Rorug03G0266800

WW domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0002830
Physical Location & Seq
Forward (+)
26191696 .. 26197593
5898 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0266800.1

Sequence Viewer

Length: 1566 bp
ATGGCTGCGGGCGTCAAGATAGGAGGAACCGCCATCGGCAACGGCACCGTTCCGACTCACCGAGTCACCATGTCCGCAGCTCTCCCTCTCCCTCACACTCTCTTCTTCCTCCGCACACTCCCCTCCCGCCCCCGCGCCCTCCGCTCCACTCGCTCCCACTCTCTCCCCCTCCGAGCTTCCTCCTCCGACTCTCCTCCAACTTCTTCTTCTCCTCCTCCAGGGCGAGAGGTGGAGAATGTGGTGATTATCGGTTCAGGACCGGCGGGATTCACAGCGGCAATCTACGCAGCTCGAGCGAATTTGAAGCCTCTGGTGTTTGAGGGATACCAGGCAGGTCCGGGTGGACAGTTGATGACGACTACTGAAGTCGAGAACTTCCCTGGATTCCCTGAAGGAATCACTGGTCCTGATTTGATGGACAGGATGCGGCGGCAGGCGGAGCGGTGGGGAGCAGAGTTGTACCAGGAAGATGTTGAGTCTATTGACGTCAGAACTAGGCCCTTTACTGTCCAAAGCAGTGACCGTAAGGTTAAGTGCAACAGCCTAATTTTTGCCACAGGGGCTACTGCAAGACGTCTCAGGATACCCCGAGAAGATGAATTTTGGAGTAGGGGAATTAGTGCTTGTGCAATATGTGATGGAGCGTCACCACTGTTTAAAGGCCAAGTGCTTGCTGTTGTAGGAGGGGGTGATACAGCCACAGAGGAAGCTTTGTACCTTACCAAATATGCTCGACATGTTCACTTACTTGTACGTAGAGATCAAATGAGGGCTTCTAGAGCCATGCAAGATAGAGTGTACAACAACCCAAATATTACCGTGCACTTCAACACAGAGACTGTGGACATTGTTAGCAATACAAAGGGCCAGATGTCTGGAGTATTAATTCGGAACCTTGATACTAAGGAGGAATCTGTGATTGAAGCCAAGGGGTTATTTTATGGTATAGGCCATTCACCAAATAGCCAATTGTTGGAAGGTCAGGTTGAGCTTGACAGTTCTGGCTATGTCTTAGTAGAGGAGGGTACTTCAAAGACTTCAGTTGAAGGTGTATTTGCTGCTGGAGATGTACAGGATCATGAATGGAGGCAAGCTGTAACTGCTGCAGGTTCTGGATGCATTGCTGCATTATCAGTTGAGAGATATCTTGTGGGCAAAAATCTCATTATTGAGTTTCACCAGCCCCAAACTGAAGAGGCTAAGAAGGAACTCACAGACAGGGATGTTCAAGAACATTTTGACATTACAATTACAAAGCATAAGGGCCAGTATGCCCTGCGAAAATTGTACCACGAAAGTCCAAGGCTTATATGTGTACTATATACAGCACCAACATGTGGTCCATGCAGGACATTGAAACCAATCCTTAGTAAGGTGATAGATGACTTTGACAAAAATGTACATTTCGTTGAAATTGATATTGAGGAAGATCAAGAAATAGCTGAGGCTGCCGGAATTATGGGTACACCGTGTGTTCAGTTTTTCAAAAACAAGGAGATGATCAGGACTCTATCGGGGGTCAAGATGAAGAGCGAGTATAGAGATTTCATTGAAGCAAATAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000380 GO:0000398 GO:0001817 GO:0001819 GO:0002218 GO:0002230 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0002697 GO:0002831 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006355 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0014070 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0022008 GO:0030030 GO:0030154 GO:0030182 GO:0031175 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0032101 GO:0032479 GO:0032481 GO:0032501 GO:0032502 GO:0034641 GO:0042221 GO:0043021 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043330 GO:0043331 GO:0043484 GO:0043900 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045088 GO:0045089 GO:0045935 GO:0046483 GO:0048468 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050688 GO:0050691 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071359 GO:0071360 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0097159 GO:0098542 GO:0120036 GO:0140110 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
WW

