Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0007133

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG184400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGGCTTCGTCGGAGGAGGAACCACCGCAGCAGAGCCAAGAACCGCCGCAGCAATCGCAGCAGCCACAGTCAGTGAAAGACTGTCTTCACAAGACCAAGCTCATTCAATTCTTGGGCCGCACCGCCCCTATCGTCCTCCAGAACGACAATGGTAATGTTCTCTCCCTGAGAAACAACCTGAATTTGAGTGCAGACACTACAGAAGTCTCTCAAGAAAAGTTACTCTCACTCGTTGCTGAAAGATTAATTGATTCTAACAGTAATATTGATAATAAAGATGTTGGCTATGTAGAAAACCAACAGCAGAACATAGCTGATGCTATCGATCTACTCCCTCGACTTGCAACCGGAATCGATGTTAACATAAAATTCAGAAGGATAAGTGATTTTGAGTTTACTCCAGAATGTGCAATATTTGATCTGTTAGACATCCCACTATATCATGGCTGGATAGTTGATCCCCAGGACCATGATACTGCTAATGCAATTGGGTCGAAGTCCTATAACACTCTTACGGGGGAGCTTGTTGCACTGGAAACACAAAATATGGAGAGTGAGTCTAAGGGGAAGAATATTCCTCAAGAAGATTGTGTTGATTTTGTTGCTGCAACAACTGCAACACTTGGTGTACCTTCCCCAAGCCTTTCTAAAACTAGATCTTTTGATGAGTCTCCACATTCAGCTTCTGATGAACCAAAGGTAAGGAAAGGAGACTGTGAAGAAGAAGCAGAGTTGCTGATGGCTTTACAAATGTCTGAGGCTGAGCTTCCGACTGCAGTGGTTGATCCATTTGCAGCAAGTATTGACGCACCGCCTCTGTTAGTTAGTTCAGATGAAAGTACTCATCTTGAGAAGGTTATGCCTGTAGGTTCTGCAGATAAATCCGAAAAACATGATGCTGAATGCAGTAATTCTCATCTGTCAGAACTGTCTGTAGCAGATAACATTGCCCCCAGGAACGAGAGTAGTGATCTGATATCTTTTGAAACTGCTTCAGGGCAAACAGCATGTTCATCCCGGTTGGAGACGACTGAGGTGAACAATAATGGTCAGCGAACTTCTGTGAAATCAGAAGATCTTCCTAAGGATCTGGTTACAAAAAGCACAGGAAACGAATCAGACCAGATTAAAGGTGCAGTTTCTTTTAGTCCTGAGAGAAATAATGAATCCATAGATGAGAACCATACAGATGTTTCAAAAGGGGGTGAAAAATTTGAGGATCAGGTCAAGCTTGCGACTAATGCCGATGGAATTGTAGAAATAAATAAGCAAATTGGGAGCAATATGACAGAGGTTCCTTGCTTATCTGCTTCAAATGTGGGTTCAGATTCATCTAGTGGCAGAATGCTGGAAATTGATGAATCGGAAACTTTGACGTCAAGTGGTGAAGGCAGTGAGCCCATCTATGAAGGAGAGGAACATATTTTGGACTCAGGCACAATTGTTTCTGAACAAAGAGAGCCTGTATATGAAGGTGAGGCAGTGCTTGCAAAGCAAGCAGACAAAGGGATGCTAGATGCAAGGTCAAAGGATGAAATCACTCCACAAGAAGGGGAATTGATCAGGAATTTTTTGAAGAACAATGCTAGTCAATTGACTTTCTACGGCCTTTTCTGCTTACAAGAGGGCCTTAAAGAGCGGGAGCTCTGTGTTTTCTTTCGAAACAACCACTTCAGTACCATGTTTAAGATCAATGGAGAGCTTTATCTTTTGGCTACTGATCAGGGTTACCTGAATCAGCATGATTTAGTGTGGGAAAAGCTTAATGAGGTGAATGGAGATACATTGTTCATGACTGGCAACTTCAAGGAATTTAAAGTTGAAAGCCAATCAAATGAAAATTGGGATGAAAATAATGCTGTTACCAGCACTGCGGACTACCTTGCGAGCATTGATAGTGCAGCTTCAGCAGGCTTCGATCTAAATTCTGATCTGCAATTGGCAATTGCTCTGCAACAACAGGAGTTTGAACAGCAACCACAACAACAACAGCAACGACAAAACGTGCAGCAACCATCTATTAGCGGTAATTCAAGGATGGTCACAGGTCCCCAGGGGCCAAGACATAATGTCAGAACTTCTACAACATCCTCTTCTCCAAGACCTGAAAAGCCCAAGGAAAAGTGTATCATTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MINDY_DUB

Protein Analysis

712

Amino Acids

78.2

Weight (kDa)

4.46

Isoelectric Point (pI)

50.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MINDY_DUB	PF04424	30 - 189	4.4e-42	MINDY deubiquitinase
MINDY_DUB	PF04424	497 - 602	2.1e-37	MINDY deubiquitinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11860
fragaria_vesca	FvH4_5g01250 FvH4_5g01250 FvH4_5g01250 FvH4_5g01250
malus_domestica	MD04G1069800.v1.1 MD04G1069900.v1.1 MD06G1071200.v1.1 MD06G1071400.v1.1
prunus_persica	Prupe.5G088000_v2.0.a1 Prupe.5G088000_v2.0.a1 Prupe.5G088000_v2.0.a1
pyrus_communis	pycom04g06350
rosa_chinensis	RchiOBHm_Chr7g0199771
rosa_laevigata	RLG00000003771
rosa_multiflora	Rmu_sc0002748.1_g000020
rosa_roxburghii	Rroxscaffold_3G00256450
rosa_rugosa	Rorug07G0056200 Rorug07G0056300 Rorug07G0056300
rosa_samantha	Rh7AG181600 Rh7BG184400 Rh7CG191200 Rh7DG184400
rosa_wichuraiana	Rw7G015920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1379
AccBSI	CCGCTC	1 cut(s)	1639
AciI	CCGC	9 cut(s)	26, 44, 47, 118, 123, 812, 1639, 1874, 2025
AclWI	GGATC	4 cut(s)	452, 779, 1095, 1227
AcsI	RAATTY	6 cut(s)	181, 368, 1211, 1567, 1811, 1924
AcuI	CTGAAG	3 cut(s)	978, 1657, 1890
AcyI	GRCGYC	1 cut(s)	1376
AdeI	CACNNNGTG	1 cut(s)	626
AfaI	GTAC	3 cut(s)	630, 841, 1678
AfiI	CCNNNNNNNGG	1 cut(s)	1550
AgsI	TTSAA	9 cut(s)	107, 986, 1197, 1314, 1576, 1807, 1823, 1970, 2034
AhdI	GACNNNNNGTC	1 cut(s)	2069
AjnI	CCWGG	3 cut(s)	462, 953, 2052
Alw21I	GWGCWC	1 cut(s)	1647
Alw26I	GTCTC	4 cut(s)	211, 675, 705, 1019
AlwI	GGATC	4 cut(s)	452, 779, 1095, 1227
AlwNI	CAGNNNCTG	1 cut(s)	686
AoxI	GGCC	4 cut(s)	115, 1606, 1627, 2057
ApeKI	GCWGC	8 cut(s)	28, 49, 58, 61, 605, 794, 1901, 2008
ApoI	RAATTY	6 cut(s)	181, 368, 1211, 1567, 1811, 1924
AseI	ATTAAT	1 cut(s)	245
Asp700I	GAANNNNTTC	1 cut(s)	1077
