Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0010988

Physical Location & Seq

Genomic Coordinates Forward (+)

22810240 .. 22811828

Gene Structure 1589 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00349690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1029 bp

ATGGAGCCACCCTTTACTAGGAAGCTGCTTGTTTCAATTGCCACTTTCAAATACGAAGCTTCCCAAATTGTTTATGCCACCTCGCCTTCCTTCTTCTCCGACAAATCGGCAAAGATCTTTGTCGCCGGCCACCGGGGCCTGGTGGGCTCCGCCATCGTCCGCAAGCTCCAATCCCTAGGCTTCACCAACCTGGTCCTCCGCACCCACGCCGACCTCGACCTGACGCGCCAGAACGACGTGGAGTCCTTCTTCGCCGCCGAGAAGCCCCAATTCGTAATCCTCGCCGCGGCTAAAGTCGGCGGCATCCACGCCAACAACACGTACCCGGCTGACTTCATCGCCCTCAACCTCCAAATCCAGACCAACGTCATCGACGCCTCCCACCGATTCGGAGTCACCAAGCTCCTGTTCCTCGGCTCCTCTTGCATTTACCCCAAGTTCGCGCCCCAGCCCATCCCTGAATCCGCGCTCTTAACAGGCCCACTCGAGCCCACCAACGAGTGGTACGCCATTGCCAAGATCGCCGGCATCAAGATGTGCCAGGCTTACCGGATTCAGCACAACTGGGACGCCATTTCCGGCATGCCTACCAACTTGTATGGCCCGCACGACAACTTCCACCCCGAGAATTCGCACGTGCTGCCGGCATTGATGAGGCGATTTCACGAGGCCAAGGTCAATGGTGCCAAAGAGGTGGTTGTGTGGGGGACTGGAAGTCCCTTGAGGGAGTTTCTGCACGTGGATGATCTCGCCGATGCGGTGGTGTTCTTGATGGGAAGTTACAGTGGGTTGGAGCATGTCAATGTGGGTAGTGGAAAGGAGGTCACTATTAAGGAGTTGGCGGAATTGGTCAAGGAAGTTGTGGGGTTTCAAGGTCAGCTTGTTTGGGACTCGTCCAAGCCCGATGGAACTCCCAGGAAGCTCATGGATAGCTCCAAGCTTGCCGGATTGGGTTGGACCCCGAAGATCTCACTCAAGGAGGGGTTGGTTGGTACCTACAAGTGGTACTTGGAGAATGTCAAGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005975 GO:0005996 GO:0006004 GO:0006005 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009987 GO:0016051 GO:0016491 GO:0016614 GO:0016616 GO:0018130 GO:0019318 GO:0019319 GO:0019438 GO:0034641 GO:0034654 GO:0042350 GO:0042353 GO:0042354 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0046364 GO:0046368 GO:0046483 GO:0050577 GO:0055086 GO:0055114 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00051 ko00520 ko01100 map00051 map00520 map01100

Pfam Domains

Protein Families

Epimerase

Protein Analysis

342

Amino Acids

37.7

Weight (kDa)

8.35

Isoelectric Point (pI)

