Rroxscaffold_4G00280940

Hydroxyproline-rich glycoprotein family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0011979
Physical Location & Seq
Forward (+)
3372787 .. 3375339
2553 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00280940.1

Sequence Viewer

Length: 1443 bp
ATGAGAAGCGTCCATAGCAGCAGCGTCGACACGATCAACGCCGCCGCCACCGCCATCGTCTCCGCCGAAGCGCGCGTCCAGCCCACCGCCGTCCCCAAAAACAGCAAGCGAATTGGTCATGCAGTCCTTGTTCCCGAGCCTACAGTACCAGGAGTTGCAGTTCCTGCCGCAGAAAACCAAACATCCTCAACTTCTATTTCACTTCCCTTCATTGCCCCTCCCTCTTCTCCTGCATCTTTCCTGCCATCTGAACCACCATCCTCTACCCAATCACCTGCCGGATTCATGTCATTTGCTTCCCTTTCTGCCAATGCCTACTCTCCAGGTGGAGCTCAGTCCATGTTCACCATTGGCCCTTATGCATATGAGACCCAATTAGTCTCACCACCTGTGTTCTCCACCTTCAACACTGAACCATCTACTGCTCCATATACTCCCCCTCCCGAATCTGTGCAACTGACTACACCTTCATCCCCTGAAGTGCCATTTGCTCAGCTTCTGACATCTTCGCTGGATCGAAGTCGCAGACACAGTGGTGGCAGTCAGAAGTTTGCATTGTCCTATGGTGAATTCCAGCCGTACCAACAATATCCAGGAAGCCCAGGTGGCCAGCTCAGATCACCGGGATCAGCAATATCAAATTCTGGCACATCTTCTCCTTTTCCTGACAGATATCCGGGGCCTGACTTTCGCATGGGGGAAGCTCCCAAACTCATGGGGTTTGAACATTTCACCACTCATAAATGGGGTTCAAGGCTAGGTTCTGGATCATTAACACCAGATGGTGCGGGGTTGGGTTCCAGGCTAGGTTCTGGGACACTAACGCCAGACGGCTATGAGCTAGGTTCAAGGTTAGCTTCTGGATCTATGACCCCTAATGGTGTGGGGATTGGTTCTAAGCTGGGTTCTGGATGTTTGACACCCGATGGTATGGGGCCTGCGTCTAGAGACACTGTCCTTCCGGAGAACCAGATATCTGAGGTGGCATCCCTGGCCAACTCTGAGAGTGGATGTCAAAATGATGGAAATGTATTTGATCACAGGGTGTCATTTGAATTGACTTGTGAGGATGTTGCATGCTGTCTTGCAAATAAATCAGGTGCGTCATTTAAAACTGCATTAGAATCGTCAAAGGATATGCCAGCTGAAATCCCAAATGAAAGACACGGGTCATCAATAACAAATAAGTCGAGTGCTGGGGACAGTTTCAGTAGAATTCCTGAAAATTGTTTGGGAGAAGGGGAAGATCATTGTTATCGGAAGCATAGATCAATCACGCTTGGGTCAACGAAGGACTTCAATTTTGACAACACAAAACCTGATGTTCCCAATAAGTCGGACATTGGCTCAGAGTGGTGGGCAAACAAAAACGTTGCTGCTAAGGAATCGAAACCTGGCAATGACTGGACGTTTTTTCCAATTCTACAAGCTGGAGTTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

480

Amino Acids

50.34

Weight (kDa)

5.65

Isoelectric Point (pI)

54.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011979)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25620 AT5G52430
fragaria_vesca FvH4_7g29970 FvH4_7g29970 FvH4_7g29970
malus_domestica MD01G1205800.v1.1
prunus_persica Prupe.2G298300_v2.0.a1
pyrus_communis pycom01g21520 pycom07g25120
rosa_chinensis RchiOBHm_Chr1g0377921
rosa_laevigata RLG00000026486
rosa_multiflora Rmu_sc0004824.1_g000016
rosa_roxburghii Rroxscaffold_4G00280940
rosa_rugosa Rorug01G0405400
rosa_samantha Rh1AG426000 Rh1BG383100 Rh1CG396900 Rh1DG414100
