Rw0G004050

GTP-BINDING protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00159
OG0005373
Physical Location & Seq
Forward (+)
19548 .. 23296
3749 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G004050.1

Sequence Viewer

Length: 1818 bp
ATGTTGAGAACCATTTCTATCTCCTGGACTCCTCTGAGGTCCCTCTTCCAAAATCGAGCTCCTCATTGTTCAATCCCAAACCAAACCCCATCACCACTATGTACCTCTTCCAGTTTGATCTCCTATTCTCTTTACTCGACGTCATCAAAGCAAGAGAAGGAGGACAGAAATGAGGTCGTTTCGCTTTTCAACAGAGATCCAGCTGCCCCTCCAAGGCTCTTTGTGGTCCAGCCCCGGCTTCGTCCCGATTCTATCTTGCACGCTAAGCTCAACGAAGCTCTCAGCCTTGCTAACTCTCTAGAAGAACAGCGAAATGGATGCTTCGAAAACAATTTGTGTGATAAGGAAACACCACCGCACGTTGTTGTTCAAAACCCAATAGTGAGGCACCAAACTCGTGCTGATACATATTTTGGAAAAGGAACTTTGGAAGCTGTTAAGTGTTATCTGAATGCTGCGGAAGAAAAGGAAAGACATTTTTTTAAATTTCTTTTTAATTTTTTTTTCTCTTCAGATCAAGTGGATGCTGTTTTTGTGAATACAACTCTGTCTGGAATTCAGCAGAGGAACTTGGAGAGAGTGTTGGGCAAACCAGTCTTGGACCGTGTGGGTCTTATAATAGAGATTTTCAATGCTCATGCCTGCACAAAGGAGGGAAAGCTTCAGGCCGAGTTAGCAGCACTAATGTATAAGAAAACAAGACTTATACGAATGCGTGGTCCAGGTGGACGCTTAGGTTTTGGAATGGGTGGAGAAGCTGAAGTTGTTAGTGCCCGAGGGAGAGGAAATGCTGGAGCTGGATTCATTAGTGGGGCAGGAGAAACTGAACTTCAACTTCAACGACGAAGAATTTTAGAAAGGAGGAGTAGTCTGCTGCAACAAATTAAGGATGTTCGTCGTACTCGAGCTGTGCAACGTGCTTCTCGCAAGAGGCATGGAAGCTCTGGTCAAGGCTTAGCTACTGTTGCTGTTGTGGGGTATACAAATGCTGGGAAATCTACATTGGTGAGTGCCCTCTCACATAGTGATCTCTACAGTGATTCTCGATTGTTTGCAACAGTTGACCCTAGATTGAGAAGTGTACTTCTTCCTTCAGGGAGGAAAGTGCTTGTTAGCGATACAGTAGGATTTATTTCAGATTTGCCAGTGCAGTTAGTGGAAGCATTTCATGCGACTTTAGAAGAAGTTGTGGAGGCTGATCTGCTTGTGCATGTGTTGGATTGCACTGCTCCTAATCTTGAGGAGCACCGATCAACTGTGTTACATGTTCTTGAGCAAATCGGTGTATCCAAGGAGAAGCTTGAGAATATGATAGAAGTTTGGAATAAGATTGACAATGAGGGAGAGGATAGGGGAATGGATGTTAATGAATCTCTTGATGATGGTGAAGTGAGCGGCCTCTCAGAAGAAGATGATGTGGATTCTAAGCTGTCACCAGTAGCAGCAAACTGTAAGGCTGATGATCCTTTGTCTGAGCTGTCAGCAGAGAATCCCGAAGCTTTGGATGACCAAGAACTCGATTCAGAAGATAACCAAGATCATTGGGGTGAAGAAGGTGGTTTCAGCATGGGCTCTAAGACTCTGAATGACCAACAAAGTGAGTCCCCTAAGGACTGGGCAGTGGAAAAACAATTGCAATCACAAGCTCCATCTGGTCCACATGTTAGAACTTCTGCCATAACGGGAGTCGGCTTGCAAGAGTTGTTAGAGCTCATTGATGAGAAACTGAAGGTCCCAAATGTTGTGGAAAAGGGTGTATTTGATCGAAAATGGAGGCCCCCTCGTACAGAGGTGGCGGGTCTAGCAGTTGAACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0043021 GO:0043022 GO:0044424 GO:0044464 GO:0044877
