AT-rich interactive domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000023193 RLG00000023203 |
| rosa_multiflora | Rmu_sc0006653.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00397400 Rroxscaffold_6G00397420 |
| rosa_rugosa | Rorug03G0210700 |
| rosa_samantha | Rh2AG350100 Rh3BG299300 Rh3BG299700 Rh3DG292900 |
| rosa_wichuraiana | Rw3G023570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 975 |
| AclWI | GGATC | 1 cut(s) | 661 |
| AcsI | RAATTY | 5 cut(s) | 221, 247, 687, 762, 959 |
| AfaI | GTAC | 3 cut(s) | 216, 358, 1038 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 776, 975 |
| AflII | CTTAAG | 1 cut(s) | 280 |
| AgsI | TTSAA | 8 cut(s) | 186, 412, 569, 601, 680, 985, 1051, 1142 |
| AjiI | CACGTC | 1 cut(s) | 244 |
| AleI | CACNNNNGTG | 2 cut(s) | 519, 885 |
| AluBI | AGCT | 6 cut(s) | 287, 421, 551, 683, 1054, 1151 |
| AluI | AGCT | 6 cut(s) | 287, 421, 551, 683, 1054, 1151 |
| Alw26I | GTCTC | 1 cut(s) | 791 |
| AlwI | GGATC | 1 cut(s) | 661 |
| Ama87I | CYCGRG | 2 cut(s) | 606, 1072 |
| AoxI | GGCC | 2 cut(s) | 668, 767 |
| ApoI | RAATTY | 5 cut(s) | 221, 247, 687, 762, 959 |
| AspS9I | GGNCC | 4 cut(s) | 668, 709, 768, 978 |
| AsuC2I | CCSGG | 2 cut(s) | 1073, 1074 |
| AsuHPI | GGTGA | 2 cut(s) | 499, 740 |
| AvaI | CYCGRG | 2 cut(s) | 606, 1072 |
| AvaII | GGWCC | 2 cut(s) | 709, 978 |
| AxyI | CCTNAGG | 1 cut(s) | 1124 |
| BccI | CCATC | 4 cut(s) | 121, 741, 779, 946 |
| BclI | TGATCA | 3 cut(s) | 51, 271, 334 |
| BcnI | CCSGG | 2 cut(s) | 1073, 1074 |
| BcoDI | GTCTC | 1 cut(s) | 791 |
| BfaI | CTAG | 6 cut(s) | 38, 288, 500, 672, 821, 1146 |
| BfmI | CTRYAG | 1 cut(s) | 804 |
| BfrI | CTTAAG | 1 cut(s) | 280 |
| BglII | AGATCT | 2 cut(s) | 827, 857 |
| Bme1390I | CCNGG | 2 cut(s) | 1073, 1074 |
| Bme18I | GGWCC | 2 cut(s) | 709, 978 |
| BmeT110I | CYCGRG | 2 cut(s) | 606, 1072 |
| BmgBI | CACGTC | 1 cut(s) | 244 |
| BmgT120I | GGNCC | 4 cut(s) | 668, 709, 768, 978 |
| BmrFI | CCNGG | 2 cut(s) | 1073, 1074 |
| BmsI | GCATC | 1 cut(s) | 855 |
| BpuMI | CCSGG | 2 cut(s) | 1073, 1074 |
| BsaAI | YACGTR | 1 cut(s) | 218 |
| BsaBI | GATNNNNATC | 1 cut(s) | 832 |
| BsaI | GGTCTC | 1 cut(s) | 791 |
| BsaJI | CCNNGG | 2 cut(s) | 649, 1072 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1120, 1150 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 776, 975 |
| Bse21I | CCTNAGG | 1 cut(s) | 1124 |
| Bse8I | GATNNNNATC | 1 cut(s) | 832 |
| BseDI | CCNNGG | 2 cut(s) | 649, 1072 |
| BseGI | GGATG | 2 cut(s) | 374, 1119 |
