Rroxscaffold_5G00384180

Polygalacturonase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0014180
Physical Location & Seq
Forward (+)
63683610 .. 63688102
4493 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00384180.1

Sequence Viewer

Length: 1605 bp
ATGAGTGCGTTTAGCTTCAGAAGCCTCACATTCATGCTTCTAGTCGCCTTCCTCGTTTGGTCGTCGAATTTCGAGGCTTGCATGGGCAGAAGAGGAAGGCATTGGAGGCACAGCAGAGTTGCCTCGTCTTCTCTTTCAAAGAAAAAAGGGAAAACCTCTCACGGCAGCAGCAGTCACCACCACAATGGCGGAAGTAGCGGATCAAAACCAAAGCCGAAACCGAAACCAAAACCAAAGGCTCCATCTCATAACCAGGCACCAACTCCATCTCATAACAAGGCACCAACTCCACCCCATAACAAGGCGCCATTGCCAGCTCCGGTCCCGAAGCCGAAAGATGACGATCAAGTTTACTCCTATAATGTGCTGGATTTCGGTGCCAAGGGCGATGGCAGTTCCGATGACACAAAGGCATTCCAAGCTGCATGGGCTGCCGCCTGTAAAGTTGAGGCATCAAAGATCATCGTTCCAGCCAATTACAAGTTCCTCGTGGGCCCCATCTCCTTCTCCGGCCCGTACTGCCAACCAAACATCTTATTTCAGCTTGATGGCACAATATTAGCTCCATCAGACTCGAAATGGGGCAAAGGTCTGTTTCAATGGCTCGAATTCACTAAGCTAAGAGGAATAACAGTTCAGGGGAAGGGTGTGATCGACGGAAGAGGCTCGCTTTGGTGGCAAGACACTCCCTACGGAGACCCTTATGATGATGAACTAAAACTCATTATACCACTAAACAGCACACACCCGCCAATGATACCGATAAGGAATGAGCTAAATGGGAAAATTCCAGGCATAAAACCAACAGCACTGAGGTTTTATGGGAGTTTTAACGTGACCGTCACAGGCATAACAATTCAGAATAGCCCCCAATGCCATCTCAAGTTTGACAACTGCGATGGAGTCTTGGTGCACGATATGTCTGTCTCATCTCCCGGTGACAGTCCTAATACTGATGGGATTCACCTACAGAATTCCAAAGATGTGCTCATCCATAGCTCCACTCTTGCTTGCGGAGATGACTGTATTTCCATACAAACTGGATGCTCAAATGTCTACGTACACAATGTGAACTGTGGACCAGGGCATGGAATCAGCATCGGAAGTTTGGGGAAGGATAATACCAAGGCCTGTGTCTCAAACATCACCGTCCGAGACATAGTCATGCACGATACAATGACTGGTGTGAGAGTCAAGACATGGCAGGGTGGATCAGGGTCTGTTCAGGGAGTCCTATTCTCAAACATCCAAGTGAATGAAGTTCAACTTCCTATTGTGATAGACCAGTTCTACTGTGACAAAAGCACTTGCAGAAACCAATCATCAGCTGTGGCGCTCTCAGGAATCACCTACGAGAGAATTCGAGGAACATACACAGTAAAACCTGTACATTTTGCCTGCAGTGACAGCCTACCCTGCGTAGACGTGACACTAAACGGCATACAGCTAAAGCCAGTGCAAGAACGCTATCACATGTATGATCCCTTCTGCTGGCAGACTTTCGGGGAGCTGAGGACCCCGACGCTGCCACCAATTCCGTGTTTACAGATTGGTAAGCCGCCGAACAACAAGGTCAATTCGGATCATGATGCGTGTGACCTTTAG

Protein Analysis

534

Amino Acids

58.13

Weight (kDa)

8.83

Isoelectric Point (pI)

40.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_28 PF00295 149 - 228 6.6e-09 Glycosyl hydrolases family 28