22.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	38 - 154	4e-07	RmlD substrate binding domain
Epimerase	PF01370	39 - 270	1.4e-63	NAD dependent epimerase/dehydratase family
GDP_Man_Dehyd	PF16363	71 - 329	2.2e-17	GDP-mannose 4,6 dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0010988)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17890 AT1G17890 AT1G17890 AT1G73250
fragaria_vesca	FvH4_4g08850 FvH4_4g08850 FvH4_4g08850
malus_domestica	MD05G1099800.v1.1 MD10G1105500.v1.1
prunus_persica	Prupe.1G100900_v2.0.a1
pyrus_communis	pycom05g09860 pycom10g09090
rosa_chinensis	RchiOBHm_Chr4g0405311
rosa_laevigata	RLG00000008852
rosa_multiflora	Rmu_sc0000161.1_g000028
rosa_roxburghii	Rroxscaffold_5G00349690
rosa_rugosa	Rorug04G0057300
rosa_samantha	Rh4BG125000 Rh4CG137600
rosa_wichuraiana	Rw4G010590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	992
AccB1I	GGYRCC	2 cut(s)	683, 992
AccB7I	CCANNNNNTGG	1 cut(s)	501
AccII	CGCG	4 cut(s)	226, 287, 443, 467
AcoI	YGGCCR	1 cut(s)	127
AcsI	RAATTY	1 cut(s)	628
AcvI	CACGTG	2 cut(s)	637, 739
AcyI	GRCGYC	2 cut(s)	375, 570
AfaI	GTAC	4 cut(s)	323, 506, 994, 1007
AfiI	CCNNNNNNNGG	6 cut(s)	18, 132, 139, 286, 501, 1002
AflIII	ACRYGT	1 cut(s)	318
AgsI	TTSAA	3 cut(s)	36, 49, 872
AhdI	GACNNNNNGTC	2 cut(s)	241, 714
AjiI	CACGTC	1 cut(s)	238
AjnI	CCWGG	4 cut(s)	138, 189, 540, 914
AjuI	GAANNNNNNNTTGG	2 cut(s)	392, 424
AluBI	AGCT	8 cut(s)	25, 59, 166, 403, 880, 922, 933, 940
AluI	AGCT	8 cut(s)	25, 59, 166, 403, 880, 922, 933, 940
Ama87I	CYCGRG	2 cut(s)	485, 623
AoxI	GGCC	5 cut(s)	127, 136, 478, 601, 669
ApeKI	GCWGC	2 cut(s)	25, 640
ApoI	RAATTY	1 cut(s)	628
Asp718I	GGTACC	1 cut(s)	992
AspA2I	CCTAGG	1 cut(s)	175
AspLEI	GCGC	3 cut(s)	228, 445, 469
AspS9I	GGNCC	5 cut(s)	136, 193, 479, 602, 957
AsuC2I	CCSGG	2 cut(s)	134, 326
AsuHPI	GGTGA	2 cut(s)	175, 388
AvaI	CYCGRG	2 cut(s)	485, 623
AvaII	GGWCC	2 cut(s)	193, 957
AvrII	CCTAGG	1 cut(s)	175
BanI	GGYRCC	2 cut(s)	683, 992
BanII	GRGCYC	2 cut(s)	149, 492
BauI	CACGAG	1 cut(s)	665
BbrPI	CACGTG	2 cut(s)	637, 739
BbvI	GCAGC	2 cut(s)	12, 627
BccI	CCATC	4 cut(s)	161, 461, 766, 899
BciT130I	CCWGG	4 cut(s)	140, 191, 542, 916
BcnI	CCSGG	2 cut(s)	134, 326
BfaI	CTAG	2 cut(s)	18, 176
BglI	GCCNNNNNGGC	2 cut(s)	135, 144
BglII	AGATCT	2 cut(s)	114, 966
BisI	GCNGC	6 cut(s)	26, 255, 285, 288, 301, 641
BlnI	CCTAGG	1 cut(s)	175
BlsI	GCNGC	6 cut(s)	27, 256, 286, 289, 302, 642
