Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006229

Physical Location & Seq

Genomic Coordinates Reverse (-)

62588923 .. 62594278

Gene Structure 5356 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00269870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGCCGACCGTCAGCGTAGGACGGGATCGTCTGTTCGCCGCCCTAGGCAAAAGTTACACTAAGGAAGAGCTGAGGAAGAAGGAAGTGAGTGAGAAAGCTGAGAAAGAGTTTGAAGATGAATGCTTCCGTTTCGGAATTGAGCTAGACGACGTCACAACTGAGAAAGCAATTATAAGGAAAGAAAAGCATCTGGATGAAGAAGCAGGTGACGAAGATGAGGAAGTTATATACAAAATTGACATTCCTGCTAATAGATACGATTTGCTTTGCCTTGAAGGGCTGTCTCAAGCTCTCCGTATTTTCGAAAAGAAAGATGAGGTTCCTCAATATAAGTTGGCAAATGTTAGCAAGGAGTCTATGATGAAAATGCACGTGAAACCAGAGACATCTTTGATTCGACCTCATGTTGTTTGTGCTGTGTTAAGAGGGATGACTTTCACCGAAGCAAGCTATAACAGCTTTATTGACCTCCAAGACAAGCTCCATCAAAATATCTGCCGGCGACGAACCCTAGTTGCCATTGGGACTCATGACTTGGACACAATTCAAGCTCCTTTCTCATATGAGGCTTTGCCACCCTCAAGCATAAGTTTTGTGCCACTGAAACAGGTGAAGAACTTCAGAGCTGATGAACTCATGGAATTTTACAAATCAGATTTGAAACTGAAGAAGTTCTTGCATATAATAGAGAACTCCAAGGTTTTTCCTGTTATATATGATAACAACAGAACTGTTTTGTCGTTACCTCCAATTATAAATGGTGCTCATTCAGCAATCACTTTAAAGACGAAGAATGTTTTCATAGAATGTACAGCTACTGATTTGACAAAGGCCAAGATTGTTCTGAACACAATAGTGACAGCATTTTCAACATATTGTGAAAGAAAGTTTGAGATCGAACCTGTTGAAGTGTTATATCCTGATGGAAAGTCATATGTGTATCCTGATTTATCAATCTACAACATGGACGTTTCGCTATCATACATTAATCGCAAAATTGGACTATCTTTGGGGGCTGATGAGGTCATTGATTTATTGAATAAGATGCAATTGGGGGCTCAGCAGTCTGTATCAGGCAATAACCAGGACGATATCACTGTACTTATACCTCCAACAAGAAGTGACATCCTTCACCCTTGTGATGTCATGGAGGATGTTGCAATTGCATATGGATACAACAATATTCCGCGCACGAAGCCTGCATCTTTGCCTGGATCTTTGAAGCCACTTTTCTTGAATGAGCTTAGCGATGTCCTCAGATCTGAGATTGCAATGAATGGGTATACAGAGGTGTTGAATTTCATATTGTGCTCGTGGCGAGAAAACTTTGACATGTTACGTCGTAGAGATGACAAATCAAAGGCCGTTGTTGTTGGAAATCCTCGCTCATCTGATTTTGAGCTTGTGCGAACCACTCTGATGCCTGGCATATTGAAATCCGTGGGTCACAACAAAGATCACCCAAAGCCCATAAAGGTTTTCGAAGTGGGTGATGTGACTATGTTGGATGAGAAAAAAGATGTTGGTGCAACGAACCGTCGCCAATTAGCAGCATTATACTGTGGGGCTAGCTCTGGTTTTGAGTTGATTCATGGGCTGGTAGATAGAATCATGGAAGTACTTGGGGCTGCTTTTGTTCCTAGTGGTGACAATGCAGGCTACTATTTACAACATGCAGAGGAGCCTGAGTTTCTGCCTGGTGTACAAGCAAGCATCTATTATAAAGGGAAGCAAATTGGAAATTTTGGTATTTTGCACCCTGAGGTCTTAAAGAACTTTGATATTCCTGATCCTTGCTCGTATGTGGAAATGAACATCGAGAGTTTCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006432 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009328 GO:0009987 GO:0010467 GO:0016070 GO:0019538 GO:0019752 GO:0032991 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1901564 GO:1901566 GO:1901576 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