Glyco_hydro_28 PF00295 266 - 484 3.2e-68 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014180)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10640 AT1G60590
fragaria_vesca FvH4_4g34120
malus_domestica MD13G1094100.v1.1 MD16G1095400.v1.1
prunus_persica Prupe.1G251200_v2.0.a1
pyrus_communis pycom13g08200 pycom16g08130
rosa_chinensis RchiOBHm_Chr4g0443631
rosa_laevigata RLG00000005907
rosa_multiflora Rmu_co8340541.1_g000001 Rmu_sc0001118.1_g000012
rosa_roxburghii Rroxscaffold_5G00384180
rosa_samantha Rh2CG614500 Rh4AG405700 Rh4BG416700
rosa_wichuraiana Rw4G034830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 256, 280, 304, 377
AccB7I CCANNNNNTGG 1 cut(s) 1088
AccI GTMKAC 2 cut(s) 1056, 1422
AciI CCGC 6 cut(s) 189, 198, 435, 749, 1014, 1559
AclWI GGATC 4 cut(s) 208, 1219, 1475, 1590
AcsI RAATTY 5 cut(s) 67, 608, 786, 973, 1359
AcyI GRCGYC 1 cut(s) 305
AdeI CACNNNGTG 1 cut(s) 1069
AfaI GTAC 3 cut(s) 518, 1062, 1389
AfiI CCNNNNNNNGG 3 cut(s) 301, 1088, 1491
AflIII ACRYGT 1 cut(s) 1473
AgsI TTSAA 3 cut(s) 138, 599, 1265
AjiI CACGTC 1 cut(s) 1426
AjnI CCWGG 3 cut(s) 252, 790, 1081
AjuI GAANNNNNNNTTGG 2 cut(s) 467, 499
AloI GAACNNNNNNTCC 2 cut(s) 618, 650
Alw21I GWGCWC 2 cut(s) 915, 990
Alw26I GTCTC 4 cut(s) 690, 931, 1141, 1149
Alw44I GTGCAC 1 cut(s) 911
AlwI GGATC 4 cut(s) 208, 1219, 1475, 1590
AlwNI CAGNNNCTG 1 cut(s) 1220
AoxI GGCC 3 cut(s) 493, 511, 1128
ApaI GGGCCC 1 cut(s) 497
ApaLI GTGCAC 1 cut(s) 911
ApeKI GCWGC 5 cut(s) 165, 168, 422, 431, 1525
ApoI RAATTY 5 cut(s) 67, 608, 786, 973, 1359
AspLEI GCGC 2 cut(s) 307, 1336
AspS9I GGNCC 6 cut(s) 322, 493, 494, 512, 1079, 1515
AsuC2I CCSGG 1 cut(s) 936
AsuHPI GGTGA 5 cut(s) 167, 950, 956, 1138, 1339
AvaII GGWCC 3 cut(s) 322, 1079, 1515
BaeGI GKGCMC 2 cut(s) 497, 915
BanI GGYRCC 4 cut(s) 256, 280, 304, 377
BanII GRGCYC 1 cut(s) 497
BarI GAAGNNNNNNTAC 2 cut(s) 1469, 1501
BauI CACGAG 1 cut(s) 488
BbsI GAAGAC 1 cut(s) 120
Bbv12I GWGCWC 2 cut(s) 915, 990
BbvCI CCTCAGC 1 cut(s) 1511
BbvI GCAGC 5 cut(s) 177, 180, 409, 418, 1512
BccI CCATC 9 cut(s) 250, 274, 383, 506, 542, 574, 885, 893, 950
BceAI ACGGC 2 cut(s) 178, 1453
BciT130I CCWGG 3 cut(s) 254, 792, 1083
