Rh7AG282000

LRR receptor-like serine threonine-protein kinase FEI

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
30002448 .. 30009679
7232 bp
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UTR
Exon/CDS
Intron
Rh7AG282000.1

Sequence Viewer

Length: 1428 bp
ATGGGCATGTTTTTGGTGAAATGGAGAGGGCTGTGGCTTCTTTACATTCTACTGCTTTATATTACTGTGAACAAAGGCAGAGCTATCAGTCCTGATGGTGAGGCACTTTTAAGCTTCAGGACAGCAGTTGTTAGTTCAGATGGCATCCTTCTTCAGTGGAGACCAGAAGATCCTGATCCATGTAATTGGAAAGGAGTAAAATGTGAAAATAAAACCAAGAAAGTAATCTACTTGAGTCTTGCTGGTCATAAATTGAGTGGATTTATACCTCCTGACTTAGGGAAGCTTGATCAGCTAAAGATTTTAGCTCTTCATAACAACAACTTCTATGGAACTATTCCTTCAGACCTGGGGAATTGTACACAGCTGCAGCGAATATACTTGCAGGGTAATTACTTGAGCGGATTTATCCCCAGTGATTTGGGAAAGCTTTCTGACCTCCAATACTTAGATATTTCAAGTAACTCTCTGAGTGGAAGTATCCCTCCGTCACTGGGAAAGTTGGATAATATTGTTACTTTCAACGCGTCAAACAATTTTCTGGTTGGACCAATACCGCCCGATGGCATCCTCACGAACTTGCCTGAAAGCTCGTTTGTTGGAAATCGTGGTTTGTGCGGGAAACAAATCAATGTGGTATGCAAAGATGACAATGGAGGATCTGCTCCAAATTCCCAAACTCCAAACTCAGAACAAAGTCAAGGCGGAAGGAAGAAATACTCCGGCCGGCTACTAATTAGTGCCTCAGCAACTGTAGGAGCGCTGCTTCTGGTGGCTCTCATGTGTTTCTGGGGTTGCTTTCTGTATAAGAAGTTTGGTAAACTTGACGGTAAAGGTCTTGCAATGGATGTCAGAGAAGGTGCATCAATTGTTATGTTTCATGGAGATTTGCCATACTCTTCTAAAGACATTATTAAGAAATTAGAGACTTTGAATGAGGAACACATAATTGGTGTTGGGGGTTTTGGAACAGTGTACAAGCTTGCAATGGATGATGGCAATCTATTTGCACTAAAAAGAATTGTAAAGATGAACGAGGGCTTTGATCGTTTTTTTGAAAGGGAGCTAGAAATTCTTGGAAGTATAAAGCATCGCTACTTAGTGAATTTGAGGGGATACTGCAATTCTCCTACATCAAAGTTGTTGATCTATGATTTTCTATCTGGTGGAAGCCTCGATGAAGCTCTTCACGCAAGACAGTATAAGAGATTAAATTTTCTGGTCACCGAGGATAGGCAAAGAGACATTGTTGATCCGCAGTGTGAAGGAGTGCAAGCTGAAAGCCTTGATGCCTTGCTCTCCGTCGCCATACAATGTGTTTCTTCAAGTCCAGAAGACCGACCCACCATGCACAGGGTGGTCCAGCTGCTTGAATCTGAGGTTATGACACCATGCCCCAGTGACTTCTATGATTCCAACTCTGATTAA

Protein Analysis

475

Amino Acids

52.41

Weight (kDa)

6.41

Isoelectric Point (pI)

