Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0011389

Physical Location & Seq

Genomic Coordinates Reverse (-)

53354669 .. 53356057

Gene Structure 1389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G026270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGATGTTTCTACTCTCTCTGCGTTCACCCAAAACCGTACTAACCCTCCCTTCAAAAACCCCACCACTTATCATCTCCTTCTTCTTCCACACCTCCCAACCCCAACCCCAACCCCACCACCACCACCCACAAACCCACCATGAAATCATTGGGTCTCCTTCTAGAGTCCAAAAGCTCATCGCTTCCCAATCCGACCCTCTCCTCGCGAAAGAGATCTTCGACTTGGCCGCCCGCCACCCCCATTTCCGTCACTCCTACTCCTCCTACTTCACCCTCATCCTCAAGCTCGCCCGCTCCCACTACTTCTCTCTCGTCGACCACCTCCTCCTCCGCCTCAAGTCCCATACCTACTCCCCCTCCCCGGCTCTCTTCACCCACCTCATCAAAATCTACGGCGAGGCCCATTTGCCCCAGAAGGCCCTCAAAACCTTCTACACAATGTTCCAATTCGACTGCAAACCCTCTGTCAAGCACCTCAACCGGATTCTCGACATTCTGGTCTCTCACCGGAACTGCCTCCGGCCGGCTTTCGACGTTTTCAAGGACGCCCACCGCCACGGGGTGGTGCCGGATACTAAATCCTACAACATTCTGATGAGGGCGTTCTGCTTGAATGGGGACCTCAGTGTTGCATACCACCTGTTCAACAAAATGTTTGAGAGAGAGGTCGTGCCGGATGTGGAGTCGTATCGGATTTTGATGCAGGGGCTGTGCAGGAAGGGGCAGGTGAACACTGCTGTGGATTTTCTGGAGGATATGATCAACAAAGGGTTCGTTCCGGATTCGTTGAGTTACACTAGCTTGTTGAATAGCTTGTGTAGGAAGAAACAGCTGCGGGAGGCGTATAAGCTTCTTTGTAGGATGAAGGTGAAGGGATGTAACCCTGACATTGTGCATTACAATACTGTGATATTGGGGTTTTGTAGAGAAGGGAGGGCAGTGGATGCTTGTAAGGTTCTTGAGGATATGGCATCCAATGGGTGCTTGCCGAATTTGGTGTCGTATAGGACTTTGGTTAGTGGGTTGTCTGATCAGGGGATGCTTGATGAGGCGAAGAACTATATGGAGATGATGATATCAAAGGGGTTTTCTCCACATTTTTCAGTTATTCATGCTTTGGTTAAGGGGTTCTGCAATGTGGGTAGGGTCGAGGAAGCTTGTGGAGTTATGGAGGAGATACTAAGGCATGGGGAGGTTCCGCATAGGGAGACTTGGTTGACAATAGTTCCGGGGATATGTGAAGAGATTGAGCTGGTGAGAATGGAAGAAGTTCTGAAAGAGATAATGAAGGTAGAGATCAAGCCTAGCACCAGAATAGTGGAGGCAGCTTTTGGATTGGAGAACTACTTGATCAAAAAAATTCATGCTAGTAAATCAAGGAGAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000301 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006890 GO:0006891 GO:0006996 GO:0007030 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010256 GO:0012505 GO:0016043 GO:0016070 GO:0016192 GO:0016787 GO:0016788 GO:0017119 GO:0022607 GO:0032991 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048193 GO:0048213 GO:0051179 GO:0051234 GO:0065003 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0099023 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

COG4 PPR PPR_2 RINT1_TIP1

Protein Analysis

462

Amino Acids

52.84

Weight (kDa)

