Rroxscaffold_7G00163550

Protein of unknown function (DUF1350)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0013928
Physical Location & Seq
Reverse (-)
5772140 .. 5775293
3154 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00163550.1

Sequence Viewer

Length: 1203 bp
ATGGAAGTTACCGCTTCGTCTTCCTCCGCCAAATTTGGATGCGCATACGACTTCCCTCAATTCCAAATCAACCGTCATGGGCCTCATGGCCATAGTTGCTTCTTCCGATTTCCATGGAAGAGCAAAGCGGTTGTTGCAGTGAGCTCAACTTCATCCACTACCAACACCACCTCTAGTGTCAGTAATGGGTATGTGGGCCCAGGCATCCGAAACTACATCCGGAGCGGTTCTTGCTTGCTGATCCCTCCGCCGGCCGGCAAGAAGCCCCGGGCTATCATCAAGTTTCTGGGCGGTGCCTTCATCGGAGCTGTTCCTGAAGTCACTTACAGCTACTTGACTGAGCTATTGGCCAAGGAGGGGTTTCTGGTTATTTCAGTGCCGTATAATGTGACCTTTGATCATGTCCAAGCTGCTCACCAAGTCTATGAGAGGTTCAACTCTTGCTTGGACACCATCTTGGCCTCTGGGTTGCCCAATGTTGATCTATCACCTGCCCAACTAGCTGAGTTGCCAGTGTTTTCTGTTGGCCATAGCAATGGTGCACTGCTCCAAGTGCTCGCTGGGAGCTATTTCTCCGATAAAATCCCAAAGGCTAATGCCATAATCGCATACAACAATAGACCAGCAACAGAGGCTGTCCCTTACTTTGAGCAGCTTGGACCGTTAGTTAATCAGATGGTCCCTATTGTAGAAGCATCTCCCGTTCCTTCCATGGCTAGGACTGCCTCAGGAGATGCATGGAAGGCTCTAGTTGATGCAGCTGGAGCAGTTCTACCAGACAATGAAAAGGAGACTCTAAATTCACTCACTAAGTTTGTTGATCAGTTGTCGTTGGTGCTGAATGAGGTAACCCAAGGGACATCAGAGTTTAAGCCAACACCCTCTGAAAATCGTGAATTTTTTAAGAGCTCATACAATGTGAAACACACTCTACTGGTGAAGTTCAATTTTGACGGAATTGATGAGACAGATACTCTCGAGGACACATTGAAGCCTCGTGTGGAAGCTATTGGCGGGACACTAGAAAAGGTTGAGATAAGTGGTAACCATATCACACCATGCGTCCAGGAGCCCAAGTGGCAAGTAGGTGCCTTGTACACTCCTGCAGATGCTATTGCTCAGAGTCTTAAAACTCTTTCGCTAAATGATGTTAGAGTCCTATCAAGAACTATAATCGACTGGTTTCGAGGTTTTGAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1350

Protein Analysis

400

Amino Acids

43.44

Weight (kDa)

5.81

Isoelectric Point (pI)