Protein Analysis

521

Amino Acids

57.29

Weight (kDa)

6.39

Isoelectric Point (pI)

45.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 79 - 372 1.3e-50 Pyridine nucleotide-disulphide oxidoreductase
FAD_binding_2 PF00890 80 - 311 5.7e-06 FAD binding domain
Pyr_redox_3 PF13738 154 - 355 5e-17 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 224 - 297 3.2e-14 Pyridine nucleotide-disulphide oxidoreductase
Thioredoxin PF00085 433 - 518 5.8e-16 Thioredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 489, 577
Acc36I ACCTGC 2 cut(s) 323, 1097
AccB1I GGYRCC 1 cut(s) 44
AccB7I CCANNNNNTGG 2 cut(s) 973, 1337
AccBSI CCGCTC 2 cut(s) 144, 442
AccII CGCG 1 cut(s) 135
AclWI GGATC 1 cut(s) 1083
AcsI RAATTY 2 cut(s) 298, 599
AcuI CTGAAG 4 cut(s) 384, 411, 1023, 1212
AcyI GRCGYC 3 cut(s) 12, 486, 574
AdeI CACNNNGTG 1 cut(s) 1472
AfiI CCNNNNNNNGG 4 cut(s) 218, 973, 1337, 1372
AflIII ACRYGT 2 cut(s) 736, 1334
AjnI CCWGG 4 cut(s) 217, 327, 379, 462
AjuI GAANNNNNNNTTGG 2 cut(s) 190, 222
AluBI AGCT 7 cut(s) 80, 176, 290, 710, 991, 1094, 1442
AluI AGCT 7 cut(s) 80, 176, 290, 710, 991, 1094, 1442
Alw21I GWGCWC 1 cut(s) 825
Alw26I GTCTC 2 cut(s) 581, 830
Alw44I GTGCAC 1 cut(s) 821
AlwI GGATC 1 cut(s) 1083
AlwNI CAGNNNCTG 2 cut(s) 839, 1112
Ama87I CYCGRG 2 cut(s) 291, 588
AoxI GGCC 5 cut(s) 497, 661, 865, 949, 1264
ApaLI GTGCAC 1 cut(s) 821
ApeKI GCWGC 7 cut(s) 5, 77, 287, 1058, 1103, 1124, 1448
ApoI RAATTY 2 cut(s) 298, 599
AseI ATTAAT 1 cut(s) 884
AspLEI GCGC 1 cut(s) 137
AspS9I GGNCC 7 cut(s) 257, 335, 404, 498, 865, 1264, 1340
AsuC2I CCSGG 1 cut(s) 339
AsuHPI GGTGA 8 cut(s) 50, 58, 253, 639, 701, 948, 1169, 1387
AvaI CYCGRG 2 cut(s) 291, 588
AvaII GGWCC 4 cut(s) 257, 335, 404, 1340
BaeGI GKGCMC 1 cut(s) 825
BanI GGYRCC 1 cut(s) 44
Bbv12I GWGCWC 1 cut(s) 825
BbvCI CCTCAGC 1 cut(s) 1443
BbvI GCAGC 6 cut(s) 89, 299, 1045, 1090, 1111, 1435
BccI CCATC 3 cut(s) 41, 409, 632
BceAI ACGGC 1 cut(s) 58
BciT130I CCWGG 4 cut(s) 219, 329, 381, 464
BciVI GTATCC 2 cut(s) 317, 576
BclI TGATCA 1 cut(s) 1500
BcnI CCSGG 1 cut(s) 339
BcoDI GTCTC 2 cut(s) 581, 830
BfaI CTAG 2 cut(s) 495, 777
BfmI CTRYAG 1 cut(s) 1104
BfuAI ACCTGC 2 cut(s) 323, 1097
BfuI GTATCC 2 cut(s) 317, 576
BglI GCCNNNNNGGC 1 cut(s) 560
Bme1390I CCNGG 5 cut(s) 219, 329, 339, 381, 464
Bme18I GGWCC 4 cut(s) 257, 335, 404, 1340