9.08

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	97 - 217	4.4e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	139 - 270	7.9e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	160 - 203	2.2e-06	PPR repeat family
PPR_3	PF13812	179 - 235	7.1e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	187 - 218	5.2e-08	PPR repeat
PPR_2	PF13041	190 - 239	2e-14	PPR repeat family
PPR_1	PF12854	222 - 253	2e-08	PPR repeat
PPR_2	PF13041	225 - 274	9.8e-15	PPR repeat family
PPR_3	PF13812	250 - 308	8.9e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	256 - 289	1.6e-08	PPR repeat
PPR_2	PF13041	261 - 297	3.7e-09	PPR repeat family
PPR	PF01535	264 - 293	5.3e-07	PPR repeat
PPR_long	PF17177	275 - 408	6.2e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	291 - 323	1.2e-11	PPR repeat
PPR_2	PF13041	295 - 343	4.4e-14	PPR repeat family
PPR	PF01535	298 - 328	6.6e-06	PPR repeat
PPR_1	PF12854	326 - 358	7.5e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0011389)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01400
fragaria_vesca	FvH4_7g17740 FvH4_7g17740 FvH4_7g17740
malus_domestica	MD01G1088700.v1.1
prunus_persica	Prupe.2G196300_v2.0.a1
pyrus_communis	pycom01g11310
rosa_chinensis	RchiOBHm_Chr1g0361141
rosa_laevigata	RLG00000027746
rosa_multiflora	Rmu_sc0002863.1_g000035 Rmu_sc0020096.1_g000003
rosa_roxburghii	Rroxscaffold_4G00295390
rosa_rugosa	Rorug01G0286000 Rorug02G0035000
rosa_samantha	Rh1AG297500 Rh1BG261600 Rh1CG278900 Rh1DG291400
rosa_wichuraiana	Rw1G026270 Rw1G026900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	715
AasI	GACNNNNNNGTC	1 cut(s)	497
Acc36I	ACCTGC	1 cut(s)	715
AccB1I	GGYRCC	1 cut(s)	565
AccB7I	CCANNNNNTGG	1 cut(s)	562
AccBSI	CCGCTC	1 cut(s)	294
AccI	GTMKAC	1 cut(s)	315
AccII	CGCG	1 cut(s)	206
AccIII	TCCGGA	1 cut(s)	778
AciI	CCGC	7 cut(s)	228, 232, 292, 331, 553, 835, 1199
AcoI	YGGCCR	2 cut(s)	225, 521
AcsI	RAATTY	2 cut(s)	991, 1359
AcyI	GRCGYC	1 cut(s)	546
AdeI	CACNNNGTG	1 cut(s)	562
AfaI	GTAC	1 cut(s)	39
AfiI	CCNNNNNNNGG	4 cut(s)	361, 523, 559, 562
AgsI	TTSAA	5 cut(s)	54, 541, 613, 646, 808
AleI	CACNNNNGTG	1 cut(s)	737
AluBI	AGCT	9 cut(s)	175, 286, 801, 813, 832, 850, 1157, 1252, 1328
AluI	AGCT	9 cut(s)	175, 286, 801, 813, 832, 850, 1157, 1252, 1328
Alw26I	GTCTC	3 cut(s)	159, 505, 1202
AlwNI	CAGNNNCTG	1 cut(s)	709