33.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 68 1.1e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 77 - 171 3.2e-06 Leucine-rich repeat region
Pkinase PF00069 313 - 417 2.7e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 314 - 400 7.8e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 402
AccII CGCG 1 cut(s) 527
AciI CCGC 5 cut(s) 402, 557, 618, 705, 1256
AclWI GGATC 4 cut(s) 164, 170, 667, 1247
AcoI YGGCCR 1 cut(s) 724
AcsI RAATTY 4 cut(s) 670, 1071, 1105, 1213
AcuI CTGAAG 3 cut(s) 100, 137, 327
AdeI CACNNNGTG 1 cut(s) 1357
AfaI GTAC 2 cut(s) 361, 977
AfeI AGCGCT 1 cut(s) 762
AfiI CCNNNNNNNGG 5 cut(s) 278, 494, 563, 1233, 1353
AflIII ACRYGT 1 cut(s) 525
AgsI TTSAA 6 cut(s) 459, 523, 934, 1058, 1326, 1373
AjnI CCWGG 1 cut(s) 348
AjuI GAANNNNNNNTTGG 2 cut(s) 933, 965
Alw26I GTCTC 3 cut(s) 154, 920, 1236
AlwI GGATC 4 cut(s) 164, 170, 667, 1247
AlwNI CAGNNNCTG 1 cut(s) 752
Aor51HI AGCGCT 1 cut(s) 762
AoxI GGCC 1 cut(s) 724
ApeKI GCWGC 4 cut(s) 367, 370, 763, 1366
ApoI RAATTY 4 cut(s) 670, 1071, 1105, 1213
Asp700I GAANNNNTTC 2 cut(s) 430, 1185
AspLEI GCGC 1 cut(s) 763
AspS9I GGNCC 2 cut(s) 548, 1360
AsuHPI GGTGA 3 cut(s) 28, 110, 1216
AvaII GGWCC 2 cut(s) 548, 1360
BbsI GAAGAC 1 cut(s) 1341
BbvCI CCTCAGC 1 cut(s) 745
BbvI GCAGC 4 cut(s) 354, 382, 750, 1353
BccI CCATC 4 cut(s) 89, 134, 557, 989
BciT130I CCWGG 1 cut(s) 350
BciVI GTATCC 2 cut(s) 491, 1109
BclI TGATCA 1 cut(s) 289
BcoDI GTCTC 3 cut(s) 154, 920, 1236
BfaI CTAG 1 cut(s) 1067
BfmI CTRYAG 2 cut(s) 368, 753
BfoI RGCGCY 1 cut(s) 764
BfuI GTATCC 2 cut(s) 491, 1109
BisI GCNGC 4 cut(s) 368, 371, 764, 1367
BlsI GCNGC 4 cut(s) 369, 372, 765, 1368
Bme1390I CCNGG 1 cut(s) 350
Bme18I GGWCC 2 cut(s) 548, 1360
BmgT120I GGNCC 2 cut(s) 548, 1360
BmrFI CCNGG 1 cut(s) 350
BmrI ACTGGG 3 cut(s) 408, 503, 1392
BmsI GCATC 5 cut(s) 153, 576, 872, 1099, 1279
BmuI ACTGGG 3 cut(s) 408, 503, 1392
BpiI GAAGAC 1 cut(s) 1341
Bpu10I CCTNAGC 1 cut(s) 745
BpuEI CTTGAG 2 cut(s) 253, 418
BsaBI GATNNNNATC 2 cut(s) 174, 999
BsaI GGTCTC 1 cut(s) 154
BsaJI CCNNGG 2 cut(s) 349, 1227
Bsc4I CCNNNNNNNGG 5 cut(s) 278, 494, 563, 1233, 1353
Bse118I RCCGGY 1 cut(s) 726
Bse1I ACTGG 3 cut(s) 414, 498, 1398
Bse3DI GCAATG 2 cut(s) 849, 993
Bse8I GATNNNNATC 2 cut(s) 174, 999
BseBI CCWGG 1 cut(s) 350
BseDI CCNNGG 2 cut(s) 349, 1227
BseGI GGATG 4 cut(s) 144, 567, 853, 997
BseJI GATNNNNATC 2 cut(s) 174, 999
BseLI CCNNNNNNNGG 5 cut(s) 278, 494, 563, 1233, 1353
BseMI GCAATG 2 cut(s) 849, 993
BseMII CTCAG 4 cut(s) 461, 702, 759, 1368