B3_4 B5 tRNA-synt_2d

Protein Analysis

610

Amino Acids

68.87

Weight (kDa)

5.45

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhetRS_B1	PF18262	1 - 104	3.3e-26	Phe-tRNA synthetase beta subunit B1 domain
B3_4	PF03483	150 - 298	2.6e-13	B3/4 domain
B5	PF03484	322 - 392	8.9e-21	tRNA synthetase B5 domain
tRNA_synthFbeta	PF17759	395 - 606	5.3e-48	Phenylalanyl tRNA synthetase beta chain CLM domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006229)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72550 AT1G72550
fragaria_vesca	FvH4_5g13020 FvH4_5g13020 FvH4_5g13020 FvH4_5g13020 FvH4_5g13020 FvH4_5g13020
malus_domestica	MD06G1208000.v1.1 MD14G1218400.v1.1
prunus_persica	Prupe.5G041000_v2.0.a1 Prupe.5G212200_v2.0.a1
pyrus_communis	pycom12g20030
rosa_chinensis	RchiOBHm_Chr7g0184111
rosa_laevigata	RLG00000004999 RLG00000026882 RLG00000028559
rosa_multiflora	Rmu_sc0004712.1_g000004 Rmu_sc0025350.1_g000009
rosa_roxburghii	Rroxscaffold_3G00269870
rosa_rugosa	Rorug06G0463100
rosa_samantha	Rh7AG082700 Rh7BG064300 Rh7CG064900 Rh7DG064500
rosa_wichuraiana	Rw0G002490 Rw7G005290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	173, 755, 1722
AarI	CACCTGC	1 cut(s)	194
AasI	GACNNNNNNGTC	1 cut(s)	27
AatII	GACGTC	1 cut(s)	153
Acc36I	ACCTGC	1 cut(s)	194
AccI	GTMKAC	1 cut(s)	1283
AccII	CGCG	1 cut(s)	1189
AciI	CCGC	2 cut(s)	39, 1187
AclWI	GGATC	3 cut(s)	33, 1222, 1784
AcsI	RAATTY	3 cut(s)	641, 1297, 1741
AcuI	CTGAAG	2 cut(s)	604, 686
AcvI	CACGTG	1 cut(s)	373
AcyI	GRCGYC	1 cut(s)	150
AfaI	GTAC	4 cut(s)	811, 1101, 1620, 1704
AflIII	ACRYGT	1 cut(s)	1332
AjnI	CCWGG	4 cut(s)	1083, 1210, 1423, 1696
AleI	CACNNNNGTG	2 cut(s)	854, 1137
AloI	GAACNNNNNNTCC	2 cut(s)	17, 49
Alw21I	GWGCWC	2 cut(s)	766, 1313
Alw26I	GTCTC	2 cut(s)	288, 377
AlwI	GGATC	3 cut(s)	33, 1222, 1784
AlwNI	CAGNNNCTG	1 cut(s)	818
AoxI	GGCC	2 cut(s)	831, 1362
ApeKI	GCWGC	2 cut(s)	1550, 1628
ApoI	RAATTY	3 cut(s)	641, 1297, 1741
AseI	ATTAAT	1 cut(s)	987
Asp700I	GAANNNNTTC	3 cut(s)	617, 671, 797
AspA2I	CCTAGG	1 cut(s)	43
AspLEI	GCGC	1 cut(s)	1191
AsuHPI	GGTGA	7 cut(s)	218, 430, 622, 1124, 1451, 1502, 1658