AspS9I	GGNCC	5 cut(s)	115, 466, 1627, 2048, 2057
AsuC2I	CCSGG	1 cut(s)	1018
AsuHPI	GGTGA	5 cut(s)	1048, 1217, 1397, 1487, 1783
AsuII	TTCGAA	1 cut(s)	1660
AvaII	GGWCC	2 cut(s)	466, 2048
AxyI	CCTNAGG	1 cut(s)	1083
BaeI	ACNNNNGTAYC	2 cut(s)	1660, 1693
BanII	GRGCYC	2 cut(s)	1401, 1647
BbsI	GAAGAC	1 cut(s)	77
Bbv12I	GWGCWC	1 cut(s)	1647
BbvI	GCAGC	8 cut(s)	40, 61, 70, 73, 592, 806, 1913, 2020
BccI	CCATC	5 cut(s)	733, 1241, 1409, 2023, 2032
BceAI	ACGGC	1 cut(s)	1621
BcgI	CGANNNNNNTGC	2 cut(s)	474, 508
BciT130I	CCWGG	3 cut(s)	464, 955, 2054
BclI	TGATCA	2 cut(s)	1560, 1720
BcnI	CCSGG	1 cut(s)	1018
BcoDI	GTCTC	4 cut(s)	211, 675, 705, 1019
BfaI	CTAG	4 cut(s)	654, 1335, 1514, 1587
BfmI	CTRYAG	5 cut(s)	198, 774, 864, 873, 933
BglII	AGATCT	2 cut(s)	656, 1075
BlpI	GCTNAGC	1 cut(s)	762
BmcAI	AGTACT	1 cut(s)	841
Bme1390I	CCNGG	4 cut(s)	464, 955, 1018, 2054
Bme18I	GGWCC	2 cut(s)	466, 2048
BmeRI	GACNNNNNGTC	1 cut(s)	2069
BmgT120I	GGNCC	5 cut(s)	115, 466, 1627, 2048, 2057
BmiI	GGNNCC	4 cut(s)	21, 1296, 2050, 2058
BmrFI	CCNGG	4 cut(s)	464, 955, 1018, 2054
BmsI	GCATC	4 cut(s)	307, 886, 1500, 1507
BpiI	GAAGAC	1 cut(s)	77
BpmI	CTGGAG	2 cut(s)	122, 384
Bpu1102I	GCTNAGC	1 cut(s)	762
Bpu14I	TTCGAA	1 cut(s)	1660
BpuEI	CTTGAG	3 cut(s)	195, 564, 869
BpuMI	CCSGG	1 cut(s)	1018
Bsa29I	ATCGAT	2 cut(s)	324, 354
BsaHI	GRCGYC	1 cut(s)	1376
BsaJI	CCNNGG	5 cut(s)	462, 953, 2052, 2053, 2115
BsaWI	WCCGGW	1 cut(s)	347
BsaXI	ACNNNNNCTCC	2 cut(s)	542, 572
Bsc4I	CCNNNNNNNGG	1 cut(s)	1550
Bse1I	ACTGG	2 cut(s)	537, 1801
Bse21I	CCTNAGG	1 cut(s)	1083
Bse3DI	GCAATG	1 cut(s)	945
BseBI	CCWGG	3 cut(s)	464, 955, 2054
BseCI	ATCGAT	2 cut(s)	324, 354
BseDI	CCNNGG	5 cut(s)	462, 953, 2052, 2053, 2115
BseGI	GGATG	7 cut(s)	429, 1013, 1515, 1537, 1852, 2043, 2087
BseLI	CCNNNNNNNGG	1 cut(s)	1550
BseMI	GCAATG	1 cut(s)	945
BseMII	CTCAG	6 cut(s)	158, 747, 753, 1023, 1143, 1446
BseNI	ACTGG	2 cut(s)	537, 1801
BseRI	GAGGAG	1 cut(s)	29
BseXI	GCAGC	8 cut(s)	40, 61, 70, 73, 592, 806, 1913, 2020
BsgI	GTGCAG	4 cut(s)	210, 1155, 1920, 2027
BshFI	GGCC	4 cut(s)	117, 1608, 1629, 2059