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GTP-bdg_M GTP-bdg_N MMR_HSR1

Protein Analysis

605

Amino Acids

66.91

Weight (kDa)

5.5

Isoelectric Point (pI)

44.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP-bdg_N PF13167 127 - 210 4.4e-10 GTP-binding GTPase N-terminal
GTP-bdg_M PF16360 213 - 309 7e-14 GTP-binding GTPase Middle Region
MMR_HSR1 PF01926 321 - 443 1.1e-15 50S ribosome-binding GTPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 617
AatII GACGTC 1 cut(s) 143
AccB1I GGYRCC 1 cut(s) 387
AccBSI CCGCTC 1 cut(s) 1395
AccI GTMKAC 1 cut(s) 980
AciI CCGC 4 cut(s) 356, 458, 1395, 1796
AclWI GGATC 2 cut(s) 191, 1457
AcsI RAATTY 3 cut(s) 485, 555, 849
AcuI CTGAAG 5 cut(s) 495, 647, 780, 1077, 1748
AcyI GRCGYC 1 cut(s) 140
AdeI CACNNNGTG 1 cut(s) 1025
AfaI GTAC 4 cut(s) 103, 901, 1083, 1786
AfiI CCNNNNNNNGG 1 cut(s) 213
AflIII ACRYGT 2 cut(s) 1264, 1660
AgsI TTSAA 7 cut(s) 72, 190, 371, 631, 833, 839, 1811
AjnI CCWGG 2 cut(s) 23, 721
AjuI GAANNNNNNNTTGG 2 cut(s) 986, 1018
Alw21I GWGCWC 3 cut(s) 61, 1248, 1713
AlwI GGATC 2 cut(s) 191, 1457
Ama87I CYCGRG 2 cut(s) 774, 903
AoxI GGCC 3 cut(s) 666, 1396, 1775
ApeKI GCWGC 5 cut(s) 203, 455, 677, 874, 1442
ApoI RAATTY 3 cut(s) 485, 555, 849
ArsI GACNNNNNNTTYG 2 cut(s) 703, 735
Asp700I GAANNNNTTC 2 cut(s) 13, 1164
AspS9I GGNCC 7 cut(s) 39, 226, 601, 719, 1655, 1732, 1776
AsuC2I CCSGG 1 cut(s) 235
AsuHPI GGTGA 5 cut(s) 84, 1018, 1397, 1425, 1559
AsuII TTCGAA 1 cut(s) 324
AvaI CYCGRG 2 cut(s) 774, 903
AvaII GGWCC 6 cut(s) 39, 226, 601, 719, 1655, 1732
AxyI CCTNAGG 1 cut(s) 1608
BaeGI GKGCMC 2 cut(s) 775, 1015
BanI GGYRCC 1 cut(s) 387
BanII GRGCYC 3 cut(s) 61, 1574, 1713
BauI CACGAG 1 cut(s) 396
Bbv12I GWGCWC 3 cut(s) 61, 1248, 1713
BbvI GCAGC 5 cut(s) 190, 442, 689, 861, 1454
BccI CCATC 3 cut(s) 97, 1376, 1657
BcgI CGANNNNNNTGC 4 cut(s) 300, 334, 377, 411
BciT130I CCWGG 2 cut(s) 25, 723
BciVI GTATCC 1 cut(s) 1297
BcnI CCSGG 1 cut(s) 235