AsuII	TTCGAA	2 cut(s)	303, 1482
AsuNHI	GCTAGC	1 cut(s)	1568
AvrII	CCTAGG	1 cut(s)	43
AxyI	CCTNAGG	1 cut(s)	1761
BanII	GRGCYC	1 cut(s)	1060
BauI	CACGAG	1 cut(s)	1312
BbrPI	CACGTG	1 cut(s)	373
Bbv12I	GWGCWC	2 cut(s)	766, 1313
BbvCI	CCTCAGC	1 cut(s)	71
BbvI	GCAGC	2 cut(s)	1562, 1615
BccI	CCATC	2 cut(s)	492, 917
BceAI	ACGGC	1 cut(s)	1349
BciT130I	CCWGG	4 cut(s)	1085, 1212, 1425, 1698
BciVI	GTATCC	2 cut(s)	951, 1166
BcoDI	GTCTC	2 cut(s)	288, 377
BfaI	CTAG	5 cut(s)	44, 143, 512, 1569, 1641
BfuAI	ACCTGC	1 cut(s)	194
BfuI	GTATCC	2 cut(s)	951, 1166
BglII	AGATCT	1 cut(s)	1259
BisI	GCNGC	3 cut(s)	39, 1551, 1629
BlnI	CCTAGG	1 cut(s)	43
BlpI	GCTNAGC	2 cut(s)	1059, 1244
BlsI	GCNGC	3 cut(s)	40, 1552, 1630
BmcAI	AGTACT	1 cut(s)	1620
Bme1390I	CCNGG	4 cut(s)	1085, 1212, 1425, 1698
BmiI	GGNNCC	2 cut(s)	321, 1683
BmrFI	CCNGG	4 cut(s)	1085, 1212, 1425, 1698
BmsI	GCATC	5 cut(s)	196, 1035, 1211, 1410, 1722
BmtI	GCTAGC	1 cut(s)	1572
Bpu10I	CCTNAGC	1 cut(s)	71
Bpu1102I	GCTNAGC	2 cut(s)	1059, 1244
Bpu14I	TTCGAA	2 cut(s)	303, 1482
BpuEI	CTTGAG	2 cut(s)	270, 565
BsaAI	YACGTR	1 cut(s)	373
BsaHI	GRCGYC	1 cut(s)	150
BsaJI	CCNNGG	3 cut(s)	43, 696, 1440
BsaXI	ACNNNNNCTCC	2 cut(s)	1673, 1703
Bse118I	RCCGGY	1 cut(s)	498
Bse21I	CCTNAGG	1 cut(s)	1761
Bse3DI	GCAATG	1 cut(s)	1278
BseBI	CCWGG	4 cut(s)	1085, 1212, 1425, 1698
BseDI	CCNNGG	3 cut(s)	43, 696, 1440
BseGI	GGATG	5 cut(s)	199, 435, 1125, 1159, 1513
BseMI	GCAATG	1 cut(s)	1278
BseMII	CTCAG	8 cut(s)	62, 90, 150, 1073, 1254, 1270, 1677, 1752
BseRI	GAGGAG	1 cut(s)	1694
BseXI	GCAGC	2 cut(s)	1562, 1615
Bsh1236I	CGCG	1 cut(s)	1189
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	2 cut(s)	833, 1364
BsiEI	CGRYCG	1 cut(s)	9
BsiHKAI	GWGCWC	2 cut(s)	766, 1313
BsiSI	CCGG	1 cut(s)	499
BslFI	GGGAC	1 cut(s)	538
BsmAI	GTCTC	2 cut(s)	288, 377
BsmFI	GGGAC	1 cut(s)	538
BsmI	GAATGC	1 cut(s)	125
BsnI	GGCC	2 cut(s)	833, 1364
Bsp119I	TTCGAA	2 cut(s)	303, 1482
Bsp1286I	GDGCHC	3 cut(s)	766, 1060, 1313
Bsp1407I	TGTACA	2 cut(s)	809, 1702
Bsp143I	GATC	6 cut(s)	25, 894, 1214, 1259, 1456, 1789
Bsp1720I	GCTNAGC	2 cut(s)	1059, 1244