rosa_wichuraiana Rw1G037240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 283
Acc36I ACCTGC 1 cut(s) 283
AccI GTMKAC 1 cut(s) 27
AccII CGCG 2 cut(s) 73, 75
AccIII TCCGGA 1 cut(s) 961
AciI CCGC 7 cut(s) 42, 45, 51, 63, 87, 168, 788
AclI AACGTT 1 cut(s) 1371
AclWI GGATC 4 cut(s) 522, 634, 775, 871
AcoI YGGCCR 2 cut(s) 607, 993
AcsI RAATTY 3 cut(s) 569, 640, 1215
AcuI CTGAAG 1 cut(s) 498
AdeI CACNNNGTG 1 cut(s) 1045
AfaI GTAC 2 cut(s) 147, 581
AgsI TTSAA 6 cut(s) 406, 725, 753, 849, 1055, 1300
AjnI CCWGG 7 cut(s) 148, 322, 592, 601, 800, 990, 1393
AleI CACNNNNGTG 1 cut(s) 534
AloI GAACNNNNNNTCC 2 cut(s) 144, 176
AluBI AGCT 9 cut(s) 332, 496, 613, 704, 841, 857, 901, 1145, 1430
AluI AGCT 9 cut(s) 332, 496, 613, 704, 841, 857, 901, 1145, 1430
Alw21I GWGCWC 1 cut(s) 334
Alw26I GTCTC 4 cut(s) 64, 362, 385, 942
AlwI GGATC 4 cut(s) 522, 634, 775, 871
AlwNI CAGNNNCTG 2 cut(s) 164, 499
Ama87I CYCGRG 1 cut(s) 134
Aor13HI TCCGGA 1 cut(s) 961
AoxI GGCC 5 cut(s) 352, 607, 680, 935, 993
ApeKI GCWGC 3 cut(s) 18, 21, 1376
ApoI RAATTY 3 cut(s) 569, 640, 1215
ArsI GACNNNNNNTTYG 4 cut(s) 60, 92, 1286, 1318
Asp700I GAANNNNTTC 1 cut(s) 1295
AspLEI GCGC 2 cut(s) 73, 75
AspS9I GGNCC 3 cut(s) 353, 680, 935
AsuC2I CCSGG 2 cut(s) 624, 678
AsuHPI GGTGA 6 cut(s) 264, 337, 375, 578, 612, 724
AvaI CYCGRG 1 cut(s) 134
BalI TGGCCA 2 cut(s) 609, 995
BanII GRGCYC 1 cut(s) 334
Bbv12I GWGCWC 1 cut(s) 334
BbvI GCAGC 3 cut(s) 30, 33, 1363
BccI CCATC 7 cut(s) 62, 253, 265, 424, 776, 920, 1016
BceAI ACGGC 3 cut(s) 74, 562, 847
BcgI CGANNNNNNTGC 4 cut(s) 7, 41, 1107, 1141
BciT130I CCWGG 7 cut(s) 150, 324, 594, 603, 802, 992, 1395
BclI TGATCA 1 cut(s) 1036
BcnI CCSGG 2 cut(s) 624, 678
BcoDI GTCTC 4 cut(s) 64, 362, 385, 942
BfaI CTAG 4 cut(s) 758, 806, 842, 945
BfmI CTRYAG 1 cut(s) 141
BfuAI ACCTGC 1 cut(s) 283
BglI GCCNNNNNGGC 1 cut(s) 606
BisI GCNGC 6 cut(s) 19, 22, 42, 45, 168, 1377
BlpI GCTNAGC 1 cut(s) 492
BlsI GCNGC 6 cut(s) 20, 23, 43, 46, 169, 1378
Bme1390I CCNGG 9 cut(s) 150, 324, 594, 603, 624, 678, 802, 992, 1395
BmeT110I CYCGRG 1 cut(s) 134
BmgT120I GGNCC 3 cut(s) 353, 680, 935
BmiI GGNNCC 3 cut(s) 681, 799, 936
BmrFI CCNGG 9 cut(s) 150, 324, 594, 603, 624, 678, 802, 992, 1395
BmsI GCATC 2 cut(s) 242, 995
BoxI GACNNNNGTC 1 cut(s) 1168
BpmI CTGGAG 1 cut(s) 306
Bpu10I CCTNAGC 1 cut(s) 1380
Bpu1102I GCTNAGC 1 cut(s) 492
