Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0011389

Physical Location & Seq

Genomic Coordinates Forward (+)

54242022 .. 54245022

Gene Structure 3001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G026900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGATGCTTCTACTCTCTCTGCGTTCACCCAAAACCGTACTAACCCTCCCTTCAAAAACCCCACCACTTATCATCTCCTTCTTCTTCCACACCTCCCAACCCCACAACCACCACCCACAAACCCACCATGAAATCATTGGGTCTCCTTCTAGAGTCCAAAAGCTCATCGCTTCCCAATCCGACCCTCTCCTCGCCAAAGAGATCTTCGACTTGGCCGCCCGCCACCCCCATTTCCGTCACTCCTACTCCTCCTACTTCACCCTCATCCTCAAGCTCGCCCGCTCCCACTACTTCTCTCTCGTCGACCACCTCCTCCTCCGCCTCAAGTCCCATACCTACTCCCCCTCCCCGGCTCTCTTCACCCACCTCATCAAAATCTACGGCGAGGCCCATTTGCCCCAGAAGGCCCTCAAAACCTTCTACACAATGCTCCAATTCGACTGCAAACCATCTGTCAAGCACCTCAACCGGATTCTCGACATTCTGGTCTCTCACCGGAACTTCCTCCGGCCTGCTTTCGACGTTTTCAAGGACGCCCACCGCCACGGGGTGGCGCCGGATACTAAATCCTACAACATTCTGATGAGGGCGTTCTGTTTGAATGGGGACCTCAGTGTTGCATACCACCTGTTCAACAAAATGTTTGAGAGAGAGGTTGTGCCGGATGTGGAGTCGTATCGGATTTTGATGCAGGGGCTGTGCAGGAAGGGGCAGGTGAACACTGCTGTGGATTTTCTGGAGGATATGATCAACAAAGGGTTCGTTCCGGATTCGCTGAGTTATACTAGCTTGTTGAATAGCTTGTGTAGGAAGAAACAGCTGCGTGAGGCCTATAAGCTTCTTTGTAGGATGAGGGTGAAGGGGTGTAACCCTGACATTGTGCATTACAATACTGTGATATTGGGGTTTTGTAGGGAAGGGAGGGCAGTGGATGCTTGTAAGGTTCTTGAGGATATGGCATCCAATGGGTGCTTGCCGAATTTGGTGTCGTATAGGACTTTGGTTAGTGGGTTGTCTGATCAGGGGATGCTTGATGAGGCGAAGAACTATATGGAGACGATGATATCAAAGGGGTTTTCTCCACATTTTTCGGTTATCCATGCTTTGGTTAAGGGGTTCTGCAATGTGGGTAGGGTCGAGGAATCTTGTGGAGTTATGGAGGAGATACTAGGGCATGGGGAGGTTCCGCATAGGGAGACTTGGTTGACAATAGTTCCGGGGATATGTGAAGAGATTGAGCTGGTGAGAATGGAAGAAGTTCTGAAAGAGATAATGAAGGTAGAGATCAAGCCTAGCACCAGAATAGTGGAGGCAGCTTTTGGATTGGAGAACTACTTGATCAAAAAAATTCATGCTAGTAAATCAAGGAGAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000301 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0016070 GO:0016192 GO:0016787 GO:0016788 GO:0017119 GO:0022607 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048193 GO:0048213 GO:0051179 GO:0051234 GO:0065003 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0099023 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG4 PPR PPR_2 RINT1_TIP1

Protein Analysis

458

Amino Acids

52.23

Weight (kDa)

9.06

Isoelectric Point (pI)

