Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002830

Physical Location & Seq

Genomic Coordinates Reverse (-)

7130284 .. 7144935

Gene Structure 14652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00390980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2829 bp

ATGGACCGAACGTCCGGAAGTATCCCTAAGGTTAGGGTTTTTCTCTTAGCGCCTTCTCTTAGTGGCGTGACTATAATTGGATTACGAAATATGCTTTATTTCCACGGATCTCGAATTATAGTTCTTCACAAGGATGTTGTCATGCTTTTCGGCGACATTCGTAGCTCCAATGAGCTCATGAAACCTTGTGATTCTTCCCGCAACAACATCGATTCGATAGTTCTTAGCAACTATCAATGTAGAGATGGGGAAGTCAAGAACCGACTTGAAATCACGAAGCGGAGGCTATGCCATCTCACTTCTAGGTCGGGAAGTAGGAAGTCACGGACGTTGCCAAATCTTTCTTCGAGTGAGACCCATAACCTTCGGGGTCTTCTTCAATCATACACTCGTCTTGGAGCGAATCATCCATATGACGAGCTCGAGAATCGTATCCGGGATTCCATCGGCCTTGAGATGTTGGCGGATATCACAAACCCACCCGTGATATTCGAGCCGGTTGTTCCTAATGGAGCAAAGTCCAATTTGTTCGGGTTACTCATCCCGAAAGAGAACAAGAAATTAGGGGCGACCGGCGTTGATTGGAGGGCGACGGCGTTGACCGGACGGGCCGACGTGGCGGTCGATTTGGTGAACCGGTGGAATATTTGCTGCGGATTGTTTGGAGATTCCGGTGGCCGGTTCGGTAAGTTTCCGGCCGGTTTTGATGGTTTTGCCGCCGGTTCGGAATCCTTGGGTAGAGGTCTTGAAGCCAACCACCGGAGGACGAAGCCACGACCTCCTTGGTCCAACGGTATCTCTACTACATCGACCATAGAAGAACTCCGTTTGGCTCCAAAACCGGTTGGTGTGCAAACGGTCTCTTTTGAGCGAGTAGTTGCGCATGCGTGCCGCACGCGGGGGTACGGTCGTTGGGGTAGTCCCGTGACCCGACTTCTTCTTCAAGCGCCGTGGACGAGGAGAGCACCAACCTCGTCACAAGGTTCTTTTCTTGCCTTTCGGAAAAGGACTTCTTTGCCTTACGCGGTTGAGAGAAGCACGGGTTTGCTAAAGCGTGACTCTAGCTTCGCCGGGTTGCGAGGGCGTTACCCTTGCTTCGCCGGAAGTAACAATGGCGGTTGTGCTCGCAGCTTGGCTCCCGGGGAGACCGGGACCGGAAGTACGGTCGCCGGGTTGAACCGTAAGATTCTCAAATCGATAACCAAATCTACCAAGAGGCTTTTCGGTTTATTGCGTCTTCCACACCTCGATTTGCACCACACCACCACCGTAGCTCGAAAGAGGAAGGAAAGAGGGTTCGAATGGGACGGGTTGTGTCCGATTTGGTCGCCGGAGGGTGGAGTTCCGGCCGGATTTGGGTTTCGGGTCGGGTCGGGTCGGGCGCGGTCGCGTGCGAGAGAAAAGGAGAGAATGGAGGAGTATGAGGCAGAGCCACCCCCTCCCGGCGTTCCTGCAACTAGTTCCTCACTGCCTCATCCTACTCAAATTGAAATTGCTGCGCAAAATGTGGTGTTGCATGAACAAGAGATTGCTACGCAGAATATCATACGAACTCAAAGAGAAGCAAGAGCTGTGGGTGGCTCTCTTGAGGATGACTCGGACATCTTCTCTGAACGCCTTGATCCCAGCGCTCTCAAGGAGCATCTATTGAAGATGACCTCGGAACATCGAGCTCTTATGGCTGTAAAACGTGGCAAATCATCTACTGTCCTTGATCAACAAGCAGGTAACTTAGAAATTGGAAACGGCTATGGCGTACCAGGCGGAGGTGCTTATCAGGGTGGGACGAGGTCTATTAGTACTCCGCCTAGGAATTTGGGAGTTGGAATCAATGAAATGGGACAGATGAACTTTGAGCCTGATAAGGACTTTGAACAGAAACCTCCATCTAAAGAATTGTCCGAGTATCTTAAGAAAAAGTTGCGAGATAGGGGTATTCTTAAAGATGACTCAAACAAAGACAACCTTAACATAAAAAGTGCTTCAGCCCAACAGATGGAATATGGGAAATTGCCTCCTGGATGGGTGGCAGCAAAAGACCCTGCAAGTGGTGCTTTGTATTATTTTAATGAGACCACAGGGAGGAGTCAATGGGAAAAGCCTGCTGAAACATCTTCTAATACACCACTTCCATCACCTTTATCCCTTCCGGAAGATTGGGTGGAGGCTTTGGATGAAACAACAGGTCACAAGTATTACTACAATATGAAGACACATGTCTCACAATGGAAACACCCTGACTCTCGACATTTTGTTCATTGGGATGAACAATCATCTGAGCTACAAGTAGAAAAGGATCAATTATCCAAACAAAAGAGATGCGTGGGTTGTGGTGGATGGGGAGTAGGCCTTGTTCAGACATGGGATTACTGCAATCATTGCACGAGAATTCTTGGTCTTCCACAAAGCCAGTACATGACAACTAGCTTGAATTTTAATCACCAGACCACAAGTCCTGCAGATACCAAAGGTGATTTGGACAAAAAGGCCACCATGCAGAGGTCTAATCAGAAACCTCCAATGGGAAAAGGGAATAGAAGAGAGAGTAGGAAACGTGCTCACTCTGAGGATGATGAATTGGATCCCATGGACCCCAGCTCTTATTCAGATGCTCCCCGTGGTGGCTGGGTGGTAGGCCTCAAAGGAGTGCAACCACGAGCAGCTGATACCACTGCTACAGGTCCTCTCTTCCAACAGCGTCCATACCCATCACCAGGTGCTGTCTTGAGAAAGAATGCTGAAATTGCTTCACAAACCAAGTCAAGCTCACATTTAGCGCCTATATCCAAAAGAGGGGACGGGAGTGATGGACTTGGTGATGCTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000380 GO:0000398 GO:0001817 GO:0001819 GO:0002218 GO:0002230 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0002697 GO:0002831 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006355 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0014070 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0022008 GO:0030030 GO:0030154 GO:0030182 GO:0031175 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0032101 GO:0032479 GO:0032481 GO:0032501 GO:0032502 GO:0034641 GO:0042221 GO:0043021 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043330 GO:0043331 GO:0043484 GO:0043900 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045088 GO:0045089 GO:0045935 GO:0046483 GO:0048468 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050688 GO:0050691 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071359 GO:0071360 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0098542 GO:0120036 GO:0140110 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Protein Analysis

942

Amino Acids

103.61

Weight (kDa)

9.5

Isoelectric Point (pI)

48.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	671 - 701	1.3e-13	WW domain
WW	PF00397	716 - 746	2.1e-11	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002830)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41020 AT2G41020
fragaria_vesca	FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230 FvH4_1g29230
malus_domestica	MD00G1150000.v1.1
prunus_persica	Prupe.7G020500_v2.0.a1 Prupe.7G020500_v2.0.a1 Prupe.7G020500_v2.0.a1 Prupe.7G020500_v2.0.a1
pyrus_communis	pycom12g09100
rosa_chinensis	RchiOBHm_Chr3g0494671
rosa_laevigata	RLG00000022665
rosa_multiflora	Rmu_co8203624.1_g000001 Rmu_sc0000840.1_g000006
rosa_roxburghii	Rroxscaffold_6G00390980
rosa_rugosa	Rorug03G0266500 Rorug03G0266600 Rorug03G0266700 Rorug03G0266800 Rorug03G0266900 Rorug03G0266900
rosa_samantha	Rh3AG316300 Rh3BG351700 Rh3CG348600 Rh3DG351300
rosa_wichuraiana	Rw3G027610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	620
Acc16I	TGCGCA	2 cut(s)	882, 1500