BfaI CTAG 3 cut(s) 299, 1068, 1802
BfmI CTRYAG 1 cut(s) 1033
BfuI GTATCC 1 cut(s) 1297
BisI GCNGC 6 cut(s) 204, 456, 678, 875, 1396, 1443
BlpI GCTNAGC 2 cut(s) 264, 955
BlsI GCNGC 6 cut(s) 205, 457, 679, 876, 1397, 1444
Bme1390I CCNGG 3 cut(s) 25, 235, 723
Bme18I GGWCC 6 cut(s) 39, 226, 601, 719, 1655, 1732
BmeT110I CYCGRG 2 cut(s) 774, 903
BmgT120I GGNCC 7 cut(s) 39, 226, 601, 719, 1655, 1732, 1776
BmiI GGNNCC 4 cut(s) 41, 389, 1734, 1778
BmrFI CCNGG 3 cut(s) 25, 235, 723
BmrI ACTGGG 1 cut(s) 1624
BmsI GCATC 2 cut(s) 308, 514
BmuI ACTGGG 1 cut(s) 1624
BplI GAGNNNNNCTC 2 cut(s) 1765, 1797
BpmI CTGGAG 1 cut(s) 813
Bpu10I CCTNAGC 1 cut(s) 733
Bpu1102I GCTNAGC 2 cut(s) 264, 955
Bpu14I TTCGAA 1 cut(s) 324
BpuEI CTTGAG 3 cut(s) 1259, 1292, 1322
BpuMI CCSGG 1 cut(s) 235
BsaHI GRCGYC 1 cut(s) 140
BsaJI CCNNGG 4 cut(s) 212, 233, 775, 1290
BsaXI ACNNNNNCTCC 4 cut(s) 566, 596, 853, 883
Bsc4I CCNNNNNNNGG 1 cut(s) 213
Bse1I ACTGG 5 cut(s) 111, 593, 1145, 1436, 1619
Bse21I CCTNAGG 1 cut(s) 1608
BseBI CCWGG 2 cut(s) 25, 723
BseDI CCNNGG 4 cut(s) 212, 233, 775, 1290
BseGI GGATG 5 cut(s) 323, 529, 895, 1366, 1510
BseLI CCNNNNNNNGG 1 cut(s) 213
BseMII CTCAG 4 cut(s) 26, 295, 1416, 1464
BseNI ACTGG 5 cut(s) 111, 593, 1145, 1436, 1619
BseRI GAGGAG 4 cut(s) 21, 51, 877, 1256
BseSI GKGCMC 2 cut(s) 775, 1015
BseXI GCAGC 5 cut(s) 190, 442, 689, 861, 1454
BseYI CCCAGC 1 cut(s) 989
BsgI GTGCAG 2 cut(s) 628, 1169
BshFI GGCC 3 cut(s) 668, 1398, 1777
BshNI GGYRCC 1 cut(s) 387
BsiHKAI GWGCWC 3 cut(s) 61, 1248, 1713
BsiHKCI CYCGRG 2 cut(s) 774, 903
BsiSI CCGG 1 cut(s) 235
BslFI GGGAC 4 cut(s) 25, 228, 1588, 1718
BslI CCNNNNNNNGG 1 cut(s) 213
BsmFI GGGAC 4 cut(s) 25, 228, 1588, 1718
BsmI GAATGC 2 cut(s) 457, 717
BsnI GGCC 3 cut(s) 668, 1398, 1777
BsoBI CYCGRG 2 cut(s) 774, 903
Bsp119I TTCGAA 1 cut(s) 324
Bsp1286I GDGCHC 6 cut(s) 61, 775, 1015, 1248, 1574, 1713
Bsp143I GATC 9 cut(s) 117, 196, 514, 1027, 1198, 1250, 1462, 1537, 1762
Bsp1720I GCTNAGC 2 cut(s) 264, 955
BspACI CCGC 4 cut(s) 356, 458, 1395, 1796
BspANI GGCC 3 cut(s) 668, 1398, 1777
BspCNI CTCAG 4 cut(s) 27, 294, 1415, 1465