43.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	93 - 213	4.6e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	135 - 266	5.9e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	156 - 199	1.4e-06	PPR repeat family
PPR_3	PF13812	175 - 231	3.5e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	183 - 214	1.1e-07	PPR repeat
PPR_2	PF13041	186 - 235	2e-14	PPR repeat family
PPR_1	PF12854	218 - 249	2e-08	PPR repeat
PPR_2	PF13041	225 - 270	4.1e-13	PPR repeat family
PPR_3	PF13812	246 - 304	2.7e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	252 - 285	1.7e-08	PPR repeat
PPR_2	PF13041	257 - 293	1.3e-08	PPR repeat family
PPR	PF01535	260 - 289	9.1e-07	PPR repeat
PPR_long	PF17177	271 - 403	2.9e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	287 - 319	1.2e-11	PPR repeat
PPR_2	PF13041	291 - 339	4.3e-14	PPR repeat family
PPR	PF01535	294 - 324	6.5e-06	PPR repeat
PPR_1	PF12854	322 - 354	6.8e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0011389)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01400
fragaria_vesca	FvH4_7g17740 FvH4_7g17740 FvH4_7g17740
malus_domestica	MD01G1088700.v1.1
prunus_persica	Prupe.2G196300_v2.0.a1
pyrus_communis	pycom01g11310
rosa_chinensis	RchiOBHm_Chr1g0361141
rosa_laevigata	RLG00000027746
rosa_multiflora	Rmu_sc0002863.1_g000035 Rmu_sc0020096.1_g000003
rosa_roxburghii	Rroxscaffold_4G00295390
rosa_rugosa	Rorug01G0286000 Rorug02G0035000
rosa_samantha	Rh1AG297500 Rh1BG261600 Rh1CG278900 Rh1DG291400
rosa_wichuraiana	Rw1G026270 Rw1G026900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	703
AasI	GACNNNNNNGTC	1 cut(s)	485
Acc36I	ACCTGC	1 cut(s)	703
AccB1I	GGYRCC	1 cut(s)	553
AccB7I	CCANNNNNTGG	2 cut(s)	550, 1105
AccBSI	CCGCTC	1 cut(s)	282
AccI	GTMKAC	1 cut(s)	303
AccIII	TCCGGA	1 cut(s)	766
AciI	CCGC	6 cut(s)	216, 220, 280, 319, 541, 1187
AcoI	YGGCCR	1 cut(s)	213
AcsI	RAATTY	2 cut(s)	979, 1347
AcyI	GRCGYC	2 cut(s)	534, 554
AdeI	CACNNNGTG	1 cut(s)	550
AfaI	GTAC	1 cut(s)	39
AfiI	CCNNNNNNNGG	4 cut(s)	349, 547, 550, 1105
AgsI	TTSAA	5 cut(s)	54, 529, 601, 634, 796
AjuI	GAANNNNNNNTTGG	2 cut(s)	188, 220
AleI	CACNNNNGTG	1 cut(s)	725
AluBI	AGCT	8 cut(s)	163, 274, 789, 801, 820, 838, 1240, 1316
AluI	AGCT	8 cut(s)	163, 274, 789, 801, 820, 838, 1240, 1316
Alw26I	GTCTC	4 cut(s)	147, 493, 1049, 1190
AlwNI	CAGNNNCTG	1 cut(s)	697