Acc36I	ACCTGC	1 cut(s)	1715
AccB7I	CCANNNNNTGG	1 cut(s)	1996
AccII	CGCG	4 cut(s)	898, 1025, 1384, 1390
AccIII	TCCGGA	2 cut(s)	14, 2149
AclWI	GGATC	5 cut(s)	115, 1616, 2304, 2576, 2589
AcoI	YGGCCR	3 cut(s)	676, 696, 1347
AcsI	RAATTY	3 cut(s)	1813, 2388, 2431
AcuI	CTGAAG	1 cut(s)	1968
AdeI	CACNNNGTG	1 cut(s)	2717
AfaI	GTAC	5 cut(s)	905, 1162, 1758, 1801, 2414
AfeI	AGCGCT	1 cut(s)	1630
AflII	CTTAAG	1 cut(s)	1910
AflIII	ACRYGT	1 cut(s)	2215
AgeI	ACCGGT	2 cut(s)	636, 841
AgsI	TTSAA	9 cut(s)	269, 380, 749, 944, 1177, 1490, 1651, 1874, 2431
AhdI	GACNNNNNGTC	2 cut(s)	10, 2451
AhlI	ACTAGT	1 cut(s)	1457
AjiI	CACGTC	1 cut(s)	616
AjnI	CCWGG	3 cut(s)	1759, 2017, 2713
AjuI	GAANNNNNNNTTGG	4 cut(s)	328, 360, 1205, 1237
AloI	GAACNNNNNNTCC	2 cut(s)	1280, 1312
Alw21I	GWGCWC	6 cut(s)	177, 423, 967, 1126, 1675, 2560
Alw26I	GTCTC	5 cut(s)	347, 865, 1139, 2066, 2224
AlwI	GGATC	5 cut(s)	115, 1616, 2304, 2576, 2589
AlwNI	CAGNNNCTG	1 cut(s)	2720
Ama87I	CYCGRG	2 cut(s)	422, 1139
Aor13HI	TCCGGA	2 cut(s)	14, 2149
Aor51HI	AGCGCT	1 cut(s)	1630
AoxI	GGCC	8 cut(s)	448, 609, 676, 696, 1347, 2347, 2487, 2635
ApeKI	GCWGC	5 cut(s)	651, 1128, 1496, 2030, 2660
ApoI	RAATTY	3 cut(s)	1813, 2388, 2431
ArsI	GACNNNNNNTTYG	2 cut(s)	1049, 1081
AsiGI	ACCGGT	2 cut(s)	636, 841
AspA2I	CCTAGG	1 cut(s)	1808
AspLEI	GCGC	7 cut(s)	52, 883, 949, 1384, 1501, 1631, 2779
AspS9I	GGNCC	6 cut(s)	4, 609, 786, 1152, 2590, 2681
AsuC2I	CCSGG	7 cut(s)	437, 1072, 1140, 1141, 1150, 1171, 1443
AsuHPI	GGTGA	6 cut(s)	643, 2127, 2432, 2483, 2703, 2828
AsuII	TTCGAA	1 cut(s)	1299
AvaI	CYCGRG	2 cut(s)	422, 1139
AvaII	GGWCC	5 cut(s)	4, 786, 1152, 2590, 2681
AvrII	CCTAGG	1 cut(s)	1808
AxyI	CCTNAGG	1 cut(s)	27
BaeI	ACNNNNGTAYC	2 cut(s)	895, 928
BamHI	GGATCC	1 cut(s)	2581
BanII	GRGCYC	3 cut(s)	177, 423, 1675
BauI	CACGAG	2 cut(s)	2383, 2655
BbsI	GAAGAC	4 cut(s)	365, 1229, 2216, 2390
Bbv12I	GWGCWC	6 cut(s)	177, 423, 967, 1126, 1675, 2560
BbvI	GCAGC	5 cut(s)	638, 1140, 1483, 2042, 2672
BceAI	ACGGC	3 cut(s)	609, 934, 1762
BcgI	CGANNNNNNTGC	4 cut(s)	190, 224, 954, 988
BciT130I	CCWGG	3 cut(s)	1761, 2019, 2715
BciVI	GTATCC	2 cut(s)	32, 443
BclI	TGATCA	1 cut(s)	1714
BcnI	CCSGG	7 cut(s)	437, 1072, 1140, 1141, 1150, 1171, 1443
BcoDI	GTCTC	5 cut(s)	347, 865, 1139, 2066, 2224
BcuI	ACTAGT	1 cut(s)	1457
BfaI	CTAG	5 cut(s)	303, 1062, 1458, 1809, 2424
BfmI	CTRYAG	2 cut(s)	2457, 2676
BfoI	RGCGCY	4 cut(s)	53, 950, 1632, 2780
BfrI	CTTAAG	1 cut(s)	1910
BfuAI	ACCTGC	1 cut(s)	1715
BfuI	GTATCC	2 cut(s)	32, 443
BglI	GCCNNNNNGGC	1 cut(s)	617
BisI	GCNGC	7 cut(s)	652, 717, 892, 1129, 1497, 2031, 2661
BlnI	CCTAGG	1 cut(s)	1808
BlsI	GCNGC	7 cut(s)	653, 718, 893, 1130, 1498, 2032, 2662