BcnI CCSGG 1 cut(s) 936
BcoDI GTCTC 4 cut(s) 690, 931, 1141, 1149
BfaI CTAG 1 cut(s) 41
BfmI CTRYAG 2 cut(s) 968, 1399
BfoI RGCGCY 2 cut(s) 308, 1337
BisI GCNGC 7 cut(s) 166, 169, 423, 432, 435, 1526, 1559
BlsI GCNGC 7 cut(s) 167, 170, 424, 433, 436, 1527, 1560
Bme1390I CCNGG 4 cut(s) 254, 792, 936, 1083
Bme18I GGWCC 3 cut(s) 322, 1079, 1515
BmgBI CACGTC 1 cut(s) 1426
BmgT120I GGNCC 6 cut(s) 322, 493, 494, 512, 1079, 1515
BmiI GGNNCC 9 cut(s) 240, 258, 282, 306, 324, 379, 495, 496, 1517
BmrFI CCNGG 4 cut(s) 254, 792, 936, 1083
BmsI GCATC 4 cut(s) 461, 1034, 1107, 1579
BpiI GAAGAC 1 cut(s) 120
Bpu10I CCTNAGC 1 cut(s) 1511
BpuEI CTTGAG 1 cut(s) 866
BpuMI CCSGG 1 cut(s) 936
BsaAI YACGTR 1 cut(s) 1060
BsaBI GATNNNNATC 1 cut(s) 342
BsaHI GRCGYC 1 cut(s) 305
BsaI GGTCTC 1 cut(s) 690
BsaJI CCNNGG 3 cut(s) 381, 1082, 1125
BsaWI WCCGGW 1 cut(s) 319
BsaXI ACNNNNNCTCC 2 cut(s) 894, 924
Bsc4I CCNNNNNNNGG 3 cut(s) 301, 1088, 1491
Bse1I ACTGG 4 cut(s) 1045, 1186, 1285, 1454
Bse3DI GCAATG 1 cut(s) 308
Bse8I GATNNNNATC 1 cut(s) 342
BseBI CCWGG 3 cut(s) 254, 792, 1083
BseDI CCNNGG 3 cut(s) 381, 1082, 1125
BseGI GGATG 3 cut(s) 990, 1049, 1245
BseJI GATNNNNATC 1 cut(s) 342
BseLI CCNNNNNNNGG 3 cut(s) 301, 1088, 1491
BseMI GCAATG 1 cut(s) 308
BseMII CTCAG 3 cut(s) 803, 1353, 1502
BseNI ACTGG 4 cut(s) 1045, 1186, 1285, 1454
BseSI GKGCMC 2 cut(s) 497, 915
BseXI GCAGC 5 cut(s) 177, 180, 409, 418, 1512
BshFI GGCC 3 cut(s) 495, 513, 1130
BshNI GGYRCC 4 cut(s) 256, 280, 304, 377
BsiHKAI GWGCWC 2 cut(s) 915, 990
BsiSI CCGG 3 cut(s) 320, 510, 936
BslFI GGGAC 1 cut(s) 308
BslI CCNNNNNNNGG 3 cut(s) 301, 1088, 1491
BsmAI GTCTC 4 cut(s) 690, 931, 1141, 1149
BsmFI GGGAC 1 cut(s) 308
BsmI GAATGC 1 cut(s) 413
BsnI GGCC 3 cut(s) 495, 513, 1130
Bso31I GGTCTC 1 cut(s) 690
Bsp120I GGGCCC 1 cut(s) 493
Bsp1286I GDGCHC 3 cut(s) 497, 915, 990
Bsp1407I TGTACA 1 cut(s) 1387
Bsp143I GATC 7 cut(s) 200, 343, 459, 651, 1211, 1480, 1582
BspACI CCGC 6 cut(s) 189, 198, 435, 749, 1014, 1559
BspANI GGCC 3 cut(s) 495, 513, 1130
BspCNI CTCAG 3 cut(s) 804, 1352, 1503
BspHI TCATGA 1 cut(s) 1585
BspLI GGNNCC 9 cut(s) 240, 258, 282, 306, 324, 379, 495, 496, 1517