BseNI ACTGG 3 cut(s) 414, 498, 1398
BseX3I CGGCCG 1 cut(s) 724
BseXI GCAGC 4 cut(s) 354, 382, 750, 1353
Bsh1236I CGCG 1 cut(s) 527
Bsh1285I CGRYCG 1 cut(s) 727
BshFI GGCC 1 cut(s) 726
BsiEI CGRYCG 1 cut(s) 727
BsiSI CCGG 2 cut(s) 723, 727
BslI CCNNNNNNNGG 5 cut(s) 278, 494, 563, 1233, 1353
BsmAI GTCTC 3 cut(s) 154, 920, 1236
BsnI GGCC 1 cut(s) 726
Bso31I GGTCTC 1 cut(s) 154
Bsp1407I TGTACA 2 cut(s) 359, 975
Bsp143I GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1252
BspACI CCGC 5 cut(s) 402, 557, 618, 705, 1256
BspANI GGCC 1 cut(s) 726
BspCNI CTCAG 4 cut(s) 462, 701, 758, 1369
BspFNI CGCG 1 cut(s) 527
BspMAI CTGCAG 1 cut(s) 372
BspPI GGATC 4 cut(s) 164, 170, 667, 1247
BspQI GCTCTTC 2 cut(s) 315, 1191
BspTNI GGTCTC 1 cut(s) 154
BsrBI CCGCTC 1 cut(s) 402
BsrDI GCAATG 2 cut(s) 849, 993
BsrFI RCCGGY 1 cut(s) 726
BsrGI TGTACA 2 cut(s) 359, 975
BsrI ACTGG 3 cut(s) 414, 498, 1398
BssAI RCCGGY 1 cut(s) 726
BssECI CCNNGG 2 cut(s) 349, 1227
BssMI GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1252
Bst2UI CCWGG 1 cut(s) 350
Bst4CI ACNGT 5 cut(s) 67, 754, 830, 973, 1200
Bst6I CTCTTC 3 cut(s) 315, 904, 1191
BstAUI TGTACA 2 cut(s) 359, 975
BstC8I GCNNGC 3 cut(s) 728, 984, 1275
BstDEI CTNAG 7 cut(s) 277, 448, 470, 688, 745, 1099, 1377
BstEII GGTNACC 1 cut(s) 1222
BstENI CCTNNNNNAGG 1 cut(s) 276
BstF5I GGATG 4 cut(s) 144, 567, 853, 997
BstFNI CGCG 1 cut(s) 527
BstH2I RGCGCY 1 cut(s) 764
BstHHI GCGC 1 cut(s) 763
BstKTI GATC 7 cut(s) 172, 178, 292, 662, 1048, 1149, 1255
BstMAI GTCTC 3 cut(s) 154, 920, 1236
BstMBI GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1252
BstMCI CGRYCG 1 cut(s) 727
BstMWI GCNNNNNNNGC 2 cut(s) 292, 1190
BstNI CCWGG 1 cut(s) 350
BstNSI RCATGY 1 cut(s) 10
BstPI GGTNACC 1 cut(s) 1222
BstSCI CCNGG 1 cut(s) 348
BstSFI CTRYAG 2 cut(s) 368, 753
BstUI CGCG 1 cut(s) 527
BstV1I GCAGC 4 cut(s) 354, 382, 750, 1353
BstV2I GAAGAC 1 cut(s) 1341
BstX2I RGATCY 2 cut(s) 169, 659
BstXI CCANNNNNNTGG 2 cut(s) 186, 421
BstYI RGATCY 2 cut(s) 169, 659
BstZI CGGCCG 1 cut(s) 724
BsuI GTATCC 2 cut(s) 491, 1109
BsuRI GGCC 1 cut(s) 726
BtgZI GCGATG 1 cut(s) 1076
BtsCI GGATG 4 cut(s) 144, 567, 853, 997
BtsI GCAGTG 1 cut(s) 1265
BtsIMutI CAGTG 6 cut(s) 161, 421, 491, 978, 1265, 1405
Cac8I GCNNGC 3 cut(s) 728, 984, 1275
CaiI CAGNNNCTG 1 cut(s) 752
CfoI GCGC 1 cut(s) 763
Cfr10I RCCGGY 1 cut(s) 726
Cfr13I GGNCC 2 cut(s) 548, 1360
CseI GACGC 1 cut(s) 516
Csp6I GTAC 2 cut(s) 360, 976
CviAII CATG 6 cut(s) 7, 180, 781, 881, 1348, 1392