BmcAI	AGTACT	1 cut(s)	1801
Bme18I	GGWCC	5 cut(s)	4, 786, 1152, 2590, 2681
BmeRI	GACNNNNNGTC	2 cut(s)	10, 2451
BmeT110I	CYCGRG	2 cut(s)	422, 1139
BmgBI	CACGTC	1 cut(s)	616
BmgT120I	GGNCC	6 cut(s)	4, 609, 786, 1152, 2590, 2681
BmiI	GGNNCC	5 cut(s)	834, 1137, 1153, 2583, 2592
BmsI	GCATC	4 cut(s)	1651, 2309, 2599, 2809
BoxI	GACNNNNGTC	1 cut(s)	2216
BpiI	GAAGAC	4 cut(s)	365, 1229, 2216, 2390
BplI	GAGNNNNNCTC	2 cut(s)	1580, 1612
Bpu14I	TTCGAA	1 cut(s)	1299
BpuEI	CTTGAG	4 cut(s)	473, 1607, 1619, 2746
BpuMI	CCSGG	7 cut(s)	437, 1072, 1140, 1141, 1150, 1171, 1443
Bsa29I	ATCGAT	2 cut(s)	210, 1196
BsaI	GGTCTC	4 cut(s)	347, 865, 1139, 2066
BsaWI	WCCGGW	8 cut(s)	14, 602, 636, 671, 759, 841, 1154, 2149
Bse118I	RCCGGY	7 cut(s)	496, 572, 636, 678, 698, 719, 841
Bse1I	ACTGG	1 cut(s)	2410
Bse21I	CCTNAGG	1 cut(s)	27
Bse3DI	GCAATG	1 cut(s)	2377
BseAI	TCCGGA	2 cut(s)	14, 2149
BseBI	CCWGG	3 cut(s)	1761, 2019, 2715
BseCI	ATCGAT	2 cut(s)	210, 1196
BseMI	GCAATG	1 cut(s)	2377
BseMII	CTCAG	2 cut(s)	2268, 2556
BseNI	ACTGG	1 cut(s)	2410
BseRI	GAGGAG	3 cut(s)	973, 1430, 2098
BseX3I	CGGCCG	2 cut(s)	696, 1347
BseXI	GCAGC	5 cut(s)	638, 1140, 1483, 2042, 2672
BseYI	CCCAGC	3 cut(s)	1625, 2594, 2625
Bsh1236I	CGCG	4 cut(s)	898, 1025, 1384, 1390
Bsh1285I	CGRYCG	7 cut(s)	573, 624, 699, 910, 1167, 1350, 1388
BshFI	GGCC	8 cut(s)	450, 611, 678, 698, 1349, 2349, 2489, 2637
BshTI	ACCGGT	2 cut(s)	636, 841
BshVI	ATCGAT	2 cut(s)	210, 1196
BsiEI	CGRYCG	7 cut(s)	573, 624, 699, 910, 1167, 1350, 1388
BsiHKAI	GWGCWC	6 cut(s)	177, 423, 967, 1126, 1675, 2560
BsiHKCI	CYCGRG	2 cut(s)	422, 1139
BslFI	GGGAC	6 cut(s)	906, 1165, 1319, 1798, 1854, 2810
BsmAI	GTCTC	5 cut(s)	347, 865, 1139, 2066, 2224
BsmFI	GGGAC	6 cut(s)	906, 1165, 1319, 1798, 1854, 2810
BsmI	GAATGC	1 cut(s)	2740
BsnI	GGCC	8 cut(s)	450, 611, 678, 698, 1349, 2349, 2489, 2637
Bso31I	GGTCTC	4 cut(s)	347, 865, 1139, 2066
BsoBI	CYCGRG	2 cut(s)	422, 1139
Bsp119I	TTCGAA	1 cut(s)	1299
Bsp1286I	GDGCHC	6 cut(s)	177, 423, 967, 1126, 1675, 2560
Bsp13I	TCCGGA	2 cut(s)	14, 2149
Bsp143I	GATC	5 cut(s)	107, 1621, 1714, 2296, 2581
Bsp19I	CCATGG	1 cut(s)	2586
BspANI	GGCC	8 cut(s)	450, 611, 678, 698, 1349, 2349, 2489, 2637
BspCNI	CTCAG	2 cut(s)	2269, 2557
BspDI	ATCGAT	2 cut(s)	210, 1196
BspEI	TCCGGA	2 cut(s)	14, 2149
BspFNI	CGCG	4 cut(s)	898, 1025, 1384, 1390
BspHI	TCATGA	1 cut(s)	177
BspLI	GGNNCC	5 cut(s)	834, 1137, 1153, 2583, 2592
BspMAI	CTGCAG	1 cut(s)	2461
BspMI	ACCTGC	1 cut(s)	1715
BspPI	GGATC	5 cut(s)	115, 1616, 2304, 2576, 2589
BspT104I	TTCGAA	1 cut(s)	1299
BspTI	CTTAAG	1 cut(s)	1910
BspTNI	GGTCTC	4 cut(s)	347, 865, 1139, 2066
