Rroxscaffold_7G00162020

Carotenoid 9,10(9',10')-cleavage dioxygenase 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0013626
Physical Location & Seq
Forward (+)
4646565 .. 4651894
5330 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00162020.1

Sequence Viewer

Length: 1812 bp
ATGGCGTTTCAAGTGAATTGCTGTATTCAGAACAAGAAGCCCTCAGCTGTCCTAGACAATATTGAGTACTTCAAGACCACACTCTCCTCGGCTATCATGAAGCAGCCATTGTTGAGAAGGATGCAACAAGTTCCCATGCATATAGATGTCTCGAAAATCTTCAAGGACGCTTCTGCAAAAATGTTGGACGCCTTTGTAGATTCGGTGTTTGAATTCATTGATCAACCATTGCTTCCATCTCAGAAGAACTTCGCCCCAGTTGGTGAATTGGAAGGAGAAGGAGTTGTAATCACGAGCATCATCGGAAGAATTCCAGATAACTTTCCGGAGGGAGTCTACGTAAGAAATGGACCAAATCCTTTATTTGGAGGATTGAAATCGACGAAATCGGTGTTTGGAAGGTCAAGTCACATATGGATAGAAGGAGAAGGCATGGTTCATGCTCTGTATTTTACGAAGAACGACGTCGTCAGCAGTGATGGTAGCAGATGGACGGTCCGGTACAACAACAGACATGTCGAAACCGAAACTTACAAGCTTGAAAAACAAAGAAACAAGCCATCTTTTCTCCCTGCCATTGGTGGCGACTCGCCGGCTATTTTGTCTGCTTATCTCCTCAATTTGTTGAGGTTTGGCAAAGTAAACAAGTACTTAAGCAACACAAATGTGTTTGAGCATTCGGGGAGGTTTTACTCAGTTGCAGAAAATCACATACCACAAGAGATTGATATCCTTACGCTGGAAACTTTAGGCAATTGGGATGTCTCTGGAGCTTGGAACAGACCTTTTATCAGCCACCCGAAGAGAGCTCCAGGCACAGGGGAGTTGGTCATAATGGGCGTGGATGCAGTTAAGCCGTTTTGGGAAGTAGGGGTAGTTTCTGCTGATGGCAAAGAATTAATCCACAAGGTGGATCTCAAACTCAATAGGTGCAGCATTTGCCATGAAATAGGGGTTACGCAGAGGTACAATGTGATCATGGATATTGCACTAACTATAGACATAAAGAGACTTGTAGGTGGAGGCCCATTAGTAAAGTATAATGAGGAAGAATATGCAAGAATTGGTGTAATGCCTCGCTACGGTGACGCAAGTTCTATCCGGTGGTTTAAAGTTGAACCCAATTGCACATTTCACATCATCAATAGTTTTGAAGCTGGTGATGAGGTTGTAGTGTGGGGTTGTAAAGCTCTTGACTCAGTTATAGGTCCAAGTAATGAAAGCAGTACTGATAATAGCACCTCAACGGCAGAGGATGCTAGTAAATTATACTCCCATGCTTATGAATGGAGATTAAACATGGAGACTGGAGAAGTCAGGGAGAGATATCTCACTGGCAAAAAGTTTTCCATGGATTTTCCTACGATCAATGGAAACTTTTGCGGCCTTAAAAACAGATTTGGGTATGCCCAAGTCGTCGATTCAGTTGCGAGCTCTACCTCAGGGTTGCTTAAGTATGGTGGTATAGCCAAGCTACATTTTGAAGAGCCAGCTGAGGGAGAAGGCGAATTAGAAAATGAGGAAATAAAGGTAGAAAGACATATGTTTGAGGAGAACGCCTTTTGTACTGGAGCTGCTTTTGTCCCTAAACAAAGTGATAGTAGCAGGACTGGTAGTATTATTCTTGAAGAAGTAGAAGAAGATGATGGATGGGTTATTACTTTTGTTCACAATGAAGATACCAAAGTATCACAAGTTTATGTCATTGATACCAAGGAGTTTTGCAGTGAGCCTGTAGCCAAAATTACATTGCCCTGCAGAGTTCCATATGGATTTCATGGAGCTTTCATGCCAACCTCATCGAACACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RPE65

Protein Analysis

603

Amino Acids

67.31

Weight (kDa)

5.51