27.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1350 PF07082 76 - 395 9.5e-50 Protein of unknown function (DUF1350)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013928)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43540 AT3G43540
fragaria_vesca FvH4_2g37050 FvH4_2g37050
malus_domestica MD08G1047000.v1.1
pyrus_communis pycom08g03940
rosa_chinensis RchiOBHm_Chr6g0304731
rosa_laevigata RLG00000010955
rosa_multiflora Rmu_co8515209.1_g000001
rosa_roxburghii Rroxscaffold_7G00163550
rosa_rugosa Rorug06G0333900 Rorug06G0334000
rosa_samantha Rh6AG445900 Rh6BG455800 Rh6CG459000 Rh6DG446000
rosa_wichuraiana Rw6G038790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 499
Acc16I TGCGCA 1 cut(s) 43
Acc36I ACCTGC 1 cut(s) 499
AccB1I GGYRCC 2 cut(s) 293, 1088
AccBSI CCGCTC 1 cut(s) 225
AccIII TCCGGA 1 cut(s) 219
AciI CCGC 7 cut(s) 12, 27, 128, 225, 248, 291, 1014
AclWI GGATC 1 cut(s) 235
AcoI YGGCCR 4 cut(s) 88, 252, 348, 526
AcsI RAATTY 3 cut(s) 32, 799, 896
AcuI CTGAAG 1 cut(s) 336
AfaI GTAC 1 cut(s) 1097
AfiI CCNNNNNNNGG 4 cut(s) 250, 254, 357, 717
AgsI TTSAA 4 cut(s) 436, 946, 991, 1196
AjnI CCWGG 2 cut(s) 199, 1065
Alw21I GWGCWC 4 cut(s) 146, 544, 558, 911
Alw26I GTCTC 2 cut(s) 785, 959
Alw44I GTGCAC 1 cut(s) 540
AlwI GGATC 1 cut(s) 235
AlwNI CAGNNNCTG 1 cut(s) 635
Ama87I CYCGRG 2 cut(s) 267, 977
Aor13HI TCCGGA 1 cut(s) 219
AoxI GGCC 7 cut(s) 80, 88, 196, 252, 348, 459, 526
ApaI GGGCCC 1 cut(s) 200
ApaLI GTGCAC 1 cut(s) 540
ApeKI GCWGC 3 cut(s) 410, 652, 758
ApoI RAATTY 3 cut(s) 32, 799, 896
ArsI GACNNNNNNTTYG 2 cut(s) 58, 90
AspLEI GCGC 1 cut(s) 44
AspS9I GGNCC 5 cut(s) 80, 196, 197, 659, 679
AsuC2I CCSGG 2 cut(s) 268, 269
AsuHPI GGTGA 3 cut(s) 407, 480, 949
AvaI CYCGRG 2 cut(s) 267, 977
AvaII GGWCC 2 cut(s) 659, 679
AxyI CCTNAGG 1 cut(s) 727
BaeGI GKGCMC 2 cut(s) 200, 544
BalI TGGCCA 3 cut(s) 90, 350, 528
BanI GGYRCC 2 cut(s) 293, 1088
BanII GRGCYC 4 cut(s) 146, 200, 911, 1074
BauI CACGAG 1 cut(s) 996
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 4 cut(s) 146, 544, 558, 911
BbvI GCAGC 3 cut(s) 397, 664, 770
BccI CCATC 2 cut(s) 461, 670
BceAI ACGGC 1 cut(s) 364
BciT130I CCWGG 2 cut(s) 201, 1067
BclI TGATCA 2 cut(s) 397, 820
BcnI CCSGG 2 cut(s) 268, 269
BcoDI GTCTC 2 cut(s) 785, 959
BfaI CTAG 5 cut(s) 174, 500, 717, 749, 1022
BfmI CTRYAG 1 cut(s) 1104
BfuAI ACCTGC 1 cut(s) 499
BglI GCCNNNNNGGC 1 cut(s) 1078
