Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0011389

Physical Location & Seq

Genomic Coordinates Forward (+)

15448046 .. 15449428

Gene Structure 1383 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00295390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1383 bp

ATGCGGCATCTCCTCTCTCTACGCTCACTCAAAACCGTACTAACCCTCCCTTCAAAAACCCCACCACTTATCATCTCCTTCTCCTTCCACACCTCCCAACCCCAACCCCACCTCCACCACCCACAACCCCACCATGAAATCATTGGGTCTCCCTCCAGAGTCCAAAAGCTCATCGCTTCCCAATCCGATCCTCTCCTCGCCAAAGAGATCTTCGACTTCGCCGCCCGCCACCCCCATTTCCGTCACTCCTACTCCTCCTACTTCACCCTCATCCTCAAGCTCGCCCGCTCCCACTACTTCTCTCTCGTCGACCACCTCCTCCTCCGCCTCAAGTCCCAACCCTACTCCCCCTCCCCTGCTCTCTTCACCCACCTCATCAAAATCTACGGCGAGGCCCATCTGCCCCAGAAGGCCCTCAAAACCTTCTACACAATGTTCCAATTCGACTGCAAACCCTCTGCCAAGCACCTCAACCGGATTCTCGACATTCTGGTCTCTCACCGGAACTTCCTCCGGCCGGCTTTCGACGTTTTCAGGGACGCCCACCGCCACGGGGTGGCGCCGGATACTAAATCCTACAACATTCTGATGAGGGCCTTCTGCTTGAATGGGGACCTCAGTGTTGCATACCACCTGTTCAACAAAATGTTTGAGAGAGAGGTCGTGCCGGATGTGGAGTCGTATCGGATTTTGATGCAGGGGCTGTGCAGGAAGGGGCAGGTGAACACTGCTGTGGATTTTCTGGAGGATATGATCAACAAAGGGTTCGTTCCGGATTCGTTGAGTTATACTAGCTTGTTGAATAGCTTGTGTAGGAAGAAACAGCTGCGTGAGGCGTATAAGCTTCTTTGTAGGATGAAGGTGAAGGGGTGTAACCCTGACATTGTGCATTACAATACTGTGATATTGGGGTTTTGTAGAGAAGGGAGGGCAGTGGATGGTTGTAAGGTTCTTGAAGATATGGCATCCAATGGGTGCTTGCCCAATTTGGTGTCGTATAGGACTTTGGTTAGTGGGTTGTGTGATCAGGGGATGCTTGATGAGGCGAAGAACTATATGGAGACAATGATATCAAAGGGGTTTTCTCCACATTTTTCGGTTATCCATGCTTTGGTTAAGGGGTTCTGCAATGTGGGTAGGGTTGAGGAAGCTTGTGGAGTTATGGAGGAGATACTAAGGCATGGGGAGGTTCCACACAGGGAGACTTGGTTGACAATAGTTCCGGGGATATGCGAAGAGGTTGAGCTGGTGAGAATGGAAGAAGTTCTGAAGGAAATAATGAAGGTAGAGATCAAGCCTAGCACCAGAATAGTGGAGGCAGCTTTTGGATTGGAGAACTACTTGATCAAAAAAATTCATGCTAGTAAATCAAGGAGAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000301 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0016070 GO:0016192 GO:0016787 GO:0016788 GO:0017119 GO:0022607 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048193 GO:0048213 GO:0051179 GO:0051234 GO:0065003 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0099023 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG4 PPR PPR_2 RINT1_TIP1

Protein Analysis

460

Amino Acids

52.57

Weight (kDa)

9.14

Isoelectric Point (pI)