Bme1390I	CCNGG	6 cut(s)	134, 140, 191, 326, 542, 916
Bme18I	GGWCC	2 cut(s)	193, 957
BmeRI	GACNNNNNGTC	2 cut(s)	241, 714
BmeT110I	CYCGRG	2 cut(s)	485, 623
BmgBI	CACGTC	1 cut(s)	238
BmgT120I	GGNCC	5 cut(s)	136, 193, 479, 602, 957
BmiI	GGNNCC	7 cut(s)	6, 137, 148, 418, 685, 959, 994
BmrFI	CCNGG	6 cut(s)	134, 140, 191, 326, 542, 916
BmrI	ACTGGG	1 cut(s)	574
BmsI	GCATC	3 cut(s)	312, 537, 745
BmuI	ACTGGG	1 cut(s)	574
BoxI	GACNNNNGTC	1 cut(s)	365
BpuEI	CTTGAG	2 cut(s)	742, 959
BpuMI	CCSGG	2 cut(s)	134, 326
BsaAI	YACGTR	3 cut(s)	321, 637, 739
BsaHI	GRCGYC	2 cut(s)	375, 570
BsaJI	CCNNGG	6 cut(s)	133, 175, 285, 412, 672, 914
BsaWI	WCCGGW	1 cut(s)	549
Bsc4I	CCNNNNNNNGG	6 cut(s)	18, 132, 139, 286, 501, 1002
Bse118I	RCCGGY	3 cut(s)	125, 524, 643
Bse1I	ACTGG	2 cut(s)	569, 715
Bse3DI	GCAATG	1 cut(s)	510
BseBI	CCWGG	4 cut(s)	140, 191, 542, 916
BseDI	CCNNGG	6 cut(s)	133, 175, 285, 412, 672, 914
BseGI	GGATG	3 cut(s)	303, 453, 748
BseLI	CCNNNNNNNGG	6 cut(s)	18, 132, 139, 286, 501, 1002
BseMI	GCAATG	1 cut(s)	510
BseNI	ACTGG	2 cut(s)	569, 715
BseRI	GAGGAG	1 cut(s)	409
BseXI	GCAGC	2 cut(s)	12, 627
BseYI	CCCAGC	1 cut(s)	447
BsgI	GTGCAG	1 cut(s)	719
Bsh1236I	CGCG	4 cut(s)	226, 287, 443, 467
BshFI	GGCC	5 cut(s)	129, 138, 480, 603, 671
BshNI	GGYRCC	2 cut(s)	683, 992
BsiHKCI	CYCGRG	2 cut(s)	485, 623
BsiSI	CCGG	8 cut(s)	126, 133, 326, 525, 550, 579, 644, 945
BslFI	GGGAC	4 cut(s)	581, 702, 721, 902
BslI	CCNNNNNNNGG	6 cut(s)	18, 132, 139, 286, 501, 1002
BsmFI	GGGAC	4 cut(s)	581, 702, 721, 902
BsnI	GGCC	5 cut(s)	129, 138, 480, 603, 671
BsoBI	CYCGRG	2 cut(s)	485, 623
Bsp1286I	GDGCHC	2 cut(s)	149, 492
Bsp143I	GATC	4 cut(s)	114, 519, 745, 966
BspANI	GGCC	5 cut(s)	129, 138, 480, 603, 671
BspFNI	CGCG	4 cut(s)	226, 287, 443, 467
BspLI	GGNNCC	7 cut(s)	6, 137, 148, 418, 685, 959, 994
BspT107I	GGYRCC	2 cut(s)	683, 992
BsrDI	GCAATG	1 cut(s)	510
BsrFI	RCCGGY	3 cut(s)	125, 524, 643
BsrI	ACTGG	2 cut(s)	569, 715
BssAI	RCCGGY	3 cut(s)	125, 524, 643
BssECI	CCNNGG	6 cut(s)	133, 175, 285, 412, 672, 914
BssMI	GATC	4 cut(s)	114, 519, 745, 966
BssNI	GRCGYC	2 cut(s)	375, 570
BssSI	CACGAG	1 cut(s)	665
BssT1I	CCWWGG	2 cut(s)	175, 672
Bst2BI	CACGAG	1 cut(s)	665
Bst2UI	CCWGG	4 cut(s)	140, 191, 542, 916
Bst4CI	ACNGT	1 cut(s)	785
BstACI	GRCGYC	2 cut(s)	375, 570
BstAPI	GCANNNNNTGC	1 cut(s)	640
BstBAI	YACGTR	3 cut(s)	321, 637, 739
BstC8I	GCNNGC	7 cut(s)	127, 164, 526, 584, 605, 645, 942
