Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0004439

Physical Location & Seq

Genomic Coordinates Reverse (-)

23685142 .. 23742528

Gene Structure 57387 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00303300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGGGACGATCCAGAAAAATGAGTCCCTGAATTACTGGAGGGAGTTTTTTGCCGCTGCAAAAAACTCCACCATTTTTGATGTTCTAGACCGGGCCATCACCCTCGCCGCCTCCGATTTTCCGGAGGAGTTCAGTCGCCAAAGGAGTCGAATTCTCGGTTCGATTCAGGGTTTGGGCGGCGGTGATGATCGGCGCTCCGATCTAGGGTTTGGTACAGGATCTGAAACTGGGTCGGAACAAAAGGCTGAGCCTTCAAAGCCATCGCTCAAAGTACGCATAAAGATCGTGAAGCGAAACGTTGATGGTACCTTGATCAATCCCAGTTCAGATGAAGCTAAGCCGATCAAGCCCTCTTCAGATGAGAATAAGTCGATCAAGCCGGAAACGTGTGTTGATAAAGTGGCACTTGATCGAGCAAAAATGATCAAGCCCCCACCCTGTGTTGGTGAACCTAAATCGATCAAGCCGAAGCCGTATTTGGATGAAGCGGCATTTGAGGCAAAGCTTCAGGCCACAAAGAGAAAGTTTCATGATCGATATGAAGAAATTGAGAACAGTAAGAGGCAGAGGAGGATACAAGTCTTGAGTTATCTTCCCAAGCAAGACTTCAAGATTGGATGCCGTCCTAGTACAAAATCACAAGGGAAGAAACTTGGAAACCATTTTCTGCAAGCCTCGCATAGGGTAAATGGGGTGGAGCTACGTGGGTGCAAGATCAAATACTCTGATTCTGATAAAGGGTTTGGCATTTTTGCGGCTAATGATGTTTCTGATGGGGTTCTATTAGTCGTGCCTCTGGATTTGGCAATAACTCCTATGAGAGTTTTGCAAGATCCTTTTTTTGGACCAGAATGTAGAGCAATGTTCGAAGAAGGAGATGTAGATGATAGGTTCTTGATGGTTTTGTTTCTAACAGTGGAGCGCCTCCGCAAGAGTTCTTCTTGGAAGCCGTACCTTGATATGCTTCCCACCACTTTTGGCAATCCGCTTTGGTTTACTGATGATGAGCTTTTGGAGCTAAAAGGAACAACATTGTACCGAGCAACTGAACTGCAGAAGAAAAGCTTGCGGTCTTTATATGATGATAAATTGAAGGCTCTGGTGGATAAACTTTTAACTCTTGATGGTGATTCGGAAAGGGATGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCTGTATTTTGGGCTCGTGCTTTGAACATTCCCCTTCCATACTCTTATGTATTTCCACAAGTTGAGGAAAAGAAGAATTGCAGTGCTACAAATGACAAAAGTTCTGACGATTCTACTAATATGATTAATGGCAATGGTAAAGAATGTCAGGTTGACGGGGTTGATGTTCAAGTTAATGGAGTGACATCTGTATCAAAACAAAAAGATACTGTCTGGGTGGAGGGTCTTGTTCCTGGCATTGATTTTTGCAACCATGGTTTAAAGCCGGCAGCAACTTGGGAAGTTGATGGAACAGGATCGATAACTCGAGTTCCTTTTTCTATGTATCTTCTTTCTGCTGGACAACCCTTGGAGACTGATGAAGAAATTTCTATAAGTTATGGTAACAAAGGAAATGAGGAATTACTTCATCTGTACGGTTTCGTCCTTGATGGTAATCCAGATGACTATCTCATGGTCCATTATCCGGTACAAGCCCTTCAAAGTGTTTCATTTTCCGACTCAAAAGCACAGCTTCTTGAAGCGCAGAAGGCCGAAATGAGGTGTCTCTTACCTAGAAGTTTACTCGATCATGGCTTTTTCCCAGTAGACATCTCAACTAATGAAGGAAGTGATGAGGGCCAACTCAACCATGTTTGCAGCTATAGTTGGAGTGGTCAGCGCAAGATGCCATCATATTTAAACAAGTTGGTTTTTCCCGAAAGCTTTTTGACAACTTTGAGGACCGTAGCCATGAAGGAGGATGAGCTGTTTCAGGTTTCATCATTGCTGGAAGAGCTTGTTACGTCTGGAGGGGGCAGGCAACCATCTGATTCAGAAGTTCGAGCAGCAATATGGGAGGCTTGTGGTGACTCCGGAGCTTTGCAAATGCTTGTTGATCTTCTTACTATGAGGATGGTGGATCTTCAAGATGATTCTGGTACAGAGGACAGTGACACTAATTTGCTTAAAAACGCACGCTTTAGTGGAAGCCCAAATCTGCATACAGGAAATGAAAACGATTTAAGTGAAGAGATAAATGGCCTTCAACCACCCCAATCGATGAGCAGAAACAAGTGGTCTAGTATAGTTTATAGACGAGGGCAGAAGCAACTAACTCGATTATTCCTCAAGGAAGCAGAGCATGCCTTGCAATTAGCTCTGGATGAAGGGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase SET

Protein Analysis

776

Amino Acids

86.7

Weight (kDa)

5.23

Isoelectric Point (pI)

39.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01920 AT1G01920 AT1G01920 AT1G01920 AT1G01920
fragaria_vesca	FvH4_7g12930 FvH4_7g12930 FvH4_7g12930 FvH4_7g12930 FvH4_7g12930 FvH4_7g12930 FvH4_7g12930
malus_domestica	MD02G1195100.v1.1
prunus_persica	Prupe.2G153600_v2.0.a1 Prupe.2G153600_v2.0.a1 Prupe.2G153600_v2.0.a1
pyrus_communis	pycom02g15890 pycom07g11920
rosa_chinensis	RchiOBHm_Chr1g0352061
rosa_laevigata	RLG00000028363
rosa_roxburghii	Rroxscaffold_1G00063100 Rroxscaffold_4G00303300 Rroxscaffold_4G00303330 Rroxscaffold_4G00326370 Rroxscaffold_5G00366830
rosa_rugosa	Rorug01G0223700 Rorug01G0223700
rosa_samantha	Rh1AG238300 Rh1BG208700 Rh1CG222700 Rh1DG235100
rosa_wichuraiana	Rw1G020700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	305
AccB1I	GGYRCC	1 cut(s)	305
AccI	GTMKAC	1 cut(s)	1761
AccIII	TCCGGA	2 cut(s)	121, 2027
AciI	CCGC	9 cut(s)	54, 108, 177, 180, 488, 755, 928, 986, 1069
AclI	AACGTT	1 cut(s)	297
AclWI	GGATC	5 cut(s)	4, 226, 827, 1477, 2082
AcsI	RAATTY	3 cut(s)	150, 1171, 1539
AcuI	CTGAAG	2 cut(s)	339, 491
AdeI	CACNNNGTG	1 cut(s)	440
AfaI	GTAC	9 cut(s)	214, 273, 307, 631, 953, 1037, 1589, 1644, 2095
AfiI	CCNNNNNNNGG	6 cut(s)	204, 443, 681, 842, 1639, 1713
AflIII	ACRYGT	1 cut(s)	386
AjnI	CCWGG	1 cut(s)	1405
AjuI	GAANNNNNNNTTGG	4 cut(s)	461, 493, 590, 622
Alw26I	GTCTC	2 cut(s)	1520, 1724
AlwI	GGATC	5 cut(s)	4, 226, 827, 1477, 2082
AlwNI	CAGNNNCTG	1 cut(s)	221
Ama87I	CYCGRG	1 cut(s)	1479
Aor13HI	TCCGGA	2 cut(s)	121, 2027
AoxI	GGCC	5 cut(s)	93, 510, 1704, 1792, 2194
ApeKI	GCWGC	4 cut(s)	56, 1442, 1812, 2000
