Rroxscaffold_4G00327480

GTP-BINDING protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0005373
Physical Location & Seq
Reverse (-)
60213555 .. 60227412
13858 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00327480.1

Sequence Viewer

Length: 1701 bp
ATGGTTCAATCTTCTCCCACTTCAGTTCTTGGTCACAAGAGACAGCTTCAAGGACCTGAGTCTTTTCCATACCAGCCTGTGTCTAATCAATTTGTGTCTCAGACTATACATTTCTCTGGGAAAAAATTGAAAATTATAATGCCAAATACTCGTCCAAGAAAACTTCTTTATGAAGTATTGCTTGACAAATTCTGTAAGGCCAATAGCAGCTATGTTCAAAAGATTGGGGCTTTTTCAATCGAATTGGTTGCTAAGCAATTTTGGTTGCATATGGTTTTGTGCAATTTGGATGTTGATCGTAGTGTTCACGAAGATATCTACCGGGGTAGGGGCACAGCAGATGTTGCCAAAAATGAGTTGAATGGACTTTGGAAGCTGTTAAATGATCAAGTGGATGCTGTTTTTGTGAATACAACTCTGTCTGGAATTCAGCAGAGGAACTTGGAGGCAATGTTGGGCAAACCAGTCTTGGACCGTGTGGGTCTTATAATAGAGATTTTCAATGCTCATGCTTGCACAAAGGAGGGAAAGCTTCAGGCCCAGTTAGCAGCACTAATGTATAAGAAAACAAGACTTATACGAACGCGTGGTCCAAGTGGACGCTTAGGTTTTGGAATGGGTGGAGAAGCCGAAGTTGTTAGCGCCCGAGGGAGAGGAAATGCTGGAGCTGGATTCATTAGTGGGGCAGGAGAAACTGAACTTCAACTTCAACGACGAAGAATTTTAGAAAGGAGGAGTAGTCTGCTACAACAAATTAAGGATGTTCGTCGAACTCGAGCTGTGCAACGTGCTTCTCGCAAGAGGCATGGAAGCTCTGGTCGAGGCTTAGCTACTGTTGCTGTTGTGGGGTATACAAATGCTGGGAAATCTACATTGGTGAGTGCCCTCTCACATAGTGATCTCTACAGTGATTCTCGATTGTTTGCAACAGTTGACCCTAGATTGAGAAGTGTACTTCTTCCTTCAGGGAGGAAAGTGCTTGTTAGCGATACGGTAGGATTTATTTCAGATTTGCCTGTGCAGTTAGTGGAAGCTTTTCATGCGACTTTAGAAGAAGTTGTGGAGGCTGATCTGCTTGTGCATGTGTTGGATTGCACTGCTCCTAATCTTGAGGAGCACCGATCAACGGTGTTACATGTTCTTGAGCAAATCGGCGTATCCAAAGAGAAGCTTGAGAATATGATTGAAGTTTGGAATAAGATTGACAGTGAGGGAGAGGATATGGGAATGGATGTTAATGAATCTCTTGATGATGGTGAAGATGGTGAGGTGAGCAGCCTCTCAGGAGAAGATGATGATGTGGAGTCTGAGCTGTCAACAGGAGCAGCAAACTGTAGGGCTGATGATCCTTTGTCTGAGCTGTCAGCAGAGAATCCCGAAGCCATGGATGACCAAGAACTCGATTCAGAAGATAACCAAGATCATTGGGGTGAAGAAGGTGGTTTCAGCATGGGCCCGAAGACTCTGAATGACCAACAAAGTGAGTACCCTAAGGAGTGGGCAGTGGAAAAACAATTGCAATCACGAGCTCCATCTGGTCCACATGTTAGAACTTCTGCCATAACAGGAGTCGGCTTGCAAGAGTTGTTAGAGCTCATTGATGAGAAACTGAAAGTCCCAAATGTTCTGGAAAAGGGTGTATTTGATCGAAAATGGAGGCCCTCTCGTACAGAGGAGGCGGGTCTAGCAGTGGGACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0043021 GO:0043022 GO:0044424 GO:0044464 GO:0044877
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GTP-bdg_M GTP-bdg_N MMR_HSR1

Protein Analysis

566

Amino Acids

62.39

Weight (kDa)

5.49

Isoelectric Point (pI)