| BseJI | GATNNNNATC | 1 cut(s) | 832 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 776, 975 |
| BseRI | GAGGAG | 1 cut(s) | 1030 |
| BshFI | GGCC | 2 cut(s) | 670, 769 |
| BsiHKCI | CYCGRG | 2 cut(s) | 606, 1072 |
| BsiSI | CCGG | 1 cut(s) | 1073 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 776, 975 |
| BsmAI | GTCTC | 1 cut(s) | 791 |
| BsnI | GGCC | 2 cut(s) | 670, 769 |
| Bso31I | GGTCTC | 1 cut(s) | 791 |
| BsoBI | CYCGRG | 2 cut(s) | 606, 1072 |
| Bsp1407I | TGTACA | 1 cut(s) | 356 |
| Bsp143I | GATC | 8 cut(s) | 51, 76, 271, 334, 616, 653, 827, 857 |
| BspANI | GGCC | 2 cut(s) | 670, 769 |
| BspPI | GGATC | 1 cut(s) | 661 |
| BspTI | CTTAAG | 1 cut(s) | 280 |
| BspTNI | GGTCTC | 1 cut(s) | 791 |
| BsrGI | TGTACA | 1 cut(s) | 356 |
| BssECI | CCNNGG | 2 cut(s) | 649, 1072 |
| BssMI | GATC | 8 cut(s) | 51, 76, 271, 334, 616, 653, 827, 857 |
| Bst4CI | ACNGT | 1 cut(s) | 518 |
| Bst6I | CTCTTC | 1 cut(s) | 584 |
| BstAFI | CTTAAG | 1 cut(s) | 280 |
| BstAUI | TGTACA | 1 cut(s) | 356 |
| BstBAI | YACGTR | 1 cut(s) | 218 |
| BstC8I | GCNNGC | 1 cut(s) | 1056 |
| BstDEI | CTNAG | 2 cut(s) | 899, 1124 |
| BstDSI | CCRYGG | 1 cut(s) | 649 |
| BstEII | GGTNACC | 1 cut(s) | 728 |
| BstF5I | GGATG | 2 cut(s) | 374, 1119 |
| BstKTI | GATC | 8 cut(s) | 54, 79, 274, 337, 619, 656, 830, 860 |
| BstMAI | GTCTC | 1 cut(s) | 791 |
| BstMBI | GATC | 8 cut(s) | 51, 76, 271, 334, 616, 653, 827, 857 |
| BstPI | GGTNACC | 1 cut(s) | 728 |
| BstSCI | CCNGG | 2 cut(s) | 1071, 1072 |
| BstSFI | CTRYAG | 1 cut(s) | 804 |
| BstSNI | TACGTA | 1 cut(s) | 218 |
| BstX2I | RGATCY | 3 cut(s) | 653, 827, 857 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 719 |
| BstYI | RGATCY | 3 cut(s) | 653, 827, 857 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1124 |
| BsuRI | GGCC | 2 cut(s) | 670, 769 |
| BtgI | CCRYGG | 1 cut(s) | 649 |
| BtgZI | GCGATG | 1 cut(s) | 283 |
| BtrI | CACGTC | 1 cut(s) | 244 |
| BtsCI | GGATG | 2 cut(s) | 374, 1119 |
| BtsIMutI | CAGTG | 1 cut(s) | 514 |
| Cac8I | GCNNGC | 1 cut(s) | 1056 |
| Cfr13I | GGNCC | 4 cut(s) | 668, 709, 768, 978 |
| Cfr9I | CCCGGG | 1 cut(s) | 1072 |
| Csp6I | GTAC | 3 cut(s) | 215, 357, 1037 |
| CviAII | CATG | 6 cut(s) | 124, 308, 479, 635, 696, 837 |
| CviQI | GTAC | 3 cut(s) | 215, 357, 1037 |
| DdeI | CTNAG | 2 cut(s) | 899, 1124 |
| DpnI | GATC | 8 cut(s) | 53, 78, 273, 336, 618, 655, 829, 859 |
| DpnII | GATC | 8 cut(s) | 51, 76, 271, 334, 616, 653, 827, 857 |
| DraI | TTTAAA | 1 cut(s) | 1003 |
| Eam1104I | CTCTTC | 1 cut(s) | 584 |
