Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0007133

Physical Location & Seq

Genomic Coordinates Forward (+)

50831594 .. 50838699

Gene Structure 7106 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00256450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGCTTCGTCGGAGGAGGAACCACCGCAGCAGAGCCAAGAACCACCGCAGCAGCCACAGTCAGTGAAAGACTGTCTTCACAAGACCAAGCTCATTCAATTCTTGGGCCGCACCGCCCCTATCGTCCTCCAGAACGACAATGGTCCCTGCCCTCTCCTCGCCATCTGTAATGTTCTCTCCTTGAGAAACAACCTGAATTTGAGTGCAGACACTACAGAAGTCTCTCAAGAAAAGTTACTCTCACTCGTTGCTGAAAGATTAATTGATTCTAACAGTAATATTGATAATAAAGATGCTGGCTATGTTGAAAACCAACAGCAGAACATATCCGATGCTATCGATCTACTCCCTCGACTTGCAACTGGAATCGATGTTAACATAAAATTCAGAAGGATAAGTGATTTTGAGTTTACTCCAGAATGTGCAATATTTGATCTGTTAGACATCCCACTATATCATGGCTGGATAGTTGATCCCCAGGACCATGATACTGCTAATGCAATTGGGTCGAAGTCCTATAACACTCTTATGGGGGAGCTTGTTGCACTGGAAACACAAAATATGGAGAGTGAGTCTAAGGGGAAGAATATTCCTCAAGAAGATTGTGTTGATTTTGTTGCTGCAACAACTGCAACACTTGGTGTTCCTTCTCCAAGCCTTTCTAAAACTAGATCTTTTGATGAGTCTCCACATTCAGCTTCTGATGAACCAAAGGTAAGGAAAGGAGACCGTGAAGAAGAAGCAGAGTTGCGGATGGCTTTACAAATGTCTAAGGCTGAGCTTCCGACTTCAGTGGGTGATCCATTTGCAGCAAGTATTGACGCATCGCCTCTGTTAGTTAGTTCAGATGAAAGCACTCATCTTGAGAAGGTTATGCCTGTAGGTTCTGTAGATAAATCCGAAAAACATGATGCTGAATGCAGTAATTCTATTCAGTCAGAACTGTCTGTACCAGATAACATTGCCCCCAGGAACGAGAGTAGTGATCTGATATCTTTTGAAACTGCTCCAGGGCAAACAGCATGTTCATCCTGGTTGGAGACGACTGAGGTGAACAATAATGGTCAGCCAACTTCTGTGAAATCAGAAGATCTTCCTAAGGATTTGGTTACAAAAAGCACAGGAAACGAATCAGACCAGATTAAAGGTGCAGTTTCTTTTAGTCCTGAGAGAAATAATGAATCCATAGATGGGAACCATACAGATGTTTCAAAAGGGGGTGAAAAATTTGAGGATCAGGTCAAGCTTGCAACTATTGCTGATGGAATTGTAGAAATAAATAAGCAAATTGGGAGCAATATGACAGAGGTTCCTTGCTTATCTGCTTCAAATGTGGGTTCAGATTCATCTAGTGGCAGAATACTTGAAATTGATGAATCGGAAACTTTGACGTCAAGTGGTGAAGGCAGTGAGCCCATCTATGAAGGAGAGGAGCGTATTTTGGATTCAGGCACAACTGTTTCTGAACAAAGAGAGCCTGTATATGAAGGTGAGGCAGTGCTTGCAAAGCAAGCAGACAAAGGGATGCTAGATGCAAGGTCAAAGGATGAAATCACTCCACAAGAAGGGGAATTGATCAGGAATTTTTTGAAGAACAATGCTAGTCAATTGACTTTCTCCGGCCTTTTCTGCTTACAAGAGGGCCTTAAAGAGAGGGAGCTCTGTGTTTTCTTTCGAAACAACCACTTCAGTACCATGTTTAAGATCAATGGAGAGCTTTATCTTTTGGCTACTGATCAGGGTTACCTGAATCAGCATGATTTGGTGTGGGAAAAGCTTAATGAGGTGAATGGAGATACATTGTTCATGACTGGCAACTTCAAGGAATTTAAAGTTGAAAGCCAATCAAATGAAAATTGGGATGAAAATAATGCTGTTACCAGCACTGCGGACTACCTTGCGAGCATTGATAGTGCAGATTCAGCAGGCTTCGATCTAAATTCTGATCTGCAATTGGCAATTGCTCTGCAACAACAGGAGTTTGAACAGCAACCACAACAACAACAGCAACGACAAAACGTGCAGCAACCATCTATTAGCGGCAATTCAAGGATGGTCACAGGTCCCCAGGTGCCAAGACATAACGTCAGAACTTCTACAACATCCTCTTCTCCAAGACCTGAAAAGCCCAAGGAAAAGTGTATTATTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MINDY_DUB

Protein Analysis

717

Amino Acids

78.69

Weight (kDa)

4.46

Isoelectric Point (pI)

50.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MINDY_DUB	PF04424	27 - 194	1.1e-54	MINDY deubiquitinase
MINDY_DUB	PF04424	504 - 607	9.7e-37	MINDY deubiquitinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11860
fragaria_vesca	FvH4_5g01250 FvH4_5g01250 FvH4_5g01250 FvH4_5g01250
malus_domestica	MD04G1069800.v1.1 MD04G1069900.v1.1 MD06G1071200.v1.1 MD06G1071400.v1.1
prunus_persica	Prupe.5G088000_v2.0.a1 Prupe.5G088000_v2.0.a1 Prupe.5G088000_v2.0.a1
pyrus_communis	pycom04g06350
rosa_chinensis	RchiOBHm_Chr7g0199771
rosa_laevigata	RLG00000003771
rosa_multiflora	Rmu_sc0002748.1_g000020
rosa_roxburghii	Rroxscaffold_3G00256450
rosa_rugosa	Rorug07G0056200 Rorug07G0056300 Rorug07G0056300
rosa_samantha	Rh7AG181600 Rh7BG184400 Rh7CG191200 Rh7DG184400
rosa_wichuraiana	Rw7G015920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1394
AccB1I	GGYRCC	1 cut(s)	2071
AciI	CCGC	7 cut(s)	26, 47, 109, 114, 751, 1889, 2040
AclWI	GGATC	3 cut(s)	467, 794, 1242
AcsI	RAATTY	6 cut(s)	196, 383, 1226, 1582, 1826, 1939
AcuI	CTGAAG	2 cut(s)	774, 1672
AcyI	GRCGYC	1 cut(s)	1391
AdeI	CACNNNGTG	1 cut(s)	641
AfaI	GTAC	2 cut(s)	951, 1693
AfiI	CCNNNNNNNGG	2 cut(s)	1191, 1565
AhdI	GACNNNNNGTC	1 cut(s)	2084
AjnI	CCWGG	5 cut(s)	477, 968, 1009, 1031, 2067
AluBI	AGCT	8 cut(s)	91, 538, 698, 781, 1246, 1660, 1717, 1777
AluI	AGCT	8 cut(s)	91, 538, 698, 781, 1246, 1660, 1717, 1777
Alw21I	GWGCWC	1 cut(s)	1662
Alw26I	GTCTC	4 cut(s)	226, 690, 720, 1034
AlwI	GGATC	3 cut(s)	467, 794, 1242
AlwNI	CAGNNNCTG	1 cut(s)	701
AoxI	GGCC	3 cut(s)	106, 1621, 1642
ApeKI	GCWGC	6 cut(s)	28, 49, 52, 620, 809, 2023
ApoI	RAATTY	6 cut(s)	196, 383, 1226, 1582, 1826, 1939
AseI	ATTAAT	1 cut(s)	260
Asp700I	GAANNNNTTC	1 cut(s)	1092