43.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP-bdg_N PF13167 102 - 167 5.6e-09 GTP-binding GTPase N-terminal
GTP-bdg_M PF16360 170 - 266 6.3e-13 GTP-binding GTPase Middle Region
MMR_HSR1 PF01926 278 - 400 1e-15 50S ribosome-binding GTPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 137, 488
AccI GTMKAC 1 cut(s) 851
AccII CGCG 1 cut(s) 586
AciI CCGC 1 cut(s) 1679
AclWI GGATC 1 cut(s) 1340
AcsI RAATTY 3 cut(s) 188, 426, 720
AcuI CTGAAG 3 cut(s) 6, 518, 948
AdeI CACNNNGTG 1 cut(s) 896
AfaI GTAC 3 cut(s) 954, 1487, 1669
AfiI CCNNNNNNNGG 2 cut(s) 328, 1126
AflIII ACRYGT 3 cut(s) 584, 1135, 1543
AjuI GAANNNNNNNTTGG 2 cut(s) 857, 889
AloI GAACNNNNNNTCC 2 cut(s) 574, 606
Alw21I GWGCWC 3 cut(s) 1119, 1531, 1596
Alw26I GTCTC 2 cut(s) 34, 102
AlwI GGATC 1 cut(s) 1340
Ama87I CYCGRG 2 cut(s) 645, 774
AoxI GGCC 4 cut(s) 198, 537, 1453, 1658
ApaI GGGCCC 1 cut(s) 1457
ApeKI GCWGC 4 cut(s) 207, 548, 1275, 1325
ApoI RAATTY 3 cut(s) 188, 426, 720
ArsI GACNNNNNNTTYG 2 cut(s) 574, 606
Asp700I GAANNNNTTC 1 cut(s) 1035
AspLEI GCGC 1 cut(s) 644
AspS9I GGNCC 8 cut(s) 53, 472, 538, 590, 1453, 1454, 1538, 1659
AsuC2I CCSGG 1 cut(s) 323
AsuHPI GGTGA 5 cut(s) 889, 1268, 1277, 1282, 1442
AvaI CYCGRG 2 cut(s) 645, 774
AvaII GGWCC 4 cut(s) 53, 472, 590, 1538
AxyI CCTNAGG 1 cut(s) 1491
BaeGI GKGCMC 3 cut(s) 335, 886, 1457
BanII GRGCYC 3 cut(s) 1457, 1531, 1596
BauI CACGAG 1 cut(s) 1524
BbsI GAAGAC 1 cut(s) 1466
Bbv12I GWGCWC 3 cut(s) 1119, 1531, 1596
BbvI GCAGC 4 cut(s) 219, 560, 1287, 1337
BccI CCATC 3 cut(s) 1247, 1256, 1540
BcgI CGANNNNNNTGC 2 cut(s) 230, 264
BciVI GTATCC 1 cut(s) 1168
BclI TGATCA 1 cut(s) 385
BcnI CCSGG 1 cut(s) 323
BcoDI GTCTC 2 cut(s) 34, 102
BfaI CTAG 2 cut(s) 939, 1685
BfmI CTRYAG 2 cut(s) 904, 1333
BfoI RGCGCY 1 cut(s) 645
BfuI GTATCC 1 cut(s) 1168
BisI GCNGC 4 cut(s) 208, 549, 1276, 1326
BlpI GCTNAGC 2 cut(s) 252, 826
BlsI GCNGC 4 cut(s) 209, 550, 1277, 1327
Bme1390I CCNGG 1 cut(s) 323
Bme18I GGWCC 4 cut(s) 53, 472, 590, 1538
BmeT110I CYCGRG 2 cut(s) 645, 774
BmgT120I GGNCC 8 cut(s) 53, 472, 538, 590, 1453, 1454, 1538, 1659
BmiI GGNNCC 1 cut(s) 1455
BmrFI CCNGG 1 cut(s) 323
BmrI ACTGGG 1 cut(s) 535
BmsI GCATC 1 cut(s) 385
BmuI ACTGGG 1 cut(s) 535
BoxI GACNNNNGTC 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 1466
BplI GAGNNNNNCTC 2 cut(s) 1648, 1680