CviQI GTAC 2 cut(s) 360, 976
DdeI CTNAG 7 cut(s) 277, 448, 470, 688, 745, 1099, 1377
DpnI GATC 7 cut(s) 171, 177, 291, 661, 1047, 1148, 1254
DpnII GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1252
DraIII CACNNNGTG 1 cut(s) 1357
EaeI YGGCCR 1 cut(s) 724
EagI CGGCCG 1 cut(s) 724
Eam1104I CTCTTC 3 cut(s) 315, 904, 1191
EarI CTCTTC 3 cut(s) 315, 904, 1191
EciI GGCGGA 1 cut(s) 720
EclXI CGGCCG 1 cut(s) 724
Eco31I GGTCTC 1 cut(s) 154
Eco47I GGWCC 2 cut(s) 548, 1360
Eco47III AGCGCT 1 cut(s) 762
Eco52I CGGCCG 1 cut(s) 724
Eco57I CTGAAG 3 cut(s) 100, 137, 327
Eco91I GGTNACC 1 cut(s) 1222
EcoNI CCTNNNNNAGG 1 cut(s) 276
EcoO65I GGTNACC 1 cut(s) 1222
EcoRII CCWGG 1 cut(s) 348
FaeI CATG 6 cut(s) 10, 183, 784, 884, 1351, 1395
FatI CATG 6 cut(s) 6, 179, 780, 880, 1347, 1391
FauI CCCGC 1 cut(s) 611
FbaI TGATCA 1 cut(s) 289
Fnu4HI GCNGC 4 cut(s) 368, 371, 764, 1367
FokI GGATG 4 cut(s) 131, 554, 860, 1004
Fsp4HI GCNGC 4 cut(s) 368, 371, 764, 1367
FspBI CTAG 1 cut(s) 1067
GlaI GCGC 1 cut(s) 762
GluI GCNGC 4 cut(s) 368, 371, 764, 1367
HaeII RGCGCY 1 cut(s) 764
HaeIII GGCC 1 cut(s) 726
HapII CCGG 2 cut(s) 723, 727
HgaI GACGC 1 cut(s) 516
HhaI GCGC 1 cut(s) 763
Hin1II CATG 6 cut(s) 10, 183, 784, 884, 1351, 1395
Hin6I GCGC 1 cut(s) 761
HinP1I GCGC 1 cut(s) 761
HindIII AAGCTT 4 cut(s) 112, 284, 428, 980
HinfI GANTC 3 cut(s) 235, 1373, 1412
HpaII CCGG 2 cut(s) 723, 727
HphI GGTGA 3 cut(s) 28, 110, 1216
Hpy166II GTNNAC 4 cut(s) 70, 362, 821, 976
Hpy188I TCNGA 8 cut(s) 139, 346, 436, 471, 691, 854, 1378, 1423
Hpy188III TCNNGA 6 cut(s) 92, 118, 173, 272, 574, 1331
Hpy8I GTNNAC 4 cut(s) 70, 362, 821, 976
Hpy99I CGWCG 1 cut(s) 1307
HpyAV CCTTC 5 cut(s) 158, 351, 702, 851, 1259
HpyCH4III ACNGT 5 cut(s) 67, 754, 830, 973, 1200
HpyF10VI GCNNNNNNNGC 2 cut(s) 292, 1190
HpyF3I CTNAG 7 cut(s) 277, 448, 470, 688, 745, 1099, 1377
Hsp92II CATG 6 cut(s) 10, 183, 784, 884, 1351, 1395
HspAI GCGC 1 cut(s) 761
KroI GCCGGC 1 cut(s) 726
KroNI GCCGGC 1 cut(s) 728
Ksp22I TGATCA 1 cut(s) 289
Kzo9I GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1252
LguI GCTCTTC 2 cut(s) 315, 1191
LmnI GCTCC 3 cut(s) 670, 758, 1063
Lsp1109I GCAGC 4 cut(s) 354, 382, 750, 1353
LweI GCATC 5 cut(s) 153, 576, 872, 1099, 1279
MaeI CTAG 1 cut(s) 1067
MaeIII GTNAC 5 cut(s) 461, 489, 514, 1222, 1400
MalI GATC 7 cut(s) 171, 177, 291, 661, 1047, 1148, 1254
MbiI CCGCTC 1 cut(s) 402
MboI GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1252
MboII GAAGA 8 cut(s) 143, 179, 302, 724, 891, 1178, 1314, 1346
MfeI CAATTG 1 cut(s) 867
