Rroxscaffold_4G00298460

Putative S-adenosyl-L-methionine-dependent methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0016654
Physical Location & Seq
Reverse (-)
18316624 .. 18319884
3261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00298460.1

Sequence Viewer

Length: 1884 bp
ATGTCCCCCCCTCCCTCCTCCCCCTCCTCAAATTACCTCACTACCCTCGGCCTCGGCTACGCCATAGCCATCGCCCTTGGCTTTCTCGTCCTTCTCTCCACACTCCTCCTCGCCTCCTACATCTGCTGCCGCGTCTCCCGCCACCACCGCTCTCAAACCCAAAACCAAAACCAAACCCAAAACCCCAACTCCCCGGAGGGCGTCATCCTCCCCCGAATCATCTTCGTCGCGGAGGACGACGACGAGAACCAAGAAAACGACGATGAGAACTCCGTCGTCGGCCTCCACCAGAACGTCATCAACTCCTACCCCAAGTTCCCCTTCTCCAAGGAAATCGGCGGCGGTGATGCCTCCACGTGCTCCATCTGCCTTTGCGATTACCACGAATTCGAGATGCTGAGGATGATGCCCGAGTGCCGCCACCACTTCCACCTATTGTGTCTCGACGCGTGGCTCAAGCTCAACGGCTCCTGCCCCGTCTGCCGTAACTCGCCGCTGCCGACTCCGCTGTCAACGCCGCTGCAGGAGGTGGTGCCGCTGAGCCAGCACGCCGCCGATCGGAGATGGAGGAGATCATTTCATGTTACTGATACCTTCTGCAACTATGTAAATACTGATAGTCAAAGCAGGATTGACAGTCATGTAAAAGTCACTCTCGAAACTGTGATTCAGAAACTCCAACAGGAACTTAACACGTTCAGAGATTCAACAACAGATTCGTCGTCATCTGCGCATTTGTTAAAGCACAGTACGTTTCTTGCTGATATTTTGGGGCTGATCGAGACGGTGCACGAATCTCTGGTGCAGAATGATGAGACGCCTCAGAAGTTTAGCAATGATGTCGAAGACATCCATCCTCTGCTAAAACCGAAGCAGCACTCTGATGAGCCTGCGGAGTATTTTCTAATAGAAGAGATTCGGAAGTATGTCAAGATCAAGCCGAACAGATTGGGAAAGCAGAATTTCATGGGAGCTAATGGGACTTTCACTAGCATTGGCCATGCTTGCTTTGCTATGAAGACAGAACTTGAAGAATACATGAACTACGACATTGGCGATATCTGCAATGACGATTGGAAGCTAGCTCAGAAGCTCATGGTTCATGGATGCGATCCACTTCCGAGGAGGAGGTGCTTCGCTCTGGCCCCGAAGATATATAGCAAGCCATTCCCAATCCATGAGTCCATGTGGCAGCTCCCAGACAATAGAAATGTCCGGTGGAGTCAGTATCGGTGCAAGAACTTTACTTGCCTCGCAAGTAATTCCGCTCCCAAGGGGTTCTTCAAATGTGCAGATTGCTTCAATCTGTCACACCACGAAATGCCTAGATGGATGCAACAAGTAAGTCTAGACTCAAAATTGAATCTGACTGCAGATTTTCTTATCCCTGAAGTGCTTCAAATCAAGCCGGGAGAGATCAGAATCGGACTGGATTTTAGCGTAGGGACTGGGACTTTTGCAGCTAGGATGAGGGAGTTCAATGTCACCATTGTCTCGGCAACTATCAATCTTGGGGCACCTTTTAATGAAATGATAGCTCTTCGTGGACTCGTCCCTCTTTACTTGACAATCAATCAACGGCTGCCATTCTTCGACAACACTCTGGATTTGATTCACACCACAAGATTTCTGGATGGCTGGATTGATTTTGTGCTGCTAGACTTTGTATTGTATGATTGGGATAGAGTTTTGAGGCCTGGGGGTTTGCTGTGGATTGATAGCTTCTTCTGTGTGAAAGAAGATTTGAATGCTTATTTGGAGTCCCTTAAGATGCTGAGGTACAAGAAGCACAAATGGGTTGTTGTTCCAAAGATTGATAAAGATGATGATAGAGAGGTTTTCTTTTCTGCTGTTCTAGAAAAGCCGCCTAGACCATTCCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_29 zf-RING_2