BpmI CTGGAG 1 cut(s) 684
Bpu10I CCTNAGC 1 cut(s) 604
Bpu1102I GCTNAGC 2 cut(s) 252, 826
BpuEI CTTGAG 3 cut(s) 1130, 1163, 1193
BpuMI CCSGG 1 cut(s) 323
BsaBI GATNNNNATC 1 cut(s) 294
BsaJI CCNNGG 3 cut(s) 322, 646, 1383
BsaXI ACNNNNNCTCC 4 cut(s) 437, 467, 724, 754
Bsc4I CCNNNNNNNGG 2 cut(s) 328, 1126
Bse1I ACTGG 2 cut(s) 464, 541
Bse21I CCTNAGG 1 cut(s) 1491
Bse3DI GCAATG 1 cut(s) 456
Bse8I GATNNNNATC 1 cut(s) 294
BseDI CCNNGG 3 cut(s) 322, 646, 1383
BseGI GGATG 5 cut(s) 295, 400, 766, 1237, 1393
BseJI GATNNNNATC 1 cut(s) 294
BseLI CCNNNNNNNGG 2 cut(s) 328, 1126
BseMI GCAATG 1 cut(s) 456
BseMII CTCAG 5 cut(s) 48, 113, 1296, 1299, 1347
BseNI ACTGG 2 cut(s) 464, 541
BseRI GAGGAG 3 cut(s) 748, 1127, 1688
BseSI GKGCMC 3 cut(s) 335, 886, 1457
BseXI GCAGC 4 cut(s) 219, 560, 1287, 1337
BseYI CCCAGC 1 cut(s) 860
BsgI GTGCAG 1 cut(s) 1040
Bsh1236I CGCG 1 cut(s) 586
BshFI GGCC 4 cut(s) 200, 539, 1455, 1660
BsiHKAI GWGCWC 3 cut(s) 1119, 1531, 1596
BsiHKCI CYCGRG 2 cut(s) 645, 774
BsiSI CCGG 1 cut(s) 322
BslFI GGGAC 1 cut(s) 1601
BslI CCNNNNNNNGG 2 cut(s) 328, 1126
BsmAI GTCTC 2 cut(s) 34, 102
BsmFI GGGAC 1 cut(s) 1601
BsnI GGCC 4 cut(s) 200, 539, 1455, 1660
BsoBI CYCGRG 2 cut(s) 645, 774
Bsp120I GGGCCC 1 cut(s) 1453
Bsp1286I GDGCHC 6 cut(s) 335, 886, 1119, 1457, 1531, 1596
Bsp143I GATC 8 cut(s) 295, 385, 898, 1069, 1121, 1345, 1420, 1645
Bsp1720I GCTNAGC 2 cut(s) 252, 826
Bsp19I CCATGG 1 cut(s) 1383
BspACI CCGC 1 cut(s) 1679
BspANI GGCC 4 cut(s) 200, 539, 1455, 1660
BspCNI CTCAG 5 cut(s) 49, 112, 1295, 1300, 1348
BspFNI CGCG 1 cut(s) 586
BspLI GGNNCC 1 cut(s) 1455
BspPI GGATC 1 cut(s) 1340
BsrDI GCAATG 1 cut(s) 456
BsrI ACTGG 2 cut(s) 464, 541
BssECI CCNNGG 3 cut(s) 322, 646, 1383
BssMI GATC 8 cut(s) 295, 385, 898, 1069, 1121, 1345, 1420, 1645
BssNAI GTATAC 1 cut(s) 852
BssSI CACGAG 1 cut(s) 1524
BssT1I CCWWGG 1 cut(s) 1383
Bst1107I GTATAC 1 cut(s) 852
Bst2BI CACGAG 1 cut(s) 1524
Bst4CI ACNGT 8 cut(s) 476, 835, 908, 931, 994, 1129, 1208, 1334
BstAPI GCANNNNNTGC 1 cut(s) 344
BstC8I GCNNGC 2 cut(s) 514, 1577
BstDEI CTNAG 9 cut(s) 57, 99, 252, 604, 826, 1282, 1308, 1356, 1491
BstDSI CCRYGG 1 cut(s) 1383
BstF5I GGATG 5 cut(s) 295, 400, 766, 1237, 1393
BstFNI CGCG 1 cut(s) 586
BstH2I RGCGCY 1 cut(s) 645
BstHHI GCGC 1 cut(s) 644
BstKTI GATC 8 cut(s) 298, 388, 901, 1072, 1124, 1348, 1423, 1648