BmeT110I CYCGRG 2 cut(s) 291, 588
BmgT120I GGNCC 7 cut(s) 257, 335, 404, 498, 865, 1264, 1340
BmiI GGNNCC 3 cut(s) 28, 46, 893
BmrFI CCNGG 5 cut(s) 219, 329, 339, 381, 464
BmsI GCATC 2 cut(s) 414, 1106
BpmI CTGGAG 3 cut(s) 201, 897, 1083
Bpu10I CCTNAGC 1 cut(s) 1443
BpuMI CCSGG 1 cut(s) 339
BsaAI YACGTR 1 cut(s) 755
BsaHI GRCGYC 3 cut(s) 12, 486, 574
BsaJI CCNNGG 4 cut(s) 218, 379, 927, 1301
Bsc4I CCNNNNNNNGG 4 cut(s) 218, 973, 1337, 1372
Bse118I RCCGGY 1 cut(s) 259
Bse1I ACTGG 2 cut(s) 406, 1267
Bse3DI GCAATG 1 cut(s) 1119
BseBI CCWGG 4 cut(s) 219, 329, 381, 464
BseDI CCNNGG 4 cut(s) 218, 379, 927, 1301
BseGI GGATG 3 cut(s) 429, 1121, 1228
BseLI CCNNNNNNNGG 4 cut(s) 218, 973, 1337, 1372
BseMI GCAATG 1 cut(s) 1119
BseMII CTCAG 2 cut(s) 592, 1434
BseNI ACTGG 2 cut(s) 406, 1267
BseRI GAGGAG 5 cut(s) 172, 183, 201, 204, 1034
BseSI GKGCMC 1 cut(s) 825
BseXI GCAGC 6 cut(s) 89, 299, 1045, 1090, 1111, 1435
Bsh1236I CGCG 1 cut(s) 135
BshFI GGCC 5 cut(s) 499, 663, 867, 951, 1266
BshNI GGYRCC 1 cut(s) 44
BsiHKAI GWGCWC 1 cut(s) 825
BsiHKCI CYCGRG 2 cut(s) 291, 588
BsiSI CCGG 3 cut(s) 260, 338, 1452
BslI CCNNNNNNNGG 4 cut(s) 218, 973, 1337, 1372
BsmAI GTCTC 2 cut(s) 581, 830
BsmBI CGTCTC 1 cut(s) 581
BsnI GGCC 5 cut(s) 499, 663, 867, 951, 1266
BsoBI CYCGRG 2 cut(s) 291, 588
Bsp1286I GDGCHC 1 cut(s) 825
Bsp1407I TGTACA 3 cut(s) 798, 1069, 1399
Bsp143I GATC 4 cut(s) 760, 1075, 1429, 1500
BspANI GGCC 5 cut(s) 499, 663, 867, 951, 1266
BspCNI CTCAG 2 cut(s) 591, 1435
BspFNI CGCG 1 cut(s) 135
BspHI TCATGA 1 cut(s) 1078
BspLI GGNNCC 3 cut(s) 28, 46, 893
BspMAI CTGCAG 1 cut(s) 1108
BspMI ACCTGC 2 cut(s) 323, 1097
BspPI GGATC 1 cut(s) 1083
BspQI GCTCTTC 1 cut(s) 1523
BspT107I GGYRCC 1 cut(s) 44
BsrBI CCGCTC 2 cut(s) 144, 442
BsrDI GCAATG 1 cut(s) 1119
BsrFI RCCGGY 1 cut(s) 259
BsrGI TGTACA 3 cut(s) 798, 1069, 1399
BsrI ACTGG 2 cut(s) 406, 1267
BssAI RCCGGY 1 cut(s) 259
BssECI CCNNGG 4 cut(s) 218, 379, 927, 1301
BssMI GATC 4 cut(s) 760, 1075, 1429, 1500
BssNI GRCGYC 3 cut(s) 12, 486, 574
BssT1I CCWWGG 2 cut(s) 927, 1301
Bst2UI CCWGG 4 cut(s) 219, 329, 381, 464
Bst4CI ACNGT 9 cut(s) 49, 348, 508, 524, 654, 820, 841, 998, 1470
Bst6I CTCTTC 3 cut(s) 107, 1188, 1523
BstACI GRCGYC 3 cut(s) 12, 486, 574
BstAUI TGTACA 3 cut(s) 798, 1069, 1399
BstBAI YACGTR 1 cut(s) 755