Protein Analysis

627

Amino Acids

71.85

Weight (kDa)

6.13

Isoelectric Point (pI)

49.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 119 - 162 2.9e-11 Ring finger domain
Methyltransf_29 PF03141 467 - 590 1e-05 Putative S-adenosyl-L-methionine-dependent methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016654)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01240
fragaria_vesca FvH4_7g15510
malus_domestica MD07G1130500.v1.1
prunus_persica Prupe.2G178700_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0357841
rosa_laevigata RLG00000027992
rosa_multiflora Rmu_sc0002071.1_g000002 Rmu_sc0011109.1_g000006
rosa_roxburghii Rroxscaffold_4G00298460
rosa_rugosa Rorug01G0258900
rosa_samantha Rh1AG272900 Rh1BG240200 Rh1DG268500
rosa_wichuraiana Rw1G024360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 508
Acc16I TGCGCA 1 cut(s) 732
AccB1I GGYRCC 2 cut(s) 532, 1516
AccBSI CCGCTC 2 cut(s) 150, 1268
AccII CGCG 3 cut(s) 132, 230, 449
AclWI GGATC 1 cut(s) 1106
AcoI YGGCCR 1 cut(s) 997
AcsI RAATTY 2 cut(s) 386, 961
AcuI CTGAAG 1 cut(s) 1410
AcvI CACGTG 1 cut(s) 357
AcyI GRCGYC 2 cut(s) 201, 818
AfaI GTAC 2 cut(s) 751, 1781
AfiI CCNNNNNNNGG 1 cut(s) 558
AflII CTTAAG 1 cut(s) 1766
AflIII ACRYGT 2 cut(s) 447, 693
AgsI TTSAA 8 cut(s) 708, 1031, 1285, 1303, 1363, 1400, 1480, 1747
AjnI CCWGG 1 cut(s) 1696
AjuI GAANNNNNNNTTGG 6 cut(s) 305, 337, 1265, 1297, 1739, 1771
AluBI AGCT 9 cut(s) 460, 974, 1081, 1085, 1093, 1195, 1463, 1538, 1722
AluI AGCT 9 cut(s) 460, 974, 1081, 1085, 1093, 1195, 1463, 1538, 1722
Alw21I GWGCWC 2 cut(s) 362, 792
Alw26I GTCTC 5 cut(s) 139, 446, 776, 809, 1498
Alw44I GTGCAC 1 cut(s) 788
AlwI GGATC 1 cut(s) 1106
Ama87I CYCGRG 1 cut(s) 410
AoxI GGCC 5 cut(s) 49, 280, 997, 1143, 1694
ApaLI GTGCAC 1 cut(s) 788
ApeKI GCWGC 8 cut(s) 126, 496, 520, 874, 1192, 1460, 1582, 1654
ApoI RAATTY 2 cut(s) 386, 961
Asp700I GAANNNNTTC 2 cut(s) 915, 1395
AspLEI GCGC 1 cut(s) 733
AspS9I GGNCC 1 cut(s) 1144
AsuC2I CCSGG 2 cut(s) 194, 1410