42.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	95 - 215	1.3e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	137 - 268	7.4e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	158 - 201	3.1e-06	PPR repeat family
PPR_3	PF13812	177 - 233	1.7e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	185 - 216	1.1e-07	PPR repeat
PPR_2	PF13041	188 - 237	2e-14	PPR repeat family
PPR_1	PF12854	220 - 251	2e-08	PPR repeat
PPR_2	PF13041	230 - 272	2.3e-12	PPR repeat family
PPR_3	PF13812	248 - 306	9e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	254 - 287	1.6e-08	PPR repeat
PPR_2	PF13041	258 - 295	6e-10	PPR repeat family
PPR	PF01535	262 - 291	5.3e-07	PPR repeat
PPR_long	PF17177	274 - 406	6.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	289 - 321	9.3e-10	PPR repeat
PPR_2	PF13041	293 - 342	4.8e-14	PPR repeat family
PPR_1	PF12854	324 - 356	6.9e-09	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011389)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01400
fragaria_vesca	FvH4_7g17740 FvH4_7g17740 FvH4_7g17740
malus_domestica	MD01G1088700.v1.1
prunus_persica	Prupe.2G196300_v2.0.a1
pyrus_communis	pycom01g11310
rosa_chinensis	RchiOBHm_Chr1g0361141
rosa_laevigata	RLG00000027746
rosa_multiflora	Rmu_sc0002863.1_g000035 Rmu_sc0020096.1_g000003
rosa_roxburghii	Rroxscaffold_4G00295390
rosa_rugosa	Rorug01G0286000 Rorug02G0035000
rosa_samantha	Rh1AG297500 Rh1BG261600 Rh1CG278900 Rh1DG291400
rosa_wichuraiana	Rw1G026270 Rw1G026900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	709
AasI	GACNNNNNNGTC	1 cut(s)	491
Acc36I	ACCTGC	1 cut(s)	709
AccB1I	GGYRCC	1 cut(s)	559
AccB7I	CCANNNNNTGG	2 cut(s)	556, 1111
AccBSI	CCGCTC	1 cut(s)	288
AccI	GTMKAC	1 cut(s)	309
AccIII	TCCGGA	1 cut(s)	772
AciI	CCGC	6 cut(s)	4, 222, 226, 286, 325, 547
AclWI	GGATC	1 cut(s)	182
AcoI	YGGCCR	1 cut(s)	515
AcsI	RAATTY	1 cut(s)	1353
AcuI	CTGAAG	1 cut(s)	1289
AcyI	GRCGYC	2 cut(s)	540, 560
AdeI	CACNNNGTG	1 cut(s)	556
AfaI	GTAC	1 cut(s)	39
AfiI	CCNNNNNNNGG	4 cut(s)	517, 553, 556, 1111
AgsI	TTSAA	5 cut(s)	54, 607, 640, 802, 956
AjuI	GAANNNNNNNTTGG	2 cut(s)	194, 226
AleI	CACNNNNGTG	1 cut(s)	731
Alw26I	GTCTC	4 cut(s)	153, 499, 1055, 1196
AlwI	GGATC	1 cut(s)	182
AlwNI	CAGNNNCTG	1 cut(s)	703
Aor13HI	TCCGGA	1 cut(s)	772
AoxI	GGCC	4 cut(s)	393, 411, 515, 594