| EarI | CTCTTC | 1 cut(s) | 584 |
| Eco105I | TACGTA | 1 cut(s) | 218 |
| Eco31I | GGTCTC | 1 cut(s) | 791 |
| Eco47I | GGWCC | 2 cut(s) | 709, 978 |
| Eco81I | CCTNAGG | 1 cut(s) | 1124 |
| Eco88I | CYCGRG | 2 cut(s) | 606, 1072 |
| Eco91I | GGTNACC | 1 cut(s) | 728 |
| EcoO65I | GGTNACC | 1 cut(s) | 728 |
| EcoRI | GAATTC | 1 cut(s) | 247 |
| FaeI | CATG | 6 cut(s) | 127, 311, 482, 638, 699, 840 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 882, 914 |
| FatI | CATG | 6 cut(s) | 123, 307, 478, 634, 695, 836 |
| FbaI | TGATCA | 3 cut(s) | 51, 271, 334 |
| FokI | GGATG | 2 cut(s) | 361, 1106 |
| FspBI | CTAG | 6 cut(s) | 38, 288, 500, 672, 821, 1146 |
| HaeIII | GGCC | 2 cut(s) | 670, 769 |
| HapII | CCGG | 1 cut(s) | 1073 |
| Hin1II | CATG | 6 cut(s) | 127, 311, 482, 638, 699, 840 |
| HincII | GTYRAC | 1 cut(s) | 8 |
| HindII | GTYRAC | 1 cut(s) | 8 |
| HindIII | AAGCTT | 2 cut(s) | 419, 1052 |
| HinfI | GANTC | 2 cut(s) | 116, 545 |
| HpaII | CCGG | 1 cut(s) | 1073 |
| HphI | GGTGA | 2 cut(s) | 499, 740 |
| Hpy166II | GTNNAC | 4 cut(s) | 8, 266, 712, 978 |
| Hpy188I | TCNGA | 1 cut(s) | 121 |
| Hpy188III | TCNNGA | 3 cut(s) | 29, 444, 608 |
| Hpy8I | GTNNAC | 4 cut(s) | 8, 266, 712, 978 |
| HpyAV | CCTTC | 1 cut(s) | 595 |
| HpyCH4III | ACNGT | 1 cut(s) | 518 |
| HpyCH4IV | ACGT | 3 cut(s) | 217, 243, 365 |
| HpyCH4V | TGCA | 7 cut(s) | 149, 173, 431, 524, 695, 846, 907 |
| HpyF3I | CTNAG | 2 cut(s) | 899, 1124 |
| HpySE526I | ACGT | 3 cut(s) | 217, 243, 365 |
| Hsp92II | CATG | 6 cut(s) | 127, 311, 482, 638, 699, 840 |
| Ksp22I | TGATCA | 3 cut(s) | 51, 271, 334 |
| Kzo9I | GATC | 8 cut(s) | 51, 76, 271, 334, 616, 653, 827, 857 |
| LpnPI | CCDG | 5 cut(s) | 429, 705, 1072, 1086, 1168 |
| LweI | GCATC | 1 cut(s) | 855 |
| MaeI | CTAG | 6 cut(s) | 38, 288, 500, 672, 821, 1146 |
| MaeII | ACGT | 3 cut(s) | 217, 243, 365 |
| MaeIII | GTNAC | 5 cut(s) | 161, 188, 313, 728, 1082 |
| MalI | GATC | 8 cut(s) | 53, 78, 273, 336, 618, 655, 829, 859 |
| MboI | GATC | 8 cut(s) | 51, 76, 271, 334, 616, 653, 827, 857 |
| MboII | GAAGA | 1 cut(s) | 601 |
| MflI | RGATCY | 3 cut(s) | 653, 827, 857 |
| MmeI | TCCRAC | 1 cut(s) | 917 |
| MnlI | CCTC | 2 cut(s) | 976, 1008 |
| MseI | TTAA | 7 cut(s) | 281, 380, 494, 540, 578, 1002, 1062 |
| MslI | CAYNNNNRTG | 4 cut(s) | 128, 519, 717, 885 |
| MspA1I | CMGCKG | 1 cut(s) | 551 |
| MspCI | CTTAAG | 1 cut(s) | 280 |
| MspI | CCGG | 1 cut(s) | 1073 |
| MspR9I | CCNGG | 2 cut(s) | 1073, 1074 |
| NciI | CCSGG | 2 cut(s) | 1073, 1074 |