AsuHPI GGTGA 2 cut(s) 356, 1477
AsuNHI GCTAGC 1 cut(s) 1081
AvaI CYCGRG 1 cut(s) 410
BaeGI GKGCMC 2 cut(s) 792, 1519
BalI TGGCCA 1 cut(s) 999
BanI GGYRCC 2 cut(s) 532, 1516
BbrPI CACGTG 1 cut(s) 357
BbsI GAAGAC 2 cut(s) 852, 1025
Bbv12I GWGCWC 2 cut(s) 362, 792
BbvCI CCTCAGC 2 cut(s) 398, 1775
BbvI GCAGC 8 cut(s) 113, 483, 507, 886, 1204, 1472, 1569, 1641
BccI CCATC 6 cut(s) 77, 371, 558, 861, 1323, 1628
BceAI ACGGC 3 cut(s) 468, 481, 1595
BcgI CGANNNNNNTGC 2 cut(s) 823, 857
BciT130I CCWGG 1 cut(s) 1698
BcnI CCSGG 2 cut(s) 194, 1410
BcoDI GTCTC 5 cut(s) 139, 446, 776, 809, 1498
BfaI CTAG 8 cut(s) 990, 1082, 1326, 1349, 1464, 1658, 1856, 1869
BfmI CTRYAG 2 cut(s) 521, 1371
BfrI CTTAAG 1 cut(s) 1766
BlpI GCTNAGC 1 cut(s) 539
Bme1390I CCNGG 3 cut(s) 194, 1410, 1698
BmeT110I CYCGRG 1 cut(s) 410
BmgT120I GGNCC 1 cut(s) 1144
BmiI GGNNCC 4 cut(s) 469, 534, 1146, 1518
BmrFI CCNGG 3 cut(s) 194, 1410, 1698
BmrI ACTGGG 1 cut(s) 1458
BmsI GCATC 6 cut(s) 337, 384, 396, 1097, 1323, 1761
BmtI GCTAGC 1 cut(s) 1085
BmuI ACTGGG 1 cut(s) 1458
BpiI GAAGAC 2 cut(s) 852, 1025
Bpu10I CCTNAGC 2 cut(s) 398, 1775
Bpu1102I GCTNAGC 1 cut(s) 539
BpuEI CTTGAG 1 cut(s) 440
BpuMI CCSGG 2 cut(s) 194, 1410
BsaAI YACGTR 1 cut(s) 357
BsaBI GATNNNNATC 1 cut(s) 1421
BsaHI GRCGYC 2 cut(s) 201, 818
BsaJI CCNNGG 8 cut(s) 46, 52, 76, 192, 327, 1121, 1272, 1697
BsaWI WCCGGW 2 cut(s) 1215, 1878
BsaXI ACNNNNNCTCC 2 cut(s) 173, 203
Bsc4I CCNNNNNNNGG 1 cut(s) 558
Bse1I ACTGG 2 cut(s) 1434, 1453
Bse3DI GCAATG 2 cut(s) 841, 1072
Bse8I GATNNNNATC 1 cut(s) 1421
BseBI CCWGG 1 cut(s) 1698
BseDI CCNNGG 8 cut(s) 46, 52, 76, 192, 327, 1121, 1272, 1697
BseGI GGATG 8 cut(s) 204, 408, 849, 853, 1112, 1338, 1473, 1639
BseJI GATNNNNATC 1 cut(s) 1421
BseLI CCNNNNNNNGG 1 cut(s) 558
BseMI GCAATG 2 cut(s) 841, 1072
BseMII CTCAG 5 cut(s) 389, 530, 836, 1100, 1766
BseNI ACTGG 2 cut(s) 1434, 1453
BseRI GAGGAG 7 cut(s) 7, 16, 95, 98, 583, 1138, 1141
BseSI GKGCMC 2 cut(s) 792, 1519
BseXI GCAGC 8 cut(s) 113, 483, 507, 886, 1204, 1472, 1569, 1641
BsgI GTGCAG 2 cut(s) 824, 1311
Bsh1236I CGCG 3 cut(s) 132, 230, 449
Bsh1285I CGRYCG 1 cut(s) 559