BspMAI CTGCAG 1 cut(s) 1403
BspPI GGATC 4 cut(s) 208, 1219, 1475, 1590
BspT107I GGYRCC 4 cut(s) 256, 280, 304, 377
BspTNI GGTCTC 1 cut(s) 690
BsrDI GCAATG 1 cut(s) 308
BsrGI TGTACA 1 cut(s) 1387
BsrI ACTGG 4 cut(s) 1045, 1186, 1285, 1454
BssECI CCNNGG 3 cut(s) 381, 1082, 1125
BssMI GATC 7 cut(s) 200, 343, 459, 651, 1211, 1480, 1582
BssNI GRCGYC 1 cut(s) 305
BssSI CACGAG 1 cut(s) 488
BssT1I CCWWGG 2 cut(s) 381, 1125
Bst2BI CACGAG 1 cut(s) 488
Bst2UI CCWGG 3 cut(s) 254, 792, 1083
Bst4CI ACNGT 8 cut(s) 634, 841, 944, 1025, 1076, 1150, 1295, 1378
Bst6I CTCTTC 2 cut(s) 85, 655
BstACI GRCGYC 1 cut(s) 305
BstAPI GCANNNNNTGC 1 cut(s) 431
BstAUI TGTACA 1 cut(s) 1387
BstBAI YACGTR 1 cut(s) 1060
BstC8I GCNNGC 6 cut(s) 79, 315, 668, 1012, 1399, 1493
BstDEI CTNAG 5 cut(s) 615, 620, 812, 1339, 1511
BstF5I GGATG 3 cut(s) 990, 1049, 1245
BstH2I RGCGCY 2 cut(s) 308, 1337
BstHHI GCGC 2 cut(s) 307, 1336
BstKTI GATC 7 cut(s) 203, 346, 462, 654, 1214, 1483, 1585
BstMAI GTCTC 4 cut(s) 690, 931, 1141, 1149
BstMBI GATC 7 cut(s) 200, 343, 459, 651, 1211, 1480, 1582
BstNI CCWGG 3 cut(s) 254, 792, 1083
BstNSI RCATGY 1 cut(s) 1477
BstSCI CCNGG 4 cut(s) 252, 790, 934, 1081
BstSFI CTRYAG 2 cut(s) 968, 1399
BstSLI GKGCMC 2 cut(s) 497, 915
BstSNI TACGTA 1 cut(s) 1060
BstV1I GCAGC 5 cut(s) 177, 180, 409, 418, 1512
BstV2I GAAGAC 1 cut(s) 120
BstXI CCANNNNNNTGG 1 cut(s) 185
BsuRI GGCC 3 cut(s) 495, 513, 1130
BtgZI GCGATG 2 cut(s) 402, 912
BtrI CACGTC 1 cut(s) 1426
BtsCI GGATG 3 cut(s) 990, 1049, 1245
BtsI GCAGTG 1 cut(s) 1408
BtsIMutI CAGTG 3 cut(s) 809, 1408, 1461
Cac8I GCNNGC 6 cut(s) 79, 315, 668, 1012, 1399, 1493
CaiI CAGNNNCTG 1 cut(s) 1220
CciI TCATGA 1 cut(s) 1585
CfoI GCGC 2 cut(s) 307, 1336
Cfr13I GGNCC 6 cut(s) 322, 493, 494, 512, 1079, 1515
CseI GACGC 1 cut(s) 1531
Csp6I GTAC 3 cut(s) 517, 1061, 1388
CviAII CATG 8 cut(s) 34, 82, 426, 1088, 1165, 1200, 1474, 1586
CviQI GTAC 3 cut(s) 517, 1061, 1388
DdeI CTNAG 5 cut(s) 615, 620, 812, 1339, 1511
DinI GGCGCC 1 cut(s) 306
DpnI GATC 7 cut(s) 202, 345, 461, 653, 1213, 1482, 1584
DpnII GATC 7 cut(s) 200, 343, 459, 651, 1211, 1480, 1582