BspACI	CCGC	2 cut(s)	39, 1187
BspANI	GGCC	2 cut(s)	833, 1364
BspCNI	CTCAG	8 cut(s)	63, 91, 151, 1072, 1255, 1269, 1678, 1753
BspFNI	CGCG	1 cut(s)	1189
BspHI	TCATGA	1 cut(s)	529
BspLI	GGNNCC	2 cut(s)	321, 1683
BspMI	ACCTGC	1 cut(s)	194
BspOI	GCTAGC	1 cut(s)	1572
BspPI	GGATC	3 cut(s)	33, 1222, 1784
BspQI	GCTCTTC	1 cut(s)	60
BspT104I	TTCGAA	2 cut(s)	303, 1482
BsrDI	GCAATG	1 cut(s)	1278
BsrFI	RCCGGY	1 cut(s)	498
BsrGI	TGTACA	2 cut(s)	809, 1702
BssAI	RCCGGY	1 cut(s)	498
BssECI	CCNNGG	3 cut(s)	43, 696, 1440
BssMI	GATC	6 cut(s)	25, 894, 1214, 1259, 1456, 1789
BssNAI	GTATAC	1 cut(s)	1284
BssNI	GRCGYC	1 cut(s)	150
BssSI	CACGAG	1 cut(s)	1312
BssT1I	CCWWGG	2 cut(s)	43, 696
Bst1107I	GTATAC	1 cut(s)	1284
Bst2BI	CACGAG	1 cut(s)	1312
Bst2UI	CCWGG	4 cut(s)	1085, 1212, 1425, 1698
Bst4CI	ACNGT	5 cut(s)	10, 733, 1099, 1538, 1562
Bst6I	CTCTTC	1 cut(s)	60
BstACI	GRCGYC	1 cut(s)	150
BstAUI	TGTACA	2 cut(s)	809, 1702
BstBAI	YACGTR	1 cut(s)	373
BstBI	TTCGAA	2 cut(s)	303, 1482
BstC8I	GCNNGC	6 cut(s)	448, 500, 1200, 1570, 1657, 1711
BstDSI	CCRYGG	1 cut(s)	1440
BstF5I	GGATG	5 cut(s)	199, 435, 1125, 1159, 1513
BstFNI	CGCG	1 cut(s)	1189
BstHHI	GCGC	1 cut(s)	1191
BstKTI	GATC	6 cut(s)	28, 897, 1217, 1262, 1459, 1792
BstMAI	GTCTC	2 cut(s)	288, 377
BstMBI	GATC	6 cut(s)	25, 894, 1214, 1259, 1456, 1789
BstMCI	CGRYCG	1 cut(s)	9
BstMWI	GCNNNNNNNGC	3 cut(s)	456, 770, 1195
BstNI	CCWGG	4 cut(s)	1085, 1212, 1425, 1698
BstNSI	RCATGY	2 cut(s)	1336, 1676
BstSCI	CCNGG	4 cut(s)	1083, 1210, 1423, 1696
BstUI	CGCG	1 cut(s)	1189
BstV1I	GCAGC	2 cut(s)	1562, 1615
BstX2I	RGATCY	2 cut(s)	1214, 1259
BstYI	RGATCY	2 cut(s)	1214, 1259
BstZ17I	GTATAC	1 cut(s)	1284
Bsu36I	CCTNAGG	1 cut(s)	1761
BsuI	GTATCC	2 cut(s)	951, 1166
BsuRI	GGCC	2 cut(s)	833, 1364
BtgI	CCRYGG	1 cut(s)	1440
BtgZI	GCGATG	1 cut(s)	1263
BtsCI	GGATG	5 cut(s)	199, 435, 1125, 1159, 1513
BtsIMutI	CAGTG	2 cut(s)	599, 1095
BveI	ACCTGC	1 cut(s)	194
Cac8I	GCNNGC	6 cut(s)	448, 500, 1200, 1570, 1657, 1711
CaiI	CAGNNNCTG	1 cut(s)	818
CciI	TCATGA	1 cut(s)	529
CfoI	GCGC	1 cut(s)	1191
Cfr10I	RCCGGY	1 cut(s)	498