BsrDI	GCAATG	1 cut(s)	2377
BsrFI	RCCGGY	7 cut(s)	496, 572, 636, 678, 698, 719, 841
BsrI	ACTGG	1 cut(s)	2410
BssAI	RCCGGY	7 cut(s)	496, 572, 636, 678, 698, 719, 841
BssMI	GATC	5 cut(s)	107, 1621, 1714, 2296, 2581
BssSI	CACGAG	2 cut(s)	2383, 2655
BssT1I	CCWWGG	4 cut(s)	732, 782, 1808, 2586
Bst2BI	CACGAG	2 cut(s)	2383, 2655
Bst2UI	CCWGG	3 cut(s)	1761, 2019, 2715
Bst4CI	ACNGT	7 cut(s)	794, 859, 908, 1165, 1181, 1270, 1708
Bst6I	CTCTTC	2 cut(s)	2533, 2693
BstAFI	CTTAAG	1 cut(s)	1910
BstAPI	GCANNNNNTGC	2 cut(s)	2051, 2379
BstBI	TTCGAA	1 cut(s)	1299
BstC8I	GCNNGC	6 cut(s)	885, 889, 896, 1126, 1392, 2103
BstDEI	CTNAG	7 cut(s)	27, 46, 59, 224, 1732, 2277, 2565
BstDSI	CCRYGG	4 cut(s)	103, 950, 2586, 2617
BstFNI	CGCG	4 cut(s)	898, 1025, 1384, 1390
BstH2I	RGCGCY	4 cut(s)	53, 950, 1632, 2780
BstHHI	GCGC	7 cut(s)	52, 883, 949, 1384, 1501, 1631, 2779
BstKTI	GATC	5 cut(s)	110, 1624, 1717, 2299, 2584
BstMAI	GTCTC	5 cut(s)	347, 865, 1139, 2066, 2224
BstMBI	GATC	5 cut(s)	107, 1621, 1714, 2296, 2581
BstMCI	CGRYCG	7 cut(s)	573, 624, 699, 910, 1167, 1350, 1388
BstMWI	GCNNNNNNNGC	6 cut(s)	617, 1679, 1761, 2051, 2379, 2744
BstNI	CCWGG	3 cut(s)	1761, 2019, 2715
BstNSI	RCATGY	2 cut(s)	887, 2219
BstPAI	GACNNNNGTC	1 cut(s)	2216
BstSFI	CTRYAG	2 cut(s)	2457, 2676
BstUI	CGCG	4 cut(s)	898, 1025, 1384, 1390
BstV1I	GCAGC	5 cut(s)	638, 1140, 1483, 2042, 2672
BstV2I	GAAGAC	4 cut(s)	365, 1229, 2216, 2390
BstX2I	RGATCY	2 cut(s)	107, 2581
BstYI	RGATCY	2 cut(s)	107, 2581
BstZI	CGGCCG	2 cut(s)	696, 1347
Bsu15I	ATCGAT	2 cut(s)	210, 1196
Bsu36I	CCTNAGG	1 cut(s)	27
BsuI	GTATCC	2 cut(s)	32, 443
BsuRI	GGCC	8 cut(s)	450, 611, 678, 698, 1349, 2349, 2489, 2637
BsuTUI	ATCGAT	2 cut(s)	210, 1196
BtgI	CCRYGG	4 cut(s)	103, 950, 2586, 2617
BtrI	CACGTC	1 cut(s)	616
BtsI	GCAGTG	2 cut(s)	1466, 2670
BtsIMutI	CAGTG	2 cut(s)	1466, 2670
BveI	ACCTGC	1 cut(s)	1715
Cac8I	GCNNGC	6 cut(s)	885, 889, 896, 1126, 1392, 2103
CaiI	CAGNNNCTG	1 cut(s)	2720
CciI	TCATGA	1 cut(s)	177
CfoI	GCGC	7 cut(s)	52, 883, 949, 1384, 1501, 1631, 2779
Cfr10I	RCCGGY	7 cut(s)	496, 572, 636, 678, 698, 719, 841
Cfr13I	GGNCC	6 cut(s)	4, 609, 786, 1152, 2590, 2681
Cfr9I	CCCGGG	1 cut(s)	1139
ClaI	ATCGAT	2 cut(s)	210, 1196
CseI	GACGC	2 cut(s)	1223, 2687
CsiI	ACCWGGT	1 cut(s)	2713
Csp6I	GTAC	5 cut(s)	904, 1161, 1757, 1800, 2413
CspAI	ACCGGT	2 cut(s)	636, 841
CspCI	CAANNNNNGTGG	4 cut(s)	932, 967, 1554, 1589
CviAII	CATG	9 cut(s)	142, 178, 884, 1517, 2216, 2361, 2416, 2494, 2587
CviQI	GTAC	5 cut(s)	904, 1161, 1757, 1800, 2413
DdeI	CTNAG	7 cut(s)	27, 46, 59, 224, 1732, 2277, 2565
DpnI	GATC	5 cut(s)	109, 1623, 1716, 2298, 2583
DpnII	GATC	5 cut(s)	107, 1621, 1714, 2296, 2581