BspLI GGNNCC 4 cut(s) 41, 389, 1734, 1778
BspPI GGATC 2 cut(s) 191, 1457
BspT104I TTCGAA 1 cut(s) 324
BspT107I GGYRCC 1 cut(s) 387
BsrBI CCGCTC 1 cut(s) 1395
BsrI ACTGG 5 cut(s) 111, 593, 1145, 1436, 1619
BssECI CCNNGG 4 cut(s) 212, 233, 775, 1290
BssMI GATC 9 cut(s) 117, 196, 514, 1027, 1198, 1250, 1462, 1537, 1762
BssNAI GTATAC 1 cut(s) 981
BssNI GRCGYC 1 cut(s) 140
BssSI CACGAG 1 cut(s) 396
BssT1I CCWWGG 2 cut(s) 212, 1290
Bst1107I GTATAC 1 cut(s) 981
Bst2BI CACGAG 1 cut(s) 396
Bst2UI CCWGG 2 cut(s) 25, 723
Bst4CI ACNGT 7 cut(s) 605, 964, 1037, 1060, 1123, 1258, 1451
Bst6I CTCTTC 3 cut(s) 50, 112, 514
BstACI GRCGYC 1 cut(s) 140
BstAPI GCANNNNNTGC 1 cut(s) 1169
BstBI TTCGAA 1 cut(s) 324
BstC8I GCNNGC 3 cut(s) 261, 643, 1694
BstF5I GGATG 5 cut(s) 323, 529, 895, 1366, 1510
BstKTI GATC 9 cut(s) 120, 199, 517, 1030, 1201, 1253, 1465, 1540, 1765
BstMBI GATC 9 cut(s) 117, 196, 514, 1027, 1198, 1250, 1462, 1537, 1762
BstMWI GCNNNNNNNGC 5 cut(s) 265, 674, 965, 1169, 1802
BstNI CCWGG 2 cut(s) 25, 723
BstNSI RCATGY 3 cut(s) 1214, 1268, 1664
BstSCI CCNGG 3 cut(s) 23, 233, 721
BstSFI CTRYAG 1 cut(s) 1033
BstSLI GKGCMC 2 cut(s) 775, 1015
BstV1I GCAGC 5 cut(s) 190, 442, 689, 861, 1454
BstX2I RGATCY 1 cut(s) 196
BstYI RGATCY 1 cut(s) 196
BstZ17I GTATAC 1 cut(s) 981
Bsu36I CCTNAGG 1 cut(s) 1608
BsuI GTATCC 1 cut(s) 1297
BsuRI GGCC 3 cut(s) 668, 1398, 1777
BtsCI GGATG 5 cut(s) 323, 529, 895, 1366, 1510
BtsI GCAGTG 2 cut(s) 1224, 1626
BtsIMutI CAGTG 4 cut(s) 1042, 1152, 1224, 1626
Cac8I GCNNGC 3 cut(s) 261, 643, 1694
Cfr13I GGNCC 7 cut(s) 39, 226, 601, 719, 1655, 1732, 1776
CseI GACGC 1 cut(s) 738
Csp6I GTAC 4 cut(s) 102, 900, 1082, 1785
CspCI CAANNNNNGTGG 2 cut(s) 1725, 1760
CviAII CATG 7 cut(s) 638, 935, 1169, 1211, 1265, 1567, 1661
CviQI GTAC 4 cut(s) 102, 900, 1082, 1785
DpnI GATC 9 cut(s) 119, 198, 516, 1029, 1200, 1252, 1464, 1539, 1764
DpnII GATC 9 cut(s) 117, 196, 514, 1027, 1198, 1250, 1462, 1537, 1762
DraI TTTAAA 1 cut(s) 484
DraIII CACNNNGTG 1 cut(s) 1025
Eam1104I CTCTTC 3 cut(s) 50, 112, 514