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPE65 PF03055 90 - 598 1.3e-110 Retinal pigment epithelial membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 468
AccB7I CCANNNNNTGG 1 cut(s) 910
AccI GTMKAC 1 cut(s) 336
AccIII TCCGGA 1 cut(s) 325
AciI CCGC 1 cut(s) 1383
AclWI GGATC 1 cut(s) 921
AcsI RAATTY 2 cut(s) 212, 309
AcyI GRCGYC 2 cut(s) 189, 465
AdeI CACNNNGTG 1 cut(s) 910
AfaI GTAC 6 cut(s) 68, 503, 650, 968, 1228, 1567
AfiI CCNNNNNNNGG 7 cut(s) 365, 578, 739, 818, 910, 1082, 1496
AflII CTTAAG 2 cut(s) 652, 1451
AflIII ACRYGT 1 cut(s) 514
AjnI CCWGG 1 cut(s) 811
AleI CACNNNNGTG 1 cut(s) 665
Alw21I GWGCWC 2 cut(s) 811, 1436
Alw26I GTCTC 4 cut(s) 154, 769, 1003, 1298
AlwI GGATC 1 cut(s) 921
Aor13HI TCCGGA 1 cut(s) 325
AoxI GGCC 2 cut(s) 1024, 1384
ApeKI GCWGC 3 cut(s) 103, 933, 1574
ApoI RAATTY 2 cut(s) 212, 309
AseI ATTAAT 1 cut(s) 899
Asp700I GAANNNNTTC 2 cut(s) 158, 248
AspS9I GGNCC 4 cut(s) 350, 496, 1025, 1208
AsuHPI GGTGA 3 cut(s) 275, 1097, 1172
AvaII GGWCC 3 cut(s) 350, 496, 1208
AxyI CCTNAGG 1 cut(s) 1441
BaeI ACNNNNGTAYC 4 cut(s) 1671, 1671, 1704, 1704
BanII GRGCYC 2 cut(s) 811, 1436
BauI CACGAG 1 cut(s) 292
Bbv12I GWGCWC 2 cut(s) 811, 1436
BbvCI CCTCAGC 2 cut(s) 43, 1494
BbvI GCAGC 3 cut(s) 115, 945, 1561
BccI CCATC 7 cut(s) 244, 473, 483, 568, 881, 1640, 1644
BceAI ACGGC 2 cut(s) 841, 1263
BcgI CGANNNNNNTGC 2 cut(s) 1409, 1443
BciT130I CCWGG 1 cut(s) 813
BclI TGATCA 2 cut(s) 220, 975
BcoDI GTCTC 4 cut(s) 154, 769, 1003, 1298
BfaI CTAG 2 cut(s) 53, 1260
BfmI CTRYAG 3 cut(s) 996, 1734, 1756
BfrI CTTAAG 2 cut(s) 652, 1451
BisI GCNGC 4 cut(s) 104, 934, 1384, 1575
BlsI GCNGC 4 cut(s) 105, 935, 1385, 1576
BmcAI AGTACT 3 cut(s) 68, 650, 1228
Bme1390I CCNGG 1 cut(s) 813
Bme18I GGWCC 3 cut(s) 350, 496, 1208
BmgT120I GGNCC 4 cut(s) 350, 496, 1025, 1208
BmrFI CCNGG 1 cut(s) 813
BmrI ACTGGG 1 cut(s) 251
BmsI GCATC 4 cut(s) 111, 306, 835, 1246
BmuI ACTGGG 1 cut(s) 251
BpmI CTGGAG 4 cut(s) 789, 795, 1329, 1590
Bpu10I CCTNAGC 2 cut(s) 43, 1494
BsaAI YACGTR 1 cut(s) 340
BsaBI GATNNNNATC 2 cut(s) 376, 728
BsaHI GRCGYC 2 cut(s) 189, 465
BsaJI CCNNGG 3 cut(s) 87, 1350, 1713
BsaWI WCCGGW 3 cut(s) 325, 498, 1101
BsaXI ACNNNNNCTCC 4 cut(s) 267, 297, 324, 354
Bsc4I CCNNNNNNNGG 7 cut(s) 365, 578, 739, 818, 910, 1082, 1496