Aor13HI	TCCGGA	1 cut(s)	766
AoxI	GGCC	5 cut(s)	213, 387, 405, 509, 828
ApeKI	GCWGC	2 cut(s)	820, 1313
ApoI	RAATTY	2 cut(s)	979, 1347
ArsI	GACNNNNNNTTYG	4 cut(s)	438, 470, 971, 1003
Asp700I	GAANNNNTTC	1 cut(s)	1257
AspLEI	GCGC	1 cut(s)	556
AspS9I	GGNCC	3 cut(s)	388, 406, 607
AsuC2I	CCSGG	2 cut(s)	350, 1218
AsuHPI	GGTGA	7 cut(s)	18, 250, 352, 485, 727, 868, 1255
AvaII	GGWCC	1 cut(s)	607
BanI	GGYRCC	1 cut(s)	553
BbvI	GCAGC	2 cut(s)	807, 1325
BccI	CCATC	1 cut(s)	457
BceAI	ACGGC	1 cut(s)	397
BciVI	GTATCC	1 cut(s)	553
BclI	TGATCA	3 cut(s)	747, 1018, 1338
BcnI	CCSGG	2 cut(s)	350, 1218
BcoDI	GTCTC	4 cut(s)	147, 493, 1049, 1190
BfaI	CTAG	5 cut(s)	150, 786, 1169, 1293, 1356
BfoI	RGCGCY	1 cut(s)	557
BfuAI	ACCTGC	1 cut(s)	703
BfuI	GTATCC	1 cut(s)	553
BglII	AGATCT	1 cut(s)	201
BisI	GCNGC	3 cut(s)	216, 821, 1314
BlsI	GCNGC	3 cut(s)	217, 822, 1315
Bme1390I	CCNGG	2 cut(s)	350, 1218
Bme18I	GGWCC	1 cut(s)	607
BmgT120I	GGNCC	3 cut(s)	388, 406, 607
BmiI	GGNNCC	3 cut(s)	555, 608, 1185
BmrFI	CCNGG	2 cut(s)	350, 1218
BmsI	GCATC	4 cut(s)	678, 922, 968, 1017
BpmI	CTGGAG	1 cut(s)	758
BpuEI	CTTGAG	3 cut(s)	254, 308, 968
BpuMI	CCSGG	2 cut(s)	350, 1218
BsaHI	GRCGYC	2 cut(s)	534, 554
BsaI	GGTCTC	2 cut(s)	147, 493
BsaJI	CCNNGG	3 cut(s)	348, 544, 1217
BsaWI	WCCGGW	3 cut(s)	468, 495, 766
BsaXI	ACNNNNNCTCC	8 cut(s)	30, 60, 230, 260, 329, 359, 1187, 1217
Bsc4I	CCNNNNNNNGG	4 cut(s)	349, 547, 550, 1105
Bse3DI	GCAATG	1 cut(s)	1129
BseAI	TCCGGA	1 cut(s)	766
BseDI	CCNNGG	3 cut(s)	348, 544, 1217
BseGI	GGATG	6 cut(s)	264, 670, 855, 937, 959, 1032
BseLI	CCNNNNNNNGG	4 cut(s)	349, 547, 550, 1105
BseMI	GCAATG	1 cut(s)	1129
BseMII	CTCAG	2 cut(s)	625, 767
BseRI	GAGGAG	5 cut(s)	179, 238, 302, 305, 1175
BseXI	GCAGC	2 cut(s)	807, 1325
BsgI	GTGCAG	1 cut(s)	721
BshFI	GGCC	5 cut(s)	215, 389, 407, 511, 830
BshNI	GGYRCC	1 cut(s)	553
BsiSI	CCGG	8 cut(s)	350, 469, 496, 508, 557, 662, 767, 1217
BslFI	GGGAC	2 cut(s)	313, 620
BslI	CCNNNNNNNGG	4 cut(s)	349, 547, 550, 1105
BsmAI	GTCTC	4 cut(s)	147, 493, 1049, 1190
BsmBI	CGTCTC	1 cut(s)	1049
BsmFI	GGGAC	2 cut(s)	313, 620
BsnI	GGCC	5 cut(s)	215, 389, 407, 511, 830
Bso31I	GGTCTC	2 cut(s)	147, 493
Bsp13I	TCCGGA	1 cut(s)	766
Bsp143I	GATC	5 cut(s)	201, 747, 1018, 1284, 1338
BspACI	CCGC	6 cut(s)	216, 220, 280, 319, 541, 1187
BspANI	GGCC	5 cut(s)	215, 389, 407, 511, 830