MflI RGATCY 2 cut(s) 169, 659
MluI ACGCGT 1 cut(s) 525
MlyI GAGTC 1 cut(s) 244
MmeI TCCRAC 3 cut(s) 483, 526, 580
MroNI GCCGGC 1 cut(s) 726
MroXI GAANNNNTTC 2 cut(s) 430, 1185
MseI TTAA 4 cut(s) 110, 915, 1211, 1426
MspA1I CMGCKG 2 cut(s) 367, 1366
MspI CCGG 2 cut(s) 723, 727
MspR9I CCNGG 1 cut(s) 350
MunI CAATTG 1 cut(s) 867
MvaI CCWGG 1 cut(s) 350
MvnI CGCG 1 cut(s) 527
MwoI GCNNNNNNNGC 2 cut(s) 292, 1190
NaeI GCCGGC 1 cut(s) 728
NdeII GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1252
NgoMIV GCCGGC 1 cut(s) 726
NlaIII CATG 6 cut(s) 10, 183, 784, 884, 1351, 1395
NmuCI GTSAC 3 cut(s) 489, 1222, 1400
NspI RCATGY 1 cut(s) 10
PciSI GCTCTTC 2 cut(s) 315, 1191
PdiI GCCGGC 1 cut(s) 728
PdmI GAANNNNTTC 2 cut(s) 430, 1185
PfeI GAWTC 2 cut(s) 1373, 1412
PkrI GCNGC 4 cut(s) 369, 372, 765, 1368
PleI GAGTC 1 cut(s) 243
PpsI GAGTC 1 cut(s) 243
Psp6I CCWGG 1 cut(s) 348
PspEI GGTNACC 1 cut(s) 1222
PspGI CCWGG 1 cut(s) 348
PspPI GGNCC 2 cut(s) 548, 1360
PstI CTGCAG 1 cut(s) 372
PstNI CAGNNNCTG 1 cut(s) 752
PsuI RGATCY 2 cut(s) 169, 659
PvuII CAGCTG 2 cut(s) 367, 1366
RsaI GTAC 2 cut(s) 361, 977
RsaNI GTAC 2 cut(s) 360, 976
SapI GCTCTTC 2 cut(s) 315, 1191
SaqAI TTAA 4 cut(s) 110, 915, 1211, 1426
SatI GCNGC 4 cut(s) 368, 371, 764, 1367
Sau3AI GATC 7 cut(s) 169, 175, 289, 659, 1045, 1146, 1252
Sau96I GGNCC 2 cut(s) 548, 1360
SchI GAGTC 1 cut(s) 244
ScrFI CCNGG 1 cut(s) 350
SfaNI GCATC 5 cut(s) 153, 576, 872, 1099, 1279
SfcI CTRYAG 2 cut(s) 368, 753
SinI GGWCC 2 cut(s) 548, 1360
SmlI CTYRAG 2 cut(s) 232, 397
SmoI CTYRAG 2 cut(s) 232, 397
SsiI CCGC 5 cut(s) 402, 557, 618, 705, 1256
SspI AATATT 1 cut(s) 511
SspMI CTAG 1 cut(s) 1067
StyD4I CCNGG 1 cut(s) 348
TaaI ACNGT 5 cut(s) 67, 754, 830, 973, 1200
TaqI TCGA 1 cut(s) 1176
TaqII GACCGA 1 cut(s) 1353
TatI WGTACW 2 cut(s) 359, 975
TfiI GAWTC 2 cut(s) 1373, 1412
Tru1I TTAA 4 cut(s) 110, 915, 1211, 1426
Tru9I TTAA 4 cut(s) 110, 915, 1211, 1426
TscAI CASTG 6 cut(s) 161, 421, 498, 978, 1265, 1405
TseFI GTSAC 3 cut(s) 489, 1222, 1400
TseI GCWGC 4 cut(s) 367, 370, 763, 1366
Tsp45I GTSAC 3 cut(s) 489, 1222, 1400
TspDTI ATGAA 4 cut(s) 302, 869, 1046, 1194
TspGWI ACGGA 2 cut(s) 477, 1291
TspRI CASTG 6 cut(s) 161, 421, 498, 978, 1265, 1405
VpaK11BI GGWCC 2 cut(s) 548, 1360
XagI CCTNNNNNAGG 1 cut(s) 276
XapI RAATTY 4 cut(s) 670, 1071, 1105, 1213
XceI RCATGY 1 cut(s) 10
XcmI CCANNNNNNNNNTGG 1 cut(s) 1354
XmnI GAANNNNTTC 2 cut(s) 430, 1185
XspI CTAG 1 cut(s) 1067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.