Bse118I RCCGGY 1 cut(s) 592
Bse1I ACTGG 5 cut(s) 257, 1312, 1339, 1573, 1615
Bse21I CCTNAGG 1 cut(s) 1441
Bse3DI GCAATG 2 cut(s) 227, 1748
Bse8I GATNNNNATC 2 cut(s) 376, 728
BseAI TCCGGA 1 cut(s) 325
BseBI CCWGG 1 cut(s) 813
BseDI CCNNGG 3 cut(s) 87, 1350, 1713
BseGI GGATG 5 cut(s) 126, 766, 850, 1261, 1655
BseJI GATNNNNATC 2 cut(s) 376, 728
BseLI CCNNNNNNNGG 7 cut(s) 365, 578, 739, 818, 910, 1082, 1496
BseMI GCAATG 2 cut(s) 227, 1748
BseMII CTCAG 6 cut(s) 57, 254, 708, 1212, 1455, 1485
BseNI ACTGG 5 cut(s) 257, 1312, 1339, 1573, 1615
BseRI GAGGAG 3 cut(s) 76, 605, 1565
BseXI GCAGC 3 cut(s) 115, 945, 1561
BsgI GTGCAG 1 cut(s) 952
BshFI GGCC 2 cut(s) 1026, 1386
BsiHKAI GWGCWC 2 cut(s) 811, 1436
BsiSI CCGG 4 cut(s) 326, 499, 593, 1102
BslFI GGGAC 1 cut(s) 1568
BslI CCNNNNNNNGG 7 cut(s) 365, 578, 739, 818, 910, 1082, 1496
BsmAI GTCTC 4 cut(s) 154, 769, 1003, 1298
BsmFI GGGAC 1 cut(s) 1568
BsmI GAATGC 1 cut(s) 676
BsnI GGCC 2 cut(s) 1026, 1386
Bsp1286I GDGCHC 2 cut(s) 811, 1436
Bsp13I TCCGGA 1 cut(s) 325
Bsp143I GATC 4 cut(s) 220, 913, 975, 1365
Bsp19I CCATGG 1 cut(s) 1350
BspACI CCGC 1 cut(s) 1383
BspANI GGCC 2 cut(s) 1026, 1386
BspCNI CTCAG 6 cut(s) 56, 253, 707, 1211, 1454, 1486
BspEI TCCGGA 1 cut(s) 325
BspHI TCATGA 1 cut(s) 96
BspMAI CTGCAG 1 cut(s) 1760
BspPI GGATC 1 cut(s) 921
BspQI GCTCTTC 1 cut(s) 1479
BspTI CTTAAG 2 cut(s) 652, 1451
BsrDI GCAATG 2 cut(s) 227, 1748
BsrFI RCCGGY 1 cut(s) 592
BsrI ACTGG 5 cut(s) 257, 1312, 1339, 1573, 1615
BssAI RCCGGY 1 cut(s) 592
BssECI CCNNGG 3 cut(s) 87, 1350, 1713
BssMI GATC 4 cut(s) 220, 913, 975, 1365
BssNI GRCGYC 2 cut(s) 189, 465
BssSI CACGAG 1 cut(s) 292
BssT1I CCWWGG 2 cut(s) 1350, 1713
Bst2BI CACGAG 1 cut(s) 292
Bst2UI CCWGG 1 cut(s) 813
Bst4CI ACNGT 2 cut(s) 496, 1085
Bst6I CTCTTC 2 cut(s) 797, 1479
BstACI GRCGYC 2 cut(s) 189, 465
BstAFI CTTAAG 2 cut(s) 652, 1451
BstAPI GCANNNNNTGC 2 cut(s) 939, 1256
BstBAI YACGTR 1 cut(s) 340
BstC8I GCNNGC 3 cut(s) 594, 1432, 1491
BstDEI CTNAG 6 cut(s) 43, 240, 694, 1198, 1441, 1494
BstDSI CCRYGG 1 cut(s) 1350
BstF5I GGATG 5 cut(s) 126, 766, 850, 1261, 1655
BstKTI GATC 4 cut(s) 223, 916, 978, 1368
BstMAI GTCTC 4 cut(s) 154, 769, 1003, 1298
BstMBI GATC 4 cut(s) 220, 913, 975, 1365
BstMWI GCNNNNNNNGC 2 cut(s) 939, 1256
