI GTCTC 3 cut(s) 154, 920, 1353
BstMBI GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1369
BstMCI CGRYCG 2 cut(s) 727, 1280
BstMWI GCNNNNNNNGC 1 cut(s) 292
BstNI CCWGG 2 cut(s) 350, 1250
BstNSI RCATGY 1 cut(s) 10
BstPI GGTNACC 1 cut(s) 1339
BstSCI CCNGG 2 cut(s) 348, 1248
BstSFI CTRYAG 2 cut(s) 368, 753
BstUI CGCG 1 cut(s) 527
BstV1I GCAGC 4 cut(s) 354, 382, 750, 1470
BstV2I GAAGAC 1 cut(s) 1458
BstX2I RGATCY 2 cut(s) 169, 659
BstXI CCANNNNNNTGG 2 cut(s) 186, 421
BstYI RGATCY 2 cut(s) 169, 659
BstZI CGGCCG 1 cut(s) 724
BsuI GTATCC 2 cut(s) 491, 1109
BsuRI GGCC 2 cut(s) 726, 1308
BtgZI GCGATG 1 cut(s) 1076
BtsCI GGATG 4 cut(s) 144, 567, 853, 997
BtsI GCAGTG 1 cut(s) 1382
BtsIMutI CAGTG 6 cut(s) 161, 421, 491, 978, 1382, 1522
Cac8I GCNNGC 3 cut(s) 728, 984, 1392
CaiI CAGNNNCTG 1 cut(s) 752
CfoI GCGC 1 cut(s) 763
Cfr10I RCCGGY 1 cut(s) 726
Cfr13I GGNCC 4 cut(s) 548, 1246, 1306, 1477
CseI GACGC 1 cut(s) 516
Csp6I GTAC 2 cut(s) 360, 976
CviAII CATG 6 cut(s) 7, 180, 781, 881, 1465, 1509
CviQI GTAC 2 cut(s) 360, 976
DdeI CTNAG 7 cut(s) 277, 448, 470, 688, 745, 1099, 1494
DpnI GATC 7 cut(s) 171, 177, 291, 661, 1047, 1148, 1371
DpnII GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1369
DraIII CACNNNGTG 1 cut(s) 1474
EaeI YGGCCR 1 cut(s) 724
EagI CGGCCG 1 cut(s) 724
Eam1104I CTCTTC 3 cut(s) 315, 904, 1191
EarI CTCTTC 3 cut(s) 315, 904, 1191
EciI GGCGGA 1 cut(s) 720
EclXI CGGCCG 1 cut(s) 724
Eco31I GGTCTC 1 cut(s) 154
Eco47I GGWCC 3 cut(s) 548, 1246, 1477
Eco47III AGCGCT 1 cut(s) 762
Eco52I CGGCCG 1 cut(s) 724
Eco57I CTGAAG 3 cut(s) 100, 137, 327
Eco91I GGTNACC 1 cut(s) 1339
EcoNI CCTNNNNNAGG 1 cut(s) 276
EcoO109I RGGNCCY 2 cut(s) 1246, 1306
EcoO65I GGTNACC 1 cut(s) 1339
EcoRII CCWGG 2 cut(s) 348, 1248
EcoT22I ATGCAT 1 cut(s) 1291
FaeI CATG 6 cut(s) 10, 183, 784, 884, 1468, 1512
FatI CATG 6 cut(s) 6, 179, 780, 880, 1464, 1508
FauI CCCGC 1 cut(s) 611
FbaI TGATCA 1 cut(s) 289
Fnu4HI GCNGC 4 cut(s) 368, 371, 764, 1484
FokI GGATG 4 cut(s) 131, 554, 860, 1004
Fsp4HI GCNGC 4 cut(s) 368, 371, 764, 1484
FspBI CTAG 1 cut(s) 1067
GlaI GCGC 1 cut(s) 762
GluI GCNGC 4 cut(s) 368, 371, 764, 1484
HaeII RGCGCY 1 cut(s) 764
