Rroxscaffold_4G00311700

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
34223628 .. 34224559
932 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00311700.1

Sequence Viewer

Length: 264 bp
ATGGAAAGAGAAGGTCTTACTGACTTCAGGAATGGTCTCGAAGATCCTGAAAACCGGCTGTCTTCATTGGAAGGAAGCAACTGCTGGTGGTGGTGGGGGATAAGCTGTGATAATACAACTGGAGTTGTTATTGCAGCTGATCTCCATAACCCACATCCACTTCTTCCATTTGAAGATTCTGCTTCCTCTGGCAGGTTCCATACTTTGCAATCTGAATTGAACTGGTTTCGCCTATCCGGTACCTTACAGGAAAAGTTCCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006898 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009595 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0010359 GO:0012505 GO:0014070 GO:0016020 GO:0016043 GO:0016045 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0022898 GO:0023052 GO:0031410 GO:0031982 GO:0032409 GO:0032412 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0033036 GO:0033037 GO:0033554 GO:0033993 GO:0034762 GO:0034765 GO:0036211 GO:0038023 GO:0042221 GO:0042545 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043269 GO:0043401 GO:0043412 GO:0044070 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051179 GO:0051234 GO:0051606 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0060089 GO:0065007 GO:0065009 GO:0070727 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0071944 GO:0097708 GO:0098542 GO:0098543 GO:0098581 GO:0098657 GO:0140096 GO:1901564 GO:1901700 GO:1901701 GO:1903959
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

87

Amino Acids

10.01

Weight (kDa)

4.81

Isoelectric Point (pI)