DraIII	CACNNNGTG	1 cut(s)	2717
DrdI	GACNNNNNNGTC	1 cut(s)	620
DriI	GACNNNNNGTC	2 cut(s)	10, 2451
DseDI	GACNNNNNNGTC	1 cut(s)	620
EaeI	YGGCCR	3 cut(s)	676, 696, 1347
EagI	CGGCCG	2 cut(s)	696, 1347
Eam1104I	CTCTTC	2 cut(s)	2533, 2693
Eam1105I	GACNNNNNGTC	2 cut(s)	10, 2451
EarI	CTCTTC	2 cut(s)	2533, 2693
EciI	GGCGGA	3 cut(s)	479, 1779, 1794
Ecl136II	GAGCTC	3 cut(s)	175, 421, 1673
EclXI	CGGCCG	2 cut(s)	696, 1347
Eco130I	CCWWGG	4 cut(s)	732, 782, 1808, 2586
Eco147I	AGGCCT	2 cut(s)	2349, 2637
Eco24I	GRGCYC	3 cut(s)	177, 423, 1675
Eco31I	GGTCTC	4 cut(s)	347, 865, 1139, 2066
Eco32I	GATATC	1 cut(s)	469
Eco47I	GGWCC	5 cut(s)	4, 786, 1152, 2590, 2681
Eco47III	AGCGCT	1 cut(s)	1630
Eco52I	CGGCCG	2 cut(s)	696, 1347
Eco53kI	GAGCTC	3 cut(s)	175, 421, 1673
Eco57I	CTGAAG	1 cut(s)	1968
Eco81I	CCTNAGG	1 cut(s)	27
Eco88I	CYCGRG	2 cut(s)	422, 1139
EcoICRI	GAGCTC	3 cut(s)	175, 421, 1673
EcoO109I	RGGNCCY	1 cut(s)	2681
EcoRI	GAATTC	1 cut(s)	2388
EcoRII	CCWGG	3 cut(s)	1759, 2017, 2713
EcoRV	GATATC	1 cut(s)	469
EcoT14I	CCWWGG	4 cut(s)	732, 782, 1808, 2586
EcoT38I	GRGCYC	3 cut(s)	177, 423, 1675
ErhI	CCWWGG	4 cut(s)	732, 782, 1808, 2586
FaeI	CATG	9 cut(s)	145, 181, 887, 1520, 2219, 2364, 2419, 2497, 2590
FalI	AAGNNNNNCTT	6 cut(s)	997, 1029, 1950, 1982, 2038, 2070
FaqI	GGGAC	6 cut(s)	906, 1165, 1319, 1798, 1854, 2810
FatI	CATG	9 cut(s)	141, 177, 883, 1516, 2215, 2360, 2415, 2493, 2586
FauI	CCCGC	2 cut(s)	206, 891
FauNDI	CATATG	1 cut(s)	412
FbaI	TGATCA	1 cut(s)	1714
Fnu4HI	GCNGC	7 cut(s)	652, 717, 892, 1129, 1497, 2031, 2661
FriOI	GRGCYC	3 cut(s)	177, 423, 1675
Fsp4HI	GCNGC	7 cut(s)	652, 717, 892, 1129, 1497, 2031, 2661
FspBI	CTAG	5 cut(s)	303, 1062, 1458, 1809, 2424
FspI	TGCGCA	2 cut(s)	882, 1500
GlaI	GCGC	7 cut(s)	51, 882, 948, 1383, 1500, 1630, 2778
GluI	GCNGC	7 cut(s)	652, 717, 892, 1129, 1497, 2031, 2661
GsaI	CCCAGC	3 cut(s)	1629, 2598, 2629
HaeII	RGCGCY	4 cut(s)	53, 950, 1632, 2780
HaeIII	GGCC	8 cut(s)	450, 611, 678, 698, 1349, 2349, 2489, 2637
HgaI	GACGC	2 cut(s)	1223, 2687
HhaI	GCGC	7 cut(s)	52, 883, 949, 1384, 1501, 1631, 2779
Hin1II	CATG	9 cut(s)	145, 181, 887, 1520, 2219, 2364, 2419, 2497, 2590
Hin6I	GCGC	7 cut(s)	50, 881, 947, 1382, 1499, 1629, 2777
HinP1I	GCGC	7 cut(s)	50, 881, 947, 1382, 1499, 1629, 2777
HincII	GTYRAC	1 cut(s)	600
HindII	GTYRAC	1 cut(s)	600
HphI	GGTGA	6 cut(s)	643, 2127, 2432, 2483, 2703, 2828
Hpy166II	GTNNAC	3 cut(s)	600, 634, 954
Hpy8I	GTNNAC	3 cut(s)	600, 634, 954
Hpy99I	CGWCG	2 cut(s)	595, 617
HpyAV	CCTTC	4 cut(s)	63, 374, 1279, 2156
HpyCH4III	ACNGT	7 cut(s)	794, 859, 908, 1165, 1181, 1270, 1708
HpyCH4IV	ACGT	5 cut(s)	11, 329, 615, 1690, 2554