BstC8I GCNNGC 4 cut(s) 10, 435, 672, 1092
BstDEI CTNAG 6 cut(s) 578, 903, 1012, 1200, 1367, 1443
BstENI CCTNNNNNAGG 2 cut(s) 216, 1370
BstF5I GGATG 3 cut(s) 429, 1121, 1228
BstFNI CGCG 1 cut(s) 135
BstHHI GCGC 1 cut(s) 137
BstKTI GATC 4 cut(s) 763, 1078, 1432, 1503
BstMAI GTCTC 2 cut(s) 581, 830
BstMBI GATC 4 cut(s) 760, 1075, 1429, 1500
BstMWI GCNNNNNNNGC 9 cut(s) 141, 150, 284, 293, 439, 560, 779, 1100, 1448
BstNI CCWGG 4 cut(s) 219, 329, 381, 464
BstNSI RCATGY 2 cut(s) 740, 1338
BstSCI CCNGG 5 cut(s) 217, 327, 337, 379, 462
BstSFI CTRYAG 1 cut(s) 1104
BstSLI GKGCMC 1 cut(s) 825
BstSNI TACGTA 1 cut(s) 755
BstUI CGCG 1 cut(s) 135
BstV1I GCAGC 6 cut(s) 89, 299, 1045, 1090, 1111, 1435
BstXI CCANNNNNNTGG 1 cut(s) 875
BsuI GTATCC 2 cut(s) 317, 576
BsuRI GGCC 5 cut(s) 499, 663, 867, 951, 1266
BtsCI GGATG 3 cut(s) 429, 1121, 1228
BtsI GCAGTG 1 cut(s) 523
BtsIMutI CAGTG 3 cut(s) 399, 523, 650
BveI ACCTGC 2 cut(s) 323, 1097
Cac8I GCNNGC 4 cut(s) 10, 435, 672, 1092
CaiI CAGNNNCTG 2 cut(s) 839, 1112
CciI TCATGA 1 cut(s) 1078
CfoI GCGC 1 cut(s) 137
Cfr10I RCCGGY 1 cut(s) 259
Cfr13I GGNCC 7 cut(s) 257, 335, 404, 498, 865, 1264, 1340
CseI GACGC 1 cut(s) 633
CviAII CATG 6 cut(s) 70, 737, 784, 1079, 1335, 1344
DdeI CTNAG 6 cut(s) 578, 903, 1012, 1200, 1367, 1443
DpnI GATC 4 cut(s) 762, 1077, 1431, 1502
DpnII GATC 4 cut(s) 760, 1075, 1429, 1500
DraI TTTAAA 1 cut(s) 658
DraIII CACNNNGTG 1 cut(s) 1472
Eam1104I CTCTTC 3 cut(s) 107, 1188, 1523
EarI CTCTTC 3 cut(s) 107, 1188, 1523
EciI GGCGGA 1 cut(s) 452
Eco105I TACGTA 1 cut(s) 755
Eco130I CCWWGG 2 cut(s) 927, 1301
Eco32I GATATC 1 cut(s) 1145
Eco47I GGWCC 4 cut(s) 257, 335, 404, 1340
Eco57I CTGAAG 4 cut(s) 384, 411, 1023, 1212
Eco88I CYCGRG 2 cut(s) 291, 588
EcoNI CCTNNNNNAGG 2 cut(s) 216, 1370
EcoO109I RGGNCCY 1 cut(s) 498
EcoRII CCWGG 4 cut(s) 217, 327, 379, 462
EcoRV GATATC 1 cut(s) 1145
EcoT14I CCWWGG 2 cut(s) 927, 1301
EcoT22I ATGCAT 1 cut(s) 1121
ErhI CCWWGG 2 cut(s) 927, 1301
Esp3I CGTCTC 1 cut(s) 581
FaeI CATG 6 cut(s) 73, 740, 787, 1082, 1338, 1347
FatI CATG 6 cut(s) 69, 736, 783, 1078, 1334, 1343
FauI CCCGC 3 cut(s) 134, 140, 256
FbaI TGATCA 1 cut(s) 1500
FokI GGATG 3 cut(s) 436, 1128, 1235
FspBI CTAG 2 cut(s) 495, 777
GlaI GCGC 1 cut(s) 136
GsuI CTGGAG 3 cut(s) 201, 897, 1083
HaeIII GGCC 5 cut(s) 499, 663, 867, 951, 1266