BspCNI	CTCAG	2 cut(s)	624, 768
BspEI	TCCGGA	1 cut(s)	766
BspLI	GGNNCC	3 cut(s)	555, 608, 1185
BspMI	ACCTGC	1 cut(s)	703
BspT107I	GGYRCC	1 cut(s)	553
BspTNI	GGTCTC	2 cut(s)	147, 493
BsrBI	CCGCTC	1 cut(s)	282
BsrDI	GCAATG	1 cut(s)	1129
BssECI	CCNNGG	3 cut(s)	348, 544, 1217
BssMI	GATC	5 cut(s)	201, 747, 1018, 1284, 1338
BssNI	GRCGYC	2 cut(s)	534, 554
Bst4CI	ACNGT	2 cut(s)	37, 895
Bst6I	CTCTTC	2 cut(s)	362, 1224
BstACI	GRCGYC	2 cut(s)	534, 554
BstAPI	GCANNNNNTGC	1 cut(s)	932
BstC8I	GCNNGC	5 cut(s)	220, 276, 280, 513, 974
BstDEI	CTNAG	2 cut(s)	611, 776
BstDSI	CCRYGG	1 cut(s)	544
BstF5I	GGATG	6 cut(s)	264, 670, 855, 937, 959, 1032
BstH2I	RGCGCY	1 cut(s)	557
BstHHI	GCGC	1 cut(s)	556
BstKTI	GATC	5 cut(s)	204, 750, 1021, 1287, 1341
BstMAI	GTCTC	4 cut(s)	147, 493, 1049, 1190
BstMBI	GATC	5 cut(s)	201, 747, 1018, 1284, 1338
BstMWI	GCNNNNNNNGC	1 cut(s)	932
BstSCI	CCNGG	2 cut(s)	348, 1216
BstV1I	GCAGC	2 cut(s)	807, 1325
BstX2I	RGATCY	1 cut(s)	201
BstXI	CCANNNNNNTGG	1 cut(s)	1306
BstYI	RGATCY	1 cut(s)	201
BsuI	GTATCC	1 cut(s)	553
BsuRI	GGCC	5 cut(s)	215, 389, 407, 511, 830
BtgI	CCRYGG	1 cut(s)	544
BtgZI	GCGATG	1 cut(s)	151
BtsCI	GGATG	6 cut(s)	264, 670, 855, 937, 959, 1032
BtsI	GCAGTG	2 cut(s)	720, 933
BtsIMutI	CAGTG	3 cut(s)	619, 720, 933
BveI	ACCTGC	1 cut(s)	703
Cac8I	GCNNGC	5 cut(s)	220, 276, 280, 513, 974
CaiI	CAGNNNCTG	1 cut(s)	697
CfoI	GCGC	1 cut(s)	556
Cfr13I	GGNCC	3 cut(s)	388, 406, 607
CseI	GACGC	1 cut(s)	542
Csp6I	GTAC	1 cut(s)	38
CviAII	CATG	4 cut(s)	128, 1100, 1175, 1352
CviQI	GTAC	1 cut(s)	38
DdeI	CTNAG	2 cut(s)	611, 776
DinI	GGCGCC	1 cut(s)	555
DpnI	GATC	5 cut(s)	203, 749, 1020, 1286, 1340
DpnII	GATC	5 cut(s)	201, 747, 1018, 1284, 1338
DraIII	CACNNNGTG	1 cut(s)	550
DrdI	GACNNNNNNGTC	1 cut(s)	485
DseDI	GACNNNNNNGTC	1 cut(s)	485
EaeI	YGGCCR	1 cut(s)	213
Eam1104I	CTCTTC	2 cut(s)	362, 1224
EarI	CTCTTC	2 cut(s)	362, 1224
EciI	GGCGGA	1 cut(s)	308
Eco147I	AGGCCT	1 cut(s)	830
Eco31I	GGTCTC	2 cut(s)	147, 493
Eco32I	GATATC	1 cut(s)	1065
Eco47I	GGWCC	1 cut(s)	607
EcoO109I	RGGNCCY	2 cut(s)	406, 607
EcoRV	GATATC	1 cut(s)	1065
EgeI	GGCGCC	1 cut(s)	555
EheI	GGCGCC	1 cut(s)	555
Esp3I	CGTCTC	1 cut(s)	1049
FaeI	CATG	4 cut(s)	131, 1103, 1178, 1355
FaqI	GGGAC	2 cut(s)	313, 620
FatI	CATG	4 cut(s)	127, 1099, 1174, 1351
FauI	CCCGC	2 cut(s)	227, 287
FbaI	TGATCA	3 cut(s)	747, 1018, 1338