BstNI CCWGG 1 cut(s) 813
BstNSI RCATGY 1 cut(s) 518
BstSCI CCNGG 1 cut(s) 811
BstSFI CTRYAG 3 cut(s) 996, 1734, 1756
BstSNI TACGTA 1 cut(s) 340
BstV1I GCAGC 3 cut(s) 115, 945, 1561
BstX2I RGATCY 1 cut(s) 913
BstYI RGATCY 1 cut(s) 913
Bsu36I CCTNAGG 1 cut(s) 1441
BsuRI GGCC 2 cut(s) 1026, 1386
BtgI CCRYGG 1 cut(s) 1350
BtsCI GGATG 5 cut(s) 126, 766, 850, 1261, 1655
BtsI GCAGTG 2 cut(s) 481, 1732
BtsIMutI CAGTG 3 cut(s) 481, 1332, 1732
Cac8I GCNNGC 3 cut(s) 594, 1432, 1491
CciI TCATGA 1 cut(s) 96
Cfr10I RCCGGY 1 cut(s) 592
Cfr13I GGNCC 4 cut(s) 350, 496, 1025, 1208
CpoI CGGWCCG 1 cut(s) 496
CseI GACGC 3 cut(s) 176, 197, 1097
Csp6I GTAC 6 cut(s) 67, 502, 649, 967, 1227, 1566
CspI CGGWCCG 1 cut(s) 496
CviQI GTAC 6 cut(s) 67, 502, 649, 967, 1227, 1566
DdeI CTNAG 6 cut(s) 43, 240, 694, 1198, 1441, 1494
DpnI GATC 4 cut(s) 222, 915, 977, 1367
DpnII GATC 4 cut(s) 220, 913, 975, 1365
DraI TTTAAA 1 cut(s) 1111
DraIII CACNNNGTG 1 cut(s) 910
Eam1104I CTCTTC 2 cut(s) 797, 1479
EarI CTCTTC 2 cut(s) 797, 1479
Ecl136II GAGCTC 2 cut(s) 809, 1434
Eco105I TACGTA 1 cut(s) 340
Eco130I CCWWGG 2 cut(s) 1350, 1713
Eco24I GRGCYC 2 cut(s) 811, 1436
Eco32I GATATC 2 cut(s) 730, 1328
Eco47I GGWCC 3 cut(s) 350, 496, 1208
Eco53kI GAGCTC 2 cut(s) 809, 1434
Eco81I CCTNAGG 1 cut(s) 1441
EcoICRI GAGCTC 2 cut(s) 809, 1434
EcoRI GAATTC 2 cut(s) 212, 309
EcoRII CCWGG 1 cut(s) 811
EcoRV GATATC 2 cut(s) 730, 1328
EcoT14I CCWWGG 2 cut(s) 1350, 1713
EcoT22I ATGCAT 1 cut(s) 141
EcoT38I GRGCYC 2 cut(s) 811, 1436
ErhI CCWWGG 2 cut(s) 1350, 1713
FaqI GGGAC 1 cut(s) 1568
FauNDI CATATG 3 cut(s) 413, 1542, 1768
FbaI TGATCA 2 cut(s) 220, 975
FblI GTMKAC 1 cut(s) 336
Fnu4HI GCNGC 4 cut(s) 104, 934, 1384, 1575
FokI GGATG 5 cut(s) 133, 773, 857, 1268, 1662
FriOI GRGCYC 2 cut(s) 811, 1436
Fsp4HI GCNGC 4 cut(s) 104, 934, 1384, 1575
FspBI CTAG 2 cut(s) 53, 1260
GluI GCNGC 4 cut(s) 104, 934, 1384, 1575
GsuI CTGGAG 4 cut(s) 789, 795, 1329, 1590
HaeIII GGCC 2 cut(s) 1026, 1386
HapII CCGG 4 cut(s) 326, 499, 593, 1102
HgaI GACGC 3 cut(s) 176, 197, 1097
Hin1I GRCGYC 2 cut(s) 189, 465
HindIII AAGCTT 1 cut(s) 536
HinfI GANTC 5 cut(s) 200, 333, 587, 1196, 1421
HpaII CCGG 4 cut(s) 326, 499, 593, 1102
HphI GGTGA 3 cut(s) 275, 1097, 1172
Hpy166II GTNNAC 3 cut(s) 337, 643, 1669