HpyF10VI	GCNNNNNNNGC	6 cut(s)	617, 1679, 1761, 2051, 2379, 2744
HpyF3I	CTNAG	7 cut(s)	27, 46, 59, 224, 1732, 2277, 2565
HpySE526I	ACGT	5 cut(s)	11, 329, 615, 1690, 2554
Hsp92II	CATG	9 cut(s)	145, 181, 887, 1520, 2219, 2364, 2419, 2497, 2590
HspAI	GCGC	7 cut(s)	50, 881, 947, 1382, 1499, 1629, 2777
Kpn2I	TCCGGA	2 cut(s)	14, 2149
Ksp22I	TGATCA	1 cut(s)	1714
Kzo9I	GATC	5 cut(s)	107, 1621, 1714, 2296, 2581
LmnI	GCTCC	7 cut(s)	170, 398, 512, 838, 1141, 1639, 2617
Lsp1109I	GCAGC	5 cut(s)	638, 1140, 1483, 2042, 2672
LweI	GCATC	4 cut(s)	1651, 2309, 2599, 2809
MabI	ACCWGGT	1 cut(s)	2713
MaeI	CTAG	5 cut(s)	303, 1062, 1458, 1809, 2424
MaeII	ACGT	5 cut(s)	11, 329, 615, 1690, 2554
MalI	GATC	5 cut(s)	109, 1623, 1716, 2298, 2583
MboI	GATC	5 cut(s)	107, 1621, 1714, 2296, 2581
MflI	RGATCY	2 cut(s)	107, 2581
MhlI	GDGCHC	6 cut(s)	177, 423, 967, 1126, 1675, 2560
MlyI	GAGTC	5 cut(s)	1052, 1589, 1943, 2095, 2234
MmeI	TCCRAC	3 cut(s)	813, 1804, 2716
MroI	TCCGGA	2 cut(s)	14, 2149
MseI	TTAA	5 cut(s)	1911, 1941, 1968, 2067, 2436
MslI	CAYNNNNRTG	3 cut(s)	132, 411, 2262
MspA1I	CMGCKG	1 cut(s)	2663
MspCI	CTTAAG	1 cut(s)	1910
Mva1269I	GAATGC	1 cut(s)	2740
MvaI	CCWGG	3 cut(s)	1761, 2019, 2715
MvnI	CGCG	4 cut(s)	898, 1025, 1384, 1390
MwoI	GCNNNNNNNGC	6 cut(s)	617, 1679, 1761, 2051, 2379, 2744
NciI	CCSGG	7 cut(s)	437, 1072, 1140, 1141, 1150, 1171, 1443
NcoI	CCATGG	1 cut(s)	2586
NdeI	CATATG	1 cut(s)	412
NdeII	GATC	5 cut(s)	107, 1621, 1714, 2296, 2581
NlaIII	CATG	9 cut(s)	145, 181, 887, 1520, 2219, 2364, 2419, 2497, 2590
NlaIV	GGNNCC	5 cut(s)	834, 1137, 1153, 2583, 2592
NmuCI	GTSAC	6 cut(s)	67, 321, 925, 975, 1055, 2186
NsbI	TGCGCA	2 cut(s)	882, 1500
NspI	RCATGY	2 cut(s)	887, 2219
NspV	TTCGAA	1 cut(s)	1299
PaeI	GCATGC	1 cut(s)	887
PaeR7I	CTCGAG	1 cut(s)	422
PagI	TCATGA	1 cut(s)	177
PceI	AGGCCT	2 cut(s)	2349, 2637
PciI	ACATGT	1 cut(s)	2215
PcsI	WCGNNNNNNNCGW	2 cut(s)	621, 1752
PctI	GAATGC	1 cut(s)	2740
PfeI	GAWTC	9 cut(s)	191, 212, 403, 427, 440, 668, 728, 1186, 1827
PflFI	GACNNNGTC	1 cut(s)	1789
PflMI	CCANNNNNTGG	1 cut(s)	1996
PfoI	TCCNGGA	2 cut(s)	435, 2017
PinAI	ACCGGT	2 cut(s)	636, 841
PkrI	GCNGC	7 cut(s)	653, 718, 893, 1130, 1498, 2032, 2662
PleI	GAGTC	5 cut(s)	1052, 1589, 1943, 2094, 2234
PpsI	GAGTC	5 cut(s)	1052, 1589, 1943, 2094, 2234
PpuMI	RGGWCCY	1 cut(s)	2681
PscI	ACATGT	1 cut(s)	2215
PshAI	GACNNNNGTC	1 cut(s)	2216
Psp124BI	GAGCTC	3 cut(s)	177, 423, 1675
Psp5II	RGGWCCY	1 cut(s)	2681
Psp6I	CCWGG	3 cut(s)	1759, 2017, 2713
PspFI	CCCAGC	3 cut(s)	1625, 2594, 2625
PspGI	CCWGG	3 cut(s)	1759, 2017, 2713
PspN4I	GGNNCC	5 cut(s)	834, 1137, 1153, 2583, 2592