AspS9I	GGNCC	5 cut(s)	106, 143, 481, 1642, 2063
AsuHPI	GGTGA	6 cut(s)	809, 1063, 1232, 1412, 1502, 1798
AsuII	TTCGAA	1 cut(s)	1675
AvaII	GGWCC	3 cut(s)	143, 481, 2063
AxyI	CCTNAGG	1 cut(s)	1098
BaeI	ACNNNNGTAYC	2 cut(s)	1675, 1708
BanI	GGYRCC	1 cut(s)	2071
BanII	GRGCYC	2 cut(s)	1416, 1662
BbsI	GAAGAC	1 cut(s)	68
Bbv12I	GWGCWC	1 cut(s)	1662
BbvI	GCAGC	6 cut(s)	40, 61, 64, 607, 821, 2035
BccI	CCATC	7 cut(s)	170, 748, 1184, 1256, 1424, 2038, 2047
BcgI	CGANNNNNNTGC	2 cut(s)	489, 523
BciT130I	CCWGG	5 cut(s)	479, 970, 1011, 1033, 2069
BclI	TGATCA	2 cut(s)	1575, 1735
BcoDI	GTCTC	4 cut(s)	226, 690, 720, 1034
BfaI	CTAG	4 cut(s)	669, 1350, 1529, 1602
BfmI	CTRYAG	3 cut(s)	213, 879, 888
BglII	AGATCT	2 cut(s)	671, 1090
BisI	GCNGC	8 cut(s)	29, 50, 53, 109, 621, 810, 2024, 2041
BlpI	GCTNAGC	1 cut(s)	777
BlsI	GCNGC	8 cut(s)	30, 51, 54, 110, 622, 811, 2025, 2042
Bme1390I	CCNGG	5 cut(s)	479, 970, 1011, 1033, 2069
Bme18I	GGWCC	3 cut(s)	143, 481, 2063
BmeRI	GACNNNNNGTC	1 cut(s)	2084
BmgT120I	GGNCC	5 cut(s)	106, 143, 481, 1642, 2063
BmiI	GGNNCC	6 cut(s)	21, 145, 1196, 1311, 2065, 2073
BmrFI	CCNGG	5 cut(s)	479, 970, 1011, 1033, 2069
BmsI	GCATC	6 cut(s)	283, 322, 833, 901, 1515, 1522
BoxI	GACNNNNGTC	1 cut(s)	141
BpiI	GAAGAC	1 cut(s)	68
BpmI	CTGGAG	3 cut(s)	113, 399, 993
Bpu1102I	GCTNAGC	1 cut(s)	777
Bpu14I	TTCGAA	1 cut(s)	1675
BpuEI	CTTGAG	4 cut(s)	202, 210, 579, 884
Bsa29I	ATCGAT	2 cut(s)	339, 369
BsaHI	GRCGYC	1 cut(s)	1391
BsaI	GGTCTC	1 cut(s)	720
BsaJI	CCNNGG	5 cut(s)	477, 968, 1010, 2067, 2130
BsaXI	ACNNNNNCTCC	2 cut(s)	557, 587
Bsc4I	CCNNNNNNNGG	2 cut(s)	1191, 1565
Bse1I	ACTGG	3 cut(s)	367, 552, 1816
Bse21I	CCTNAGG	1 cut(s)	1098
Bse3DI	GCAATG	1 cut(s)	960
BseBI	CCWGG	5 cut(s)	479, 970, 1011, 1033, 2069
BseCI	ATCGAT	2 cut(s)	339, 369
BseDI	CCNNGG	5 cut(s)	477, 968, 1010, 2067, 2130
BseGI	GGATG	8 cut(s)	444, 759, 1028, 1530, 1552, 1867, 2058, 2102
BseLI	CCNNNNNNNGG	2 cut(s)	1191, 1565
BseMI	GCAATG	1 cut(s)	960
BseMII	CTCAG	3 cut(s)	768, 1038, 1158
BseNI	ACTGG	3 cut(s)	367, 552, 1816
BseRI	GAGGAG	3 cut(s)	29, 146, 1445
BseXI	GCAGC	6 cut(s)	40, 61, 64, 607, 821, 2035
BsgI	GTGCAG	4 cut(s)	225, 1170, 1935, 2042
BshFI	GGCC	3 cut(s)	108, 1623, 1644