DraIII CACNNNGTG 1 cut(s) 1069
Eam1104I CTCTTC 2 cut(s) 85, 655
EarI CTCTTC 2 cut(s) 85, 655
EciI GGCGGA 1 cut(s) 204
Eco105I TACGTA 1 cut(s) 1060
Eco130I CCWWGG 2 cut(s) 381, 1125
Eco147I AGGCCT 1 cut(s) 1130
Eco24I GRGCYC 1 cut(s) 497
Eco31I GGTCTC 1 cut(s) 690
Eco47I GGWCC 3 cut(s) 322, 1079, 1515
EcoO109I RGGNCCY 2 cut(s) 494, 1515
EcoRI GAATTC 3 cut(s) 608, 973, 1359
EcoRII CCWGG 3 cut(s) 252, 790, 1081
EcoT14I CCWWGG 2 cut(s) 381, 1125
EcoT38I GRGCYC 1 cut(s) 497
EgeI GGCGCC 1 cut(s) 306
EheI GGCGCC 1 cut(s) 306
ErhI CCWWGG 2 cut(s) 381, 1125
FaeI CATG 8 cut(s) 37, 85, 429, 1091, 1168, 1203, 1477, 1589
FalI AAGNNNNNCTT 2 cut(s) 1251, 1283
FaqI GGGAC 1 cut(s) 308
FatI CATG 8 cut(s) 33, 81, 425, 1087, 1164, 1199, 1473, 1585
FauI CCCGC 1 cut(s) 756
FblI GTMKAC 2 cut(s) 1056, 1422
Fnu4HI GCNGC 7 cut(s) 166, 169, 423, 432, 435, 1526, 1559
FokI GGATG 3 cut(s) 977, 1056, 1232
FriOI GRGCYC 1 cut(s) 497
Fsp4HI GCNGC 7 cut(s) 166, 169, 423, 432, 435, 1526, 1559
FspBI CTAG 1 cut(s) 41
GlaI GCGC 2 cut(s) 306, 1335
GluI GCNGC 7 cut(s) 166, 169, 423, 432, 435, 1526, 1559
HaeII RGCGCY 2 cut(s) 308, 1337
HaeIII GGCC 3 cut(s) 495, 513, 1130
HapII CCGG 3 cut(s) 320, 510, 936
HgaI GACGC 1 cut(s) 1531
HhaI GCGC 2 cut(s) 307, 1336
Hin1I GRCGYC 1 cut(s) 305
Hin1II CATG 8 cut(s) 37, 85, 429, 1091, 1168, 1203, 1477, 1589
Hin6I GCGC 2 cut(s) 305, 1334
HinP1I GCGC 2 cut(s) 305, 1334
HinfI GANTC 7 cut(s) 572, 903, 961, 1092, 1191, 1230, 1344
HpaII CCGG 3 cut(s) 320, 510, 936
HphI GGTGA 5 cut(s) 167, 950, 956, 1138, 1339
Hpy166II GTNNAC 8 cut(s) 352, 913, 1057, 1063, 1072, 1079, 1423, 1544
Hpy188I TCNGA 7 cut(s) 20, 400, 571, 861, 1103, 1154, 1582
Hpy188III TCNNGA 4 cut(s) 325, 1195, 1341, 1586
Hpy8I GTNNAC 8 cut(s) 352, 913, 1057, 1063, 1072, 1079, 1423, 1544
Hpy99I CGWCG 3 cut(s) 67, 659, 1525
HpyAV CCTTC 6 cut(s) 58, 90, 514, 637, 1108, 1495
HpyCH4III ACNGT 8 cut(s) 634, 841, 944, 1025, 1076, 1150, 1295, 1378
HpyCH4IV ACGT 3 cut(s) 834, 1059, 1425
HpyCH4V TGCA 7 cut(s) 81, 425, 913, 1168, 1311, 1401, 1459
HpyF3I CTNAG 5 cut(s) 615, 620, 812, 1339, 1511
HpySE526I ACGT 3 cut(s) 834, 1059, 1425