BshVI	ATCGAT	2 cut(s)	324, 354
BsiHKAI	GWGCWC	1 cut(s)	1647
BsiSI	CCGG	2 cut(s)	348, 1018
BslFI	GGGAC	1 cut(s)	2034
BslI	CCNNNNNNNGG	1 cut(s)	1550
BsmAI	GTCTC	4 cut(s)	211, 675, 705, 1019
BsmBI	CGTCTC	1 cut(s)	1019
BsmFI	GGGAC	1 cut(s)	2034
BsmI	GAATGC	2 cut(s)	908, 1350
BsnI	GGCC	4 cut(s)	117, 1608, 1629, 2059
Bsp119I	TTCGAA	1 cut(s)	1660
Bsp1286I	GDGCHC	2 cut(s)	1401, 1647
Bsp1720I	GCTNAGC	1 cut(s)	762
BspACI	CCGC	9 cut(s)	26, 44, 47, 118, 123, 812, 1639, 1874, 2025
BspANI	GGCC	4 cut(s)	117, 1608, 1629, 2059
BspCNI	CTCAG	6 cut(s)	159, 748, 754, 1024, 1144, 1445
BspDI	ATCGAT	2 cut(s)	324, 354
BspHI	TCATGA	1 cut(s)	1791
BspLI	GGNNCC	4 cut(s)	21, 1296, 2050, 2058
BspMAI	CTGCAG	2 cut(s)	778, 877
BspPI	GGATC	4 cut(s)	452, 779, 1095, 1227
BspT104I	TTCGAA	1 cut(s)	1660
BsrBI	CCGCTC	1 cut(s)	1639
BsrDI	GCAATG	1 cut(s)	945
BsrI	ACTGG	2 cut(s)	537, 1801
BssECI	CCNNGG	5 cut(s)	462, 953, 2052, 2053, 2115
BssNI	GRCGYC	1 cut(s)	1376
BssT1I	CCWWGG	1 cut(s)	2115
Bst2UI	CCWGG	3 cut(s)	464, 955, 2054
Bst4CI	ACNGT	5 cut(s)	69, 83, 260, 716, 930
Bst6I	CTCTTC	1 cut(s)	2098
BstACI	GRCGYC	1 cut(s)	1376
BstAPI	GCANNNNNTGC	2 cut(s)	614, 1487
BstBI	TTCGAA	1 cut(s)	1660
BstC8I	GCNNGC	5 cut(s)	1233, 1488, 1497, 1888, 1912
BstDEI	CTNAG	8 cut(s)	167, 561, 756, 762, 1032, 1083, 1152, 1432
BstEII	GGTNACC	1 cut(s)	1727
BstF5I	GGATG	7 cut(s)	429, 1013, 1515, 1537, 1852, 2043, 2087
BstMAI	GTCTC	4 cut(s)	211, 675, 705, 1019
BstMWI	GCNNNNNNNGC	9 cut(s)	55, 58, 614, 1241, 1487, 1492, 1496, 1614, 1907
BstNI	CCWGG	3 cut(s)	464, 955, 2054
BstNSI	RCATGY	1 cut(s)	1011
BstPI	GGTNACC	1 cut(s)	1727
BstSCI	CCNGG	4 cut(s)	462, 953, 1016, 2052
BstSFI	CTRYAG	5 cut(s)	198, 774, 864, 873, 933
BstV1I	GCAGC	8 cut(s)	40, 61, 70, 73, 592, 806, 1913, 2020
BstV2I	GAAGAC	1 cut(s)	77
BstX2I	RGATCY	3 cut(s)	656, 1075, 1087
BstYI	RGATCY	3 cut(s)	656, 1075, 1087
Bsu15I	ATCGAT	2 cut(s)	324, 354
Bsu36I	CCTNAGG	1 cut(s)	1083
BsuRI	GGCC	4 cut(s)	117, 1608, 1629, 2059
BsuTUI	ATCGAT	2 cut(s)	324, 354
BtsCI	GGATG	7 cut(s)	429, 1013, 1515, 1537, 1852, 2043, 2087
BtsI	GCAGTG	4 cut(s)	783, 1399, 1488, 1869