BshFI GGCC 5 cut(s) 51, 282, 999, 1145, 1696
BshNI GGYRCC 2 cut(s) 532, 1516
BsiEI CGRYCG 1 cut(s) 559
BsiHKAI GWGCWC 2 cut(s) 362, 792
BsiHKCI CYCGRG 1 cut(s) 410
BsiSI CCGG 4 cut(s) 194, 1216, 1409, 1879
BslFI GGGAC 5 cut(s) 994, 1459, 1465, 1538, 1747
BslI CCNNNNNNNGG 1 cut(s) 558
BsmAI GTCTC 5 cut(s) 139, 446, 776, 809, 1498
BsmBI CGTCTC 3 cut(s) 139, 776, 809
BsmFI GGGAC 5 cut(s) 994, 1459, 1465, 1538, 1747
BsmI GAATGC 1 cut(s) 1753
BsnI GGCC 5 cut(s) 51, 282, 999, 1145, 1696
BsoBI CYCGRG 1 cut(s) 410
Bsp1286I GDGCHC 3 cut(s) 362, 792, 1519
Bsp143I GATC 6 cut(s) 556, 572, 777, 933, 1111, 1416
Bsp1720I GCTNAGC 1 cut(s) 539
BspANI GGCC 5 cut(s) 51, 282, 999, 1145, 1696
BspCNI CTCAG 5 cut(s) 390, 531, 835, 1099, 1767
BspFNI CGCG 3 cut(s) 132, 230, 449
BspLI GGNNCC 4 cut(s) 469, 534, 1146, 1518
BspMAI CTGCAG 2 cut(s) 525, 1375
BspOI GCTAGC 1 cut(s) 1085
BspPI GGATC 1 cut(s) 1106
BspQI GCTCTTC 1 cut(s) 1545
BspT107I GGYRCC 2 cut(s) 532, 1516
BspTI CTTAAG 1 cut(s) 1766
BsrBI CCGCTC 2 cut(s) 150, 1268
BsrDI GCAATG 2 cut(s) 841, 1072
BsrI ACTGG 2 cut(s) 1434, 1453
BssECI CCNNGG 8 cut(s) 46, 52, 76, 192, 327, 1121, 1272, 1697
BssMI GATC 6 cut(s) 556, 572, 777, 933, 1111, 1416
BssNI GRCGYC 2 cut(s) 201, 818
BssT1I CCWWGG 3 cut(s) 76, 327, 1272
Bst2UI CCWGG 1 cut(s) 1698
Bst4CI ACNGT 4 cut(s) 638, 664, 749, 787
Bst6I CTCTTC 2 cut(s) 906, 1545
BstACI GRCGYC 2 cut(s) 201, 818
BstAFI CTTAAG 1 cut(s) 1766
BstBAI YACGTR 1 cut(s) 357
BstC8I GCNNGC 6 cut(s) 545, 549, 891, 1006, 1083, 1163
BstDEI CTNAG 5 cut(s) 398, 539, 822, 1086, 1775
BstF5I GGATG 8 cut(s) 204, 408, 849, 853, 1112, 1338, 1473, 1639
BstFNI CGCG 3 cut(s) 132, 230, 449
BstHHI GCGC 1 cut(s) 733
BstKTI GATC 6 cut(s) 559, 575, 780, 936, 1114, 1419
BstMAI GTCTC 5 cut(s) 139, 446, 776, 809, 1498
BstMBI GATC 6 cut(s) 556, 572, 777, 933, 1111, 1416
BstMCI CGRYCG 1 cut(s) 559
BstNI CCWGG 1 cut(s) 1698
BstSCI CCNGG 3 cut(s) 192, 1408, 1696
BstSFI CTRYAG 2 cut(s) 521, 1371
BstSLI GKGCMC 2 cut(s) 792, 1519
BstUI CGCG 3 cut(s) 132, 230, 449
BstV1I GCAGC 8 cut(s) 113, 483, 507, 886, 1204, 1472, 1569, 1641
BstV2I GAAGAC 2 cut(s) 852, 1025