BshNI	GGYRCC	1 cut(s)	2071
BshVI	ATCGAT	2 cut(s)	339, 369
BsiHKAI	GWGCWC	1 cut(s)	1662
BsiSI	CCGG	1 cut(s)	1620
BslFI	GGGAC	2 cut(s)	129, 2049
BslI	CCNNNNNNNGG	2 cut(s)	1191, 1565
BsmAI	GTCTC	4 cut(s)	226, 690, 720, 1034
BsmBI	CGTCTC	1 cut(s)	1034
BsmFI	GGGAC	2 cut(s)	129, 2049
BsmI	GAATGC	1 cut(s)	923
BsnI	GGCC	3 cut(s)	108, 1623, 1644
Bso31I	GGTCTC	1 cut(s)	720
Bsp119I	TTCGAA	1 cut(s)	1675
Bsp1286I	GDGCHC	2 cut(s)	1416, 1662
Bsp1720I	GCTNAGC	1 cut(s)	777
BspACI	CCGC	7 cut(s)	26, 47, 109, 114, 751, 1889, 2040
BspANI	GGCC	3 cut(s)	108, 1623, 1644
BspCNI	CTCAG	3 cut(s)	769, 1039, 1159
BspDI	ATCGAT	2 cut(s)	339, 369
BspHI	TCATGA	1 cut(s)	1806
BspLI	GGNNCC	6 cut(s)	21, 145, 1196, 1311, 2065, 2073
BspPI	GGATC	3 cut(s)	467, 794, 1242
BspT104I	TTCGAA	1 cut(s)	1675
BspT107I	GGYRCC	1 cut(s)	2071
BspTNI	GGTCTC	1 cut(s)	720
BsrDI	GCAATG	1 cut(s)	960
BsrI	ACTGG	3 cut(s)	367, 552, 1816
BssECI	CCNNGG	5 cut(s)	477, 968, 1010, 2067, 2130
BssNI	GRCGYC	1 cut(s)	1391
BssT1I	CCWWGG	1 cut(s)	2130
Bst2UI	CCWGG	5 cut(s)	479, 970, 1011, 1033, 2069
Bst4CI	ACNGT	6 cut(s)	60, 74, 275, 731, 945, 1459
Bst6I	CTCTTC	1 cut(s)	2113
BstACI	GRCGYC	1 cut(s)	1391
BstAPI	GCANNNNNTGC	3 cut(s)	629, 1256, 1502
BstBI	TTCGAA	1 cut(s)	1675
BstC8I	GCNNGC	6 cut(s)	298, 1248, 1503, 1512, 1903, 1927
BstDEI	CTNAG	6 cut(s)	576, 771, 777, 1047, 1098, 1167
BstEII	GGTNACC	1 cut(s)	1742
BstF5I	GGATG	8 cut(s)	444, 759, 1028, 1530, 1552, 1867, 2058, 2102
BstMAI	GTCTC	4 cut(s)	226, 690, 720, 1034
BstMWI	GCNNNNNNNGC	7 cut(s)	629, 1256, 1502, 1507, 1511, 1629, 1922
BstNI	CCWGG	5 cut(s)	479, 970, 1011, 1033, 2069
BstNSI	RCATGY	1 cut(s)	1026
BstPAI	GACNNNNGTC	1 cut(s)	141
BstPI	GGTNACC	1 cut(s)	1742
BstSCI	CCNGG	5 cut(s)	477, 968, 1009, 1031, 2067
BstSFI	CTRYAG	3 cut(s)	213, 879, 888
BstV1I	GCAGC	6 cut(s)	40, 61, 64, 607, 821, 2035
BstV2I	GAAGAC	1 cut(s)	68
BstX2I	RGATCY	2 cut(s)	671, 1090
BstYI	RGATCY	2 cut(s)	671, 1090
Bsu15I	ATCGAT	2 cut(s)	339, 369
Bsu36I	CCTNAGG	1 cut(s)	1098
BsuRI	GGCC	3 cut(s)	108, 1623, 1644
BsuTUI	ATCGAT	2 cut(s)	339, 369
BtgZI	GCGATG	1 cut(s)	810
BtsCI	GGATG	8 cut(s)	444, 759, 1028, 1530, 1552, 1867, 2058, 2102