BtsIMutI	CAGTG	6 cut(s)	78, 530, 783, 1399, 1488, 1869
Cac8I	GCNNGC	5 cut(s)	1233, 1488, 1497, 1888, 1912
CaiI	CAGNNNCTG	1 cut(s)	686
CciI	TCATGA	1 cut(s)	1791
Cfr13I	GGNCC	5 cut(s)	115, 466, 1627, 2048, 2057
ClaI	ATCGAT	2 cut(s)	324, 354
CseI	GACGC	1 cut(s)	815
Csp6I	GTAC	3 cut(s)	629, 840, 1677
CviAII	CATG	7 cut(s)	443, 470, 893, 1008, 1681, 1742, 1792
CviQI	GTAC	3 cut(s)	629, 840, 1677
DdeI	CTNAG	8 cut(s)	167, 561, 756, 762, 1032, 1083, 1152, 1432
DraI	TTTAAA	1 cut(s)	1816
DraIII	CACNNNGTG	1 cut(s)	626
DriI	GACNNNNNGTC	1 cut(s)	2069
Eam1104I	CTCTTC	1 cut(s)	2098
Eam1105I	GACNNNNNGTC	1 cut(s)	2069
EarI	CTCTTC	1 cut(s)	2098
Ecl136II	GAGCTC	1 cut(s)	1645
Eco130I	CCWWGG	1 cut(s)	2115
Eco24I	GRGCYC	2 cut(s)	1401, 1647
Eco32I	GATATC	1 cut(s)	978
Eco47I	GGWCC	2 cut(s)	466, 2048
Eco53kI	GAGCTC	1 cut(s)	1645
Eco57I	CTGAAG	3 cut(s)	978, 1657, 1890
Eco81I	CCTNAGG	1 cut(s)	1083
Eco91I	GGTNACC	1 cut(s)	1727
EcoICRI	GAGCTC	1 cut(s)	1645
EcoO109I	RGGNCCY	2 cut(s)	1627, 2048
EcoO65I	GGTNACC	1 cut(s)	1727
EcoRII	CCWGG	3 cut(s)	462, 953, 2052
EcoRV	GATATC	1 cut(s)	978
EcoT14I	CCWWGG	1 cut(s)	2115
EcoT38I	GRGCYC	2 cut(s)	1401, 1647
ErhI	CCWWGG	1 cut(s)	2115
Esp3I	CGTCTC	1 cut(s)	1019
FaeI	CATG	7 cut(s)	446, 473, 896, 1011, 1684, 1745, 1795
FalI	AAGNNNNNCTT	4 cut(s)	69, 101, 1614, 1646
FaqI	GGGAC	1 cut(s)	2034
FatI	CATG	7 cut(s)	442, 469, 892, 1007, 1680, 1741, 1791
FauI	CCCGC	1 cut(s)	1632
FbaI	TGATCA	2 cut(s)	1560, 1720
FokI	GGATG	7 cut(s)	416, 1000, 1522, 1544, 1859, 2050, 2074
FriOI	GRGCYC	2 cut(s)	1401, 1647
FspBI	CTAG	4 cut(s)	654, 1335, 1514, 1587
GsuI	CTGGAG	2 cut(s)	122, 384
HaeIII	GGCC	4 cut(s)	117, 1608, 1629, 2059
HapII	CCGG	2 cut(s)	348, 1018
HgaI	GACGC	1 cut(s)	815
Hin1I	GRCGYC	1 cut(s)	1376
Hin1II	CATG	7 cut(s)	446, 473, 896, 1011, 1684, 1745, 1795
HincII	GTYRAC	1 cut(s)	361
HindII	GTYRAC	1 cut(s)	361
HindIII	AAGCTT	2 cut(s)	1229, 1760
HpaI	GTTAAC	1 cut(s)	361
HpaII	CCGG	2 cut(s)	348, 1018
HphI	GGTGA	5 cut(s)	1048, 1217, 1397, 1487, 1783
Hpy166II	GTNNAC	4 cut(s)	361, 396, 629, 1039
Hpy188III	TCNNGA	8 cut(s)	139, 212, 401, 581, 848, 1151, 1564, 1792