BstMAI GTCTC 2 cut(s) 34, 102
BstMBI GATC 8 cut(s) 295, 385, 898, 1069, 1121, 1345, 1420, 1645
BstMWI GCNNNNNNNGC 5 cut(s) 344, 545, 836, 1040, 1685
BstNSI RCATGY 3 cut(s) 1085, 1139, 1547
BstPAI GACNNNNGTC 1 cut(s) 58
BstSCI CCNGG 1 cut(s) 321
BstSFI CTRYAG 2 cut(s) 904, 1333
BstSLI GKGCMC 3 cut(s) 335, 886, 1457
BstUI CGCG 1 cut(s) 586
BstV1I GCAGC 4 cut(s) 219, 560, 1287, 1337
BstV2I GAAGAC 1 cut(s) 1466
BstZ17I GTATAC 1 cut(s) 852
Bsu36I CCTNAGG 1 cut(s) 1491
BsuI GTATCC 1 cut(s) 1168
BsuRI GGCC 4 cut(s) 200, 539, 1455, 1660
BtgI CCRYGG 1 cut(s) 1383
BtsCI GGATG 5 cut(s) 295, 400, 766, 1237, 1393
BtsI GCAGTG 3 cut(s) 1095, 1509, 1695
BtsIMutI CAGTG 5 cut(s) 913, 1095, 1213, 1509, 1695
Cac8I GCNNGC 2 cut(s) 514, 1577
CfoI GCGC 1 cut(s) 644
Cfr13I GGNCC 8 cut(s) 53, 472, 538, 590, 1453, 1454, 1538, 1659
CseI GACGC 1 cut(s) 609
Csp6I GTAC 3 cut(s) 953, 1486, 1668
CviAII CATG 8 cut(s) 509, 806, 1040, 1082, 1136, 1384, 1450, 1544
CviQI GTAC 3 cut(s) 953, 1486, 1668
DdeI CTNAG 9 cut(s) 57, 99, 252, 604, 826, 1282, 1308, 1356, 1491
DpnI GATC 8 cut(s) 297, 387, 900, 1071, 1123, 1347, 1422, 1647
DpnII GATC 8 cut(s) 295, 385, 898, 1069, 1121, 1345, 1420, 1645
DraIII CACNNNGTG 1 cut(s) 896
Ecl136II GAGCTC 2 cut(s) 1529, 1594
Eco130I CCWWGG 1 cut(s) 1383
Eco24I GRGCYC 3 cut(s) 1457, 1531, 1596
Eco32I GATATC 1 cut(s) 316
Eco47I GGWCC 4 cut(s) 53, 472, 590, 1538
Eco53kI GAGCTC 2 cut(s) 1529, 1594
Eco57I CTGAAG 3 cut(s) 6, 518, 948
Eco81I CCTNAGG 1 cut(s) 1491
Eco88I CYCGRG 2 cut(s) 645, 774
EcoICRI GAGCTC 2 cut(s) 1529, 1594
EcoO109I RGGNCCY 2 cut(s) 53, 1659
EcoRI GAATTC 1 cut(s) 426
EcoRV GATATC 1 cut(s) 316
EcoT14I CCWWGG 1 cut(s) 1383
EcoT38I GRGCYC 3 cut(s) 1457, 1531, 1596
ErhI CCWWGG 1 cut(s) 1383
FaeI CATG 8 cut(s) 512, 809, 1043, 1085, 1139, 1387, 1453, 1547
FalI AAGNNNNNCTT 4 cut(s) 165, 197, 1155, 1187
FaqI GGGAC 1 cut(s) 1601
FatI CATG 8 cut(s) 508, 805, 1039, 1081, 1135, 1383, 1449, 1543
FauI CCCGC 1 cut(s) 1672
FauNDI CATATG 1 cut(s) 270
FbaI TGATCA 1 cut(s) 385
FblI GTMKAC 1 cut(s) 851
Fnu4HI GCNGC 4 cut(s) 208, 549, 1276, 1326
FokI GGATG 5 cut(s) 302, 407, 773, 1244, 1400
FriOI GRGCYC 3 cut(s) 1457, 1531, 1596
Fsp4HI GCNGC 4 cut(s) 208, 549, 1276, 1326
FspBI CTAG 2 cut(s) 939, 1685
GlaI GCGC 1 cut(s) 643
GluI GCNGC 4 cut(s) 208, 549, 1276, 1326