Csp6I	GTAC	4 cut(s)	810, 1100, 1619, 1703
CspCI	CAANNNNNGTGG	2 cut(s)	1215, 1250
CviAII	CATG	9 cut(s)	404, 530, 637, 964, 1147, 1333, 1592, 1612, 1673
CviQI	GTAC	4 cut(s)	810, 1100, 1619, 1703
DpnI	GATC	6 cut(s)	27, 896, 1216, 1261, 1458, 1791
DpnII	GATC	6 cut(s)	25, 894, 1214, 1259, 1456, 1789
DraI	TTTAAA	1 cut(s)	783
DrdI	GACNNNNNNGTC	1 cut(s)	27
DseDI	GACNNNNNNGTC	1 cut(s)	27
Eam1104I	CTCTTC	1 cut(s)	60
EarI	CTCTTC	1 cut(s)	60
Eco130I	CCWWGG	2 cut(s)	43, 696
Eco24I	GRGCYC	1 cut(s)	1060
Eco32I	GATATC	1 cut(s)	1093
Eco57I	CTGAAG	2 cut(s)	604, 686
Eco72I	CACGTG	1 cut(s)	373
Eco81I	CCTNAGG	1 cut(s)	1761
EcoRII	CCWGG	4 cut(s)	1083, 1210, 1423, 1696
EcoRV	GATATC	1 cut(s)	1093
EcoT14I	CCWWGG	2 cut(s)	43, 696
EcoT38I	GRGCYC	1 cut(s)	1060
ErhI	CCWWGG	2 cut(s)	43, 696
FaeI	CATG	9 cut(s)	407, 533, 640, 967, 1150, 1336, 1595, 1615, 1676
FalI	AAGNNNNNCTT	2 cut(s)	659, 691
FaqI	GGGAC	1 cut(s)	538
FatI	CATG	9 cut(s)	403, 529, 636, 963, 1146, 1332, 1591, 1611, 1672
FauNDI	CATATG	3 cut(s)	562, 934, 1168
FblI	GTMKAC	1 cut(s)	1283
Fnu4HI	GCNGC	3 cut(s)	39, 1551, 1629
FokI	GGATG	5 cut(s)	206, 442, 1112, 1166, 1520
FriOI	GRGCYC	1 cut(s)	1060
Fsp4HI	GCNGC	3 cut(s)	39, 1551, 1629
FspBI	CTAG	5 cut(s)	44, 143, 512, 1569, 1641
GlaI	GCGC	1 cut(s)	1190
GluI	GCNGC	3 cut(s)	39, 1551, 1629
HaeIII	GGCC	2 cut(s)	833, 1364
HapII	CCGG	1 cut(s)	499
HhaI	GCGC	1 cut(s)	1191
Hin1I	GRCGYC	1 cut(s)	150
Hin1II	CATG	9 cut(s)	407, 533, 640, 967, 1150, 1336, 1595, 1615, 1676
Hin6I	GCGC	1 cut(s)	1189
HinP1I	GCGC	1 cut(s)	1189
HinfI	GANTC	5 cut(s)	353, 394, 526, 1588, 1608
HpaII	CCGG	1 cut(s)	499
HphI	GGTGA	7 cut(s)	218, 430, 622, 1124, 1451, 1502, 1658
Hpy166II	GTNNAC	2 cut(s)	1284, 1703
Hpy188I	TCNGA	8 cut(s)	134, 623, 655, 846, 1259, 1264, 1393, 1419
Hpy188III	TCNNGA	7 cut(s)	191, 530, 920, 944, 1234, 1787, 1819
Hpy8I	GTNNAC	2 cut(s)	1284, 1703
Hpy99I	CGWCG	4 cut(s)	152, 507, 1344, 1542
HpyAV	CCTTC	3 cut(s)	73, 269, 1139
HpyCH4III	ACNGT	5 cut(s)	10, 733, 1099, 1538, 1562
HpyCH4IV	ACGT	4 cut(s)	150, 372, 969, 1339
HpyF10VI	GCNNNNNNNGC	3 cut(s)	456, 770, 1195
HpySE526I	ACGT	4 cut(s)	150, 372, 969, 1339