Hsp92I GRCGYC 1 cut(s) 305
Hsp92II CATG 8 cut(s) 37, 85, 429, 1091, 1168, 1203, 1477, 1589
HspAI GCGC 2 cut(s) 305, 1334
KasI GGCGCC 1 cut(s) 304
Kzo9I GATC 7 cut(s) 200, 343, 459, 651, 1211, 1480, 1582
LmnI GCTCC 5 cut(s) 244, 322, 568, 1004, 1507
Lsp1109I GCAGC 5 cut(s) 177, 180, 409, 418, 1512
LweI GCATC 4 cut(s) 461, 1034, 1107, 1579
MaeI CTAG 1 cut(s) 41
MaeII ACGT 3 cut(s) 834, 1059, 1425
MaeIII GTNAC 8 cut(s) 173, 835, 841, 938, 1295, 1403, 1426, 1595
MalI GATC 7 cut(s) 202, 345, 461, 653, 1213, 1482, 1584
MboI GATC 7 cut(s) 200, 343, 459, 651, 1211, 1480, 1582
MboII GAAGA 3 cut(s) 102, 120, 672
MhlI GDGCHC 3 cut(s) 497, 915, 990
MluCI AATT 9 cut(s) 67, 475, 608, 786, 855, 973, 1359, 1533, 1576
Mly113I GGCGCC 1 cut(s) 305
MlyI GAGTC 4 cut(s) 566, 912, 1200, 1239
MseI TTAA 1 cut(s) 831
MslI CAYNNNNRTG 5 cut(s) 32, 183, 1163, 1250, 1476
MspA1I CMGCKG 1 cut(s) 1328
MspI CCGG 3 cut(s) 320, 510, 936
MspR9I CCNGG 4 cut(s) 254, 792, 936, 1083
Mva1269I GAATGC 1 cut(s) 413
MvaI CCWGG 3 cut(s) 254, 792, 1083
NarI GGCGCC 1 cut(s) 305
NciI CCSGG 1 cut(s) 936
NdeII GATC 7 cut(s) 200, 343, 459, 651, 1211, 1480, 1582
NlaIII CATG 8 cut(s) 37, 85, 429, 1091, 1168, 1203, 1477, 1589
NlaIV GGNNCC 9 cut(s) 240, 258, 282, 306, 324, 379, 495, 496, 1517
NmuCI GTSAC 8 cut(s) 173, 835, 841, 938, 1295, 1403, 1426, 1595
NspI RCATGY 1 cut(s) 1477
PagI TCATGA 1 cut(s) 1585
PceI AGGCCT 1 cut(s) 1130
PciI ACATGT 1 cut(s) 1473
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PctI GAATGC 1 cut(s) 413
PfeI GAWTC 3 cut(s) 961, 1092, 1344
PflFI GACNNNGTC 1 cut(s) 1160
PflMI CCANNNNNTGG 1 cut(s) 1088
PkrI GCNGC 7 cut(s) 167, 170, 424, 433, 436, 1527, 1560
PleI GAGTC 4 cut(s) 566, 911, 1199, 1238
PluTI GGCGCC 1 cut(s) 308
PpsI GAGTC 4 cut(s) 566, 911, 1199, 1238
Ppu21I YACGTR 1 cut(s) 1060
PpuMI RGGWCCY 1 cut(s) 1515
PscI ACATGT 1 cut(s) 1473
Psp5II RGGWCCY 1 cut(s) 1515
Psp6I CCWGG 3 cut(s) 252, 790, 1081
PspGI CCWGG 3 cut(s) 252, 790, 1081
PspN4I GGNNCC 9 cut(s) 240, 258, 282, 306, 324, 379, 495, 496, 1517
PspOMI GGGCCC 1 cut(s) 493
PspPI GGNCC 6 cut(s) 322, 493, 494, 512, 1079, 1515