| NdeII | GATC | 8 cut(s) | 51, 76, 271, 334, 616, 653, 827, 857 |
| NlaIII | CATG | 6 cut(s) | 127, 311, 482, 638, 699, 840 |
| NmuCI | GTSAC | 3 cut(s) | 161, 728, 1082 |
| OliI | CACNNNNGTG | 2 cut(s) | 519, 885 |
| PaeR7I | CTCGAG | 1 cut(s) | 606 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 214 |
| PfeI | GAWTC | 2 cut(s) | 116, 545 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 975 |
| Ppu21I | YACGTR | 1 cut(s) | 218 |
| PspEI | GGTNACC | 1 cut(s) | 728 |
| PspPI | GGNCC | 4 cut(s) | 668, 709, 768, 978 |
| PsuI | RGATCY | 3 cut(s) | 653, 827, 857 |
| PvuII | CAGCTG | 1 cut(s) | 551 |
| RsaI | GTAC | 3 cut(s) | 216, 358, 1038 |
| RsaNI | GTAC | 3 cut(s) | 215, 357, 1037 |
| RseI | CAYNNNNRTG | 4 cut(s) | 128, 519, 717, 885 |
| SaqAI | TTAA | 7 cut(s) | 281, 380, 494, 540, 578, 1002, 1062 |
| Sau3AI | GATC | 8 cut(s) | 51, 76, 271, 334, 616, 653, 827, 857 |
| Sau96I | GGNCC | 4 cut(s) | 668, 709, 768, 978 |
| ScrFI | CCNGG | 2 cut(s) | 1073, 1074 |
| SfaNI | GCATC | 1 cut(s) | 855 |
| SfcI | CTRYAG | 1 cut(s) | 804 |
| Sfr274I | CTCGAG | 1 cut(s) | 606 |
| SinI | GGWCC | 2 cut(s) | 709, 978 |
| SlaI | CTCGAG | 1 cut(s) | 606 |
| SmaI | CCCGGG | 1 cut(s) | 1074 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 128, 519, 717, 885 |
| SmlI | CTYRAG | 2 cut(s) | 280, 606 |
| SmoI | CTYRAG | 2 cut(s) | 280, 606 |
| SnaBI | TACGTA | 1 cut(s) | 218 |
| SspI | AATATT | 1 cut(s) | 407 |
| SspMI | CTAG | 6 cut(s) | 38, 288, 500, 672, 821, 1146 |
| StyD4I | CCNGG | 2 cut(s) | 1071, 1072 |
| TaaI | ACNGT | 1 cut(s) | 518 |
| TaiI | ACGT | 3 cut(s) | 220, 246, 368 |
| TaqI | TCGA | 2 cut(s) | 208, 607 |
| TaqII | GACCGA | 1 cut(s) | 697 |
| TatI | WGTACW | 1 cut(s) | 356 |
| TfiI | GAWTC | 2 cut(s) | 116, 545 |
| Tru1I | TTAA | 7 cut(s) | 281, 380, 494, 540, 578, 1002, 1062 |
| Tru9I | TTAA | 7 cut(s) | 281, 380, 494, 540, 578, 1002, 1062 |
| TscAI | CASTG | 1 cut(s) | 521 |
| TseFI | GTSAC | 3 cut(s) | 161, 728, 1082 |
| Tsp45I | GTSAC | 3 cut(s) | 161, 728, 1082 |
| TspDTI | ATGAA | 3 cut(s) | 417, 548, 1108 |
| TspGWI | ACGGA | 1 cut(s) | 666 |
| TspMI | CCCGGG | 1 cut(s) | 1072 |
| TspRI | CASTG | 1 cut(s) | 521 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 975 |
| Vha464I | CTTAAG | 1 cut(s) | 280 |
| VpaK11BI | GGWCC | 2 cut(s) | 709, 978 |
| XapI | RAATTY | 5 cut(s) | 221, 247, 687, 762, 959 |
| XhoI | CTCGAG | 1 cut(s) | 606 |
| XmaI | CCCGGG | 1 cut(s) | 1072 |
| XspI | CTAG | 6 cut(s) | 38, 288, 500, 672, 821, 1146 |