ApeKI	GCWGC	2 cut(s)	826, 1319
ApoI	RAATTY	1 cut(s)	1353
Asp700I	GAANNNNTTC	1 cut(s)	1263
AspLEI	GCGC	1 cut(s)	562
AspS9I	GGNCC	4 cut(s)	394, 412, 594, 613
AsuC2I	CCSGG	1 cut(s)	1224
AsuHPI	GGTGA	6 cut(s)	256, 358, 491, 733, 874, 1261
AvaII	GGWCC	1 cut(s)	613
BanI	GGYRCC	1 cut(s)	559
BbvI	GCAGC	2 cut(s)	813, 1331
BccI	CCATC	2 cut(s)	405, 932
BceAI	ACGGC	1 cut(s)	403
BciVI	GTATCC	1 cut(s)	559
BclI	TGATCA	3 cut(s)	753, 1024, 1344
BcnI	CCSGG	1 cut(s)	1224
BcoDI	GTCTC	4 cut(s)	153, 499, 1055, 1196
BfaI	CTAG	3 cut(s)	792, 1299, 1362
BfoI	RGCGCY	1 cut(s)	563
BfuAI	ACCTGC	1 cut(s)	709
BfuI	GTATCC	1 cut(s)	559
BglII	AGATCT	1 cut(s)	207
BisI	GCNGC	4 cut(s)	5, 222, 827, 1320
BlsI	GCNGC	4 cut(s)	6, 223, 828, 1321
Bme1390I	CCNGG	1 cut(s)	1224
Bme18I	GGWCC	1 cut(s)	613
BmgT120I	GGNCC	4 cut(s)	394, 412, 594, 613
BmiI	GGNNCC	3 cut(s)	561, 614, 1191
BmrFI	CCNGG	1 cut(s)	1224
BmsI	GCATC	4 cut(s)	16, 684, 974, 1023
BpmI	CTGGAG	2 cut(s)	139, 764
BpuEI	CTTGAG	2 cut(s)	260, 314
BpuMI	CCSGG	1 cut(s)	1224
BsaHI	GRCGYC	2 cut(s)	540, 560
BsaI	GGTCTC	2 cut(s)	153, 499
BsaJI	CCNNGG	2 cut(s)	550, 1223
BsaWI	WCCGGW	3 cut(s)	474, 501, 772
Bsc4I	CCNNNNNNNGG	4 cut(s)	517, 553, 556, 1111
Bse118I	RCCGGY	1 cut(s)	517
Bse3DI	GCAATG	1 cut(s)	1135
BseAI	TCCGGA	1 cut(s)	772
BseDI	CCNNGG	2 cut(s)	550, 1223
BseGI	GGATG	6 cut(s)	270, 676, 861, 943, 965, 1038
BseLI	CCNNNNNNNGG	4 cut(s)	517, 553, 556, 1111
BseMI	GCAATG	1 cut(s)	1135
BseMII	CTCAG	1 cut(s)	631
BseRI	GAGGAG	5 cut(s)	185, 244, 308, 311, 1181
BseX3I	CGGCCG	1 cut(s)	515
BseXI	GCAGC	2 cut(s)	813, 1331
BsgI	GTGCAG	1 cut(s)	727
Bsh1285I	CGRYCG	1 cut(s)	518
BshFI	GGCC	4 cut(s)	395, 413, 517, 596
BshNI	GGYRCC	1 cut(s)	559
BsiEI	CGRYCG	1 cut(s)	518
BsiSI	CCGG	8 cut(s)	475, 502, 514, 518, 563, 668, 773, 1223
BslFI	GGGAC	3 cut(s)	319, 551, 626
BslI	CCNNNNNNNGG	4 cut(s)	517, 553, 556, 1111
BsmAI	GTCTC	4 cut(s)	153, 499, 1055, 1196
BsmFI	GGGAC	3 cut(s)	319, 551, 626
BsnI	GGCC	4 cut(s)	395, 413, 517, 596
Bso31I	GGTCTC	2 cut(s)	153, 499
Bsp13I	TCCGGA	1 cut(s)	772
Bsp143I	GATC	6 cut(s)	187, 207, 753, 1024, 1290, 1344
BspACI	CCGC	6 cut(s)	4, 222, 226, 286, 325, 547
BspANI	GGCC	4 cut(s)	395, 413, 517, 596
BspCNI	CTCAG	1 cut(s)	630
BspEI	TCCGGA	1 cut(s)	772
BspLI	GGNNCC	3 cut(s)	561, 614, 1191
BspMI	ACCTGC	1 cut(s)	709