GsaI CCCAGC 1 cut(s) 864
GsuI CTGGAG 1 cut(s) 684
HaeII RGCGCY 1 cut(s) 645
HaeIII GGCC 4 cut(s) 200, 539, 1455, 1660
HapII CCGG 1 cut(s) 322
HgaI GACGC 1 cut(s) 609
HhaI GCGC 1 cut(s) 644
Hin1II CATG 8 cut(s) 512, 809, 1043, 1085, 1139, 1387, 1453, 1547
Hin6I GCGC 1 cut(s) 642
HinP1I GCGC 1 cut(s) 642
HincII GTYRAC 2 cut(s) 934, 1317
HindII GTYRAC 2 cut(s) 934, 1317
HindIII AAGCTT 3 cut(s) 530, 1032, 1169
HinfI GANTC 9 cut(s) 59, 672, 911, 1241, 1304, 1372, 1403, 1462, 1569
HpaII CCGG 1 cut(s) 322
HphI GGTGA 5 cut(s) 889, 1268, 1277, 1282, 1442
Hpy166II GTNNAC 7 cut(s) 307, 599, 852, 934, 953, 1317, 1541
Hpy188I TCNGA 6 cut(s) 102, 1009, 1309, 1357, 1408, 1467
Hpy8I GTNNAC 7 cut(s) 307, 599, 852, 934, 953, 1317, 1541
Hpy99I CGWCG 2 cut(s) 717, 771
HpyAV CCTTC 2 cut(s) 972, 1430
HpyCH4III ACNGT 8 cut(s) 476, 835, 908, 931, 994, 1129, 1208, 1334
HpyCH4IV ACGT 1 cut(s) 787
HpyF10VI GCNNNNNNNGC 5 cut(s) 344, 545, 836, 1040, 1685
HpyF3I CTNAG 9 cut(s) 57, 99, 252, 604, 826, 1282, 1308, 1356, 1491
HpySE526I ACGT 1 cut(s) 787
Hsp92II CATG 8 cut(s) 512, 809, 1043, 1085, 1139, 1387, 1453, 1547
HspAI GCGC 1 cut(s) 642
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 8 cut(s) 295, 385, 898, 1069, 1121, 1345, 1420, 1645
LmnI GCTCC 5 cut(s) 665, 1105, 1114, 1322, 1534
Lsp1109I GCAGC 4 cut(s) 219, 560, 1287, 1337
LweI GCATC 1 cut(s) 385
MaeI CTAG 2 cut(s) 939, 1685
MaeII ACGT 1 cut(s) 787
MaeIII GTNAC 2 cut(s) 32, 1131
MalI GATC 8 cut(s) 297, 387, 900, 1071, 1123, 1347, 1422, 1647
MboI GATC 8 cut(s) 295, 385, 898, 1069, 1121, 1345, 1420, 1645
MfeI CAATTG 1 cut(s) 1514
MhlI GDGCHC 6 cut(s) 335, 886, 1119, 1457, 1531, 1596
MluI ACGCGT 1 cut(s) 584
MlyI GAGTC 4 cut(s) 68, 1313, 1456, 1578
MmeI TCCRAC 1 cut(s) 1068
MroXI GAANNNNTTC 1 cut(s) 1035
MseI TTAA 3 cut(s) 380, 756, 1236
MslI CAYNNNNRTG 1 cut(s) 1428
MspI CCGG 1 cut(s) 322
MspR9I CCNGG 1 cut(s) 323
MunI CAATTG 1 cut(s) 1514
MvnI CGCG 1 cut(s) 586
MwoI GCNNNNNNNGC 5 cut(s) 344, 545, 836, 1040, 1685
NciI CCSGG 1 cut(s) 323
NcoI CCATGG 1 cut(s) 1383
NdeI CATATG 1 cut(s) 270
NdeII GATC 8 cut(s) 295, 385, 898, 1069, 1121, 1345, 1420, 1645
NlaIII CATG 8 cut(s) 512, 809, 1043, 1085, 1139, 1387, 1453, 1547
NlaIV GGNNCC 1 cut(s) 1455
NmuCI GTSAC 1 cut(s) 32
NspI RCATGY 3 cut(s) 1085, 1139, 1547
PaeR7I CTCGAG 1 cut(s) 774