BsuRI GGCC 5 cut(s) 51, 282, 999, 1145, 1696
BtgZI GCGATG 1 cut(s) 55
BtsCI GGATG 8 cut(s) 204, 408, 849, 853, 1112, 1338, 1473, 1639
Cac8I GCNNGC 6 cut(s) 545, 549, 891, 1006, 1083, 1163
CfoI GCGC 1 cut(s) 733
Cfr13I GGNCC 1 cut(s) 1144
CseI GACGC 4 cut(s) 121, 190, 455, 826
Csp6I GTAC 2 cut(s) 750, 1780
CviAII CATG 9 cut(s) 581, 641, 967, 1001, 1039, 1096, 1103, 1178, 1186
CviQI GTAC 2 cut(s) 750, 1780
DdeI CTNAG 5 cut(s) 398, 539, 822, 1086, 1775
DpnI GATC 6 cut(s) 558, 574, 779, 935, 1113, 1418
DpnII GATC 6 cut(s) 556, 572, 777, 933, 1111, 1416
DrdI GACNNNNNNGTC 1 cut(s) 508
DseDI GACNNNNNNGTC 1 cut(s) 508
EaeI YGGCCR 1 cut(s) 997
Eam1104I CTCTTC 2 cut(s) 906, 1545
EarI CTCTTC 2 cut(s) 906, 1545
Eco130I CCWWGG 3 cut(s) 76, 327, 1272
Eco147I AGGCCT 1 cut(s) 1696
Eco32I GATATC 1 cut(s) 1060
Eco57I CTGAAG 1 cut(s) 1410
Eco72I CACGTG 1 cut(s) 357
Eco88I CYCGRG 1 cut(s) 410
EcoRI GAATTC 1 cut(s) 386
EcoRII CCWGG 1 cut(s) 1696
EcoRV GATATC 1 cut(s) 1060
EcoT14I CCWWGG 3 cut(s) 76, 327, 1272
ErhI CCWWGG 3 cut(s) 76, 327, 1272
Esp3I CGTCTC 3 cut(s) 139, 776, 809
FaeI CATG 9 cut(s) 584, 644, 970, 1004, 1042, 1099, 1106, 1181, 1189
FalI AAGNNNNNCTT 4 cut(s) 305, 337, 1265, 1297
FaqI GGGAC 5 cut(s) 994, 1459, 1465, 1538, 1747
FatI CATG 9 cut(s) 580, 640, 966, 1000, 1038, 1095, 1102, 1177, 1185
FauI CCCGC 1 cut(s) 146
FokI GGATG 8 cut(s) 191, 415, 836, 840, 1119, 1345, 1480, 1646
FspBI CTAG 8 cut(s) 990, 1082, 1326, 1349, 1464, 1658, 1856, 1869
FspI TGCGCA 1 cut(s) 732
GlaI GCGC 1 cut(s) 732
HaeIII GGCC 5 cut(s) 51, 282, 999, 1145, 1696
HapII CCGG 4 cut(s) 194, 1216, 1409, 1879
HgaI GACGC 4 cut(s) 121, 190, 455, 826
HhaI GCGC 1 cut(s) 733
Hin1I GRCGYC 2 cut(s) 201, 818
Hin1II CATG 9 cut(s) 584, 644, 970, 1004, 1042, 1099, 1106, 1181, 1189
Hin6I GCGC 1 cut(s) 731
HinP1I GCGC 1 cut(s) 731
HincII GTYRAC 1 cut(s) 513
HindII GTYRAC 1 cut(s) 513
HpaII CCGG 4 cut(s) 194, 1216, 1409, 1879
HphI GGTGA 2 cut(s) 356, 1477
Hpy166II GTNNAC 3 cut(s) 513, 790, 1547
Hpy188III TCNNGA 9 cut(s) 391, 443, 656, 781, 931, 1349, 1604, 1631, 1856
Hpy8I GTNNAC 3 cut(s) 513, 790, 1547