BisI GCNGC 3 cut(s) 411, 653, 759
BlsI GCNGC 3 cut(s) 412, 654, 760
Bme1390I CCNGG 4 cut(s) 201, 268, 269, 1067
Bme18I GGWCC 2 cut(s) 659, 679
BmeT110I CYCGRG 2 cut(s) 267, 977
BmgT120I GGNCC 5 cut(s) 80, 196, 197, 659, 679
BmiI GGNNCC 5 cut(s) 198, 295, 681, 1071, 1090
BmrFI CCNGG 4 cut(s) 201, 268, 269, 1067
BmsI GCATC 6 cut(s) 29, 213, 704, 724, 745, 1099
BpiI GAAGAC 1 cut(s) 12
BpmI CTGGAG 1 cut(s) 783
BpuMI CCSGG 2 cut(s) 268, 269
BsaJI CCNNGG 7 cut(s) 113, 199, 266, 267, 351, 711, 853
BsaWI WCCGGW 1 cut(s) 219
BsaXI ACNNNNNCTCC 2 cut(s) 1061, 1091
Bsc4I CCNNNNNNNGG 4 cut(s) 250, 254, 357, 717
Bse118I RCCGGY 2 cut(s) 250, 254
Bse1I ACTGG 3 cut(s) 512, 939, 1184
Bse21I CCTNAGG 1 cut(s) 727
Bse3DI GCAATG 1 cut(s) 541
BseAI TCCGGA 1 cut(s) 219
BseBI CCWGG 2 cut(s) 201, 1067
BseDI CCNNGG 7 cut(s) 113, 199, 266, 267, 351, 711, 853
BseGI GGATG 4 cut(s) 44, 152, 204, 216
BseLI CCNNNNNNNGG 4 cut(s) 250, 254, 357, 717
BseMI GCAATG 1 cut(s) 541
BseMII CTCAG 4 cut(s) 330, 495, 741, 1133
BseNI ACTGG 3 cut(s) 512, 939, 1184
BseSI GKGCMC 2 cut(s) 200, 544
BseX3I CGGCCG 1 cut(s) 252
BseXI GCAGC 3 cut(s) 397, 664, 770
BseYI CCCAGC 1 cut(s) 560
Bsh1285I CGRYCG 1 cut(s) 255
BshFI GGCC 7 cut(s) 82, 90, 198, 254, 350, 461, 528
BshNI GGYRCC 2 cut(s) 293, 1088
BsiEI CGRYCG 1 cut(s) 255
BsiHKAI GWGCWC 4 cut(s) 146, 544, 558, 911
BsiHKCI CYCGRG 2 cut(s) 267, 977
BsiSI CCGG 4 cut(s) 220, 251, 255, 268
BslFI GGGAC 4 cut(s) 623, 665, 871, 1030
BslI CCNNNNNNNGG 4 cut(s) 250, 254, 357, 717
BsmAI GTCTC 2 cut(s) 785, 959
BsmFI GGGAC 4 cut(s) 623, 665, 871, 1030
BsnI GGCC 7 cut(s) 82, 90, 198, 254, 350, 461, 528
BsoBI CYCGRG 2 cut(s) 267, 977
Bsp120I GGGCCC 1 cut(s) 196
Bsp1286I GDGCHC 6 cut(s) 146, 200, 544, 558, 911, 1074
Bsp13I TCCGGA 1 cut(s) 219
Bsp1407I TGTACA 1 cut(s) 1095
Bsp143I GATC 4 cut(s) 240, 397, 481, 820
Bsp19I CCATGG 2 cut(s) 113, 711
BspACI CCGC 7 cut(s) 12, 27, 128, 225, 248, 291, 1014
BspANI GGCC 7 cut(s) 82, 90, 198, 254, 350, 461, 528
BspCNI CTCAG 4 cut(s) 331, 496, 740, 1132
BspEI TCCGGA 1 cut(s) 219
BspLI GGNNCC 5 cut(s) 198, 295, 681, 1071, 1090
BspMAI CTGCAG 1 cut(s) 1108
BspMI ACCTGC 1 cut(s) 499
BspPI GGATC 1 cut(s) 235
BspQI GCTCTTC 1 cut(s) 113
BspT107I GGYRCC 2 cut(s) 293, 1088
BsrBI CCGCTC 1 cut(s) 225
BsrDI GCAATG 1 cut(s) 541
BsrFI RCCGGY 2 cut(s) 250, 254
BsrGI TGTACA 1 cut(s) 1095
BsrI ACTGG 3 cut(s) 512, 939, 1184