HapII CCGG 3 cut(s) 260, 338, 1452
HgaI GACGC 1 cut(s) 633
HhaI GCGC 1 cut(s) 137
Hin1I GRCGYC 3 cut(s) 12, 486, 574
Hin1II CATG 6 cut(s) 73, 740, 787, 1082, 1338, 1347
Hin6I GCGC 1 cut(s) 135
HinP1I GCGC 1 cut(s) 135
HindIII AAGCTT 1 cut(s) 708
HinfI GANTC 9 cut(s) 55, 63, 188, 267, 384, 396, 476, 911, 1507
HpaII CCGG 3 cut(s) 260, 338, 1452
HphI GGTGA 8 cut(s) 50, 58, 253, 639, 701, 948, 1169, 1387
Hpy166II GTNNAC 7 cut(s) 344, 742, 799, 823, 844, 1316, 1466
Hpy188I TCNGA 5 cut(s) 54, 173, 187, 491, 891
Hpy8I GTNNAC 7 cut(s) 344, 742, 799, 823, 844, 1316, 1466
HpyAV CCTTC 4 cut(s) 386, 971, 1040, 1198
HpyCH4III ACNGT 9 cut(s) 49, 348, 508, 524, 654, 820, 841, 998, 1470
HpyCH4IV ACGT 3 cut(s) 486, 574, 754
HpyCH4V TGCA 9 cut(s) 537, 569, 629, 787, 823, 1106, 1119, 1127, 1347
HpyF10VI GCNNNNNNNGC 9 cut(s) 141, 150, 284, 293, 439, 560, 779, 1100, 1448
HpyF3I CTNAG 6 cut(s) 578, 903, 1012, 1200, 1367, 1443
HpySE526I ACGT 3 cut(s) 486, 574, 754
Hsp92I GRCGYC 3 cut(s) 12, 486, 574
Hsp92II CATG 6 cut(s) 73, 740, 787, 1082, 1338, 1347
HspAI GCGC 1 cut(s) 135
Ksp22I TGATCA 1 cut(s) 1500
Kzo9I GATC 4 cut(s) 760, 1075, 1429, 1500
LguI GCTCTTC 1 cut(s) 1523
LmnI GCTCC 5 cut(s) 149, 158, 439, 449, 641
Lsp1109I GCAGC 6 cut(s) 89, 299, 1045, 1090, 1111, 1435
LweI GCATC 2 cut(s) 414, 1106
MaeI CTAG 2 cut(s) 495, 777
MaeII ACGT 3 cut(s) 486, 574, 754
MaeIII GTNAC 4 cut(s) 64, 518, 645, 1096
MalI GATC 4 cut(s) 762, 1077, 1431, 1502
MbiI CCGCTC 2 cut(s) 144, 442
MboI GATC 4 cut(s) 760, 1075, 1429, 1500
MboII GAAGA 9 cut(s) 94, 97, 195, 198, 479, 605, 1205, 1439, 1540
MfeI CAATTG 1 cut(s) 968
MhlI GDGCHC 1 cut(s) 825
MlyI GAGTC 5 cut(s) 49, 72, 182, 485, 1501
MmeI TCCRAC 4 cut(s) 77, 210, 221, 954
Mph1103I ATGCAT 1 cut(s) 1121
MseI TTAA 3 cut(s) 531, 657, 884
MslI CAYNNNNRTG 1 cut(s) 1333
MspA1I CMGCKG 1 cut(s) 275
MspI CCGG 3 cut(s) 260, 338, 1452
MspR9I CCNGG 5 cut(s) 219, 329, 339, 381, 464
MunI CAATTG 1 cut(s) 968
MvaI CCWGG 4 cut(s) 219, 329, 381, 464
MvnI CGCG 1 cut(s) 135
MwoI GCNNNNNNNGC 9 cut(s) 141, 150, 284, 293, 439, 560, 779, 1100, 1448
NciI CCSGG 1 cut(s) 339
NdeII GATC 4 cut(s) 760, 1075, 1429, 1500
NlaIII CATG 6 cut(s) 73, 740, 787, 1082, 1338, 1347
NlaIV GGNNCC 3 cut(s) 28, 46, 893
NmuCI GTSAC 3 cut(s) 64, 518, 645
NsiI ATGCAT 1 cut(s) 1121