BtsI	GCAGTG	3 cut(s)	1414, 1503, 1884
BtsIMutI	CAGTG	6 cut(s)	69, 545, 798, 1414, 1503, 1884
Cac8I	GCNNGC	6 cut(s)	298, 1248, 1503, 1512, 1903, 1927
CaiI	CAGNNNCTG	1 cut(s)	701
CciI	TCATGA	1 cut(s)	1806
Cfr13I	GGNCC	5 cut(s)	106, 143, 481, 1642, 2063
ClaI	ATCGAT	2 cut(s)	339, 369
CseI	GACGC	1 cut(s)	830
Csp6I	GTAC	2 cut(s)	950, 1692
CviAII	CATG	7 cut(s)	458, 485, 908, 1023, 1696, 1757, 1807
CviQI	GTAC	2 cut(s)	950, 1692
DdeI	CTNAG	6 cut(s)	576, 771, 777, 1047, 1098, 1167
DraI	TTTAAA	1 cut(s)	1831
DraIII	CACNNNGTG	1 cut(s)	641
DriI	GACNNNNNGTC	1 cut(s)	2084
Eam1104I	CTCTTC	1 cut(s)	2113
Eam1105I	GACNNNNNGTC	1 cut(s)	2084
EarI	CTCTTC	1 cut(s)	2113
Ecl136II	GAGCTC	1 cut(s)	1660
Eco130I	CCWWGG	1 cut(s)	2130
Eco24I	GRGCYC	2 cut(s)	1416, 1662
Eco31I	GGTCTC	1 cut(s)	720
Eco32I	GATATC	1 cut(s)	993
Eco47I	GGWCC	3 cut(s)	143, 481, 2063
Eco53kI	GAGCTC	1 cut(s)	1660
Eco57I	CTGAAG	2 cut(s)	774, 1672
Eco81I	CCTNAGG	1 cut(s)	1098
Eco91I	GGTNACC	1 cut(s)	1742
EcoICRI	GAGCTC	1 cut(s)	1660
EcoO109I	RGGNCCY	2 cut(s)	1642, 2063
EcoO65I	GGTNACC	1 cut(s)	1742
EcoRII	CCWGG	5 cut(s)	477, 968, 1009, 1031, 2067
EcoRV	GATATC	1 cut(s)	993
EcoT14I	CCWWGG	1 cut(s)	2130
EcoT38I	GRGCYC	2 cut(s)	1416, 1662
ErhI	CCWWGG	1 cut(s)	2130
Esp3I	CGTCTC	1 cut(s)	1034
FaeI	CATG	7 cut(s)	461, 488, 911, 1026, 1699, 1760, 1810
FalI	AAGNNNNNCTT	4 cut(s)	60, 92, 1629, 1661
FaqI	GGGAC	2 cut(s)	129, 2049
FatI	CATG	7 cut(s)	457, 484, 907, 1022, 1695, 1756, 1806
FbaI	TGATCA	2 cut(s)	1575, 1735
Fnu4HI	GCNGC	8 cut(s)	29, 50, 53, 109, 621, 810, 2024, 2041
FokI	GGATG	8 cut(s)	431, 766, 1015, 1537, 1559, 1874, 2065, 2089
FriOI	GRGCYC	2 cut(s)	1416, 1662
Fsp4HI	GCNGC	8 cut(s)	29, 50, 53, 109, 621, 810, 2024, 2041
FspBI	CTAG	4 cut(s)	669, 1350, 1529, 1602
GluI	GCNGC	8 cut(s)	29, 50, 53, 109, 621, 810, 2024, 2041
GsuI	CTGGAG	3 cut(s)	113, 399, 993
HaeIII	GGCC	3 cut(s)	108, 1623, 1644
HapII	CCGG	1 cut(s)	1620
HgaI	GACGC	1 cut(s)	830
Hin1I	GRCGYC	1 cut(s)	1391
Hin1II	CATG	7 cut(s)	461, 488, 911, 1026, 1699, 1760, 1810
HincII	GTYRAC	1 cut(s)	376
HindII	GTYRAC	1 cut(s)	376
HindIII	AAGCTT	2 cut(s)	1244, 1775
HpaI	GTTAAC	1 cut(s)	376
HpaII	CCGG	1 cut(s)	1620
HphI	GGTGA	6 cut(s)	809, 1063, 1232, 1412, 1502, 1798