BspPI	GGATC	1 cut(s)	182
BspT107I	GGYRCC	1 cut(s)	559
BspTNI	GGTCTC	2 cut(s)	153, 499
BsrBI	CCGCTC	1 cut(s)	288
BsrDI	GCAATG	1 cut(s)	1135
BsrFI	RCCGGY	1 cut(s)	517
BssAI	RCCGGY	1 cut(s)	517
BssECI	CCNNGG	2 cut(s)	550, 1223
BssMI	GATC	6 cut(s)	187, 207, 753, 1024, 1290, 1344
BssNI	GRCGYC	2 cut(s)	540, 560
Bst4CI	ACNGT	2 cut(s)	37, 901
Bst6I	CTCTTC	2 cut(s)	368, 1230
BstACI	GRCGYC	2 cut(s)	540, 560
BstC8I	GCNNGC	5 cut(s)	226, 282, 286, 519, 980
BstDEI	CTNAG	2 cut(s)	617, 1175
BstDSI	CCRYGG	1 cut(s)	550
BstF5I	GGATG	6 cut(s)	270, 676, 861, 943, 965, 1038
BstH2I	RGCGCY	1 cut(s)	563
BstHHI	GCGC	1 cut(s)	562
BstKTI	GATC	6 cut(s)	190, 210, 756, 1027, 1293, 1347
BstMAI	GTCTC	4 cut(s)	153, 499, 1055, 1196
BstMBI	GATC	6 cut(s)	187, 207, 753, 1024, 1290, 1344
BstMCI	CGRYCG	1 cut(s)	518
BstSCI	CCNGG	1 cut(s)	1222
BstV1I	GCAGC	2 cut(s)	813, 1331
BstX2I	RGATCY	1 cut(s)	207
BstXI	CCANNNNNNTGG	1 cut(s)	1312
BstYI	RGATCY	1 cut(s)	207
BstZI	CGGCCG	1 cut(s)	515
BsuI	GTATCC	1 cut(s)	559
BsuRI	GGCC	4 cut(s)	395, 413, 517, 596
BtgI	CCRYGG	1 cut(s)	550
BtgZI	GCGATG	1 cut(s)	157
BtsCI	GGATG	6 cut(s)	270, 676, 861, 943, 965, 1038
BtsI	GCAGTG	2 cut(s)	726, 939
BtsIMutI	CAGTG	3 cut(s)	625, 726, 939
BveI	ACCTGC	1 cut(s)	709
Cac8I	GCNNGC	5 cut(s)	226, 282, 286, 519, 980
CaiI	CAGNNNCTG	1 cut(s)	703
CfoI	GCGC	1 cut(s)	562
Cfr10I	RCCGGY	1 cut(s)	517
Cfr13I	GGNCC	4 cut(s)	394, 412, 594, 613
CseI	GACGC	1 cut(s)	548
Csp6I	GTAC	1 cut(s)	38
CviAII	CATG	4 cut(s)	134, 1106, 1181, 1358
CviQI	GTAC	1 cut(s)	38
DdeI	CTNAG	2 cut(s)	617, 1175
DinI	GGCGCC	1 cut(s)	561
DpnI	GATC	6 cut(s)	189, 209, 755, 1026, 1292, 1346
DpnII	GATC	6 cut(s)	187, 207, 753, 1024, 1290, 1344
DraIII	CACNNNGTG	1 cut(s)	556
DrdI	GACNNNNNNGTC	1 cut(s)	491
DseDI	GACNNNNNNGTC	1 cut(s)	491
EaeI	YGGCCR	1 cut(s)	515
EagI	CGGCCG	1 cut(s)	515
Eam1104I	CTCTTC	2 cut(s)	368, 1230
EarI	CTCTTC	2 cut(s)	368, 1230
EciI	GGCGGA	1 cut(s)	314
EclXI	CGGCCG	1 cut(s)	515
Eco31I	GGTCTC	2 cut(s)	153, 499
Eco32I	GATATC	1 cut(s)	1071
Eco47I	GGWCC	1 cut(s)	613
Eco52I	CGGCCG	1 cut(s)	515
Eco57I	CTGAAG	1 cut(s)	1289
EcoO109I	RGGNCCY	3 cut(s)	412, 594, 613
EcoRV	GATATC	1 cut(s)	1071
EgeI	GGCGCC	1 cut(s)	561
EheI	GGCGCC	1 cut(s)	561
FaeI	CATG	4 cut(s)	137, 1109, 1184, 1361
FalI	AAGNNNNNCTT	1 cut(s)	1363
FaqI	GGGAC	3 cut(s)	319, 551, 626