45.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 183
Acc65I GGTACC 1 cut(s) 239
AccB1I GGYRCC 1 cut(s) 239
AciI CCGC 1 cut(s) 259
AclWI GGATC 1 cut(s) 38
AcuI CTGAAG 1 cut(s) 10
AfaI GTAC 1 cut(s) 241
AfiI CCNNNNNNNGG 1 cut(s) 192
AgsI TTSAA 2 cut(s) 173, 220
AluBI AGCT 2 cut(s) 105, 137
AluI AGCT 2 cut(s) 105, 137
Alw26I GTCTC 1 cut(s) 41
AlwI GGATC 1 cut(s) 38
ApeKI GCWGC 1 cut(s) 134
Asp718I GGTACC 1 cut(s) 239
BanI GGYRCC 1 cut(s) 239
BbsI GAAGAC 1 cut(s) 54
BbvI GCAGC 1 cut(s) 146
BcoDI GTCTC 1 cut(s) 41
BfuAI ACCTGC 1 cut(s) 183
BisI GCNGC 1 cut(s) 135
BlsI GCNGC 1 cut(s) 136
BmiI GGNNCC 2 cut(s) 197, 241
BpiI GAAGAC 1 cut(s) 54
BpmI CTGGAG 1 cut(s) 141
BsaI GGTCTC 1 cut(s) 41
BsaWI WCCGGW 1 cut(s) 236
Bsc4I CCNNNNNNNGG 1 cut(s) 192
Bse118I RCCGGY 1 cut(s) 54
Bse1I ACTGG 2 cut(s) 124, 227
BseGI GGATG 1 cut(s) 154
BseLI CCNNNNNNNGG 1 cut(s) 192
BseNI ACTGG 2 cut(s) 124, 227
BseXI GCAGC 1 cut(s) 146
BshNI GGYRCC 1 cut(s) 239
BsiSI CCGG 2 cut(s) 55, 237
BslI CCNNNNNNNGG 1 cut(s) 192
BsmAI GTCTC 1 cut(s) 41
Bso31I GGTCTC 1 cut(s) 41
Bsp143I GATC 2 cut(s) 43, 139
BspACI CCGC 1 cut(s) 259
BspLI GGNNCC 2 cut(s) 197, 241
BspMI ACCTGC 1 cut(s) 183
BspPI GGATC 1 cut(s) 38
BspT107I GGYRCC 1 cut(s) 239
BspTNI GGTCTC 1 cut(s) 41
BsrFI RCCGGY 1 cut(s) 54
BsrI ACTGG 2 cut(s) 124, 227
BssAI RCCGGY 1 cut(s) 54
BssMI GATC 2 cut(s) 43, 139
BstENI CCTNNNNNAGG 1 cut(s) 190
BstF5I GGATG 1 cut(s) 154
BstKTI GATC 2 cut(s) 46, 142
BstMAI GTCTC 1 cut(s) 41
BstMBI GATC 2 cut(s) 43, 139
BstV1I GCAGC 1 cut(s) 146
BstV2I GAAGAC 1 cut(s) 54
BstX2I RGATCY 1 cut(s) 43
BstYI RGATCY 1 cut(s) 43
BtsCI GGATG 1 cut(s) 154
BveI ACCTGC 1 cut(s) 183
Cfr10I RCCGGY 1 cut(s) 54
Csp6I GTAC 1 cut(s) 240
CviJI RGCY 3 cut(s) 58, 105, 137
CviKI_1 RGCY 3 cut(s) 58, 105, 137
CviQI GTAC 1 cut(s) 240
DpnI GATC 2 cut(s) 45, 141
DpnII GATC 2 cut(s) 43, 139
Eco31I GGTCTC 1 cut(s) 41
Eco57I CTGAAG 1 cut(s) 10
EcoNI CCTNNNNNAGG 1 cut(s) 190
FaiI YATR 2 cut(s) 147, 201
Fnu4HI GCNGC 1 cut(s) 135
FokI GGATG 1 cut(s) 141
Fsp4HI GCNGC 1 cut(s) 135
GluI GCNGC 1 cut(s) 135
GsuI CTGGAG 1 cut(s) 141
HapII CCGG 2 cut(s) 55, 237
HinfI GANTC 1 cut(s) 176
HpaII CCGG 2 cut(s) 55, 237
Hpy188I TCNGA 1 cut(s) 214
Hpy188III TCNNGA 3 cut(s) 28, 38, 47
HpyAV CCTTC 2 cut(s) 5, 65
HpyCH4V TGCA 2 cut(s) 134, 208
KpnI GGTACC 1 cut(s) 243
Kzo9I GATC 2 cut(s) 43, 139
Lsp1109I GCAGC 1 cut(s) 146
MalI GATC 2 cut(s) 45, 141
MboI GATC 2 cut(s) 43, 139
MboII GAAGA 4 cut(s) 53, 54, 155, 185
MflI RGATCY 1 cut(s) 43
MluCI AATT 1 cut(s) 215
MnlI CCTC 1 cut(s) 196
MspA1I CMGCKG 2 cut(s) 137, 261
MspI CCGG 2 cut(s) 55, 237
NdeII GATC 2 cut(s) 43, 139
NlaIV GGNNCC 2 cut(s) 197, 241
PfeI GAWTC 1 cut(s) 176
PkrI GCNGC 1 cut(s) 136
PspN4I GGNNCC 2 cut(s) 197, 241
PsuI RGATCY 1 cut(s) 43
PvuII CAGCTG 1 cut(s) 137
RsaI GTAC 1 cut(s) 241
RsaNI GTAC 1 cut(s) 240
SatI GCNGC 1 cut(s) 135
Sau3AI GATC 2 cut(s) 43, 139
SetI ASST 5 cut(s) 16, 107, 139, 197, 245
Sse9I AATT 1 cut(s) 215
SsiI CCGC 1 cut(s) 259
TaqI TCGA 1 cut(s) 39
TasI AATT 1 cut(s) 215
TfiI GAWTC 1 cut(s) 176
TseI GCWGC 1 cut(s) 134
TspDTI ATGAA 1 cut(s) 54
XagI CCTNNNNNAGG 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.