Hpy188I TCNGA 3 cut(s) 30, 243, 305
Hpy188III TCNNGA 9 cut(s) 73, 97, 151, 292, 314, 326, 768, 1193, 1625
Hpy8I GTNNAC 3 cut(s) 337, 643, 1669
Hpy99I CGWCG 4 cut(s) 385, 467, 470, 1421
HpyAV CCTTC 7 cut(s) 111, 266, 272, 393, 416, 422, 1496
HpyCH4III ACNGT 2 cut(s) 496, 1085
HpyCH4IV ACGT 2 cut(s) 339, 465
HpyF10VI GCNNNNNNNGC 2 cut(s) 939, 1256
HpyF3I CTNAG 6 cut(s) 43, 240, 694, 1198, 1441, 1494
HpySE526I ACGT 2 cut(s) 339, 465
Hsp92I GRCGYC 2 cut(s) 189, 465
Kpn2I TCCGGA 1 cut(s) 325
KroI GCCGGC 1 cut(s) 592
KroNI GCCGGC 1 cut(s) 594
Ksp22I TGATCA 2 cut(s) 220, 975
Kzo9I GATC 4 cut(s) 220, 913, 975, 1365
LguI GCTCTTC 1 cut(s) 1479
LmnI GCTCC 4 cut(s) 770, 814, 1571, 1781
Lsp1109I GCAGC 3 cut(s) 115, 945, 1561
LweI GCATC 4 cut(s) 111, 306, 835, 1246
MaeI CTAG 2 cut(s) 53, 1260
MaeII ACGT 2 cut(s) 339, 465
MaeIII GTNAC 3 cut(s) 407, 955, 1085
MalI GATC 4 cut(s) 222, 915, 977, 1367
MboI GATC 4 cut(s) 220, 913, 975, 1365
MfeI CAATTG 2 cut(s) 754, 1123
MflI RGATCY 1 cut(s) 913
MhlI GDGCHC 2 cut(s) 811, 1436
MlyI GAGTC 3 cut(s) 342, 581, 1190
MmeI TCCRAC 1 cut(s) 165
Mph1103I ATGCAT 1 cut(s) 141
MroI TCCGGA 1 cut(s) 325
MroNI GCCGGC 1 cut(s) 592
MroXI GAANNNNTTC 2 cut(s) 158, 248
MseI TTAA 7 cut(s) 653, 852, 899, 1110, 1295, 1389, 1452
MslI CAYNNNNRTG 3 cut(s) 144, 665, 1281
MspA1I CMGCKG 2 cut(s) 47, 1493
MspCI CTTAAG 2 cut(s) 652, 1451
MspI CCGG 4 cut(s) 326, 499, 593, 1102
MspR9I CCNGG 1 cut(s) 813
MunI CAATTG 2 cut(s) 754, 1123
Mva1269I GAATGC 1 cut(s) 676
MvaI CCWGG 1 cut(s) 813
MwoI GCNNNNNNNGC 2 cut(s) 939, 1256
NaeI GCCGGC 1 cut(s) 594
NcoI CCATGG 1 cut(s) 1350
NdeI CATATG 3 cut(s) 413, 1542, 1768
NdeII GATC 4 cut(s) 220, 913, 975, 1365
NgoMIV GCCGGC 1 cut(s) 592
NmeAIII GCCGAG 1 cut(s) 68
NmuCI GTSAC 2 cut(s) 407, 1085
NsiI ATGCAT 1 cut(s) 141
NspI RCATGY 1 cut(s) 518
OliI CACNNNNGTG 1 cut(s) 665
PagI TCATGA 1 cut(s) 96
PciI ACATGT 1 cut(s) 514
PciSI GCTCTTC 1 cut(s) 1479
PctI GAATGC 1 cut(s) 676
PdiI GCCGGC 1 cut(s) 594
PdmI GAANNNNTTC 2 cut(s) 158, 248
PfeI GAWTC 2 cut(s) 200, 1421
PflFI GACNNNGTC 1 cut(s) 467
PflMI CCANNNNNTGG 1 cut(s) 910
PkrI GCNGC 4 cut(s) 105, 935, 1385, 1576
PleI GAGTC 3 cut(s) 341, 581, 1190
PpsI GAGTC 3 cut(s) 341, 581, 1190
Ppu21I YACGTR 1 cut(s) 340