FatI	CATG	4 cut(s)	133, 1105, 1180, 1357
FauI	CCCGC	2 cut(s)	233, 293
FbaI	TGATCA	3 cut(s)	753, 1024, 1344
FblI	GTMKAC	1 cut(s)	309
Fnu4HI	GCNGC	4 cut(s)	5, 222, 827, 1320
FokI	GGATG	6 cut(s)	257, 683, 868, 950, 952, 1045
Fsp4HI	GCNGC	4 cut(s)	5, 222, 827, 1320
FspBI	CTAG	3 cut(s)	792, 1299, 1362
GlaI	GCGC	1 cut(s)	561
GluI	GCNGC	4 cut(s)	5, 222, 827, 1320
GsuI	CTGGAG	2 cut(s)	139, 764
HaeII	RGCGCY	1 cut(s)	563
HaeIII	GGCC	4 cut(s)	395, 413, 517, 596
HapII	CCGG	8 cut(s)	475, 502, 514, 518, 563, 668, 773, 1223
HgaI	GACGC	1 cut(s)	548
HhaI	GCGC	1 cut(s)	562
Hin1I	GRCGYC	2 cut(s)	540, 560
Hin1II	CATG	4 cut(s)	137, 1109, 1184, 1361
Hin6I	GCGC	1 cut(s)	560
HinP1I	GCGC	1 cut(s)	560
HincII	GTYRAC	2 cut(s)	310, 1212
HindII	GTYRAC	2 cut(s)	310, 1212
HindIII	AAGCTT	2 cut(s)	842, 1149
HinfI	GANTC	4 cut(s)	159, 478, 677, 776
HpaII	CCGG	8 cut(s)	475, 502, 514, 518, 563, 668, 773, 1223
HphI	GGTGA	6 cut(s)	256, 358, 491, 733, 874, 1261
Hpy166II	GTNNAC	3 cut(s)	310, 724, 1212
Hpy188I	TCNGA	4 cut(s)	187, 588, 687, 1269
Hpy188III	TCNNGA	5 cut(s)	156, 482, 743, 773, 953
Hpy8I	GTNNAC	3 cut(s)	310, 724, 1212
Hpy99I	CGWCG	2 cut(s)	311, 530
HpyCH4III	ACNGT	2 cut(s)	37, 901
HpyCH4IV	ACGT	1 cut(s)	528
HpyCH4V	TGCA	6 cut(s)	450, 626, 697, 708, 889, 1128
HpyF3I	CTNAG	2 cut(s)	617, 1175
HpySE526I	ACGT	1 cut(s)	528
Hsp92I	GRCGYC	2 cut(s)	540, 560
Hsp92II	CATG	4 cut(s)	137, 1109, 1184, 1361
HspAI	GCGC	1 cut(s)	560
KasI	GGCGCC	1 cut(s)	559
Kpn2I	TCCGGA	1 cut(s)	772
KroI	GCCGGC	1 cut(s)	517
KroNI	GCCGGC	1 cut(s)	519
Ksp22I	TGATCA	3 cut(s)	753, 1024, 1344
Kzo9I	GATC	6 cut(s)	187, 207, 753, 1024, 1290, 1344
LmnI	GCTCC	1 cut(s)	293
Lsp1109I	GCAGC	2 cut(s)	813, 1331
LweI	GCATC	4 cut(s)	16, 684, 974, 1023
MaeI	CTAG	3 cut(s)	792, 1299, 1362
MaeII	ACGT	1 cut(s)	528
MaeIII	GTNAC	2 cut(s)	242, 872
MalI	GATC	6 cut(s)	189, 209, 755, 1026, 1292, 1346
MbiI	CCGCTC	1 cut(s)	288
MboI	GATC	6 cut(s)	187, 207, 753, 1024, 1290, 1344
MboII	GAAGA	7 cut(s)	202, 355, 829, 968, 1060, 1247, 1271
MflI	RGATCY	1 cut(s)	207
MluCI	AATT	3 cut(s)	440, 985, 1353
Mly113I	GGCGCC	1 cut(s)	560
MlyI	GAGTC	2 cut(s)	168, 686
MroI	TCCGGA	1 cut(s)	772
MroNI	GCCGGC	1 cut(s)	517
MroXI	GAANNNNTTC	1 cut(s)	1263
MseI	TTAA	1 cut(s)	1116
MslI	CAYNNNNRTG	2 cut(s)	587, 731
MspA1I	CMGCKG	1 cut(s)	826