NspI RCATGY 2 cut(s) 740, 1338
PaeR7I CTCGAG 1 cut(s) 291
PagI TCATGA 1 cut(s) 1078
PciI ACATGT 2 cut(s) 736, 1334
PciSI GCTCTTC 1 cut(s) 1523
PfeI GAWTC 4 cut(s) 267, 384, 396, 911
PflMI CCANNNNNTGG 2 cut(s) 973, 1337
PleI GAGTC 5 cut(s) 49, 71, 182, 484, 1501
PpsI GAGTC 5 cut(s) 49, 71, 182, 484, 1501
Ppu21I YACGTR 1 cut(s) 755
PscI ACATGT 2 cut(s) 736, 1334
PshBI ATTAAT 1 cut(s) 884
Psp6I CCWGG 4 cut(s) 217, 327, 379, 462
PspGI CCWGG 4 cut(s) 217, 327, 379, 462
PspN4I GGNNCC 3 cut(s) 28, 46, 893
PspPI GGNCC 7 cut(s) 257, 335, 404, 498, 865, 1264, 1340
PspXI VCTCGAGB 1 cut(s) 291
PstI CTGCAG 1 cut(s) 1108
PstNI CAGNNNCTG 2 cut(s) 839, 1112
RseI CAYNNNNRTG 1 cut(s) 1333
SapI GCTCTTC 1 cut(s) 1523
SaqAI TTAA 3 cut(s) 531, 657, 884
Sau3AI GATC 4 cut(s) 760, 1075, 1429, 1500
Sau96I GGNCC 7 cut(s) 257, 335, 404, 498, 865, 1264, 1340
SchI GAGTC 5 cut(s) 49, 72, 182, 485, 1501
ScrFI CCNGG 5 cut(s) 219, 329, 339, 381, 464
SduI GDGCHC 1 cut(s) 825
SfaNI GCATC 2 cut(s) 414, 1106
SfcI CTRYAG 1 cut(s) 1104
Sfr274I CTCGAG 1 cut(s) 291
SinI GGWCC 4 cut(s) 257, 335, 404, 1340
SlaI CTCGAG 1 cut(s) 291
SmiMI CAYNNNNRTG 1 cut(s) 1333
SmlI CTYRAG 1 cut(s) 291
SmoI CTYRAG 1 cut(s) 291
SnaBI TACGTA 1 cut(s) 755
SspI AATATT 1 cut(s) 814
SspMI CTAG 2 cut(s) 495, 777
StyD4I CCNGG 5 cut(s) 217, 327, 337, 379, 462
StyI CCWWGG 2 cut(s) 927, 1301
TaaI ACNGT 9 cut(s) 49, 348, 508, 524, 654, 820, 841, 998, 1470
TaiI ACGT 3 cut(s) 489, 577, 757
TaqI TCGA 3 cut(s) 292, 369, 733
TatI WGTACW 4 cut(s) 798, 1069, 1315, 1399
TauI GCSGC 3 cut(s) 278, 430, 433
TfiI GAWTC 4 cut(s) 267, 384, 396, 911
Tru1I TTAA 3 cut(s) 531, 657, 884
Tru9I TTAA 3 cut(s) 531, 657, 884
TscAI CASTG 3 cut(s) 406, 523, 657
TseFI GTSAC 3 cut(s) 64, 518, 645
TseI GCWGC 7 cut(s) 5, 77, 287, 1058, 1103, 1124, 1448
Tsp45I GTSAC 3 cut(s) 64, 518, 645
TspDTI ATGAA 4 cut(s) 612, 1095, 1537, 1541
TspRI CASTG 3 cut(s) 406, 523, 657
Van91I CCANNNNNTGG 2 cut(s) 973, 1337
VneI GTGCAC 1 cut(s) 821
VpaK11BI GGWCC 4 cut(s) 257, 335, 404, 1340
VspI ATTAAT 1 cut(s) 884
XagI CCTNNNNNAGG 2 cut(s) 216, 1370
XapI RAATTY 2 cut(s) 298, 599
XbaI TCTAGA 1 cut(s) 776
XceI RCATGY 2 cut(s) 740, 1338
XhoI CTCGAG 1 cut(s) 291
XspI CTAG 2 cut(s) 495, 777
ZraI GACGTC 2 cut(s) 487, 575
Zsp2I ATGCAT 1 cut(s) 1121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.