BstDSI	CCRYGG	1 cut(s)	285
BstENI	CCTNNNNNAGG	1 cut(s)	16
BstF5I	GGATG	3 cut(s)	303, 453, 748
BstFNI	CGCG	4 cut(s)	226, 287, 443, 467
BstHHI	GCGC	3 cut(s)	228, 445, 469
BstKTI	GATC	4 cut(s)	117, 522, 748, 969
BstMBI	GATC	4 cut(s)	114, 519, 745, 966
BstMWI	GCNNNNNNNGC	5 cut(s)	135, 144, 423, 521, 640
BstNI	CCWGG	4 cut(s)	140, 191, 542, 916
BstNSI	RCATGY	2 cut(s)	586, 800
BstPAI	GACNNNNGTC	1 cut(s)	365
BstSCI	CCNGG	6 cut(s)	132, 138, 189, 324, 540, 914
BstUI	CGCG	4 cut(s)	226, 287, 443, 467
BstV1I	GCAGC	2 cut(s)	12, 627
BstX2I	RGATCY	2 cut(s)	114, 966
BstXI	CCANNNNNNTGG	1 cut(s)	694
BstYI	RGATCY	2 cut(s)	114, 966
BsuRI	GGCC	5 cut(s)	129, 138, 480, 603, 671
BtgI	CCRYGG	1 cut(s)	285
BtgZI	GCGATG	1 cut(s)	322
BtrI	CACGTC	1 cut(s)	238
BtsCI	GGATG	3 cut(s)	303, 453, 748
BtsIMutI	CAGTG	1 cut(s)	790
Cac8I	GCNNGC	7 cut(s)	127, 164, 526, 584, 605, 645, 942
CfoI	GCGC	3 cut(s)	228, 445, 469
Cfr10I	RCCGGY	3 cut(s)	125, 524, 643
Cfr13I	GGNCC	5 cut(s)	136, 193, 479, 602, 957
Cfr42I	CCGCGG	1 cut(s)	288
CseI	GACGC	3 cut(s)	232, 383, 578
CsiI	ACCWGGT	1 cut(s)	189
Csp6I	GTAC	4 cut(s)	322, 505, 993, 1006
CviAII	CATG	3 cut(s)	583, 797, 925
CviQI	GTAC	4 cut(s)	322, 505, 993, 1006
DpnI	GATC	4 cut(s)	116, 521, 747, 968
DpnII	GATC	4 cut(s)	114, 519, 745, 966
DriI	GACNNNNNGTC	2 cut(s)	241, 714
EaeI	YGGCCR	1 cut(s)	127
Eam1105I	GACNNNNNGTC	2 cut(s)	241, 714
EciI	GGCGGA	2 cut(s)	139, 857
Eco130I	CCWWGG	2 cut(s)	175, 672
Eco24I	GRGCYC	2 cut(s)	149, 492
Eco47I	GGWCC	2 cut(s)	193, 957
Eco72I	CACGTG	2 cut(s)	637, 739
Eco88I	CYCGRG	2 cut(s)	485, 623
EcoNI	CCTNNNNNAGG	1 cut(s)	16
EcoO109I	RGGNCCY	1 cut(s)	136
EcoRI	GAATTC	1 cut(s)	628
EcoRII	CCWGG	4 cut(s)	138, 189, 540, 914
EcoT14I	CCWWGG	2 cut(s)	175, 672
EcoT38I	GRGCYC	2 cut(s)	149, 492
ErhI	CCWWGG	2 cut(s)	175, 672
FaeI	CATG	3 cut(s)	586, 800, 928
FaiI	YATR	5 cut(s)	75, 584, 600, 798, 926
FalI	AAGNNNNNCTT	4 cut(s)	864, 896, 992, 1024
FaqI	GGGAC	4 cut(s)	581, 702, 721, 902
FatI	CATG	3 cut(s)	582, 796, 924
FauI	CCCGC	1 cut(s)	612
Fnu4HI	GCNGC	6 cut(s)	26, 255, 285, 288, 301, 641
FokI	GGATG	3 cut(s)	290, 440, 755
FriOI	GRGCYC	2 cut(s)	149, 492
Fsp4HI	GCNGC	6 cut(s)	26, 255, 285, 288, 301, 641
FspBI	CTAG	2 cut(s)	18, 176
GlaI	GCGC	3 cut(s)	227, 444, 468
GluI	GCNGC	6 cut(s)	26, 255, 285, 288, 301, 641
GsaI	CCCAGC	1 cut(s)	451
HaeIII	GGCC	5 cut(s)	129, 138, 480, 603, 671