Hpy8I	GTNNAC	4 cut(s)	361, 396, 629, 1039
Hpy99I	CGWCG	1 cut(s)	13
HpyAV	CCTTC	7 cut(s)	369, 642, 847, 1382, 1403, 1466, 1544
HpyCH4III	ACNGT	5 cut(s)	69, 83, 260, 716, 930
HpyCH4IV	ACGT	2 cut(s)	1376, 2004
HpyF10VI	GCNNNNNNNGC	9 cut(s)	55, 58, 614, 1241, 1487, 1492, 1496, 1614, 1907
HpyF3I	CTNAG	8 cut(s)	167, 561, 756, 762, 1032, 1083, 1152, 1432
HpySE526I	ACGT	2 cut(s)	1376, 2004
Hsp92I	GRCGYC	1 cut(s)	1376
Hsp92II	CATG	7 cut(s)	446, 473, 896, 1011, 1684, 1745, 1795
Ksp22I	TGATCA	2 cut(s)	1560, 1720
KspAI	GTTAAC	1 cut(s)	361
LmnI	GCTCC	3 cut(s)	520, 1278, 1642
Lsp1109I	GCAGC	8 cut(s)	40, 61, 70, 73, 592, 806, 1913, 2020
LweI	GCATC	4 cut(s)	307, 886, 1500, 1507
MaeI	CTAG	4 cut(s)	654, 1335, 1514, 1587
MaeII	ACGT	2 cut(s)	1376, 2004
MaeIII	GTNAC	5 cut(s)	219, 1093, 1727, 1861, 2041
MbiI	CCGCTC	1 cut(s)	1639
MboII	GAAGA	9 cut(s)	77, 580, 596, 731, 734, 1070, 1085, 1588, 2085
MfeI	CAATTG	5 cut(s)	486, 1440, 1592, 1937, 1944
MflI	RGATCY	3 cut(s)	656, 1075, 1087
MhlI	GDGCHC	2 cut(s)	1401, 1647
MlyI	GAGTC	3 cut(s)	566, 677, 1424
MmeI	TCCRAC	2 cut(s)	794, 1002
MroXI	GAANNNNTTC	1 cut(s)	1077
MseI	TTAA	7 cut(s)	245, 360, 1128, 1632, 1686, 1764, 1815
MslI	CAYNNNNRTG	1 cut(s)	1188
MspI	CCGG	2 cut(s)	348, 1018
MspR9I	CCNGG	4 cut(s)	464, 955, 1018, 2054
MunI	CAATTG	5 cut(s)	486, 1440, 1592, 1937, 1944
Mva1269I	GAATGC	2 cut(s)	908, 1350
MvaI	CCWGG	3 cut(s)	464, 955, 2054
MwoI	GCNNNNNNNGC	9 cut(s)	55, 58, 614, 1241, 1487, 1492, 1496, 1614, 1907
NciI	CCSGG	1 cut(s)	1018
NlaIII	CATG	7 cut(s)	446, 473, 896, 1011, 1684, 1745, 1795
NlaIV	GGNNCC	4 cut(s)	21, 1296, 2050, 2058
NmuCI	GTSAC	1 cut(s)	2041
NspI	RCATGY	1 cut(s)	1011
NspV	TTCGAA	1 cut(s)	1660
PagI	TCATGA	1 cut(s)	1791
PasI	CCCWGGG	1 cut(s)	2053
PctI	GAATGC	2 cut(s)	908, 1350
PdmI	GAANNNNTTC	1 cut(s)	1077
PfeI	GAWTC	7 cut(s)	251, 351, 1115, 1166, 1328, 1361, 1735
PleI	GAGTC	3 cut(s)	565, 676, 1424
PpsI	GAGTC	3 cut(s)	565, 676, 1424
PpuMI	RGGWCCY	1 cut(s)	2048
PshBI	ATTAAT	1 cut(s)	245
Psp124BI	GAGCTC	1 cut(s)	1647
Psp5II	RGGWCCY	1 cut(s)	2048