BpuMI CCSGG 2 cut(s) 624, 678
BsaI GGTCTC 1 cut(s) 362
BsaJI CCNNGG 3 cut(s) 601, 677, 990
BsaWI WCCGGW 1 cut(s) 961
BsaXI ACNNNNNCTCC 6 cut(s) 144, 174, 424, 454, 640, 670
Bse1I ACTGG 1 cut(s) 1409
Bse3DI GCAATG 2 cut(s) 210, 1405
BseAI TCCGGA 1 cut(s) 961
BseBI CCWGG 7 cut(s) 150, 324, 594, 603, 802, 992, 1395
BseDI CCNNGG 3 cut(s) 601, 677, 990
BseGI GGATG 7 cut(s) 182, 257, 470, 917, 986, 1016, 1075
BseMI GCAATG 2 cut(s) 210, 1405
BseMII CTCAG 6 cut(s) 347, 506, 628, 969, 993, 1362
BseNI ACTGG 1 cut(s) 1409
BsePI GCGCGC 1 cut(s) 71
BseXI GCAGC 3 cut(s) 30, 33, 1363
BseYI CCCAGC 2 cut(s) 901, 1196
Bsh1236I CGCG 2 cut(s) 73, 75
BshFI GGCC 5 cut(s) 354, 609, 682, 937, 995
BsiHKAI GWGCWC 1 cut(s) 334
BsiHKCI CYCGRG 1 cut(s) 134
BsiSI CCGG 4 cut(s) 279, 623, 677, 962
BslFI GGGAC 3 cut(s) 77, 829, 1214
BsmAI GTCTC 4 cut(s) 64, 362, 385, 942
BsmBI CGTCTC 1 cut(s) 64
BsmFI GGGAC 3 cut(s) 77, 829, 1214
BsnI GGCC 5 cut(s) 354, 609, 682, 937, 995
Bso31I GGTCTC 1 cut(s) 362
BsoBI CYCGRG 1 cut(s) 134
Bsp1286I GDGCHC 1 cut(s) 334
Bsp13I TCCGGA 1 cut(s) 961
Bsp143I GATC 9 cut(s) 33, 514, 617, 626, 767, 863, 1036, 1246, 1268
Bsp1720I GCTNAGC 1 cut(s) 492
BspACI CCGC 7 cut(s) 42, 45, 51, 63, 87, 168, 788
BspANI GGCC 5 cut(s) 354, 609, 682, 937, 995
BspCNI CTCAG 6 cut(s) 346, 505, 627, 970, 994, 1361
BspEI TCCGGA 1 cut(s) 961
BspFNI CGCG 2 cut(s) 73, 75
BspLI GGNNCC 3 cut(s) 681, 799, 936
BspMI ACCTGC 1 cut(s) 283
BspPI GGATC 4 cut(s) 522, 634, 775, 871
BspTNI GGTCTC 1 cut(s) 362
BsrDI GCAATG 2 cut(s) 210, 1405
BsrI ACTGG 1 cut(s) 1409
BssECI CCNNGG 3 cut(s) 601, 677, 990
BssHII GCGCGC 1 cut(s) 71
BssMI GATC 9 cut(s) 33, 514, 617, 626, 767, 863, 1036, 1246, 1268
Bst2UI CCWGG 7 cut(s) 150, 324, 594, 603, 802, 992, 1395
Bst4CI ACNGT 4 cut(s) 145, 533, 955, 1205
Bst6I CTCTTC 1 cut(s) 229
BstAPI GCANNNNNTGC 1 cut(s) 164
BstC8I GCNNGC 6 cut(s) 73, 107, 611, 939, 1078, 1143
BstDEI CTNAG 8 cut(s) 333, 492, 614, 897, 978, 1002, 1348, 1380
BstF5I GGATG 7 cut(s) 182, 257, 470, 917, 986, 1016, 1075
BstFNI CGCG 2 cut(s) 73, 75
BstHHI GCGC 2 cut(s) 73, 75
BstKTI GATC 9 cut(s) 36, 517, 620, 629, 770, 866, 1039, 1249, 1271
BstMAI GTCTC 4 cut(s) 64, 362, 385, 942
BstMBI GATC 9 cut(s) 33, 514, 617, 626, 767, 863, 1036, 1246, 1268
BstMWI GCNNNNNNNGC 6 cut(s) 15, 50, 79, 164, 606, 992
BstNI CCWGG 7 cut(s) 150, 324, 594, 603, 802, 992, 1395