MspI	CCGG	8 cut(s)	475, 502, 514, 518, 563, 668, 773, 1223
MspR9I	CCNGG	1 cut(s)	1224
NaeI	GCCGGC	1 cut(s)	519
NarI	GGCGCC	1 cut(s)	560
NciI	CCSGG	1 cut(s)	1224
NdeII	GATC	6 cut(s)	187, 207, 753, 1024, 1290, 1344
NgoMIV	GCCGGC	1 cut(s)	517
NlaIII	CATG	4 cut(s)	137, 1109, 1184, 1361
NlaIV	GGNNCC	3 cut(s)	561, 614, 1191
NmuCI	GTSAC	1 cut(s)	242
OliI	CACNNNNGTG	1 cut(s)	731
PaqCI	CACCTGC	1 cut(s)	709
PdiI	GCCGGC	1 cut(s)	519
PdmI	GAANNNNTTC	1 cut(s)	1263
PfeI	GAWTC	2 cut(s)	478, 776
PflMI	CCANNNNNTGG	2 cut(s)	556, 1111
PkrI	GCNGC	4 cut(s)	6, 223, 828, 1321
PleI	GAGTC	2 cut(s)	167, 685
PluTI	GGCGCC	1 cut(s)	563
PpsI	GAGTC	2 cut(s)	167, 685
PpuMI	RGGWCCY	1 cut(s)	613
Psp5II	RGGWCCY	1 cut(s)	613
PspN4I	GGNNCC	3 cut(s)	561, 614, 1191
PspPI	GGNCC	4 cut(s)	394, 412, 594, 613
PspPPI	RGGWCCY	1 cut(s)	613
PstNI	CAGNNNCTG	1 cut(s)	703
PsuI	RGATCY	1 cut(s)	207
PvuII	CAGCTG	1 cut(s)	826
RsaI	GTAC	1 cut(s)	39
RsaNI	GTAC	1 cut(s)	38
RseI	CAYNNNNRTG	2 cut(s)	587, 731
SalI	GTCGAC	1 cut(s)	308
SaqAI	TTAA	1 cut(s)	1116
SatI	GCNGC	4 cut(s)	5, 222, 827, 1320
Sau3AI	GATC	6 cut(s)	187, 207, 753, 1024, 1290, 1344
Sau96I	GGNCC	4 cut(s)	394, 412, 594, 613
SchI	GAGTC	2 cut(s)	168, 686
ScrFI	CCNGG	1 cut(s)	1224
SfaNI	GCATC	4 cut(s)	16, 684, 974, 1023
SfoI	GGCGCC	1 cut(s)	561
SinI	GGWCC	1 cut(s)	613
SmiMI	CAYNNNNRTG	2 cut(s)	587, 731
SmlI	CTYRAG	2 cut(s)	275, 329
SmoI	CTYRAG	2 cut(s)	275, 329
Sse9I	AATT	3 cut(s)	440, 985, 1353
SsiI	CCGC	6 cut(s)	4, 222, 226, 286, 325, 547
SspDI	GGCGCC	1 cut(s)	559
SspMI	CTAG	3 cut(s)	792, 1299, 1362
StyD4I	CCNGG	1 cut(s)	1222
TaaI	ACNGT	2 cut(s)	37, 901
TaiI	ACGT	1 cut(s)	531
TaqI	TCGA	5 cut(s)	213, 309, 444, 483, 525
TasI	AATT	3 cut(s)	440, 985, 1353
TauI	GCSGC	2 cut(s)	7, 224
TfiI	GAWTC	2 cut(s)	478, 776
Tru1I	TTAA	1 cut(s)	1116
Tru9I	TTAA	1 cut(s)	1116
TscAI	CASTG	3 cut(s)	625, 733, 939
TseFI	GTSAC	1 cut(s)	242
TseI	GCWGC	2 cut(s)	826, 1319
Tsp45I	GTSAC	1 cut(s)	242
TspDTI	ATGAA	4 cut(s)	150, 872, 1295, 1346
TspGWI	ACGGA	1 cut(s)	230
TspRI	CASTG	3 cut(s)	625, 733, 939
Van91I	CCANNNNNTGG	2 cut(s)	556, 1111
VpaK11BI	GGWCC	1 cut(s)	613
XapI	RAATTY	1 cut(s)	1353
XcmI	CCANNNNNNNNNTGG	1 cut(s)	140
XmiI	GTMKAC	1 cut(s)	309
XmnI	GAANNNNTTC	1 cut(s)	1263
XspI	CTAG	3 cut(s)	792, 1299, 1362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.