ApoI	RAATTY	3 cut(s)	150, 1171, 1539
AseI	ATTAAT	1 cut(s)	1299
Asp700I	GAANNNNTTC	1 cut(s)	1578
Asp718I	GGTACC	1 cut(s)	305
AspLEI	GCGC	4 cut(s)	195, 924, 1699, 1836
AspS9I	GGNCC	5 cut(s)	93, 845, 1630, 1792, 1896
AsuC2I	CCSGG	1 cut(s)	92
AsuHPI	GGTGA	5 cut(s)	91, 194, 458, 1139, 2033
AsuII	TTCGAA	1 cut(s)	867
AvaI	CYCGRG	1 cut(s)	1479
AvaII	GGWCC	3 cut(s)	845, 1630, 1896
BaeI	ACNNNNGTAYC	2 cut(s)	1347, 1380
BanI	GGYRCC	1 cut(s)	305
BanII	GRGCYC	1 cut(s)	1189
BarI	GAAGNNNNNNTAC	2 cut(s)	1635, 1667
BauI	CACGAG	1 cut(s)	1188
BbvI	GCAGC	4 cut(s)	43, 1454, 1824, 2012
BceAI	ACGGC	3 cut(s)	457, 606, 934
BcgI	CGANNNNNNTGC	4 cut(s)	265, 299, 2252, 2286
BciT130I	CCWGG	1 cut(s)	1407
BciVI	GTATCC	1 cut(s)	567
BclI	TGATCA	2 cut(s)	312, 423
BcnI	CCSGG	1 cut(s)	92
BcoDI	GTCTC	2 cut(s)	1520, 1724
BfaI	CTAG	5 cut(s)	86, 203, 627, 1728, 2235
BfmI	CTRYAG	2 cut(s)	1052, 1816
BfoI	RGCGCY	2 cut(s)	196, 925
BfuI	GTATCC	1 cut(s)	567
BisI	GCNGC	9 cut(s)	54, 57, 108, 178, 489, 756, 1443, 1813, 2001
BlpI	GCTNAGC	2 cut(s)	246, 336
BlsI	GCNGC	9 cut(s)	55, 58, 109, 179, 490, 757, 1444, 1814, 2002
Bme1390I	CCNGG	2 cut(s)	92, 1407
Bme18I	GGWCC	3 cut(s)	845, 1630, 1896
BmeT110I	CYCGRG	1 cut(s)	1479
BmgT120I	GGNCC	5 cut(s)	93, 845, 1630, 1792, 1896
BmiI	GGNNCC	1 cut(s)	307
BmrFI	CCNGG	2 cut(s)	92, 1407
BmrI	ACTGGG	3 cut(s)	237, 315, 1751
BmsI	GCATC	2 cut(s)	608, 1830
BmuI	ACTGGG	3 cut(s)	237, 315, 1751
BpmI	CTGGAG	2 cut(s)	58, 1983
Bpu1102I	GCTNAGC	2 cut(s)	246, 336
Bpu14I	TTCGAA	1 cut(s)	867
BpuEI	CTTGAG	2 cut(s)	604, 2267
BpuMI	CCSGG	1 cut(s)	92
Bsa29I	ATCGAT	4 cut(s)	458, 535, 1472, 2213
BsaAI	YACGTR	1 cut(s)	704
BsaBI	GATNNNNATC	2 cut(s)	1608, 1620
BsaJI	CCNNGG	2 cut(s)	1426, 1521
BsaWI	WCCGGW	3 cut(s)	121, 1639, 2027
Bsc4I	CCNNNNNNNGG	6 cut(s)	204, 443, 681, 842, 1639, 1713
Bse118I	RCCGGY	1 cut(s)	1438
Bse1I	ACTGG	4 cut(s)	41, 232, 321, 1757
Bse3DI	GCAATG	3 cut(s)	867, 1312, 1937
Bse8I	GATNNNNATC	2 cut(s)	1608, 1620
BseAI	TCCGGA	2 cut(s)	121, 2027
BseBI	CCWGG	1 cut(s)	1407
BseCI	ATCGAT	4 cut(s)	458, 535, 1472, 2213
BseDI	CCNNGG	2 cut(s)	1426, 1521
BseGI	GGATG	6 cut(s)	487, 623, 1147, 1921, 2073, 2323
BseJI	GATNNNNATC	2 cut(s)	1608, 1620