BstNSI RCATGY 1 cut(s) 1080
BstPAI GACNNNNGTC 1 cut(s) 1168
BstSCI CCNGG 9 cut(s) 148, 322, 592, 601, 622, 676, 800, 990, 1393
BstSFI CTRYAG 1 cut(s) 141
BstUI CGCG 2 cut(s) 73, 75
BstV1I GCAGC 3 cut(s) 30, 33, 1363
BstX2I RGATCY 1 cut(s) 863
BstXI CCANNNNNNTGG 1 cut(s) 715
BstYI RGATCY 1 cut(s) 863
BsuRI GGCC 5 cut(s) 354, 609, 682, 937, 995
BtsCI GGATG 7 cut(s) 182, 257, 470, 917, 986, 1016, 1075
BtsIMutI CAGTG 3 cut(s) 408, 538, 951
BveI ACCTGC 1 cut(s) 283
Cac8I GCNNGC 6 cut(s) 73, 107, 611, 939, 1078, 1143
CaiI CAGNNNCTG 2 cut(s) 164, 499
CfoI GCGC 2 cut(s) 73, 75
Cfr13I GGNCC 3 cut(s) 353, 680, 935
CseI GACGC 4 cut(s) 13, 64, 930, 1092
Csp6I GTAC 2 cut(s) 146, 580
CviAII CATG 6 cut(s) 119, 286, 340, 694, 715, 1077
CviQI GTAC 2 cut(s) 146, 580
DdeI CTNAG 8 cut(s) 333, 492, 614, 897, 978, 1002, 1348, 1380
DpnI GATC 9 cut(s) 35, 516, 619, 628, 769, 865, 1038, 1248, 1270
DpnII GATC 9 cut(s) 33, 514, 617, 626, 767, 863, 1036, 1246, 1268
DraI TTTAAA 1 cut(s) 1111
DraIII CACNNNGTG 1 cut(s) 1045
EaeI YGGCCR 2 cut(s) 607, 993
Eam1104I CTCTTC 1 cut(s) 229
EarI CTCTTC 1 cut(s) 229
EciI GGCGGA 1 cut(s) 52
Ecl136II GAGCTC 1 cut(s) 332
Eco24I GRGCYC 1 cut(s) 334
Eco31I GGTCTC 1 cut(s) 362
Eco32I GATATC 2 cut(s) 674, 975
Eco53kI GAGCTC 1 cut(s) 332
Eco57I CTGAAG 1 cut(s) 498
Eco88I CYCGRG 1 cut(s) 134
EcoICRI GAGCTC 1 cut(s) 332
EcoO109I RGGNCCY 2 cut(s) 680, 935
EcoRI GAATTC 2 cut(s) 569, 1215
EcoRII CCWGG 7 cut(s) 148, 322, 592, 601, 800, 990, 1393
EcoRV GATATC 2 cut(s) 674, 975
EcoT22I ATGCAT 1 cut(s) 364
EcoT38I GRGCYC 1 cut(s) 334
Esp3I CGTCTC 1 cut(s) 64
FaeI CATG 6 cut(s) 122, 289, 343, 697, 718, 1080
FalI AAGNNNNNCTT 2 cut(s) 841, 873
FaqI GGGAC 3 cut(s) 77, 829, 1214
FatI CATG 6 cut(s) 118, 285, 339, 693, 714, 1076
FauI CCCGC 1 cut(s) 781
FauNDI CATATG 1 cut(s) 364
FbaI TGATCA 1 cut(s) 1036
FblI GTMKAC 1 cut(s) 27
Fnu4HI GCNGC 6 cut(s) 19, 22, 42, 45, 168, 1377
FokI GGATG 7 cut(s) 169, 244, 457, 924, 973, 1023, 1082
FriOI GRGCYC 1 cut(s) 334
Fsp4HI GCNGC 6 cut(s) 19, 22, 42, 45, 168, 1377
FspBI CTAG 4 cut(s) 758, 806, 842, 945
GlaI GCGC 2 cut(s) 72, 74
GluI GCNGC 6 cut(s) 19, 22, 42, 45, 168, 1377
GsaI CCCAGC 2 cut(s) 905, 1200
GsuI CTGGAG 1 cut(s) 306
HaeIII GGCC 5 cut(s) 354, 609, 682, 937, 995
HapII CCGG 4 cut(s) 279, 623, 677, 962
HgaI GACGC 4 cut(s) 13, 64, 930, 1092
HhaI GCGC 2 cut(s) 73, 75
Hin1II CATG 6 cut(s) 122, 289, 343, 697, 718, 1080
