MINDY deubiquitinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G11860 |
| fragaria_vesca | FvH4_5g01250 FvH4_5g01250 FvH4_5g01250 FvH4_5g01250 |
| malus_domestica | MD04G1069800.v1.1 MD04G1069900.v1.1 MD06G1071200.v1.1 MD06G1071400.v1.1 |
| prunus_persica | Prupe.5G088000_v2.0.a1 Prupe.5G088000_v2.0.a1 Prupe.5G088000_v2.0.a1 |
| pyrus_communis | pycom04g06350 |
| rosa_chinensis | RchiOBHm_Chr7g0199771 |
| rosa_laevigata | RLG00000003771 |
| rosa_multiflora | Rmu_sc0002748.1_g000020 |
| rosa_roxburghii | Rroxscaffold_3G00256450 |
| rosa_rugosa | Rorug07G0056200 Rorug07G0056300 Rorug07G0056300 |
| rosa_samantha | Rh7AG181600 Rh7BG184400 Rh7CG191200 Rh7DG184400 |
| rosa_wichuraiana | Rw7G015920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 160 |
| AcoI | YGGCCR | 1 cut(s) | 43 |
| AcvI | CACGTG | 4 cut(s) | 25, 51, 83, 109 |
| AflIII | ACRYGT | 5 cut(s) | 24, 48, 82, 106, 108 |
| AgsI | TTSAA | 1 cut(s) | 37 |
| AleI | CACNNNNGTG | 1 cut(s) | 109 |
| AluBI | AGCT | 1 cut(s) | 156 |
| AluI | AGCT | 1 cut(s) | 156 |
| Alw21I | GWGCWC | 1 cut(s) | 56 |
| AoxI | GGCC | 1 cut(s) | 43 |
| AsuHPI | GGTGA | 2 cut(s) | 48, 54 |
| BalI | TGGCCA | 1 cut(s) | 45 |
| BbrPI | CACGTG | 4 cut(s) | 25, 51, 83, 109 |
| Bbv12I | GWGCWC | 1 cut(s) | 56 |
| BccI | CCATC | 1 cut(s) | 35 |
| BpuEI | CTTGAG | 1 cut(s) | 113 |
| BsaAI | YACGTR | 4 cut(s) | 25, 51, 83, 109 |
| BshFI | GGCC | 1 cut(s) | 45 |
| BsiHKAI | GWGCWC | 1 cut(s) | 56 |
| BsnI | GGCC | 1 cut(s) | 45 |
| Bsp1286I | GDGCHC | 1 cut(s) | 56 |
| BspANI | GGCC | 1 cut(s) | 45 |
| Bst4CI | ACNGT | 1 cut(s) | 60 |
| BstBAI | YACGTR | 4 cut(s) | 25, 51, 83, 109 |
| BstEII | GGTNACC | 1 cut(s) | 16 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 51 |
| BstPI | GGTNACC | 1 cut(s) | 16 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 29, 87, 111 |
| BsuRI | GGCC | 1 cut(s) | 45 |
| CviJI | RGCY | 3 cut(s) | 45, 91, 156 |
| CviKI_1 | RGCY | 3 cut(s) | 45, 91, 156 |
| EaeI | YGGCCR | 1 cut(s) | 43 |
| Eco72I | CACGTG | 4 cut(s) | 25, 51, 83, 109 |
| Eco91I | GGTNACC | 1 cut(s) | 16 |
| EcoO65I | GGTNACC | 1 cut(s) | 16 |
| FaiI | YATR | 5 cut(s) | 71, 88, 140, 152, 160 |
| HaeIII | GGCC | 1 cut(s) | 45 |
| HphI | GGTGA | 2 cut(s) | 48, 54 |
| Hpy166II | GTNNAC | 1 cut(s) | 80 |
| Hpy188I | TCNGA | 1 cut(s) | 10 |
| Hpy8I | GTNNAC | 1 cut(s) | 80 |
| HpyCH4III | ACNGT | 1 cut(s) | 60 |
| HpyCH4IV | ACGT | 4 cut(s) | 24, 50, 82, 108 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 51 |
| HpySE526I | ACGT | 4 cut(s) | 24, 50, 82, 108 |
| MaeII | ACGT | 4 cut(s) | 24, 50, 82, 108 |
| MaeIII | GTNAC | 2 cut(s) | 16, 60 |
| MhlI | GDGCHC | 1 cut(s) | 56 |
| MlsI | TGGCCA | 1 cut(s) | 45 |
| MluNI | TGGCCA | 1 cut(s) | 45 |
| Mox20I | TGGCCA | 1 cut(s) | 45 |
| MscI | TGGCCA | 1 cut(s) | 45 |
| MslI | CAYNNNNRTG | 2 cut(s) | 85, 109 |
| Msp20I | TGGCCA | 1 cut(s) | 45 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 51 |
| NmuCI | GTSAC | 1 cut(s) | 60 |
| OliI | CACNNNNGTG | 1 cut(s) | 109 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 56 |
| PmaCI | CACGTG | 4 cut(s) | 25, 51, 83, 109 |
| PmlI | CACGTG | 4 cut(s) | 25, 51, 83, 109 |
| Ppu21I | YACGTR | 4 cut(s) | 25, 51, 83, 109 |
| PsiI | TTATAA | 1 cut(s) | 160 |
| PspCI | CACGTG | 4 cut(s) | 25, 51, 83, 109 |
| PspEI | GGTNACC | 1 cut(s) | 16 |
| RseI | CAYNNNNRTG | 2 cut(s) | 85, 109 |
| SduI | GDGCHC | 1 cut(s) | 56 |
| SetI | ASST | 5 cut(s) | 27, 53, 85, 111, 158 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 85, 109 |
| SmlI | CTYRAG | 1 cut(s) | 92 |
| SmoI | CTYRAG | 1 cut(s) | 92 |
| TaaI | ACNGT | 1 cut(s) | 60 |
| TaiI | ACGT | 4 cut(s) | 27, 53, 85, 111 |
| TseFI | GTSAC | 1 cut(s) | 60 |
| Tsp45I | GTSAC | 1 cut(s) | 60 |