EarI CTCTTC 3 cut(s) 50, 112, 514
Ecl136II GAGCTC 2 cut(s) 59, 1711
Eco130I CCWWGG 2 cut(s) 212, 1290
Eco24I GRGCYC 3 cut(s) 61, 1574, 1713
Eco47I GGWCC 6 cut(s) 39, 226, 601, 719, 1655, 1732
Eco53kI GAGCTC 2 cut(s) 59, 1711
Eco57I CTGAAG 5 cut(s) 495, 647, 780, 1077, 1748
Eco81I CCTNAGG 1 cut(s) 1608
Eco88I CYCGRG 2 cut(s) 774, 903
EcoICRI GAGCTC 2 cut(s) 59, 1711
EcoO109I RGGNCCY 3 cut(s) 39, 1732, 1776
EcoRI GAATTC 1 cut(s) 555
EcoRII CCWGG 2 cut(s) 23, 721
EcoT14I CCWWGG 2 cut(s) 212, 1290
EcoT38I GRGCYC 3 cut(s) 61, 1574, 1713
ErhI CCWWGG 2 cut(s) 212, 1290
FaeI CATG 7 cut(s) 641, 938, 1172, 1214, 1268, 1570, 1664
FaqI GGGAC 4 cut(s) 25, 228, 1588, 1718
FatI CATG 7 cut(s) 637, 934, 1168, 1210, 1264, 1566, 1660
FauI CCCGC 1 cut(s) 1789
FblI GTMKAC 1 cut(s) 980
Fnu4HI GCNGC 6 cut(s) 204, 456, 678, 875, 1396, 1443
FokI GGATG 5 cut(s) 330, 536, 902, 1373, 1517
FriOI GRGCYC 3 cut(s) 61, 1574, 1713
Fsp4HI GCNGC 6 cut(s) 204, 456, 678, 875, 1396, 1443
FspBI CTAG 3 cut(s) 299, 1068, 1802
GluI GCNGC 6 cut(s) 204, 456, 678, 875, 1396, 1443
GsaI CCCAGC 1 cut(s) 993
GsuI CTGGAG 1 cut(s) 813
HaeIII GGCC 3 cut(s) 668, 1398, 1777
HapII CCGG 1 cut(s) 235
HgaI GACGC 1 cut(s) 738
Hin1I GRCGYC 1 cut(s) 140
Hin1II CATG 7 cut(s) 641, 938, 1172, 1214, 1268, 1570, 1664
HincII GTYRAC 1 cut(s) 1063
HindII GTYRAC 1 cut(s) 1063
HindIII AAGCTT 3 cut(s) 659, 1298, 1497
HpaII CCGG 1 cut(s) 235
HphI GGTGA 5 cut(s) 84, 1018, 1397, 1425, 1559
Hpy166II GTNNAC 5 cut(s) 728, 981, 1063, 1082, 1658
Hpy188I TCNGA 8 cut(s) 36, 450, 514, 1138, 1405, 1474, 1525, 1584
Hpy188III TCNNGA 8 cut(s) 245, 299, 552, 1044, 1238, 1271, 1376, 1493
Hpy8I GTNNAC 5 cut(s) 728, 981, 1063, 1082, 1658
Hpy99I CGWCG 3 cut(s) 142, 846, 900
HpyAV CCTTC 4 cut(s) 151, 1101, 1547, 1723
HpyCH4III ACNGT 7 cut(s) 605, 964, 1037, 1060, 1123, 1258, 1451
HpyCH4IV ACGT 3 cut(s) 140, 360, 916
HpyF10VI GCNNNNNNNGC 5 cut(s) 265, 674, 965, 1169, 1802
HpySE526I ACGT 3 cut(s) 140, 360, 916
Hsp92I GRCGYC 1 cut(s) 140
Hsp92II CATG 7 cut(s) 641, 938, 1172, 1214, 1268, 1570, 1664
Kzo9I GATC 9 cut(s) 117, 196, 514, 1027, 1198, 1250, 1462, 1537, 1762