BseLI	CCNNNNNNNGG	6 cut(s)	204, 443, 681, 842, 1639, 1713
BseMI	GCAATG	3 cut(s)	867, 1312, 1937
BseMII	CTCAG	1 cut(s)	237
BseNI	ACTGG	4 cut(s)	41, 232, 321, 1757
BseRI	GAGGAG	2 cut(s)	140, 583
BseXI	GCAGC	4 cut(s)	43, 1454, 1824, 2012
BshFI	GGCC	5 cut(s)	95, 512, 1706, 1794, 2196
BshNI	GGYRCC	1 cut(s)	305
BshVI	ATCGAT	4 cut(s)	458, 535, 1472, 2213
BsiHKCI	CYCGRG	1 cut(s)	1479
BsiSI	CCGG	6 cut(s)	91, 122, 380, 1439, 1640, 2028
BslFI	GGGAC	2 cut(s)	10, 19
BslI	CCNNNNNNNGG	6 cut(s)	204, 443, 681, 842, 1639, 1713
BsmAI	GTCTC	2 cut(s)	1520, 1724
BsmFI	GGGAC	2 cut(s)	10, 19
BsnI	GGCC	5 cut(s)	95, 512, 1706, 1794, 2196
BsoBI	CYCGRG	1 cut(s)	1479
Bsp119I	TTCGAA	1 cut(s)	867
Bsp1286I	GDGCHC	1 cut(s)	1189
Bsp13I	TCCGGA	2 cut(s)	121, 2027
Bsp1720I	GCTNAGC	2 cut(s)	246, 336
Bsp19I	CCATGG	1 cut(s)	1426
BspACI	CCGC	9 cut(s)	54, 108, 177, 180, 488, 755, 928, 986, 1069
BspANI	GGCC	5 cut(s)	95, 512, 1706, 1794, 2196
BspCNI	CTCAG	1 cut(s)	238
BspDI	ATCGAT	4 cut(s)	458, 535, 1472, 2213
BspEI	TCCGGA	2 cut(s)	121, 2027
BspHI	TCATGA	1 cut(s)	529
BspLI	GGNNCC	1 cut(s)	307
BspMAI	CTGCAG	1 cut(s)	1056
BspPI	GGATC	5 cut(s)	4, 226, 827, 1477, 2082
BspQI	GCTCTTC	1 cut(s)	1941
BspT104I	TTCGAA	1 cut(s)	867
BspT107I	GGYRCC	1 cut(s)	305
BsrDI	GCAATG	3 cut(s)	867, 1312, 1937
BsrFI	RCCGGY	1 cut(s)	1438
BsrI	ACTGG	4 cut(s)	41, 232, 321, 1757
BssAI	RCCGGY	1 cut(s)	1438
BssECI	CCNNGG	2 cut(s)	1426, 1521
BssSI	CACGAG	1 cut(s)	1188
BssT1I	CCWWGG	2 cut(s)	1426, 1521
Bst2BI	CACGAG	1 cut(s)	1188
Bst2UI	CCWGG	1 cut(s)	1407
Bst4CI	ACNGT	6 cut(s)	557, 916, 1384, 1592, 1900, 2105
Bst6I	CTCTTC	3 cut(s)	358, 1941, 2178
BstAPI	GCANNNNNTGC	2 cut(s)	2297, 2302
BstBAI	YACGTR	1 cut(s)	704
BstBI	TTCGAA	1 cut(s)	867
BstC8I	GCNNGC	6 cut(s)	672, 1067, 1440, 1973, 2131, 2298
BstDEI	CTNAG	2 cut(s)	246, 336
BstDSI	CCRYGG	1 cut(s)	1426
BstENI	CCTNNNNNAGG	1 cut(s)	679
BstF5I	GGATG	6 cut(s)	487, 623, 1147, 1921, 2073, 2323
BstH2I	RGCGCY	2 cut(s)	196, 925
BstHHI	GCGC	4 cut(s)	195, 924, 1699, 1836
BstMAI	GTCTC	2 cut(s)	1520, 1724
BstNI	CCWGG	1 cut(s)	1407
BstNSI	RCATGY	1 cut(s)	2300
BstSCI	CCNGG	2 cut(s)	90, 1405
BstSFI	CTRYAG	2 cut(s)	1052, 1816
BstV1I	GCAGC	4 cut(s)	43, 1454, 1824, 2012
BstX2I	RGATCY	3 cut(s)	218, 832, 2074