Aor13HI	TCCGGA	1 cut(s)	778
AoxI	GGCC	4 cut(s)	225, 399, 417, 521
ApeKI	GCWGC	2 cut(s)	832, 1325
ApoI	RAATTY	2 cut(s)	991, 1359
ArsI	GACNNNNNNTTYG	4 cut(s)	450, 482, 983, 1015
Asp700I	GAANNNNTTC	1 cut(s)	1269
AspS9I	GGNCC	3 cut(s)	400, 418, 619
AsuC2I	CCSGG	2 cut(s)	362, 1230
AsuHPI	GGTGA	7 cut(s)	18, 262, 364, 497, 739, 880, 1267
AvaII	GGWCC	1 cut(s)	619
BanI	GGYRCC	1 cut(s)	565
BbvI	GCAGC	2 cut(s)	819, 1337
BceAI	ACGGC	1 cut(s)	409
BciVI	GTATCC	1 cut(s)	565
BclI	TGATCA	3 cut(s)	759, 1030, 1350
BcnI	CCSGG	2 cut(s)	362, 1230
BcoDI	GTCTC	3 cut(s)	159, 505, 1202
BfaI	CTAG	4 cut(s)	162, 798, 1305, 1368
BfuAI	ACCTGC	1 cut(s)	715
BfuI	GTATCC	1 cut(s)	565
BglII	AGATCT	1 cut(s)	213
BisI	GCNGC	3 cut(s)	228, 833, 1326
BlsI	GCNGC	3 cut(s)	229, 834, 1327
Bme1390I	CCNGG	2 cut(s)	362, 1230
Bme18I	GGWCC	1 cut(s)	619
BmgT120I	GGNCC	3 cut(s)	400, 418, 619
BmiI	GGNNCC	3 cut(s)	567, 620, 1197
BmrFI	CCNGG	2 cut(s)	362, 1230
BmsI	GCATC	4 cut(s)	690, 934, 980, 1029
BpmI	CTGGAG	1 cut(s)	770
BpuEI	CTTGAG	3 cut(s)	266, 320, 980
BpuMI	CCSGG	2 cut(s)	362, 1230
BsaHI	GRCGYC	1 cut(s)	546
BsaI	GGTCTC	2 cut(s)	159, 505
BsaJI	CCNNGG	3 cut(s)	360, 556, 1229
BsaWI	WCCGGW	3 cut(s)	480, 507, 778
BsaXI	ACNNNNNCTCC	8 cut(s)	30, 60, 242, 272, 341, 371, 1199, 1229
Bsc4I	CCNNNNNNNGG	4 cut(s)	361, 523, 559, 562
Bse118I	RCCGGY	1 cut(s)	523
Bse3DI	GCAATG	1 cut(s)	1141
BseAI	TCCGGA	1 cut(s)	778
BseDI	CCNNGG	3 cut(s)	360, 556, 1229
BseGI	GGATG	7 cut(s)	276, 682, 867, 881, 949, 971, 1044
BseLI	CCNNNNNNNGG	4 cut(s)	361, 523, 559, 562
BseMI	GCAATG	1 cut(s)	1141
BseMII	CTCAG	1 cut(s)	637
BseRI	GAGGAG	5 cut(s)	191, 250, 314, 317, 1187
BseX3I	CGGCCG	1 cut(s)	521
BseXI	GCAGC	2 cut(s)	819, 1337
BsgI	GTGCAG	1 cut(s)	733
Bsh1236I	CGCG	1 cut(s)	206
Bsh1285I	CGRYCG	1 cut(s)	524
BshFI	GGCC	4 cut(s)	227, 401, 419, 523
BshNI	GGYRCC	1 cut(s)	565
BsiEI	CGRYCG	1 cut(s)	524
BsiSI	CCGG	9 cut(s)	362, 481, 508, 520, 524, 569, 674, 779, 1229
BslFI	GGGAC	2 cut(s)	325, 632
BslI	CCNNNNNNNGG	4 cut(s)	361, 523, 559, 562
BsmAI	GTCTC	3 cut(s)	159, 505, 1202
BsmFI	GGGAC	2 cut(s)	325, 632
BsnI	GGCC	4 cut(s)	227, 401, 419, 523
Bso31I	GGTCTC	2 cut(s)	159, 505
Bsp13I	TCCGGA	1 cut(s)	778
Bsp143I	GATC	5 cut(s)	213, 759, 1030, 1296, 1350
Bsp68I	TCGCGA	1 cut(s)	206
BspACI	CCGC	7 cut(s)	228, 232, 292, 331, 553, 835, 1199