LmnI GCTCC 5 cut(s) 64, 794, 1234, 1243, 1651
Lsp1109I GCAGC 5 cut(s) 190, 442, 689, 861, 1454
LweI GCATC 2 cut(s) 308, 514
MaeI CTAG 3 cut(s) 299, 1068, 1802
MaeII ACGT 3 cut(s) 140, 360, 916
MaeIII GTNAC 2 cut(s) 1260, 1431
MalI GATC 9 cut(s) 119, 198, 516, 1029, 1200, 1252, 1464, 1539, 1764
MbiI CCGCTC 1 cut(s) 1395
MboI GATC 9 cut(s) 117, 196, 514, 1027, 1198, 1250, 1462, 1537, 1762
MfeI CAATTG 1 cut(s) 1631
MflI RGATCY 1 cut(s) 196
MhlI GDGCHC 6 cut(s) 61, 775, 1015, 1248, 1574, 1713
MluCI AATT 7 cut(s) 331, 485, 496, 555, 849, 882, 1631
MlyI GAGTC 4 cut(s) 22, 1573, 1610, 1695
MmeI TCCRAC 1 cut(s) 1197
MroXI GAANNNNTTC 2 cut(s) 13, 1164
MseI TTAA 5 cut(s) 438, 483, 495, 885, 1365
MslI CAYNNNNRTG 2 cut(s) 97, 1545
MspA1I CMGCKG 1 cut(s) 203
MspI CCGG 1 cut(s) 235
MspR9I CCNGG 3 cut(s) 25, 235, 723
MunI CAATTG 1 cut(s) 1631
Mva1269I GAATGC 2 cut(s) 457, 717
MvaI CCWGG 2 cut(s) 25, 723
MwoI GCNNNNNNNGC 5 cut(s) 265, 674, 965, 1169, 1802
NciI CCSGG 1 cut(s) 235
NdeII GATC 9 cut(s) 117, 196, 514, 1027, 1198, 1250, 1462, 1537, 1762
NlaIII CATG 7 cut(s) 641, 938, 1172, 1214, 1268, 1570, 1664
NlaIV GGNNCC 4 cut(s) 41, 389, 1734, 1778
NmeAIII GCCGAG 1 cut(s) 694
NmuCI GTSAC 1 cut(s) 1431
NspI RCATGY 3 cut(s) 1214, 1268, 1664
NspV TTCGAA 1 cut(s) 324
PaeR7I CTCGAG 1 cut(s) 903
PciI ACATGT 2 cut(s) 1264, 1660
PcsI WCGNNNNNNNCGW 1 cut(s) 901
PctI GAATGC 2 cut(s) 457, 717
PdmI GAANNNNTTC 2 cut(s) 13, 1164
PfeI GAWTC 7 cut(s) 248, 801, 1040, 1370, 1421, 1489, 1520
PfoI TCCNGGA 1 cut(s) 23
PkrI GCNGC 6 cut(s) 205, 457, 679, 876, 1397, 1444
PleI GAGTC 4 cut(s) 22, 1573, 1609, 1694
PpsI GAGTC 4 cut(s) 22, 1573, 1609, 1694
PpuMI RGGWCCY 2 cut(s) 39, 1732
PscI ACATGT 2 cut(s) 1264, 1660
PsiI TTATAA 1 cut(s) 617
Psp124BI GAGCTC 2 cut(s) 61, 1713
Psp5II RGGWCCY 2 cut(s) 39, 1732
Psp6I CCWGG 2 cut(s) 23, 721
PspFI CCCAGC 1 cut(s) 989
PspGI CCWGG 2 cut(s) 23, 721
PspN4I GGNNCC 4 cut(s) 41, 389, 1734, 1778
PspPI GGNCC 7 cut(s) 39, 226, 601, 719, 1655, 1732, 1776
PspPPI RGGWCCY 2 cut(s) 39, 1732