BstYI	RGATCY	3 cut(s)	218, 832, 2074
Bsu15I	ATCGAT	4 cut(s)	458, 535, 1472, 2213
BsuI	GTATCC	1 cut(s)	567
BsuRI	GGCC	5 cut(s)	95, 512, 1706, 1794, 2196
BsuTUI	ATCGAT	4 cut(s)	458, 535, 1472, 2213
BtgI	CCRYGG	1 cut(s)	1426
BtgZI	GCGATG	1 cut(s)	246
BtsCI	GGATG	6 cut(s)	487, 623, 1147, 1921, 2073, 2323
BtsI	GCAGTG	1 cut(s)	1261
BtsIMutI	CAGTG	3 cut(s)	921, 1261, 2110
Cac8I	GCNNGC	6 cut(s)	672, 1067, 1440, 1973, 2131, 2298
CaiI	CAGNNNCTG	1 cut(s)	221
CciI	TCATGA	1 cut(s)	529
CfoI	GCGC	4 cut(s)	195, 924, 1699, 1836
Cfr10I	RCCGGY	1 cut(s)	1438
Cfr13I	GGNCC	5 cut(s)	93, 845, 1630, 1792, 1896
ClaI	ATCGAT	4 cut(s)	458, 535, 1472, 2213
Csp6I	GTAC	9 cut(s)	213, 272, 306, 630, 952, 1036, 1588, 1643, 2094
CspCI	CAANNNNNGTGG	4 cut(s)	58, 93, 958, 993
CviAII	CATG	7 cut(s)	530, 1427, 1627, 1745, 1805, 1906, 2297
CviQI	GTAC	9 cut(s)	213, 272, 306, 630, 952, 1036, 1588, 1643, 2094
DdeI	CTNAG	2 cut(s)	246, 336
DraI	TTTAAA	2 cut(s)	1434, 1854
DraIII	CACNNNGTG	1 cut(s)	440
Eam1104I	CTCTTC	3 cut(s)	358, 1941, 2178
EarI	CTCTTC	3 cut(s)	358, 1941, 2178
Eco130I	CCWWGG	2 cut(s)	1426, 1521
Eco24I	GRGCYC	1 cut(s)	1189
Eco47I	GGWCC	3 cut(s)	845, 1630, 1896
Eco57I	CTGAAG	2 cut(s)	339, 491
Eco88I	CYCGRG	1 cut(s)	1479
EcoNI	CCTNNNNNAGG	1 cut(s)	679
EcoRI	GAATTC	1 cut(s)	150
EcoRII	CCWGG	1 cut(s)	1405
EcoT14I	CCWWGG	2 cut(s)	1426, 1521
EcoT38I	GRGCYC	1 cut(s)	1189
ErhI	CCWWGG	2 cut(s)	1426, 1521
FaeI	CATG	7 cut(s)	533, 1430, 1630, 1748, 1808, 1909, 2300
FaqI	GGGAC	2 cut(s)	10, 19
FatI	CATG	7 cut(s)	529, 1426, 1626, 1744, 1804, 1905, 2296
FbaI	TGATCA	2 cut(s)	312, 423
FblI	GTMKAC	1 cut(s)	1761
Fnu4HI	GCNGC	9 cut(s)	54, 57, 108, 178, 489, 756, 1443, 1813, 2001
FokI	GGATG	5 cut(s)	494, 630, 1154, 1928, 2080
FriOI	GRGCYC	1 cut(s)	1189
Fsp4HI	GCNGC	9 cut(s)	54, 57, 108, 178, 489, 756, 1443, 1813, 2001
FspBI	CTAG	5 cut(s)	86, 203, 627, 1728, 2235
GlaI	GCGC	4 cut(s)	194, 923, 1698, 1835
GluI	GCNGC	9 cut(s)	54, 57, 108, 178, 489, 756, 1443, 1813, 2001
GsuI	CTGGAG	2 cut(s)	58, 1983
HaeII	RGCGCY	2 cut(s)	196, 925
HaeIII	GGCC	5 cut(s)	95, 512, 1706, 1794, 2196
HapII	CCGG	6 cut(s)	91, 122, 380, 1439, 1640, 2028
HhaI	GCGC	4 cut(s)	195, 924, 1699, 1836