FblI	GTMKAC	1 cut(s)	303
Fnu4HI	GCNGC	3 cut(s)	216, 821, 1314
FokI	GGATG	6 cut(s)	251, 677, 862, 944, 946, 1039
Fsp4HI	GCNGC	3 cut(s)	216, 821, 1314
FspBI	CTAG	5 cut(s)	150, 786, 1169, 1293, 1356
GlaI	GCGC	1 cut(s)	555
GluI	GCNGC	3 cut(s)	216, 821, 1314
GsuI	CTGGAG	1 cut(s)	758
HaeII	RGCGCY	1 cut(s)	557
HaeIII	GGCC	5 cut(s)	215, 389, 407, 511, 830
HapII	CCGG	8 cut(s)	350, 469, 496, 508, 557, 662, 767, 1217
HgaI	GACGC	1 cut(s)	542
HhaI	GCGC	1 cut(s)	556
Hin1I	GRCGYC	2 cut(s)	534, 554
Hin1II	CATG	4 cut(s)	131, 1103, 1178, 1355
Hin6I	GCGC	1 cut(s)	554
HinP1I	GCGC	1 cut(s)	554
HincII	GTYRAC	2 cut(s)	304, 1206
HindII	GTYRAC	2 cut(s)	304, 1206
HindIII	AAGCTT	1 cut(s)	836
HinfI	GANTC	5 cut(s)	153, 472, 671, 770, 1142
HpaII	CCGG	8 cut(s)	350, 469, 496, 508, 557, 662, 767, 1217
HphI	GGTGA	7 cut(s)	18, 250, 352, 485, 727, 868, 1255
Hpy166II	GTNNAC	4 cut(s)	26, 304, 718, 1206
Hpy188I	TCNGA	5 cut(s)	181, 582, 681, 1018, 1263
Hpy188III	TCNNGA	5 cut(s)	150, 476, 737, 767, 947
Hpy8I	GTNNAC	4 cut(s)	26, 304, 718, 1206
Hpy99I	CGWCG	2 cut(s)	305, 524
HpyAV	CCTTC	9 cut(s)	60, 88, 156, 397, 427, 700, 853, 911, 1270
HpyCH4III	ACNGT	2 cut(s)	37, 895
HpyCH4IV	ACGT	1 cut(s)	522
HpyCH4V	TGCA	6 cut(s)	444, 620, 691, 702, 883, 1122
HpyF10VI	GCNNNNNNNGC	1 cut(s)	932
HpyF3I	CTNAG	2 cut(s)	611, 776
HpySE526I	ACGT	1 cut(s)	522
Hsp92I	GRCGYC	2 cut(s)	534, 554
Hsp92II	CATG	4 cut(s)	131, 1103, 1178, 1355
HspAI	GCGC	1 cut(s)	554
KasI	GGCGCC	1 cut(s)	553
Kpn2I	TCCGGA	1 cut(s)	766
Ksp22I	TGATCA	3 cut(s)	747, 1018, 1338
Kzo9I	GATC	5 cut(s)	201, 747, 1018, 1284, 1338
LmnI	GCTCC	2 cut(s)	287, 435
Lsp1109I	GCAGC	2 cut(s)	807, 1325
LweI	GCATC	4 cut(s)	678, 922, 968, 1017
MaeI	CTAG	5 cut(s)	150, 786, 1169, 1293, 1356
MaeII	ACGT	1 cut(s)	522
MaeIII	GTNAC	2 cut(s)	236, 866
MalI	GATC	5 cut(s)	203, 749, 1020, 1286, 1340
MbiI	CCGCTC	1 cut(s)	282
MboI	GATC	5 cut(s)	201, 747, 1018, 1284, 1338
MboII	GAAGA	8 cut(s)	73, 76, 196, 349, 823, 1054, 1241, 1265
MflI	RGATCY	1 cut(s)	201
MluCI	AATT	3 cut(s)	434, 979, 1347
Mly113I	GGCGCC	1 cut(s)	554
MlyI	GAGTC	2 cut(s)	162, 680
MmeI	TCCRAC	1 cut(s)	204
MroI	TCCGGA	1 cut(s)	766
MroXI	GAANNNNTTC	1 cut(s)	1257
MseI	TTAA	1 cut(s)	1110
MslI	CAYNNNNRTG	2 cut(s)	581, 725
MspA1I	CMGCKG	1 cut(s)	820
MspI	CCGG	8 cut(s)	350, 469, 496, 508, 557, 662, 767, 1217
MspR9I	CCNGG	2 cut(s)	350, 1218