Hsp92I	GRCGYC	1 cut(s)	150
Hsp92II	CATG	9 cut(s)	407, 533, 640, 967, 1150, 1336, 1595, 1615, 1676
HspAI	GCGC	1 cut(s)	1189
KroI	GCCGGC	1 cut(s)	498
KroNI	GCCGGC	1 cut(s)	500
Kzo9I	GATC	6 cut(s)	25, 894, 1214, 1259, 1456, 1789
LguI	GCTCTTC	1 cut(s)	60
LmnI	GCTCC	3 cut(s)	486, 556, 1681
Lsp1109I	GCAGC	2 cut(s)	1562, 1615
LweI	GCATC	5 cut(s)	196, 1035, 1211, 1410, 1722
MaeI	CTAG	5 cut(s)	44, 143, 512, 1569, 1641
MaeII	ACGT	4 cut(s)	150, 372, 969, 1339
MalI	GATC	6 cut(s)	27, 896, 1216, 1261, 1458, 1791
MboI	GATC	6 cut(s)	25, 894, 1214, 1259, 1456, 1789
MboII	GAAGA	8 cut(s)	77, 88, 125, 209, 224, 625, 679, 802
MfeI	CAATTG	2 cut(s)	1049, 1161
MflI	RGATCY	2 cut(s)	1214, 1259
MhlI	GDGCHC	3 cut(s)	766, 1060, 1313
MlyI	GAGTC	2 cut(s)	362, 520
MmeI	TCCRAC	3 cut(s)	1136, 1354, 1485
MroNI	GCCGGC	1 cut(s)	498
MroXI	GAANNNNTTC	3 cut(s)	617, 671, 797
MseI	TTAA	4 cut(s)	422, 782, 987, 1769
MslI	CAYNNNNRTG	4 cut(s)	192, 854, 1137, 1418
MspI	CCGG	1 cut(s)	499
MspR9I	CCNGG	4 cut(s)	1085, 1212, 1425, 1698
MunI	CAATTG	2 cut(s)	1049, 1161
Mva1269I	GAATGC	1 cut(s)	125
MvaI	CCWGG	4 cut(s)	1085, 1212, 1425, 1698
MvnI	CGCG	1 cut(s)	1189
MwoI	GCNNNNNNNGC	3 cut(s)	456, 770, 1195
NaeI	GCCGGC	1 cut(s)	500
NdeI	CATATG	3 cut(s)	562, 934, 1168
NdeII	GATC	6 cut(s)	25, 894, 1214, 1259, 1456, 1789
NgoMIV	GCCGGC	1 cut(s)	498
NheI	GCTAGC	1 cut(s)	1568
NlaIII	CATG	9 cut(s)	407, 533, 640, 967, 1150, 1336, 1595, 1615, 1676
NlaIV	GGNNCC	2 cut(s)	321, 1683
NmuCI	GTSAC	7 cut(s)	151, 206, 856, 1121, 1445, 1495, 1646
NspI	RCATGY	2 cut(s)	1336, 1676
NspV	TTCGAA	2 cut(s)	303, 1482
OliI	CACNNNNGTG	2 cut(s)	854, 1137
PagI	TCATGA	1 cut(s)	529
PaqCI	CACCTGC	1 cut(s)	194
PciI	ACATGT	1 cut(s)	1332
PciSI	GCTCTTC	1 cut(s)	60
PctI	GAATGC	1 cut(s)	125
PdiI	GCCGGC	1 cut(s)	500
PdmI	GAANNNNTTC	3 cut(s)	617, 671, 797
PfeI	GAWTC	3 cut(s)	394, 1588, 1608
PflFI	GACNNNGTC	1 cut(s)	149
PkrI	GCNGC	3 cut(s)	40, 1552, 1630
PleI	GAGTC	2 cut(s)	361, 520
PmaCI	CACGTG	1 cut(s)	373
PmlI	CACGTG	1 cut(s)	373
PpsI	GAGTC	2 cut(s)	361, 520
Ppu21I	YACGTR	1 cut(s)	373
PscI	ACATGT	1 cut(s)	1332