HaeIII GGCC 2 cut(s) 726, 1308
HapII CCGG 2 cut(s) 723, 727
HgaI GACGC 1 cut(s) 516
HhaI GCGC 1 cut(s) 763
Hin1II CATG 6 cut(s) 10, 183, 784, 884, 1468, 1512
Hin6I GCGC 1 cut(s) 761
HinP1I GCGC 1 cut(s) 761
HindIII AAGCTT 4 cut(s) 112, 284, 428, 980
HinfI GANTC 3 cut(s) 235, 1490, 1529
HpaII CCGG 2 cut(s) 723, 727
HphI GGTGA 3 cut(s) 28, 110, 1333
Hpy166II GTNNAC 4 cut(s) 70, 362, 821, 976
Hpy188I TCNGA 8 cut(s) 139, 346, 436, 471, 691, 854, 1495, 1540
Hpy188III TCNNGA 7 cut(s) 92, 118, 173, 272, 574, 1190, 1448
Hpy8I GTNNAC 4 cut(s) 70, 362, 821, 976
Hpy99I CGWCG 1 cut(s) 1424
HpyAV CCTTC 6 cut(s) 158, 351, 702, 851, 1297, 1376
HpyCH4III ACNGT 4 cut(s) 67, 754, 830, 973
HpyF10VI GCNNNNNNNGC 1 cut(s) 292
HpyF3I CTNAG 7 cut(s) 277, 448, 470, 688, 745, 1099, 1494
Hsp92II CATG 6 cut(s) 10, 183, 784, 884, 1468, 1512
HspAI GCGC 1 cut(s) 761
KroI GCCGGC 1 cut(s) 726
KroNI GCCGGC 1 cut(s) 728
Ksp22I TGATCA 1 cut(s) 289
Kzo9I GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1369
LguI GCTCTTC 2 cut(s) 315, 1191
LmnI GCTCC 3 cut(s) 670, 758, 1063
Lsp1109I GCAGC 4 cut(s) 354, 382, 750, 1470
LweI GCATC 7 cut(s) 153, 576, 872, 1099, 1276, 1298, 1396
MaeI CTAG 1 cut(s) 1067
MaeIII GTNAC 5 cut(s) 461, 489, 514, 1339, 1517
MalI GATC 7 cut(s) 171, 177, 291, 661, 1047, 1148, 1371
MbiI CCGCTC 1 cut(s) 402
MboI GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1369
MboII GAAGA 8 cut(s) 143, 179, 302, 724, 891, 1178, 1431, 1463
MfeI CAATTG 1 cut(s) 867
MflI RGATCY 2 cut(s) 169, 659
MluI ACGCGT 1 cut(s) 525
MlyI GAGTC 1 cut(s) 244
MmeI TCCRAC 3 cut(s) 483, 526, 580
Mph1103I ATGCAT 1 cut(s) 1291
MroNI GCCGGC 1 cut(s) 726
MroXI GAANNNNTTC 2 cut(s) 430, 1185
MseI TTAA 5 cut(s) 110, 915, 1311, 1328, 1543
MspA1I CMGCKG 2 cut(s) 367, 1483
MspI CCGG 2 cut(s) 723, 727
MspR9I CCNGG 2 cut(s) 350, 1250
MunI CAATTG 1 cut(s) 867
MvaI CCWGG 2 cut(s) 350, 1250
MvnI CGCG 1 cut(s) 527
MwoI GCNNNNNNNGC 1 cut(s) 292
NaeI GCCGGC 1 cut(s) 728
NdeII GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1369
NgoMIV GCCGGC 1 cut(s) 726
NlaIII CATG 6 cut(s) 10, 183, 784, 884, 1468, 1512
NlaIV GGNNCC 1 cut(s) 1247
NmuCI GTSAC 3 cut(s) 489, 1339, 1517