Hpy99I CGWCG 8 cut(s) 230, 242, 245, 263, 278, 281, 449, 724
HpyAV CCTTC 3 cut(s) 101, 331, 604
HpyCH4III ACNGT 4 cut(s) 638, 664, 749, 787
HpyCH4IV ACGT 4 cut(s) 294, 356, 695, 752
HpyF3I CTNAG 5 cut(s) 398, 539, 822, 1086, 1775
HpySE526I ACGT 4 cut(s) 294, 356, 695, 752
Hsp92I GRCGYC 2 cut(s) 201, 818
Hsp92II CATG 9 cut(s) 584, 644, 970, 1004, 1042, 1099, 1106, 1181, 1189
HspAI GCGC 1 cut(s) 731
Kzo9I GATC 6 cut(s) 556, 572, 777, 933, 1111, 1416
LguI GCTCTTC 1 cut(s) 1545
LmnI GCTCC 5 cut(s) 365, 473, 971, 1200, 1273
Lsp1109I GCAGC 8 cut(s) 113, 483, 507, 886, 1204, 1472, 1569, 1641
LweI GCATC 6 cut(s) 337, 384, 396, 1097, 1323, 1761
MaeI CTAG 8 cut(s) 990, 1082, 1326, 1349, 1464, 1658, 1856, 1869
MaeII ACGT 4 cut(s) 294, 356, 695, 752
MaeIII GTNAC 5 cut(s) 485, 583, 649, 1308, 1483
MalI GATC 6 cut(s) 558, 574, 779, 935, 1113, 1418
MbiI CCGCTC 2 cut(s) 150, 1268
MboI GATC 6 cut(s) 556, 572, 777, 933, 1111, 1416
MhlI GDGCHC 3 cut(s) 362, 792, 1519
MlsI TGGCCA 1 cut(s) 999
MluCI AATT 5 cut(s) 31, 386, 961, 1261, 1358
MluI ACGCGT 1 cut(s) 447
MluNI TGGCCA 1 cut(s) 999
MlyI GAGTC 6 cut(s) 496, 1190, 1231, 1346, 1542, 1769
MmeI TCCRAC 1 cut(s) 703
Mox20I TGGCCA 1 cut(s) 999
MroXI GAANNNNTTC 2 cut(s) 915, 1395
MscI TGGCCA 1 cut(s) 999
MseI TTAA 4 cut(s) 690, 740, 1524, 1767
MslI CAYNNNNRTG 1 cut(s) 882
Msp20I TGGCCA 1 cut(s) 999
MspA1I CMGCKG 4 cut(s) 496, 508, 520, 538
MspCI CTTAAG 1 cut(s) 1766
MspI CCGG 4 cut(s) 194, 1216, 1409, 1879
MspR9I CCNGG 3 cut(s) 194, 1410, 1698
Mva1269I GAATGC 1 cut(s) 1753
MvaI CCWGG 1 cut(s) 1698
MvnI CGCG 3 cut(s) 132, 230, 449
NciI CCSGG 2 cut(s) 194, 1410
NdeII GATC 6 cut(s) 556, 572, 777, 933, 1111, 1416
NheI GCTAGC 1 cut(s) 1081
NlaIII CATG 9 cut(s) 584, 644, 970, 1004, 1042, 1099, 1106, 1181, 1189
NlaIV GGNNCC 4 cut(s) 469, 534, 1146, 1518
NmeAIII GCCGAG 3 cut(s) 27, 33, 1475
NmuCI GTSAC 3 cut(s) 649, 1308, 1483
NsbI TGCGCA 1 cut(s) 732
PceI AGGCCT 1 cut(s) 1696
PciSI GCTCTTC 1 cut(s) 1545
PcsI WCGNNNNNNNCGW 3 cut(s) 234, 497, 1053
PctI GAATGC 1 cut(s) 1753
PdmI GAANNNNTTC 2 cut(s) 915, 1395
PfeI GAWTC 9 cut(s) 216, 667, 704, 716, 794, 916, 1363, 1422, 1612