PshBI	ATTAAT	1 cut(s)	987
PsiI	TTATAA	3 cut(s)	173, 755, 1722
Psp6I	CCWGG	4 cut(s)	1083, 1210, 1423, 1696
PspCI	CACGTG	1 cut(s)	373
PspGI	CCWGG	4 cut(s)	1083, 1210, 1423, 1696
PspN4I	GGNNCC	2 cut(s)	321, 1683
PstNI	CAGNNNCTG	1 cut(s)	818
PsuI	RGATCY	2 cut(s)	1214, 1259
PsyI	GACNNNGTC	1 cut(s)	149
RsaI	GTAC	4 cut(s)	811, 1101, 1620, 1704
RsaNI	GTAC	4 cut(s)	810, 1100, 1619, 1703
RseI	CAYNNNNRTG	4 cut(s)	192, 854, 1137, 1418
SapI	GCTCTTC	1 cut(s)	60
SaqAI	TTAA	4 cut(s)	422, 782, 987, 1769
SatI	GCNGC	3 cut(s)	39, 1551, 1629
Sau3AI	GATC	6 cut(s)	25, 894, 1214, 1259, 1456, 1789
ScaI	AGTACT	1 cut(s)	1620
SchI	GAGTC	2 cut(s)	362, 520
ScrFI	CCNGG	4 cut(s)	1085, 1212, 1425, 1698
SduI	GDGCHC	3 cut(s)	766, 1060, 1313
SfaNI	GCATC	5 cut(s)	196, 1035, 1211, 1410, 1722
SfuI	TTCGAA	2 cut(s)	303, 1482
SmiMI	CAYNNNNRTG	4 cut(s)	192, 854, 1137, 1418
SmlI	CTYRAG	2 cut(s)	285, 580
SmoI	CTYRAG	2 cut(s)	285, 580
SsiI	CCGC	2 cut(s)	39, 1187
SspI	AATATT	1 cut(s)	1183
SspMI	CTAG	5 cut(s)	44, 143, 512, 1569, 1641
StyD4I	CCNGG	4 cut(s)	1083, 1210, 1423, 1696
StyI	CCWWGG	2 cut(s)	43, 696
TaaI	ACNGT	5 cut(s)	10, 733, 1099, 1538, 1562
TaiI	ACGT	4 cut(s)	153, 375, 972, 1342
TaqI	TCGA	5 cut(s)	303, 397, 897, 1482, 1818
TatI	WGTACW	4 cut(s)	809, 1099, 1618, 1702
TauI	GCSGC	1 cut(s)	41
TfiI	GAWTC	3 cut(s)	394, 1588, 1608
Tru1I	TTAA	4 cut(s)	422, 782, 987, 1769
Tru9I	TTAA	4 cut(s)	422, 782, 987, 1769
TscAI	CASTG	2 cut(s)	606, 1102
TseFI	GTSAC	7 cut(s)	151, 206, 856, 1121, 1445, 1495, 1646
TseI	GCWGC	2 cut(s)	1550, 1628
Tsp45I	GTSAC	7 cut(s)	151, 206, 856, 1121, 1445, 1495, 1646
TspDTI	ATGAA	9 cut(s)	132, 210, 377, 645, 790, 1289, 1291, 1580, 1826
TspGWI	ACGGA	3 cut(s)	116, 284, 1429
TspRI	CASTG	2 cut(s)	606, 1102
Tth111I	GACNNNGTC	1 cut(s)	149
VspI	ATTAAT	1 cut(s)	987
XapI	RAATTY	3 cut(s)	641, 1297, 1741
XceI	RCATGY	2 cut(s)	1336, 1676
XmaJI	CCTAGG	1 cut(s)	43
XmiI	GTMKAC	1 cut(s)	1283
XmnI	GAANNNNTTC	3 cut(s)	617, 671, 797
XspI	CTAG	5 cut(s)	44, 143, 512, 1569, 1641
ZraI	GACGTC	1 cut(s)	151
ZrmI	AGTACT	1 cut(s)	1620

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.