Hpy166II	GTNNAC	3 cut(s)	376, 411, 1054
Hpy188III	TCNNGA	8 cut(s)	130, 227, 416, 596, 863, 1166, 1579, 1807
Hpy8I	GTNNAC	3 cut(s)	376, 411, 1054
Hpy99I	CGWCG	1 cut(s)	13
HpyAV	CCTTC	7 cut(s)	384, 657, 862, 1397, 1418, 1481, 1559
HpyCH4III	ACNGT	6 cut(s)	60, 74, 275, 731, 945, 1459
HpyCH4IV	ACGT	3 cut(s)	1391, 2019, 2085
HpyF10VI	GCNNNNNNNGC	7 cut(s)	629, 1256, 1502, 1507, 1511, 1629, 1922
HpyF3I	CTNAG	6 cut(s)	576, 771, 777, 1047, 1098, 1167
HpySE526I	ACGT	3 cut(s)	1391, 2019, 2085
Hsp92I	GRCGYC	1 cut(s)	1391
Hsp92II	CATG	7 cut(s)	461, 488, 911, 1026, 1699, 1760, 1810
Ksp22I	TGATCA	2 cut(s)	1575, 1735
KspAI	GTTAAC	1 cut(s)	376
LmnI	GCTCC	5 cut(s)	535, 1012, 1293, 1432, 1657
Lsp1109I	GCAGC	6 cut(s)	40, 61, 64, 607, 821, 2035
LweI	GCATC	6 cut(s)	283, 322, 833, 901, 1515, 1522
MaeI	CTAG	4 cut(s)	669, 1350, 1529, 1602
MaeII	ACGT	3 cut(s)	1391, 2019, 2085
MaeIII	GTNAC	5 cut(s)	234, 1108, 1742, 1876, 2056
MboII	GAAGA	9 cut(s)	68, 595, 611, 746, 749, 1085, 1100, 1603, 2100
MfeI	CAATTG	4 cut(s)	501, 1607, 1952, 1959
MflI	RGATCY	2 cut(s)	671, 1090
MhlI	GDGCHC	2 cut(s)	1416, 1662
MlyI	GAGTC	2 cut(s)	581, 692
MmeI	TCCRAC	2 cut(s)	809, 1017
MroXI	GAANNNNTTC	1 cut(s)	1092
MseI	TTAA	7 cut(s)	260, 375, 1143, 1647, 1701, 1779, 1830
MslI	CAYNNNNRTG	2 cut(s)	527, 1203
MspI	CCGG	1 cut(s)	1620
MspR9I	CCNGG	5 cut(s)	479, 970, 1011, 1033, 2069
MunI	CAATTG	4 cut(s)	501, 1607, 1952, 1959
Mva1269I	GAATGC	1 cut(s)	923
MvaI	CCWGG	5 cut(s)	479, 970, 1011, 1033, 2069
MwoI	GCNNNNNNNGC	7 cut(s)	629, 1256, 1502, 1507, 1511, 1629, 1922
NlaIII	CATG	7 cut(s)	461, 488, 911, 1026, 1699, 1760, 1810
NlaIV	GGNNCC	6 cut(s)	21, 145, 1196, 1311, 2065, 2073
NmuCI	GTSAC	1 cut(s)	2056
NspI	RCATGY	1 cut(s)	1026
NspV	TTCGAA	1 cut(s)	1675
PagI	TCATGA	1 cut(s)	1806
PctI	GAATGC	1 cut(s)	923
PdmI	GAANNNNTTC	1 cut(s)	1092
PfeI	GAWTC	9 cut(s)	266, 366, 1130, 1181, 1343, 1376, 1445, 1750, 1919
PkrI	GCNGC	8 cut(s)	30, 51, 54, 110, 622, 811, 2025, 2042
PleI	GAGTC	2 cut(s)	580, 691
PpsI	GAGTC	2 cut(s)	580, 691
PpuMI	RGGWCCY	1 cut(s)	2063
PshAI	GACNNNNGTC	1 cut(s)	141
PshBI	ATTAAT	1 cut(s)	260
Psp124BI	GAGCTC	1 cut(s)	1662