BspANI	GGCC	4 cut(s)	227, 401, 419, 523
BspCNI	CTCAG	1 cut(s)	636
BspEI	TCCGGA	1 cut(s)	778
BspFNI	CGCG	1 cut(s)	206
BspLI	GGNNCC	3 cut(s)	567, 620, 1197
BspMI	ACCTGC	1 cut(s)	715
BspT107I	GGYRCC	1 cut(s)	565
BspTNI	GGTCTC	2 cut(s)	159, 505
BsrBI	CCGCTC	1 cut(s)	294
BsrDI	GCAATG	1 cut(s)	1141
BsrFI	RCCGGY	1 cut(s)	523
BssAI	RCCGGY	1 cut(s)	523
BssECI	CCNNGG	3 cut(s)	360, 556, 1229
BssMI	GATC	5 cut(s)	213, 759, 1030, 1296, 1350
BssNI	GRCGYC	1 cut(s)	546
Bst4CI	ACNGT	2 cut(s)	37, 907
Bst6I	CTCTTC	2 cut(s)	374, 1236
BstACI	GRCGYC	1 cut(s)	546
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstC8I	GCNNGC	5 cut(s)	232, 288, 292, 525, 986
BstDEI	CTNAG	2 cut(s)	623, 1181
BstDSI	CCRYGG	1 cut(s)	556
BstF5I	GGATG	7 cut(s)	276, 682, 867, 881, 949, 971, 1044
BstFNI	CGCG	1 cut(s)	206
BstKTI	GATC	5 cut(s)	216, 762, 1033, 1299, 1353
BstMAI	GTCTC	3 cut(s)	159, 505, 1202
BstMBI	GATC	5 cut(s)	213, 759, 1030, 1296, 1350
BstMCI	CGRYCG	1 cut(s)	524
BstMWI	GCNNNNNNNGC	1 cut(s)	944
BstSCI	CCNGG	2 cut(s)	360, 1228
BstUI	CGCG	1 cut(s)	206
BstV1I	GCAGC	2 cut(s)	819, 1337
BstX2I	RGATCY	1 cut(s)	213
BstXI	CCANNNNNNTGG	1 cut(s)	1318
BstYI	RGATCY	1 cut(s)	213
BstZI	CGGCCG	1 cut(s)	521
BsuI	GTATCC	1 cut(s)	565
BsuRI	GGCC	4 cut(s)	227, 401, 419, 523
BtgI	CCRYGG	1 cut(s)	556
BtgZI	GCGATG	1 cut(s)	163
BtsCI	GGATG	7 cut(s)	276, 682, 867, 881, 949, 971, 1044
BtsI	GCAGTG	2 cut(s)	732, 945
BtsIMutI	CAGTG	3 cut(s)	631, 732, 945
BtuMI	TCGCGA	1 cut(s)	206
BveI	ACCTGC	1 cut(s)	715
Cac8I	GCNNGC	5 cut(s)	232, 288, 292, 525, 986
CaiI	CAGNNNCTG	1 cut(s)	709
Cfr10I	RCCGGY	1 cut(s)	523
Cfr13I	GGNCC	3 cut(s)	400, 418, 619
CseI	GACGC	1 cut(s)	554
Csp6I	GTAC	1 cut(s)	38
CviAII	CATG	4 cut(s)	140, 1112, 1187, 1364
CviQI	GTAC	1 cut(s)	38
DdeI	CTNAG	2 cut(s)	623, 1181
DpnI	GATC	5 cut(s)	215, 761, 1032, 1298, 1352
DpnII	GATC	5 cut(s)	213, 759, 1030, 1296, 1350
DraIII	CACNNNGTG	1 cut(s)	562
DrdI	GACNNNNNNGTC	1 cut(s)	497
DseDI	GACNNNNNNGTC	1 cut(s)	497
EaeI	YGGCCR	2 cut(s)	225, 521
EagI	CGGCCG	1 cut(s)	521
Eam1104I	CTCTTC	2 cut(s)	374, 1236
EarI	CTCTTC	2 cut(s)	374, 1236
EciI	GGCGGA	1 cut(s)	320
EclXI	CGGCCG	1 cut(s)	521
Eco31I	GGTCTC	2 cut(s)	159, 505
Eco32I	GATATC	1 cut(s)	1077
Eco47I	GGWCC	1 cut(s)	619
Eco52I	CGGCCG	1 cut(s)	521
EcoO109I	RGGNCCY	2 cut(s)	418, 619
EcoRV	GATATC	1 cut(s)	1077