BssAI RCCGGY 2 cut(s) 250, 254
BssECI CCNNGG 7 cut(s) 113, 199, 266, 267, 351, 711, 853
BssMI GATC 4 cut(s) 240, 397, 481, 820
BssSI CACGAG 1 cut(s) 996
BssT1I CCWWGG 4 cut(s) 113, 351, 711, 853
Bst2BI CACGAG 1 cut(s) 996
Bst2UI CCWGG 2 cut(s) 201, 1067
Bst4CI ACNGT 2 cut(s) 74, 663
Bst6I CTCTTC 1 cut(s) 113
BstAUI TGTACA 1 cut(s) 1095
BstC8I GCNNGC 4 cut(s) 236, 252, 256, 558
BstDEI CTNAG 5 cut(s) 339, 504, 727, 810, 1119
BstDSI CCRYGG 2 cut(s) 113, 711
BstEII GGTNACC 2 cut(s) 847, 1043
BstF5I GGATG 4 cut(s) 44, 152, 204, 216
BstHHI GCGC 1 cut(s) 44
BstKTI GATC 4 cut(s) 243, 400, 484, 823
BstMAI GTCTC 2 cut(s) 785, 959
BstMBI GATC 4 cut(s) 240, 397, 481, 820
BstMCI CGRYCG 1 cut(s) 255
BstNI CCWGG 2 cut(s) 201, 1067
BstPI GGTNACC 2 cut(s) 847, 1043
BstSCI CCNGG 4 cut(s) 199, 266, 267, 1065
BstSFI CTRYAG 1 cut(s) 1104
BstSLI GKGCMC 2 cut(s) 200, 544
BstV1I GCAGC 3 cut(s) 397, 664, 770
BstV2I GAAGAC 1 cut(s) 12
BstXI CCANNNNNNTGG 1 cut(s) 536
BstZI CGGCCG 1 cut(s) 252
Bsu36I CCTNAGG 1 cut(s) 727
BsuRI GGCC 7 cut(s) 82, 90, 198, 254, 350, 461, 528
BtgI CCRYGG 2 cut(s) 113, 711
BtsCI GGATG 4 cut(s) 44, 152, 204, 216
BtsI GCAGTG 2 cut(s) 144, 542
BtsIMutI CAGTG 4 cut(s) 144, 381, 519, 542
BveI ACCTGC 1 cut(s) 499
Cac8I GCNNGC 4 cut(s) 236, 252, 256, 558
CaiI CAGNNNCTG 1 cut(s) 635
CfoI GCGC 1 cut(s) 44
Cfr10I RCCGGY 2 cut(s) 250, 254
Cfr13I GGNCC 5 cut(s) 80, 196, 197, 659, 679
Cfr9I CCCGGG 1 cut(s) 267
CseI GACGC 1 cut(s) 1051
Csp6I GTAC 1 cut(s) 1096
CviAII CATG 7 cut(s) 77, 86, 114, 401, 712, 738, 1059
CviQI GTAC 1 cut(s) 1096
DdeI CTNAG 5 cut(s) 339, 504, 727, 810, 1119
DpnI GATC 4 cut(s) 242, 399, 483, 822
DpnII GATC 4 cut(s) 240, 397, 481, 820
EaeI YGGCCR 4 cut(s) 88, 252, 348, 526
EagI CGGCCG 1 cut(s) 252
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
EciI GGCGGA 2 cut(s) 16, 237
Ecl136II GAGCTC 2 cut(s) 144, 909
EclXI CGGCCG 1 cut(s) 252
Eco130I CCWWGG 4 cut(s) 113, 351, 711, 853
Eco24I GRGCYC 4 cut(s) 146, 200, 911, 1074
Eco47I GGWCC 2 cut(s) 659, 679
Eco52I CGGCCG 1 cut(s) 252
Eco53kI GAGCTC 2 cut(s) 144, 909
Eco57I CTGAAG 1 cut(s) 336
Eco81I CCTNAGG 1 cut(s) 727
Eco88I CYCGRG 2 cut(s) 267, 977
Eco91I GGTNACC 2 cut(s) 847, 1043
EcoICRI GAGCTC 2 cut(s) 144, 909
EcoO65I GGTNACC 2 cut(s) 847, 1043
EcoRII CCWGG 2 cut(s) 199, 1065
EcoT14I CCWWGG 4 cut(s) 113, 351, 711, 853
EcoT22I ATGCAT 1 cut(s) 739