PspPI	GGNCC	6 cut(s)	4, 609, 786, 1152, 2590, 2681
PspPPI	RGGWCCY	1 cut(s)	2681
PsrI	GAACNNNNNNTAC	2 cut(s)	2337, 2369
PstI	CTGCAG	1 cut(s)	2461
PstNI	CAGNNNCTG	1 cut(s)	2720
PsuI	RGATCY	2 cut(s)	107, 2581
PsyI	GACNNNGTC	1 cut(s)	1789
PvuII	CAGCTG	1 cut(s)	2663
RsaI	GTAC	5 cut(s)	905, 1162, 1758, 1801, 2414
RsaNI	GTAC	5 cut(s)	904, 1161, 1757, 1800, 2413
RseI	CAYNNNNRTG	3 cut(s)	132, 411, 2262
SacI	GAGCTC	3 cut(s)	177, 423, 1675
SaqAI	TTAA	5 cut(s)	1911, 1941, 1968, 2067, 2436
SatI	GCNGC	7 cut(s)	652, 717, 892, 1129, 1497, 2031, 2661
Sau3AI	GATC	5 cut(s)	107, 1621, 1714, 2296, 2581
Sau96I	GGNCC	6 cut(s)	4, 609, 786, 1152, 2590, 2681
ScaI	AGTACT	1 cut(s)	1801
SchI	GAGTC	5 cut(s)	1052, 1589, 1943, 2095, 2234
SduI	GDGCHC	6 cut(s)	177, 423, 967, 1126, 1675, 2560
SexAI	ACCWGGT	1 cut(s)	2713
SfaNI	GCATC	4 cut(s)	1651, 2309, 2599, 2809
SfcI	CTRYAG	2 cut(s)	2457, 2676
Sfr274I	CTCGAG	1 cut(s)	422
SfuI	TTCGAA	1 cut(s)	1299
SinI	GGWCC	5 cut(s)	4, 786, 1152, 2590, 2681
SlaI	CTCGAG	1 cut(s)	422
SmaI	CCCGGG	1 cut(s)	1141
SmiMI	CAYNNNNRTG	3 cut(s)	132, 411, 2262
SmlI	CTYRAG	6 cut(s)	422, 452, 1586, 1634, 1910, 2725
SmoI	CTYRAG	6 cut(s)	422, 452, 1586, 1634, 1910, 2725
SpeI	ACTAGT	1 cut(s)	1457
SphI	GCATGC	1 cut(s)	887
SseBI	AGGCCT	2 cut(s)	2349, 2637
SspI	AATATT	1 cut(s)	646
SspMI	CTAG	5 cut(s)	303, 1062, 1458, 1809, 2424
SstI	GAGCTC	3 cut(s)	177, 423, 1675
StuI	AGGCCT	2 cut(s)	2349, 2637
StyI	CCWWGG	4 cut(s)	732, 782, 1808, 2586
TaaI	ACNGT	7 cut(s)	794, 859, 908, 1165, 1181, 1270, 1708
TaiI	ACGT	5 cut(s)	14, 332, 618, 1693, 2557
TaqII	GACCGA	1 cut(s)	21
TatI	WGTACW	2 cut(s)	1799, 2412
TauI	GCSGC	2 cut(s)	719, 894
TfiI	GAWTC	9 cut(s)	191, 212, 403, 427, 440, 668, 728, 1186, 1827
Tru1I	TTAA	5 cut(s)	1911, 1941, 1968, 2067, 2436
Tru9I	TTAA	5 cut(s)	1911, 1941, 1968, 2067, 2436
TscAI	CASTG	2 cut(s)	1473, 2677
TseFI	GTSAC	6 cut(s)	67, 321, 925, 975, 1055, 2186
TseI	GCWGC	5 cut(s)	651, 1128, 1496, 2030, 2660
Tsp45I	GTSAC	6 cut(s)	67, 321, 925, 975, 1055, 2186
TspDTI	ATGAA	9 cut(s)	194, 1533, 1848, 1862, 2190, 2222, 2246, 2280, 2589
TspGWI	ACGGA	3 cut(s)	120, 340, 815
TspMI	CCCGGG	1 cut(s)	1139
TspRI	CASTG	2 cut(s)	1473, 2677
Tth111I	GACNNNGTC	1 cut(s)	1789
Van91I	CCANNNNNTGG	1 cut(s)	1996
Vha464I	CTTAAG	1 cut(s)	1910
VpaK11BI	GGWCC	5 cut(s)	4, 786, 1152, 2590, 2681
XapI	RAATTY	3 cut(s)	1813, 2388, 2431
XceI	RCATGY	2 cut(s)	887, 2219
XcmI	CCANNNNNNNNNTGG	2 cut(s)	780, 2473
XhoI	CTCGAG	1 cut(s)	422
XmaI	CCCGGG	1 cut(s)	1139
XmaJI	CCTAGG	1 cut(s)	1808
XspI	CTAG	5 cut(s)	303, 1062, 1458, 1809, 2424
ZrmI	AGTACT	1 cut(s)	1801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.