PscI ACATGT 1 cut(s) 514
PshBI ATTAAT 1 cut(s) 899
Psp124BI GAGCTC 2 cut(s) 811, 1436
Psp6I CCWGG 1 cut(s) 811
PspGI CCWGG 1 cut(s) 811
PspPI GGNCC 4 cut(s) 350, 496, 1025, 1208
PstI CTGCAG 1 cut(s) 1760
PsuI RGATCY 1 cut(s) 913
PsyI GACNNNGTC 1 cut(s) 467
PvuII CAGCTG 2 cut(s) 47, 1493
RsaI GTAC 6 cut(s) 68, 503, 650, 968, 1228, 1567
RsaNI GTAC 6 cut(s) 67, 502, 649, 967, 1227, 1566
RseI CAYNNNNRTG 3 cut(s) 144, 665, 1281
Rsr2I CGGWCCG 1 cut(s) 496
RsrII CGGWCCG 1 cut(s) 496
SacI GAGCTC 2 cut(s) 811, 1436
SapI GCTCTTC 1 cut(s) 1479
SaqAI TTAA 7 cut(s) 653, 852, 899, 1110, 1295, 1389, 1452
SatI GCNGC 4 cut(s) 104, 934, 1384, 1575
Sau3AI GATC 4 cut(s) 220, 913, 975, 1365
Sau96I GGNCC 4 cut(s) 350, 496, 1025, 1208
ScaI AGTACT 3 cut(s) 68, 650, 1228
SchI GAGTC 3 cut(s) 342, 581, 1190
ScrFI CCNGG 1 cut(s) 813
SduI GDGCHC 2 cut(s) 811, 1436
SfaNI GCATC 4 cut(s) 111, 306, 835, 1246
SfcI CTRYAG 3 cut(s) 996, 1734, 1756
SinI GGWCC 3 cut(s) 350, 496, 1208
SmiMI CAYNNNNRTG 3 cut(s) 144, 665, 1281
SmlI CTYRAG 2 cut(s) 652, 1451
SmoI CTYRAG 2 cut(s) 652, 1451
SnaBI TACGTA 1 cut(s) 340
SsiI CCGC 1 cut(s) 1383
SspI AATATT 1 cut(s) 61
SspMI CTAG 2 cut(s) 53, 1260
SstI GAGCTC 2 cut(s) 811, 1436
StyD4I CCNGG 1 cut(s) 811
StyI CCWWGG 2 cut(s) 1350, 1713
TaaI ACNGT 2 cut(s) 496, 1085
TaiI ACGT 2 cut(s) 342, 468
TaqI TCGA 5 cut(s) 152, 380, 519, 1419, 1802
TatI WGTACW 4 cut(s) 66, 648, 1226, 1565
TauI GCSGC 1 cut(s) 1386
TfiI GAWTC 2 cut(s) 200, 1421
Tru1I TTAA 7 cut(s) 653, 852, 899, 1110, 1295, 1389, 1452
Tru9I TTAA 7 cut(s) 653, 852, 899, 1110, 1295, 1389, 1452
TscAI CASTG 3 cut(s) 481, 1339, 1732
TseFI GTSAC 2 cut(s) 407, 1085
TseI GCWGC 3 cut(s) 103, 933, 1574
Tsp45I GTSAC 2 cut(s) 407, 1085
TspDTI ATGAA 9 cut(s) 113, 205, 428, 960, 1233, 1299, 1689, 1766, 1777
TspRI CASTG 3 cut(s) 481, 1339, 1732
Tth111I GACNNNGTC 1 cut(s) 467
Van91I CCANNNNNTGG 1 cut(s) 910
Vha464I CTTAAG 2 cut(s) 652, 1451
VpaK11BI GGWCC 3 cut(s) 350, 496, 1208
VspI ATTAAT 1 cut(s) 899
XapI RAATTY 2 cut(s) 212, 309
XceI RCATGY 1 cut(s) 518
XmiI GTMKAC 1 cut(s) 336
XmnI GAANNNNTTC 2 cut(s) 158, 248
XspI CTAG 2 cut(s) 53, 1260
ZraI GACGTC 1 cut(s) 466
ZrmI AGTACT 3 cut(s) 68, 650, 1228
Zsp2I ATGCAT 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.