Hin6I GCGC 2 cut(s) 71, 73
HinP1I GCGC 2 cut(s) 71, 73
HincII GTYRAC 2 cut(s) 28, 1287
HindII GTYRAC 2 cut(s) 28, 1287
HinfI GANTC 4 cut(s) 282, 446, 1124, 1385
HpaII CCGG 4 cut(s) 279, 623, 677, 962
HphI GGTGA 6 cut(s) 264, 337, 375, 578, 612, 724
Hpy166II GTNNAC 3 cut(s) 28, 345, 1287
Hpy188I TCNGA 9 cut(s) 250, 501, 546, 617, 979, 1003, 1260, 1339, 1351
Hpy188III TCNNGA 9 cut(s) 134, 443, 665, 765, 861, 909, 945, 962, 1220
Hpy8I GTNNAC 3 cut(s) 28, 345, 1287
Hpy99I CGWCG 1 cut(s) 29
HpyAV CCTTC 6 cut(s) 217, 412, 477, 968, 1232, 1285
HpyCH4III ACNGT 4 cut(s) 145, 533, 955, 1205
HpyCH4IV ACGT 2 cut(s) 1371, 1409
HpyCH4V TGCA 9 cut(s) 122, 158, 233, 362, 454, 554, 1076, 1088, 1118
HpyF10VI GCNNNNNNNGC 6 cut(s) 15, 50, 79, 164, 606, 992
HpyF3I CTNAG 8 cut(s) 333, 492, 614, 897, 978, 1002, 1348, 1380
HpySE526I ACGT 2 cut(s) 1371, 1409
Hsp92II CATG 6 cut(s) 122, 289, 343, 697, 718, 1080
HspAI GCGC 2 cut(s) 71, 73
Kpn2I TCCGGA 1 cut(s) 961
Ksp22I TGATCA 1 cut(s) 1036
Kzo9I GATC 9 cut(s) 33, 514, 617, 626, 767, 863, 1036, 1246, 1268
LmnI GCTCC 3 cut(s) 329, 430, 709
Lsp1109I GCAGC 3 cut(s) 30, 33, 1363
LweI GCATC 2 cut(s) 242, 995
MaeI CTAG 4 cut(s) 758, 806, 842, 945
MaeII ACGT 2 cut(s) 1371, 1409
MalI GATC 9 cut(s) 35, 516, 619, 628, 769, 865, 1038, 1248, 1270
MboI GATC 9 cut(s) 33, 514, 617, 626, 767, 863, 1036, 1246, 1268
MboII GAAGA 4 cut(s) 216, 498, 645, 1256
MflI RGATCY 1 cut(s) 863
MhlI GDGCHC 1 cut(s) 334
MlsI TGGCCA 2 cut(s) 609, 995
MluCI AATT 9 cut(s) 111, 374, 569, 640, 1055, 1215, 1225, 1300, 1419
MluNI TGGCCA 2 cut(s) 609, 995
MmeI TCCRAC 1 cut(s) 1317
MnlI CCTC 7 cut(s) 196, 228, 232, 271, 450, 973, 1060
Mox20I TGGCCA 2 cut(s) 609, 995
Mph1103I ATGCAT 1 cut(s) 364
MroI TCCGGA 1 cut(s) 961
MroXI GAANNNNTTC 1 cut(s) 1295
MscI TGGCCA 2 cut(s) 609, 995
MseI TTAA 2 cut(s) 773, 1110
MslI CAYNNNNRTG 1 cut(s) 534
Msp20I TGGCCA 2 cut(s) 609, 995
MspA1I CMGCKG 1 cut(s) 1145
MspI CCGG 4 cut(s) 279, 623, 677, 962
MspR9I CCNGG 9 cut(s) 150, 324, 594, 603, 624, 678, 802, 992, 1395
MvaI CCWGG 7 cut(s) 150, 324, 594, 603, 802, 992, 1395
MvnI CGCG 2 cut(s) 73, 75
MwoI GCNNNNNNNGC 6 cut(s) 15, 50, 79, 164, 606, 992
NciI CCSGG 2 cut(s) 624, 678
NdeI CATATG 1 cut(s) 364
NdeII GATC 9 cut(s) 33, 514, 617, 626, 767, 863, 1036, 1246, 1268
NlaIII CATG 6 cut(s) 122, 289, 343, 697, 718, 1080