HapII	CCGG	8 cut(s)	126, 133, 326, 525, 550, 579, 644, 945
HgaI	GACGC	3 cut(s)	232, 383, 578
HhaI	GCGC	3 cut(s)	228, 445, 469
Hin1I	GRCGYC	2 cut(s)	375, 570
Hin1II	CATG	3 cut(s)	586, 800, 928
Hin6I	GCGC	3 cut(s)	226, 443, 467
HinP1I	GCGC	3 cut(s)	226, 443, 467
HindIII	AAGCTT	2 cut(s)	57, 938
HinfI	GANTC	6 cut(s)	242, 387, 393, 461, 553, 890
HpaII	CCGG	8 cut(s)	126, 133, 326, 525, 550, 579, 644, 945
HphI	GGTGA	2 cut(s)	175, 388
Hpy188I	TCNGA	2 cut(s)	100, 392
Hpy188III	TCNNGA	4 cut(s)	358, 532, 665, 769
Hpy99I	CGWCG	2 cut(s)	239, 377
HpyAV	CCTTC	3 cut(s)	96, 100, 256
HpyCH4III	ACNGT	1 cut(s)	785
HpyCH4IV	ACGT	5 cut(s)	237, 320, 366, 636, 738
HpyCH4V	TGCA	2 cut(s)	426, 736
HpyF10VI	GCNNNNNNNGC	5 cut(s)	135, 144, 423, 521, 640
HpySE526I	ACGT	5 cut(s)	237, 320, 366, 636, 738
Hsp92I	GRCGYC	2 cut(s)	375, 570
Hsp92II	CATG	3 cut(s)	586, 800, 928
HspAI	GCGC	3 cut(s)	226, 443, 467
KpnI	GGTACC	1 cut(s)	996
KroI	GCCGGC	3 cut(s)	125, 524, 643
KroNI	GCCGGC	3 cut(s)	127, 526, 645
KspI	CCGCGG	1 cut(s)	288
Kzo9I	GATC	4 cut(s)	114, 519, 745, 966
LmnI	GCTCC	7 cut(s)	4, 152, 171, 408, 422, 793, 938
Lsp1109I	GCAGC	2 cut(s)	12, 627
LweI	GCATC	3 cut(s)	312, 537, 745
MabI	ACCWGGT	1 cut(s)	189
MaeI	CTAG	2 cut(s)	18, 176
MaeII	ACGT	5 cut(s)	237, 320, 366, 636, 738
MaeIII	GTNAC	3 cut(s)	394, 779, 823
MalI	GATC	4 cut(s)	116, 521, 747, 968
MboI	GATC	4 cut(s)	114, 519, 745, 966
MboII	GAAGA	3 cut(s)	85, 241, 976
MfeI	CAATTG	1 cut(s)	36
MflI	RGATCY	2 cut(s)	114, 966
MhlI	GDGCHC	2 cut(s)	149, 492
MluCI	AATT	5 cut(s)	36, 66, 269, 628, 845
MlyI	GAGTC	3 cut(s)	251, 402, 884
MmeI	TCCRAC	3 cut(s)	123, 771, 935
MroNI	GCCGGC	3 cut(s)	125, 524, 643
MseI	TTAA	2 cut(s)	473, 831
MslI	CAYNNNNRTG	3 cut(s)	533, 741, 801
MspA1I	CMGCKG	1 cut(s)	287
MspI	CCGG	8 cut(s)	126, 133, 326, 525, 550, 579, 644, 945
MspR9I	CCNGG	6 cut(s)	134, 140, 191, 326, 542, 916
MunI	CAATTG	1 cut(s)	36
MvaI	CCWGG	4 cut(s)	140, 191, 542, 916
MvnI	CGCG	4 cut(s)	226, 287, 443, 467
MwoI	GCNNNNNNNGC	5 cut(s)	135, 144, 423, 521, 640
NaeI	GCCGGC	3 cut(s)	127, 526, 645
NciI	CCSGG	2 cut(s)	134, 326
NdeII	GATC	4 cut(s)	114, 519, 745, 966
NgoMIV	GCCGGC	3 cut(s)	125, 524, 643
NlaIII	CATG	3 cut(s)	586, 800, 928
NlaIV	GGNNCC	7 cut(s)	6, 137, 148, 418, 685, 959, 994
NmeAIII	GCCGAG	2 cut(s)	283, 393
NmuCI	GTSAC	2 cut(s)	394, 823
NspI	RCATGY	2 cut(s)	586, 800
PaeI	GCATGC	1 cut(s)	586
PaeR7I	CTCGAG	1 cut(s)	485