Ple19I CGATCG 1 cut(s) 559
PleI GAGTC 6 cut(s) 496, 1189, 1230, 1346, 1542, 1768
PmaCI CACGTG 1 cut(s) 357
PmlI CACGTG 1 cut(s) 357
PpsI GAGTC 6 cut(s) 496, 1189, 1230, 1346, 1542, 1768
Ppu21I YACGTR 1 cut(s) 357
Psp6I CCWGG 1 cut(s) 1696
PspCI CACGTG 1 cut(s) 357
PspGI CCWGG 1 cut(s) 1696
PspN4I GGNNCC 4 cut(s) 469, 534, 1146, 1518
PspPI GGNCC 1 cut(s) 1144
PstI CTGCAG 2 cut(s) 525, 1375
PvuI CGATCG 1 cut(s) 559
RsaI GTAC 2 cut(s) 751, 1781
RsaNI GTAC 2 cut(s) 750, 1780
RseI CAYNNNNRTG 1 cut(s) 882
SapI GCTCTTC 1 cut(s) 1545
SaqAI TTAA 4 cut(s) 690, 740, 1524, 1767
Sau3AI GATC 6 cut(s) 556, 572, 777, 933, 1111, 1416
Sau96I GGNCC 1 cut(s) 1144
SchI GAGTC 6 cut(s) 496, 1190, 1231, 1346, 1542, 1769
ScrFI CCNGG 3 cut(s) 194, 1410, 1698
SduI GDGCHC 3 cut(s) 362, 792, 1519
SfaNI GCATC 6 cut(s) 337, 384, 396, 1097, 1323, 1761
SfcI CTRYAG 2 cut(s) 521, 1371
SmiMI CAYNNNNRTG 1 cut(s) 882
SmlI CTYRAG 2 cut(s) 455, 1766
SmoI CTYRAG 2 cut(s) 455, 1766
Sse9I AATT 5 cut(s) 31, 386, 961, 1261, 1358
SseBI AGGCCT 1 cut(s) 1696
SspMI CTAG 8 cut(s) 990, 1082, 1326, 1349, 1464, 1658, 1856, 1869
StuI AGGCCT 1 cut(s) 1696
StyD4I CCNGG 3 cut(s) 192, 1408, 1696
StyI CCWWGG 3 cut(s) 76, 327, 1272
TaaI ACNGT 4 cut(s) 638, 664, 749, 787
TaiI ACGT 4 cut(s) 297, 359, 698, 755
TaqI TCGA 6 cut(s) 390, 444, 657, 780, 843, 1593
TasI AATT 5 cut(s) 31, 386, 961, 1261, 1358
TauI GCSGC 8 cut(s) 132, 342, 420, 496, 520, 538, 554, 1867
TfiI GAWTC 9 cut(s) 216, 667, 704, 716, 794, 916, 1363, 1422, 1612
Tru1I TTAA 4 cut(s) 690, 740, 1524, 1767
Tru9I TTAA 4 cut(s) 690, 740, 1524, 1767
TseFI GTSAC 3 cut(s) 649, 1308, 1483
TseI GCWGC 8 cut(s) 126, 496, 520, 874, 1192, 1460, 1582, 1654
Tsp45I GTSAC 3 cut(s) 649, 1308, 1483
TspDTI ATGAA 6 cut(s) 569, 955, 1031, 1055, 1091, 1542
TspGWI ACGGA 1 cut(s) 262
Vha464I CTTAAG 1 cut(s) 1766
VneI GTGCAC 1 cut(s) 788
XapI RAATTY 2 cut(s) 386, 961
XbaI TCTAGA 2 cut(s) 1348, 1855
XcmI CCANNNNNNNNNTGG 1 cut(s) 1627
XmnI GAANNNNTTC 2 cut(s) 915, 1395
XspI CTAG 8 cut(s) 990, 1082, 1326, 1349, 1464, 1658, 1856, 1869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.