FaeI	CATG	4 cut(s)	143, 1115, 1190, 1367
FaqI	GGGAC	2 cut(s)	325, 632
FatI	CATG	4 cut(s)	139, 1111, 1186, 1363
FauI	CCCGC	3 cut(s)	239, 299, 828
FbaI	TGATCA	3 cut(s)	759, 1030, 1350
FblI	GTMKAC	1 cut(s)	315
Fnu4HI	GCNGC	3 cut(s)	228, 833, 1326
FokI	GGATG	7 cut(s)	263, 689, 874, 888, 956, 958, 1051
Fsp4HI	GCNGC	3 cut(s)	228, 833, 1326
FspBI	CTAG	4 cut(s)	162, 798, 1305, 1368
GluI	GCNGC	3 cut(s)	228, 833, 1326
GsuI	CTGGAG	1 cut(s)	770
HaeIII	GGCC	4 cut(s)	227, 401, 419, 523
HapII	CCGG	9 cut(s)	362, 481, 508, 520, 524, 569, 674, 779, 1229
HgaI	GACGC	1 cut(s)	554
Hin1I	GRCGYC	1 cut(s)	546
Hin1II	CATG	4 cut(s)	143, 1115, 1190, 1367
HincII	GTYRAC	2 cut(s)	316, 1218
HindII	GTYRAC	2 cut(s)	316, 1218
HindIII	AAGCTT	2 cut(s)	848, 1155
HinfI	GANTC	4 cut(s)	165, 484, 683, 782
HpaII	CCGG	9 cut(s)	362, 481, 508, 520, 524, 569, 674, 779, 1229
HphI	GGTGA	7 cut(s)	18, 262, 364, 497, 739, 880, 1267
Hpy166II	GTNNAC	4 cut(s)	26, 316, 730, 1218
Hpy188I	TCNGA	5 cut(s)	193, 594, 693, 1030, 1275
Hpy188III	TCNNGA	6 cut(s)	162, 205, 488, 749, 779, 959
Hpy8I	GTNNAC	4 cut(s)	26, 316, 730, 1218
Hpy99I	CGWCG	2 cut(s)	317, 536
HpyCH4III	ACNGT	2 cut(s)	37, 907
HpyCH4IV	ACGT	1 cut(s)	534
HpyCH4V	TGCA	6 cut(s)	456, 632, 703, 714, 895, 1134
HpyF10VI	GCNNNNNNNGC	1 cut(s)	944
HpyF3I	CTNAG	2 cut(s)	623, 1181
HpySE526I	ACGT	1 cut(s)	534
Hsp92I	GRCGYC	1 cut(s)	546
Hsp92II	CATG	4 cut(s)	143, 1115, 1190, 1367
Kpn2I	TCCGGA	1 cut(s)	778
KroI	GCCGGC	1 cut(s)	523
KroNI	GCCGGC	1 cut(s)	525
Ksp22I	TGATCA	3 cut(s)	759, 1030, 1350
Kzo9I	GATC	5 cut(s)	213, 759, 1030, 1296, 1350
LmnI	GCTCC	1 cut(s)	299
Lsp1109I	GCAGC	2 cut(s)	819, 1337
LweI	GCATC	4 cut(s)	690, 934, 980, 1029
MaeI	CTAG	4 cut(s)	162, 798, 1305, 1368
MaeII	ACGT	1 cut(s)	534
MaeIII	GTNAC	3 cut(s)	248, 791, 878
MalI	GATC	5 cut(s)	215, 761, 1032, 1298, 1352
MbiI	CCGCTC	1 cut(s)	294
MboI	GATC	5 cut(s)	213, 759, 1030, 1296, 1350
MboII	GAAGA	8 cut(s)	73, 76, 208, 361, 835, 1066, 1253, 1277
MflI	RGATCY	1 cut(s)	213
MluCI	AATT	3 cut(s)	446, 991, 1359
MlyI	GAGTC	2 cut(s)	174, 692
MmeI	TCCRAC	1 cut(s)	216
MroI	TCCGGA	1 cut(s)	778
MroNI	GCCGGC	1 cut(s)	523
MroXI	GAANNNNTTC	1 cut(s)	1269
MseI	TTAA	1 cut(s)	1122
MslI	CAYNNNNRTG	2 cut(s)	593, 737
MspA1I	CMGCKG	1 cut(s)	832
MspI	CCGG	9 cut(s)	362, 481, 508, 520, 524, 569, 674, 779, 1229