EcoT38I GRGCYC 4 cut(s) 146, 200, 911, 1074
ErhI CCWWGG 4 cut(s) 113, 351, 711, 853
FaeI CATG 7 cut(s) 80, 89, 117, 404, 715, 741, 1062
FaqI GGGAC 4 cut(s) 623, 665, 871, 1030
FatI CATG 7 cut(s) 76, 85, 113, 400, 711, 737, 1058
FauI CCCGC 1 cut(s) 1007
FbaI TGATCA 2 cut(s) 397, 820
Fnu4HI GCNGC 3 cut(s) 411, 653, 759
FokI GGATG 4 cut(s) 51, 139, 191, 203
FriOI GRGCYC 4 cut(s) 146, 200, 911, 1074
Fsp4HI GCNGC 3 cut(s) 411, 653, 759
FspAI RTGCGCAY 1 cut(s) 43
FspBI CTAG 5 cut(s) 174, 500, 717, 749, 1022
FspI TGCGCA 1 cut(s) 43
GlaI GCGC 1 cut(s) 43
GluI GCNGC 3 cut(s) 411, 653, 759
GsaI CCCAGC 1 cut(s) 564
GsuI CTGGAG 1 cut(s) 783
HaeIII GGCC 7 cut(s) 82, 90, 198, 254, 350, 461, 528
HapII CCGG 4 cut(s) 220, 251, 255, 268
HgaI GACGC 1 cut(s) 1051
HhaI GCGC 1 cut(s) 44
Hin1II CATG 7 cut(s) 80, 89, 117, 404, 715, 741, 1062
Hin6I GCGC 1 cut(s) 42
HinP1I GCGC 1 cut(s) 42
HinfI GANTC 3 cut(s) 793, 1123, 1155
HpaII CCGG 4 cut(s) 220, 251, 255, 268
HphI GGTGA 3 cut(s) 407, 480, 949
Hpy166II GTNNAC 2 cut(s) 542, 1098
Hpy188I TCNGA 8 cut(s) 107, 209, 305, 577, 675, 865, 886, 1122
Hpy188III TCNNGA 6 cut(s) 220, 314, 729, 893, 977, 1164
Hpy8I GTNNAC 2 cut(s) 542, 1098
HpyAV CCTTC 3 cut(s) 307, 717, 736
HpyCH4III ACNGT 2 cut(s) 74, 663
HpyCH4V TGCA 5 cut(s) 137, 542, 737, 758, 1106
HpyF3I CTNAG 5 cut(s) 339, 504, 727, 810, 1119
Hsp92II CATG 7 cut(s) 80, 89, 117, 404, 715, 741, 1062
HspAI GCGC 1 cut(s) 42
Kpn2I TCCGGA 1 cut(s) 219
KroI GCCGGC 2 cut(s) 250, 254
KroNI GCCGGC 2 cut(s) 252, 256
Ksp22I TGATCA 2 cut(s) 397, 820
Kzo9I GATC 4 cut(s) 240, 397, 481, 820
LguI GCTCTTC 1 cut(s) 113
LmnI GCTCC 6 cut(s) 222, 305, 552, 564, 764, 1069
Lsp1109I GCAGC 3 cut(s) 397, 664, 770
LweI GCATC 6 cut(s) 29, 213, 704, 724, 745, 1099
MaeI CTAG 5 cut(s) 174, 500, 717, 749, 1022
MaeIII GTNAC 5 cut(s) 7, 319, 388, 847, 1043
MalI GATC 4 cut(s) 242, 399, 483, 822
MbiI CCGCTC 1 cut(s) 225
MboI GATC 4 cut(s) 240, 397, 481, 820
MboII GAAGA 3 cut(s) 12, 94, 130
MhlI GDGCHC 6 cut(s) 146, 200, 544, 558, 911, 1074
MlsI TGGCCA 3 cut(s) 90, 350, 528
MluCI AATT 6 cut(s) 32, 59, 799, 896, 946, 957
MluNI TGGCCA 3 cut(s) 90, 350, 528
MlyI GAGTC 3 cut(s) 787, 1132, 1164
Mox20I TGGCCA 3 cut(s) 90, 350, 528
Mph1103I ATGCAT 1 cut(s) 739
MroI TCCGGA 1 cut(s) 219
MroNI GCCGGC 2 cut(s) 250, 254
MscI TGGCCA 3 cut(s) 90, 350, 528
MseI TTAA 4 cut(s) 669, 870, 903, 1128
MslI CAYNNNNRTG 1 cut(s) 534