Psp5II	RGGWCCY	1 cut(s)	2063
Psp6I	CCWGG	5 cut(s)	477, 968, 1009, 1031, 2067
PspEI	GGTNACC	1 cut(s)	1742
PspGI	CCWGG	5 cut(s)	477, 968, 1009, 1031, 2067
PspN4I	GGNNCC	6 cut(s)	21, 145, 1196, 1311, 2065, 2073
PspPI	GGNCC	5 cut(s)	106, 143, 481, 1642, 2063
PspPPI	RGGWCCY	1 cut(s)	2063
PsrI	GAACNNNNNNTAC	2 cut(s)	933, 965
PstNI	CAGNNNCTG	1 cut(s)	701
PsuI	RGATCY	2 cut(s)	671, 1090
RsaI	GTAC	2 cut(s)	951, 1693
RsaNI	GTAC	2 cut(s)	950, 1692
RseI	CAYNNNNRTG	2 cut(s)	527, 1203
SacI	GAGCTC	1 cut(s)	1662
SaqAI	TTAA	7 cut(s)	260, 375, 1143, 1647, 1701, 1779, 1830
SatI	GCNGC	8 cut(s)	29, 50, 53, 109, 621, 810, 2024, 2041
Sau96I	GGNCC	5 cut(s)	106, 143, 481, 1642, 2063
SchI	GAGTC	2 cut(s)	581, 692
ScrFI	CCNGG	5 cut(s)	479, 970, 1011, 1033, 2069
SduI	GDGCHC	2 cut(s)	1416, 1662
SfaNI	GCATC	6 cut(s)	283, 322, 833, 901, 1515, 1522
SfcI	CTRYAG	3 cut(s)	213, 879, 888
SfuI	TTCGAA	1 cut(s)	1675
SinI	GGWCC	3 cut(s)	143, 481, 2063
SmiMI	CAYNNNNRTG	2 cut(s)	527, 1203
SmlI	CTYRAG	4 cut(s)	181, 225, 594, 863
SmoI	CTYRAG	4 cut(s)	181, 225, 594, 863
SsiI	CCGC	7 cut(s)	26, 47, 109, 114, 751, 1889, 2040
SspI	AATATT	3 cut(s)	280, 429, 589
SspMI	CTAG	4 cut(s)	669, 1350, 1529, 1602
SstI	GAGCTC	1 cut(s)	1662
StyD4I	CCNGG	5 cut(s)	477, 968, 1009, 1031, 2067
StyI	CCWWGG	1 cut(s)	2130
TaaI	ACNGT	6 cut(s)	60, 74, 275, 731, 945, 1459
TaiI	ACGT	3 cut(s)	1394, 2022, 2088
TaqI	TCGA	6 cut(s)	339, 352, 369, 509, 1675, 1932
TauI	GCSGC	2 cut(s)	111, 2043
TfiI	GAWTC	9 cut(s)	266, 366, 1130, 1181, 1343, 1376, 1445, 1750, 1919
Tru1I	TTAA	7 cut(s)	260, 375, 1143, 1647, 1701, 1779, 1830
Tru9I	TTAA	7 cut(s)	260, 375, 1143, 1647, 1701, 1779, 1830
TscAI	CASTG	6 cut(s)	69, 552, 798, 1414, 1503, 1891
TseFI	GTSAC	1 cut(s)	2056
TseI	GCWGC	6 cut(s)	28, 49, 52, 620, 809, 2023
Tsp45I	GTSAC	1 cut(s)	2056
TspRI	CASTG	6 cut(s)	69, 552, 798, 1414, 1503, 1891
VpaK11BI	GGWCC	3 cut(s)	143, 481, 2063
VspI	ATTAAT	1 cut(s)	260
XapI	RAATTY	6 cut(s)	196, 383, 1226, 1582, 1826, 1939
XceI	RCATGY	1 cut(s)	1026
XcmI	CCANNNNNNNNNTGG	1 cut(s)	137
XmnI	GAANNNNTTC	1 cut(s)	1092
XspI	CTAG	4 cut(s)	669, 1350, 1529, 1602
ZraI	GACGTC	1 cut(s)	1392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.