PspPPI RGGWCCY 1 cut(s) 1515
PstI CTGCAG 1 cut(s) 1403
PstNI CAGNNNCTG 1 cut(s) 1220
PsyI GACNNNGTC 1 cut(s) 1160
PvuII CAGCTG 1 cut(s) 1328
RsaI GTAC 3 cut(s) 518, 1062, 1389
RsaNI GTAC 3 cut(s) 517, 1061, 1388
RseI CAYNNNNRTG 5 cut(s) 32, 183, 1163, 1250, 1476
SaqAI TTAA 1 cut(s) 831
SatI GCNGC 7 cut(s) 166, 169, 423, 432, 435, 1526, 1559
Sau3AI GATC 7 cut(s) 200, 343, 459, 651, 1211, 1480, 1582
Sau96I GGNCC 6 cut(s) 322, 493, 494, 512, 1079, 1515
SchI GAGTC 4 cut(s) 566, 912, 1200, 1239
ScrFI CCNGG 4 cut(s) 254, 792, 936, 1083
SduI GDGCHC 3 cut(s) 497, 915, 990
SfaNI GCATC 4 cut(s) 461, 1034, 1107, 1579
SfcI CTRYAG 2 cut(s) 968, 1399
SfoI GGCGCC 1 cut(s) 306
SinI GGWCC 3 cut(s) 322, 1079, 1515
SmiMI CAYNNNNRTG 5 cut(s) 32, 183, 1163, 1250, 1476
SmlI CTYRAG 1 cut(s) 881
SmoI CTYRAG 1 cut(s) 881
SnaBI TACGTA 1 cut(s) 1060
Sse9I AATT 9 cut(s) 67, 475, 608, 786, 855, 973, 1359, 1533, 1576
SseBI AGGCCT 1 cut(s) 1130
SsiI CCGC 6 cut(s) 189, 198, 435, 749, 1014, 1559
SspDI GGCGCC 1 cut(s) 304
SspI AATATT 1 cut(s) 558
SspMI CTAG 1 cut(s) 41
StuI AGGCCT 1 cut(s) 1130
StyD4I CCNGG 4 cut(s) 252, 790, 934, 1081
StyI CCWWGG 2 cut(s) 381, 1125
TaaI ACNGT 8 cut(s) 634, 841, 944, 1025, 1076, 1150, 1295, 1378
TaiI ACGT 3 cut(s) 837, 1062, 1428
TaqI TCGA 6 cut(s) 65, 72, 575, 606, 654, 1363
TasI AATT 9 cut(s) 67, 475, 608, 786, 855, 973, 1359, 1533, 1576
TatI WGTACW 1 cut(s) 1387
TauI GCSGC 2 cut(s) 437, 1561
TfiI GAWTC 3 cut(s) 961, 1092, 1344
Tru1I TTAA 1 cut(s) 831
Tru9I TTAA 1 cut(s) 831
TscAI CASTG 3 cut(s) 816, 1408, 1461
TseFI GTSAC 8 cut(s) 173, 835, 841, 938, 1295, 1403, 1426, 1595
TseI GCWGC 5 cut(s) 165, 168, 422, 431, 1525
Tsp45I GTSAC 8 cut(s) 173, 835, 841, 938, 1295, 1403, 1426, 1595
TspDTI ATGAA 3 cut(s) 22, 726, 1272
TspGWI ACGGA 3 cut(s) 672, 708, 1527
TspRI CASTG 3 cut(s) 816, 1408, 1461
Tth111I GACNNNGTC 1 cut(s) 1160
Van91I CCANNNNNTGG 1 cut(s) 1088
VneI GTGCAC 1 cut(s) 911
VpaK11BI GGWCC 3 cut(s) 322, 1079, 1515
XapI RAATTY 5 cut(s) 67, 608, 786, 973, 1359
XceI RCATGY 1 cut(s) 1477
XmiI GTMKAC 2 cut(s) 1056, 1422
XspI CTAG 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.