PcsI	WCGNNNNNNNCGW	1 cut(s)	213
PdiI	GCCGGC	3 cut(s)	127, 526, 645
PfeI	GAWTC	3 cut(s)	387, 461, 553
PflMI	CCANNNNNTGG	1 cut(s)	501
PkrI	GCNGC	6 cut(s)	27, 256, 286, 289, 302, 642
PleI	GAGTC	3 cut(s)	250, 401, 884
PmaCI	CACGTG	2 cut(s)	637, 739
PmlI	CACGTG	2 cut(s)	637, 739
PpsI	GAGTC	3 cut(s)	250, 401, 884
Ppu21I	YACGTR	3 cut(s)	321, 637, 739
PshAI	GACNNNNGTC	1 cut(s)	365
Psp6I	CCWGG	4 cut(s)	138, 189, 540, 914
PspCI	CACGTG	2 cut(s)	637, 739
PspFI	CCCAGC	1 cut(s)	447
PspGI	CCWGG	4 cut(s)	138, 189, 540, 914
PspN4I	GGNNCC	7 cut(s)	6, 137, 148, 418, 685, 959, 994
PspPI	GGNCC	5 cut(s)	136, 193, 479, 602, 957
PspXI	VCTCGAGB	1 cut(s)	485
PsuI	RGATCY	2 cut(s)	114, 966
RsaI	GTAC	4 cut(s)	323, 506, 994, 1007
RsaNI	GTAC	4 cut(s)	322, 505, 993, 1006
RseI	CAYNNNNRTG	3 cut(s)	533, 741, 801
SacII	CCGCGG	1 cut(s)	288
SaqAI	TTAA	2 cut(s)	473, 831
SatI	GCNGC	6 cut(s)	26, 255, 285, 288, 301, 641
Sau3AI	GATC	4 cut(s)	114, 519, 745, 966
Sau96I	GGNCC	5 cut(s)	136, 193, 479, 602, 957
SchI	GAGTC	3 cut(s)	251, 402, 884
ScrFI	CCNGG	6 cut(s)	134, 140, 191, 326, 542, 916
SduI	GDGCHC	2 cut(s)	149, 492
SexAI	ACCWGGT	1 cut(s)	189
SfaNI	GCATC	3 cut(s)	312, 537, 745
SfiI	GGCCNNNNNGGCC	1 cut(s)	135
Sfr274I	CTCGAG	1 cut(s)	485
Sfr303I	CCGCGG	1 cut(s)	288
SgrBI	CCGCGG	1 cut(s)	288
SinI	GGWCC	2 cut(s)	193, 957
SlaI	CTCGAG	1 cut(s)	485
SmiMI	CAYNNNNRTG	3 cut(s)	533, 741, 801
SmlI	CTYRAG	3 cut(s)	485, 721, 974
SmoI	CTYRAG	3 cut(s)	485, 721, 974
SphI	GCATGC	1 cut(s)	586
Sse9I	AATT	5 cut(s)	36, 66, 269, 628, 845
SspMI	CTAG	2 cut(s)	18, 176
StyD4I	CCNGG	6 cut(s)	132, 138, 189, 324, 540, 914
StyI	CCWWGG	2 cut(s)	175, 672
TaaI	ACNGT	1 cut(s)	785
TaiI	ACGT	5 cut(s)	240, 323, 369, 639, 741
TaqI	TCGA	3 cut(s)	216, 372, 486
TasI	AATT	5 cut(s)	36, 66, 269, 628, 845
TauI	GCSGC	4 cut(s)	257, 287, 290, 303
TfiI	GAWTC	3 cut(s)	387, 461, 553
Tru1I	TTAA	2 cut(s)	473, 831
Tru9I	TTAA	2 cut(s)	473, 831
TscAI	CASTG	1 cut(s)	790
TseFI	GTSAC	2 cut(s)	394, 823
TseI	GCWGC	2 cut(s)	25, 640
Tsp45I	GTSAC	2 cut(s)	394, 823
TspDTI	ATGAA	1 cut(s)	325
TspRI	CASTG	1 cut(s)	790
Van91I	CCANNNNNTGG	1 cut(s)	501
VpaK11BI	GGWCC	2 cut(s)	193, 957
XagI	CCTNNNNNAGG	1 cut(s)	16
XapI	RAATTY	1 cut(s)	628
XceI	RCATGY	2 cut(s)	586, 800
XcmI	CCANNNNNNNNNTGG	1 cut(s)	922
XhoI	CTCGAG	1 cut(s)	485
XmaJI	CCTAGG	1 cut(s)	175
XspI	CTAG	2 cut(s)	18, 176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.