MspR9I	CCNGG	2 cut(s)	362, 1230
MvnI	CGCG	1 cut(s)	206
MwoI	GCNNNNNNNGC	1 cut(s)	944
NaeI	GCCGGC	1 cut(s)	525
NciI	CCSGG	2 cut(s)	362, 1230
NdeII	GATC	5 cut(s)	213, 759, 1030, 1296, 1350
NgoMIV	GCCGGC	1 cut(s)	523
NlaIII	CATG	4 cut(s)	143, 1115, 1190, 1367
NlaIV	GGNNCC	3 cut(s)	567, 620, 1197
NmuCI	GTSAC	1 cut(s)	248
NruI	TCGCGA	1 cut(s)	206
OliI	CACNNNNGTG	1 cut(s)	737
PaqCI	CACCTGC	1 cut(s)	715
PdiI	GCCGGC	1 cut(s)	525
PdmI	GAANNNNTTC	1 cut(s)	1269
PfeI	GAWTC	2 cut(s)	484, 782
PflMI	CCANNNNNTGG	1 cut(s)	562
PkrI	GCNGC	3 cut(s)	229, 834, 1327
PleI	GAGTC	2 cut(s)	173, 691
PpsI	GAGTC	2 cut(s)	173, 691
PpuMI	RGGWCCY	1 cut(s)	619
Psp5II	RGGWCCY	1 cut(s)	619
PspN4I	GGNNCC	3 cut(s)	567, 620, 1197
PspPI	GGNCC	3 cut(s)	400, 418, 619
PspPPI	RGGWCCY	1 cut(s)	619
PstNI	CAGNNNCTG	1 cut(s)	709
PsuI	RGATCY	1 cut(s)	213
PvuII	CAGCTG	1 cut(s)	832
RruI	TCGCGA	1 cut(s)	206
RsaI	GTAC	1 cut(s)	39
RsaNI	GTAC	1 cut(s)	38
RseI	CAYNNNNRTG	2 cut(s)	593, 737
SalI	GTCGAC	1 cut(s)	314
SaqAI	TTAA	1 cut(s)	1122
SatI	GCNGC	3 cut(s)	228, 833, 1326
Sau3AI	GATC	5 cut(s)	213, 759, 1030, 1296, 1350
Sau96I	GGNCC	3 cut(s)	400, 418, 619
SchI	GAGTC	2 cut(s)	174, 692
ScrFI	CCNGG	2 cut(s)	362, 1230
SfaNI	GCATC	4 cut(s)	690, 934, 980, 1029
SinI	GGWCC	1 cut(s)	619
SmiMI	CAYNNNNRTG	2 cut(s)	593, 737
SmlI	CTYRAG	3 cut(s)	281, 335, 959
SmoI	CTYRAG	3 cut(s)	281, 335, 959
Sse9I	AATT	3 cut(s)	446, 991, 1359
SsiI	CCGC	7 cut(s)	228, 232, 292, 331, 553, 835, 1199
SspMI	CTAG	4 cut(s)	162, 798, 1305, 1368
StyD4I	CCNGG	2 cut(s)	360, 1228
TaaI	ACNGT	2 cut(s)	37, 907
TaiI	ACGT	1 cut(s)	537
TaqI	TCGA	6 cut(s)	219, 315, 450, 489, 531, 1149
TasI	AATT	3 cut(s)	446, 991, 1359
TauI	GCSGC	1 cut(s)	230
TfiI	GAWTC	2 cut(s)	484, 782
Tru1I	TTAA	1 cut(s)	1122
Tru9I	TTAA	1 cut(s)	1122
TscAI	CASTG	3 cut(s)	631, 739, 945
TseFI	GTSAC	1 cut(s)	248
TseI	GCWGC	2 cut(s)	832, 1325
Tsp45I	GTSAC	1 cut(s)	248
TspDTI	ATGAA	5 cut(s)	156, 878, 1100, 1301, 1352
TspGWI	ACGGA	1 cut(s)	236
TspRI	CASTG	3 cut(s)	631, 739, 945
Van91I	CCANNNNNTGG	1 cut(s)	562
VpaK11BI	GGWCC	1 cut(s)	619
XapI	RAATTY	2 cut(s)	991, 1359
XbaI	TCTAGA	1 cut(s)	161
XcmI	CCANNNNNNNNNTGG	1 cut(s)	146
XmiI	GTMKAC	1 cut(s)	315
XmnI	GAANNNNTTC	1 cut(s)	1269
XspI	CTAG	4 cut(s)	162, 798, 1305, 1368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.