PciI ACATGT 2 cut(s) 1135, 1543
PcsI WCGNNNNNNNCGW 1 cut(s) 772
PdmI GAANNNNTTC 1 cut(s) 1035
PfeI GAWTC 5 cut(s) 672, 911, 1241, 1372, 1403
PkrI GCNGC 4 cut(s) 209, 550, 1277, 1327
PleI GAGTC 4 cut(s) 67, 1312, 1456, 1577
PpsI GAGTC 4 cut(s) 67, 1312, 1456, 1577
PpuMI RGGWCCY 1 cut(s) 53
PscI ACATGT 2 cut(s) 1135, 1543
PshAI GACNNNNGTC 1 cut(s) 58
PsiI TTATAA 2 cut(s) 137, 488
Psp124BI GAGCTC 2 cut(s) 1531, 1596
Psp5II RGGWCCY 1 cut(s) 53
PspFI CCCAGC 1 cut(s) 860
PspN4I GGNNCC 1 cut(s) 1455
PspOMI GGGCCC 1 cut(s) 1453
PspPI GGNCC 8 cut(s) 53, 472, 538, 590, 1453, 1454, 1538, 1659
PspPPI RGGWCCY 1 cut(s) 53
PspXI VCTCGAGB 1 cut(s) 774
RsaI GTAC 3 cut(s) 954, 1487, 1669
RsaNI GTAC 3 cut(s) 953, 1486, 1668
RseI CAYNNNNRTG 1 cut(s) 1428
SacI GAGCTC 2 cut(s) 1531, 1596
SaqAI TTAA 3 cut(s) 380, 756, 1236
SatI GCNGC 4 cut(s) 208, 549, 1276, 1326
Sau3AI GATC 8 cut(s) 295, 385, 898, 1069, 1121, 1345, 1420, 1645
Sau96I GGNCC 8 cut(s) 53, 472, 538, 590, 1453, 1454, 1538, 1659
SchI GAGTC 4 cut(s) 68, 1313, 1456, 1578
ScrFI CCNGG 1 cut(s) 323
SduI GDGCHC 6 cut(s) 335, 886, 1119, 1457, 1531, 1596
SfaNI GCATC 1 cut(s) 385
SfcI CTRYAG 2 cut(s) 904, 1333
Sfr274I CTCGAG 1 cut(s) 774
SinI GGWCC 4 cut(s) 53, 472, 590, 1538
SlaI CTCGAG 1 cut(s) 774
SmiMI CAYNNNNRTG 1 cut(s) 1428
SmlI CTYRAG 4 cut(s) 774, 1109, 1142, 1172
SmoI CTYRAG 4 cut(s) 774, 1109, 1142, 1172
SsiI CCGC 1 cut(s) 1679
SspMI CTAG 2 cut(s) 939, 1685
SstI GAGCTC 2 cut(s) 1531, 1596
StyD4I CCNGG 1 cut(s) 321
StyI CCWWGG 1 cut(s) 1383
TaaI ACNGT 8 cut(s) 476, 835, 908, 931, 994, 1129, 1208, 1334
TaiI ACGT 1 cut(s) 790
TaqI TCGA 7 cut(s) 240, 769, 775, 820, 916, 1401, 1648
TatI WGTACW 1 cut(s) 952
TfiI GAWTC 5 cut(s) 672, 911, 1241, 1372, 1403
Tru1I TTAA 3 cut(s) 380, 756, 1236
Tru9I TTAA 3 cut(s) 380, 756, 1236
TscAI CASTG 5 cut(s) 913, 1102, 1213, 1509, 1695
TseFI GTSAC 1 cut(s) 32
TseI GCWGC 4 cut(s) 207, 548, 1275, 1325
Tsp45I GTSAC 1 cut(s) 32
TspDTI ATGAA 4 cut(s) 186, 664, 1028, 1254
TspRI CASTG 5 cut(s) 913, 1102, 1213, 1509, 1695
VpaK11BI GGWCC 4 cut(s) 53, 472, 590, 1538
XapI RAATTY 3 cut(s) 188, 426, 720
XceI RCATGY 3 cut(s) 1085, 1139, 1547
XhoI CTCGAG 1 cut(s) 774
XmiI GTMKAC 1 cut(s) 851
XmnI GAANNNNTTC 1 cut(s) 1035
XspI CTAG 2 cut(s) 939, 1685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.