NsiI ATGCAT 1 cut(s) 1291
NspI RCATGY 1 cut(s) 10
PciSI GCTCTTC 2 cut(s) 315, 1191
PdiI GCCGGC 1 cut(s) 728
PdmI GAANNNNTTC 2 cut(s) 430, 1185
PfeI GAWTC 2 cut(s) 1490, 1529
PkrI GCNGC 4 cut(s) 369, 372, 765, 1485
PleI GAGTC 1 cut(s) 243
PpsI GAGTC 1 cut(s) 243
PpuMI RGGWCCY 1 cut(s) 1246
Psp5II RGGWCCY 1 cut(s) 1246
Psp6I CCWGG 2 cut(s) 348, 1248
PspEI GGTNACC 1 cut(s) 1339
PspGI CCWGG 2 cut(s) 348, 1248
PspN4I GGNNCC 1 cut(s) 1247
PspPI GGNCC 4 cut(s) 548, 1246, 1306, 1477
PspPPI RGGWCCY 1 cut(s) 1246
PstI CTGCAG 1 cut(s) 372
PstNI CAGNNNCTG 1 cut(s) 752
PsuI RGATCY 2 cut(s) 169, 659
PvuII CAGCTG 2 cut(s) 367, 1483
RsaI GTAC 2 cut(s) 361, 977
RsaNI GTAC 2 cut(s) 360, 976
SapI GCTCTTC 2 cut(s) 315, 1191
SaqAI TTAA 5 cut(s) 110, 915, 1311, 1328, 1543
SatI GCNGC 4 cut(s) 368, 371, 764, 1484
Sau3AI GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1369
Sau96I GGNCC 4 cut(s) 548, 1246, 1306, 1477
SchI GAGTC 1 cut(s) 244
ScrFI CCNGG 2 cut(s) 350, 1250
SfaNI GCATC 7 cut(s) 153, 576, 872, 1099, 1276, 1298, 1396
SfcI CTRYAG 2 cut(s) 368, 753
SinI GGWCC 3 cut(s) 548, 1246, 1477
SmlI CTYRAG 3 cut(s) 232, 397, 1256
SmoI CTYRAG 3 cut(s) 232, 397, 1256
SsiI CCGC 5 cut(s) 402, 557, 618, 705, 1373
SspI AATATT 1 cut(s) 511
SspMI CTAG 1 cut(s) 1067
StyD4I CCNGG 2 cut(s) 348, 1248
TaaI ACNGT 4 cut(s) 67, 754, 830, 973
TaqI TCGA 1 cut(s) 1176
TaqII GACCGA 2 cut(s) 1294, 1470
TatI WGTACW 2 cut(s) 359, 975
TfiI GAWTC 2 cut(s) 1490, 1529
Tru1I TTAA 5 cut(s) 110, 915, 1311, 1328, 1543
Tru9I TTAA 5 cut(s) 110, 915, 1311, 1328, 1543
TscAI CASTG 6 cut(s) 161, 421, 498, 978, 1382, 1522
TseFI GTSAC 3 cut(s) 489, 1339, 1517
TseI GCWGC 4 cut(s) 367, 370, 763, 1483
Tsp45I GTSAC 3 cut(s) 489, 1339, 1517
TspDTI ATGAA 5 cut(s) 302, 869, 1046, 1194, 1285
TspGWI ACGGA 2 cut(s) 477, 1408
TspRI CASTG 6 cut(s) 161, 421, 498, 978, 1382, 1522
VpaK11BI GGWCC 3 cut(s) 548, 1246, 1477
XagI CCTNNNNNAGG 1 cut(s) 276
XapI RAATTY 4 cut(s) 670, 1071, 1105, 1330
XceI RCATGY 1 cut(s) 10
XcmI CCANNNNNNNNNTGG 1 cut(s) 1471
XmnI GAANNNNTTC 2 cut(s) 430, 1185
XspI CTAG 1 cut(s) 1067
Zsp2I ATGCAT 1 cut(s) 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.