PspXI VCTCGAGB 1 cut(s) 903
PsuI RGATCY 1 cut(s) 196
PvuII CAGCTG 1 cut(s) 203
RsaI GTAC 4 cut(s) 103, 901, 1083, 1786
RsaNI GTAC 4 cut(s) 102, 900, 1082, 1785
RseI CAYNNNNRTG 2 cut(s) 97, 1545
SacI GAGCTC 2 cut(s) 61, 1713
SaqAI TTAA 5 cut(s) 438, 483, 495, 885, 1365
SatI GCNGC 6 cut(s) 204, 456, 678, 875, 1396, 1443
Sau3AI GATC 9 cut(s) 117, 196, 514, 1027, 1198, 1250, 1462, 1537, 1762
Sau96I GGNCC 7 cut(s) 39, 226, 601, 719, 1655, 1732, 1776
SchI GAGTC 4 cut(s) 22, 1573, 1610, 1695
ScrFI CCNGG 3 cut(s) 25, 235, 723
SduI GDGCHC 6 cut(s) 61, 775, 1015, 1248, 1574, 1713
SfaNI GCATC 2 cut(s) 308, 514
SfcI CTRYAG 1 cut(s) 1033
Sfr274I CTCGAG 1 cut(s) 903
SfuI TTCGAA 1 cut(s) 324
SinI GGWCC 6 cut(s) 39, 226, 601, 719, 1655, 1732
SlaI CTCGAG 1 cut(s) 903
SmiMI CAYNNNNRTG 2 cut(s) 97, 1545
SmlI CTYRAG 4 cut(s) 903, 1238, 1271, 1301
SmoI CTYRAG 4 cut(s) 903, 1238, 1271, 1301
Sse9I AATT 7 cut(s) 331, 485, 496, 555, 849, 882, 1631
SsiI CCGC 4 cut(s) 356, 458, 1395, 1796
SspMI CTAG 3 cut(s) 299, 1068, 1802
SstI GAGCTC 2 cut(s) 61, 1713
StyD4I CCNGG 3 cut(s) 23, 233, 721
StyI CCWWGG 2 cut(s) 212, 1290
TaaI ACNGT 7 cut(s) 605, 964, 1037, 1060, 1123, 1258, 1451
TaiI ACGT 3 cut(s) 143, 363, 919
TaqI TCGA 7 cut(s) 55, 137, 324, 904, 1045, 1518, 1765
TasI AATT 7 cut(s) 331, 485, 496, 555, 849, 882, 1631
TatI WGTACW 1 cut(s) 1081
TauI GCSGC 1 cut(s) 1398
TfiI GAWTC 7 cut(s) 248, 801, 1040, 1370, 1421, 1489, 1520
Tru1I TTAA 5 cut(s) 438, 483, 495, 885, 1365
Tru9I TTAA 5 cut(s) 438, 483, 495, 885, 1365
TscAI CASTG 4 cut(s) 1042, 1152, 1231, 1626
TseFI GTSAC 1 cut(s) 1431
TseI GCWGC 5 cut(s) 203, 455, 677, 874, 1442
Tsp45I GTSAC 1 cut(s) 1431
TspDTI ATGAA 3 cut(s) 793, 1157, 1383
TspRI CASTG 4 cut(s) 1042, 1152, 1231, 1626
VpaK11BI GGWCC 6 cut(s) 39, 226, 601, 719, 1655, 1732
XapI RAATTY 3 cut(s) 485, 555, 849
XbaI TCTAGA 1 cut(s) 298
XceI RCATGY 3 cut(s) 1214, 1268, 1664
XhoI CTCGAG 1 cut(s) 903
XmiI GTMKAC 1 cut(s) 980
XmnI GAANNNNTTC 2 cut(s) 13, 1164
XspI CTAG 3 cut(s) 299, 1068, 1802
ZraI GACGTC 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.