MwoI	GCNNNNNNNGC	1 cut(s)	932
NarI	GGCGCC	1 cut(s)	554
NciI	CCSGG	2 cut(s)	350, 1218
NdeII	GATC	5 cut(s)	201, 747, 1018, 1284, 1338
NlaIII	CATG	4 cut(s)	131, 1103, 1178, 1355
NlaIV	GGNNCC	3 cut(s)	555, 608, 1185
NmuCI	GTSAC	1 cut(s)	236
OliI	CACNNNNGTG	1 cut(s)	725
PaqCI	CACCTGC	1 cut(s)	703
PceI	AGGCCT	1 cut(s)	830
PdmI	GAANNNNTTC	1 cut(s)	1257
PfeI	GAWTC	3 cut(s)	472, 770, 1142
PflMI	CCANNNNNTGG	2 cut(s)	550, 1105
PkrI	GCNGC	3 cut(s)	217, 822, 1315
PleI	GAGTC	2 cut(s)	161, 679
PluTI	GGCGCC	1 cut(s)	557
PpsI	GAGTC	2 cut(s)	161, 679
PpuMI	RGGWCCY	1 cut(s)	607
Psp5II	RGGWCCY	1 cut(s)	607
PspN4I	GGNNCC	3 cut(s)	555, 608, 1185
PspPI	GGNCC	3 cut(s)	388, 406, 607
PspPPI	RGGWCCY	1 cut(s)	607
PstNI	CAGNNNCTG	1 cut(s)	697
PsuI	RGATCY	1 cut(s)	201
PvuII	CAGCTG	1 cut(s)	820
RsaI	GTAC	1 cut(s)	39
RsaNI	GTAC	1 cut(s)	38
RseI	CAYNNNNRTG	2 cut(s)	581, 725
SalI	GTCGAC	1 cut(s)	302
SaqAI	TTAA	1 cut(s)	1110
SatI	GCNGC	3 cut(s)	216, 821, 1314
Sau3AI	GATC	5 cut(s)	201, 747, 1018, 1284, 1338
Sau96I	GGNCC	3 cut(s)	388, 406, 607
SchI	GAGTC	2 cut(s)	162, 680
ScrFI	CCNGG	2 cut(s)	350, 1218
SfaNI	GCATC	4 cut(s)	678, 922, 968, 1017
SfoI	GGCGCC	1 cut(s)	555
SinI	GGWCC	1 cut(s)	607
SmiMI	CAYNNNNRTG	2 cut(s)	581, 725
SmlI	CTYRAG	3 cut(s)	269, 323, 947
SmoI	CTYRAG	3 cut(s)	269, 323, 947
Sse9I	AATT	3 cut(s)	434, 979, 1347
SseBI	AGGCCT	1 cut(s)	830
SsiI	CCGC	6 cut(s)	216, 220, 280, 319, 541, 1187
SspDI	GGCGCC	1 cut(s)	553
SspMI	CTAG	5 cut(s)	150, 786, 1169, 1293, 1356
StuI	AGGCCT	1 cut(s)	830
StyD4I	CCNGG	2 cut(s)	348, 1216
TaaI	ACNGT	2 cut(s)	37, 895
TaiI	ACGT	1 cut(s)	525
TaqI	TCGA	6 cut(s)	207, 303, 438, 477, 519, 1137
TasI	AATT	3 cut(s)	434, 979, 1347
TauI	GCSGC	1 cut(s)	218
TfiI	GAWTC	3 cut(s)	472, 770, 1142
Tru1I	TTAA	1 cut(s)	1110
Tru9I	TTAA	1 cut(s)	1110
TscAI	CASTG	3 cut(s)	619, 727, 933
TseFI	GTSAC	1 cut(s)	236
TseI	GCWGC	2 cut(s)	820, 1313
Tsp45I	GTSAC	1 cut(s)	236
TspDTI	ATGAA	3 cut(s)	144, 1289, 1340
TspGWI	ACGGA	1 cut(s)	224
TspRI	CASTG	3 cut(s)	619, 727, 933
Van91I	CCANNNNNTGG	2 cut(s)	550, 1105
VpaK11BI	GGWCC	1 cut(s)	607
XapI	RAATTY	2 cut(s)	979, 1347
XbaI	TCTAGA	1 cut(s)	149
XcmI	CCANNNNNNNNNTGG	1 cut(s)	134
XmiI	GTMKAC	1 cut(s)	303
XmnI	GAANNNNTTC	1 cut(s)	1257
XspI	CTAG	5 cut(s)	150, 786, 1169, 1293, 1356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.