Psp6I	CCWGG	3 cut(s)	462, 953, 2052
PspEI	GGTNACC	1 cut(s)	1727
PspGI	CCWGG	3 cut(s)	462, 953, 2052
PspN4I	GGNNCC	4 cut(s)	21, 1296, 2050, 2058
PspPI	GGNCC	5 cut(s)	115, 466, 1627, 2048, 2057
PspPPI	RGGWCCY	1 cut(s)	2048
PstI	CTGCAG	2 cut(s)	778, 877
PstNI	CAGNNNCTG	1 cut(s)	686
PsuI	RGATCY	3 cut(s)	656, 1075, 1087
RsaI	GTAC	3 cut(s)	630, 841, 1678
RsaNI	GTAC	3 cut(s)	629, 840, 1677
RseI	CAYNNNNRTG	1 cut(s)	1188
SacI	GAGCTC	1 cut(s)	1647
SaqAI	TTAA	7 cut(s)	245, 360, 1128, 1632, 1686, 1764, 1815
Sau96I	GGNCC	5 cut(s)	115, 466, 1627, 2048, 2057
ScaI	AGTACT	1 cut(s)	841
SchI	GAGTC	3 cut(s)	566, 677, 1424
ScrFI	CCNGG	4 cut(s)	464, 955, 1018, 2054
SduI	GDGCHC	2 cut(s)	1401, 1647
SfaNI	GCATC	4 cut(s)	307, 886, 1500, 1507
SfcI	CTRYAG	5 cut(s)	198, 774, 864, 873, 933
SfuI	TTCGAA	1 cut(s)	1660
SinI	GGWCC	2 cut(s)	466, 2048
SmiMI	CAYNNNNRTG	1 cut(s)	1188
SmlI	CTYRAG	3 cut(s)	210, 579, 848
SmoI	CTYRAG	3 cut(s)	210, 579, 848
SsiI	CCGC	9 cut(s)	26, 44, 47, 118, 123, 812, 1639, 1874, 2025
SspI	AATATT	3 cut(s)	265, 414, 574
SspMI	CTAG	4 cut(s)	654, 1335, 1514, 1587
SstI	GAGCTC	1 cut(s)	1647
StyD4I	CCNGG	4 cut(s)	462, 953, 1016, 2052
StyI	CCWWGG	1 cut(s)	2115
TaaI	ACNGT	5 cut(s)	69, 83, 260, 716, 930
TaiI	ACGT	2 cut(s)	1379, 2007
TaqI	TCGA	6 cut(s)	324, 337, 354, 494, 1660, 1917
TatI	WGTACW	1 cut(s)	839
TauI	GCSGC	2 cut(s)	49, 120
TfiI	GAWTC	7 cut(s)	251, 351, 1115, 1166, 1328, 1361, 1735
Tru1I	TTAA	7 cut(s)	245, 360, 1128, 1632, 1686, 1764, 1815
Tru9I	TTAA	7 cut(s)	245, 360, 1128, 1632, 1686, 1764, 1815
TscAI	CASTG	6 cut(s)	78, 537, 783, 1399, 1488, 1876
TseFI	GTSAC	1 cut(s)	2041
TseI	GCWGC	8 cut(s)	28, 49, 58, 61, 605, 794, 1901, 2008
Tsp45I	GTSAC	1 cut(s)	2041
TspRI	CASTG	6 cut(s)	78, 537, 783, 1399, 1488, 1876
VpaK11BI	GGWCC	2 cut(s)	466, 2048
VspI	ATTAAT	1 cut(s)	245
XapI	RAATTY	6 cut(s)	181, 368, 1211, 1567, 1811, 1924
XceI	RCATGY	1 cut(s)	1011
XcmI	CCANNNNNNNNNTGG	1 cut(s)	146
XmnI	GAANNNNTTC	1 cut(s)	1077
XspI	CTAG	4 cut(s)	654, 1335, 1514, 1587
ZraI	GACGTC	1 cut(s)	1377
ZrmI	AGTACT	1 cut(s)	841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.