NlaIV GGNNCC 3 cut(s) 681, 799, 936
NsiI ATGCAT 1 cut(s) 364
NspI RCATGY 1 cut(s) 1080
OliI CACNNNNGTG 1 cut(s) 534
PaeI GCATGC 1 cut(s) 1080
PaqCI CACCTGC 1 cut(s) 283
PauI GCGCGC 1 cut(s) 71
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PdmI GAANNNNTTC 1 cut(s) 1295
PfeI GAWTC 4 cut(s) 282, 446, 1124, 1385
PflFI GACNNNGTC 1 cut(s) 953
PfoI TCCNGGA 1 cut(s) 592
PkrI GCNGC 6 cut(s) 20, 23, 43, 46, 169, 1378
PshAI GACNNNNGTC 1 cut(s) 1168
Psp124BI GAGCTC 1 cut(s) 334
Psp1406I AACGTT 1 cut(s) 1371
Psp6I CCWGG 7 cut(s) 148, 322, 592, 601, 800, 990, 1393
PspFI CCCAGC 2 cut(s) 901, 1196
PspGI CCWGG 7 cut(s) 148, 322, 592, 601, 800, 990, 1393
PspN4I GGNNCC 3 cut(s) 681, 799, 936
PspPI GGNCC 3 cut(s) 353, 680, 935
PstNI CAGNNNCTG 2 cut(s) 164, 499
PsuI RGATCY 1 cut(s) 863
PsyI GACNNNGTC 1 cut(s) 953
PteI GCGCGC 1 cut(s) 71
PvuII CAGCTG 1 cut(s) 1145
RsaI GTAC 2 cut(s) 147, 581
RsaNI GTAC 2 cut(s) 146, 580
RseI CAYNNNNRTG 1 cut(s) 534
SacI GAGCTC 1 cut(s) 334
SalI GTCGAC 1 cut(s) 26
SaqAI TTAA 2 cut(s) 773, 1110
SatI GCNGC 6 cut(s) 19, 22, 42, 45, 168, 1377
Sau3AI GATC 9 cut(s) 33, 514, 617, 626, 767, 863, 1036, 1246, 1268
Sau96I GGNCC 3 cut(s) 353, 680, 935
ScrFI CCNGG 9 cut(s) 150, 324, 594, 603, 624, 678, 802, 992, 1395
SduI GDGCHC 1 cut(s) 334
SfaNI GCATC 2 cut(s) 242, 995
SfcI CTRYAG 1 cut(s) 141
SmiMI CAYNNNNRTG 1 cut(s) 534
SphI GCATGC 1 cut(s) 1080
Sse9I AATT 9 cut(s) 111, 374, 569, 640, 1055, 1215, 1225, 1300, 1419
SsiI CCGC 7 cut(s) 42, 45, 51, 63, 87, 168, 788
SspMI CTAG 4 cut(s) 758, 806, 842, 945
SstI GAGCTC 1 cut(s) 334
StyD4I CCNGG 9 cut(s) 148, 322, 592, 601, 622, 676, 800, 990, 1393
TaaI ACNGT 4 cut(s) 145, 533, 955, 1205
TaiI ACGT 2 cut(s) 1374, 1412
TaqI TCGA 4 cut(s) 27, 517, 1190, 1388
TasI AATT 9 cut(s) 111, 374, 569, 640, 1055, 1215, 1225, 1300, 1419
TauI GCSGC 3 cut(s) 44, 47, 170
TfiI GAWTC 4 cut(s) 282, 446, 1124, 1385
Tru1I TTAA 2 cut(s) 773, 1110
Tru9I TTAA 2 cut(s) 773, 1110
TscAI CASTG 3 cut(s) 415, 538, 958
TseI GCWGC 3 cut(s) 18, 21, 1376
TspDTI ATGAA 4 cut(s) 199, 274, 459, 1173
TspRI CASTG 3 cut(s) 415, 538, 958
Tth111I GACNNNGTC 1 cut(s) 953
XapI RAATTY 3 cut(s) 569, 640, 1215
XbaI TCTAGA 1 cut(s) 944
XceI RCATGY 1 cut(s) 1080
XmiI GTMKAC 1 cut(s) 27
XmnI GAANNNNTTC 1 cut(s) 1295
XspI CTAG 4 cut(s) 758, 806, 842, 945
Zsp2I ATGCAT 1 cut(s) 364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.