Hin1II	CATG	7 cut(s)	533, 1430, 1630, 1748, 1808, 1909, 2300
Hin6I	GCGC	4 cut(s)	193, 922, 1697, 1834
HinP1I	GCGC	4 cut(s)	193, 922, 1697, 1834
HincII	GTYRAC	1 cut(s)	1327
HindII	GTYRAC	1 cut(s)	1327
HindIII	AAGCTT	3 cut(s)	503, 1063, 1876
HpaII	CCGG	6 cut(s)	91, 122, 380, 1439, 1640, 2028
HphI	GGTGA	5 cut(s)	91, 194, 458, 1139, 2033
Hpy166II	GTNNAC	5 cut(s)	449, 996, 1327, 1736, 1762
Hpy8I	GTNNAC	5 cut(s)	449, 996, 1327, 1736, 1762
HpyCH4III	ACNGT	6 cut(s)	557, 916, 1384, 1592, 1900, 2105
HpyCH4IV	ACGT	4 cut(s)	297, 386, 703, 1958
HpyF3I	CTNAG	2 cut(s)	246, 336
HpySE526I	ACGT	4 cut(s)	297, 386, 703, 1958
Hsp92II	CATG	7 cut(s)	533, 1430, 1630, 1748, 1808, 1909, 2300
HspAI	GCGC	4 cut(s)	193, 922, 1697, 1834
Kpn2I	TCCGGA	2 cut(s)	121, 2027
KpnI	GGTACC	1 cut(s)	309
KroI	GCCGGC	1 cut(s)	1438
KroNI	GCCGGC	1 cut(s)	1440
Ksp22I	TGATCA	2 cut(s)	312, 423
LguI	GCTCTTC	1 cut(s)	1941
LmnI	GCTCC	5 cut(s)	200, 697, 919, 1015, 2030
Lsp1109I	GCAGC	4 cut(s)	43, 1454, 1824, 2012
LweI	GCATC	2 cut(s)	608, 1830
MaeI	CTAG	5 cut(s)	86, 203, 627, 1728, 2235
MaeII	ACGT	4 cut(s)	297, 386, 703, 1958
MaeIII	GTNAC	5 cut(s)	1354, 1556, 1954, 2021, 2105
MflI	RGATCY	3 cut(s)	218, 832, 2074
MhlI	GDGCHC	1 cut(s)	1189
MlyI	GAGTC	4 cut(s)	32, 154, 1667, 2018
MmeI	TCCRAC	3 cut(s)	213, 1695, 1802
MroI	TCCGGA	2 cut(s)	121, 2027
MroNI	GCCGGC	1 cut(s)	1438
MroXI	GAANNNNTTC	1 cut(s)	1578
MseI	TTAA	7 cut(s)	1115, 1299, 1347, 1433, 1853, 2121, 2177
MspA1I	CMGCKG	1 cut(s)	56
MspI	CCGG	6 cut(s)	91, 122, 380, 1439, 1640, 2028
MspR9I	CCNGG	2 cut(s)	92, 1407
MvaI	CCWGG	1 cut(s)	1407
NaeI	GCCGGC	1 cut(s)	1440
NciI	CCSGG	1 cut(s)	92
NcoI	CCATGG	1 cut(s)	1426
NgoMIV	GCCGGC	1 cut(s)	1438
NlaIII	CATG	7 cut(s)	533, 1430, 1630, 1748, 1808, 1909, 2300
NlaIV	GGNNCC	1 cut(s)	307
NmuCI	GTSAC	3 cut(s)	1354, 2021, 2105
NspI	RCATGY	1 cut(s)	2300
NspV	TTCGAA	1 cut(s)	867
PaeI	GCATGC	1 cut(s)	2300
PaeR7I	CTCGAG	1 cut(s)	1479
PagI	TCATGA	1 cut(s)	529
PciSI	GCTCTTC	1 cut(s)	1941
PcsI	WCGNNNNNNNCGW	2 cut(s)	111, 464
PdiI	GCCGGC	1 cut(s)	1440
PdmI	GAANNNNTTC	1 cut(s)	1578
PfeI	GAWTC	6 cut(s)	163, 728, 1130, 1283, 1985, 2087
PkrI	GCNGC	9 cut(s)	55, 58, 109, 179, 490, 757, 1444, 1814, 2002
PleI	GAGTC	4 cut(s)	31, 153, 1667, 2018
PpsI	GAGTC	4 cut(s)	31, 153, 1667, 2018
Ppu21I	YACGTR	1 cut(s)	704
PshBI	ATTAAT	1 cut(s)	1299
Psp1406I	AACGTT	1 cut(s)	297
Psp6I	CCWGG	1 cut(s)	1405
PspGI	CCWGG	1 cut(s)	1405
PspN4I	GGNNCC	1 cut(s)	307
PspPI	GGNCC	5 cut(s)	93, 845, 1630, 1792, 1896
PspXI	VCTCGAGB	1 cut(s)	1479
PstI	CTGCAG	1 cut(s)	1056
PstNI	CAGNNNCTG	1 cut(s)	221
PsuI	RGATCY	3 cut(s)	218, 832, 2074
RsaI	GTAC	9 cut(s)	214, 273, 307, 631, 953, 1037, 1589, 1644, 2095
RsaNI	GTAC	9 cut(s)	213, 272, 306, 630, 952, 1036, 1588, 1643, 2094
SapI	GCTCTTC	1 cut(s)	1941
SaqAI	TTAA	7 cut(s)	1115, 1299, 1347, 1433, 1853, 2121, 2177
SatI	GCNGC	9 cut(s)	54, 57, 108, 178, 489, 756, 1443, 1813, 2001
Sau96I	GGNCC	5 cut(s)	93, 845, 1630, 1792, 1896
SchI	GAGTC	4 cut(s)	32, 154, 1667, 2018
ScrFI	CCNGG	2 cut(s)	92, 1407
SduI	GDGCHC	1 cut(s)	1189
SfaNI	GCATC	2 cut(s)	608, 1830
SfcI	CTRYAG	2 cut(s)	1052, 1816
Sfr274I	CTCGAG	1 cut(s)	1479
SfuI	TTCGAA	1 cut(s)	867
SinI	GGWCC	3 cut(s)	845, 1630, 1896
SlaI	CTCGAG	1 cut(s)	1479
SmlI	CTYRAG	3 cut(s)	583, 1479, 2282
SmoI	CTYRAG	3 cut(s)	583, 1479, 2282
SphI	GCATGC	1 cut(s)	2300
SsiI	CCGC	9 cut(s)	54, 108, 177, 180, 488, 755, 928, 986, 1069
SspMI	CTAG	5 cut(s)	86, 203, 627, 1728, 2235
StyD4I	CCNGG	2 cut(s)	90, 1405
StyI	CCWWGG	2 cut(s)	1426, 1521
TaaI	ACNGT	6 cut(s)	557, 916, 1384, 1592, 1900, 2105
TaiI	ACGT	4 cut(s)	300, 389, 706, 1961
TatI	WGTACW	1 cut(s)	629
TauI	GCSGC	5 cut(s)	56, 110, 180, 491, 758
TfiI	GAWTC	6 cut(s)	163, 728, 1130, 1283, 1985, 2087
Tru1I	TTAA	7 cut(s)	1115, 1299, 1347, 1433, 1853, 2121, 2177
Tru9I	TTAA	7 cut(s)	1115, 1299, 1347, 1433, 1853, 2121, 2177
TscAI	CASTG	3 cut(s)	921, 1261, 2110
TseFI	GTSAC	3 cut(s)	1354, 2021, 2105
TseI	GCWGC	4 cut(s)	56, 1442, 1812, 2000
Tsp45I	GTSAC	3 cut(s)	1354, 2021, 2105
TspRI	CASTG	3 cut(s)	921, 1261, 2110
VpaK11BI	GGWCC	3 cut(s)	845, 1630, 1896
VspI	ATTAAT	1 cut(s)	1299
XagI	CCTNNNNNAGG	1 cut(s)	679
XapI	RAATTY	3 cut(s)	150, 1171, 1539
XbaI	TCTAGA	1 cut(s)	85
XceI	RCATGY	1 cut(s)	2300
XhoI	CTCGAG	1 cut(s)	1479
XmiI	GTMKAC	1 cut(s)	1761
XmnI	GAANNNNTTC	1 cut(s)	1578
XspI	CTAG	5 cut(s)	86, 203, 627, 1728, 2235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.