Msp20I TGGCCA 3 cut(s) 90, 350, 528
MspA1I CMGCKG 1 cut(s) 761
MspI CCGG 4 cut(s) 220, 251, 255, 268
MspR9I CCNGG 4 cut(s) 201, 268, 269, 1067
MvaI CCWGG 2 cut(s) 201, 1067
NaeI GCCGGC 2 cut(s) 252, 256
NciI CCSGG 2 cut(s) 268, 269
NcoI CCATGG 2 cut(s) 113, 711
NdeII GATC 4 cut(s) 240, 397, 481, 820
NgoMIV GCCGGC 2 cut(s) 250, 254
NlaIII CATG 7 cut(s) 80, 89, 117, 404, 715, 741, 1062
NlaIV GGNNCC 5 cut(s) 198, 295, 681, 1071, 1090
NmuCI GTSAC 2 cut(s) 319, 388
NsbI TGCGCA 1 cut(s) 43
NsiI ATGCAT 1 cut(s) 739
PaeR7I CTCGAG 1 cut(s) 977
PaqCI CACCTGC 1 cut(s) 499
PciSI GCTCTTC 1 cut(s) 113
PdiI GCCGGC 2 cut(s) 252, 256
PfoI TCCNGGA 1 cut(s) 1065
PkrI GCNGC 3 cut(s) 412, 654, 760
PleI GAGTC 3 cut(s) 787, 1131, 1163
PpsI GAGTC 3 cut(s) 787, 1131, 1163
Psp124BI GAGCTC 2 cut(s) 146, 911
Psp6I CCWGG 2 cut(s) 199, 1065
PspEI GGTNACC 2 cut(s) 847, 1043
PspFI CCCAGC 1 cut(s) 560
PspGI CCWGG 2 cut(s) 199, 1065
PspN4I GGNNCC 5 cut(s) 198, 295, 681, 1071, 1090
PspOMI GGGCCC 1 cut(s) 196
PspPI GGNCC 5 cut(s) 80, 196, 197, 659, 679
PstI CTGCAG 1 cut(s) 1108
PstNI CAGNNNCTG 1 cut(s) 635
PvuII CAGCTG 1 cut(s) 761
RsaI GTAC 1 cut(s) 1097
RsaNI GTAC 1 cut(s) 1096
RseI CAYNNNNRTG 1 cut(s) 534
SacI GAGCTC 2 cut(s) 146, 911
SapI GCTCTTC 1 cut(s) 113
SaqAI TTAA 4 cut(s) 669, 870, 903, 1128
SatI GCNGC 3 cut(s) 411, 653, 759
Sau3AI GATC 4 cut(s) 240, 397, 481, 820
Sau96I GGNCC 5 cut(s) 80, 196, 197, 659, 679
SchI GAGTC 3 cut(s) 787, 1132, 1164
ScrFI CCNGG 4 cut(s) 201, 268, 269, 1067
SduI GDGCHC 6 cut(s) 146, 200, 544, 558, 911, 1074
SfaNI GCATC 6 cut(s) 29, 213, 704, 724, 745, 1099
SfcI CTRYAG 1 cut(s) 1104
Sfr274I CTCGAG 1 cut(s) 977
SinI GGWCC 2 cut(s) 659, 679
SlaI CTCGAG 1 cut(s) 977
SmaI CCCGGG 1 cut(s) 269
SmiMI CAYNNNNRTG 1 cut(s) 534
SmlI CTYRAG 1 cut(s) 977
SmoI CTYRAG 1 cut(s) 977
Sse9I AATT 6 cut(s) 32, 59, 799, 896, 946, 957
SsiI CCGC 7 cut(s) 12, 27, 128, 225, 248, 291, 1014
SspMI CTAG 5 cut(s) 174, 500, 717, 749, 1022
SstI GAGCTC 2 cut(s) 146, 911
StyD4I CCNGG 4 cut(s) 199, 266, 267, 1065
StyI CCWWGG 4 cut(s) 113, 351, 711, 853
TaaI ACNGT 2 cut(s) 74, 663
TaqI TCGA 3 cut(s) 978, 1176, 1186
TasI AATT 6 cut(s) 32, 59, 799, 896, 946, 957
TatI WGTACW 1 cut(s) 1095
Tru1I TTAA 4 cut(s) 669, 870, 903, 1128
Tru9I TTAA 4 cut(s) 669, 870, 903, 1128
TscAI CASTG 4 cut(s) 144, 381, 519, 549
TseFI GTSAC 2 cut(s) 319, 388
TseI GCWGC 3 cut(s) 410, 652, 758
Tsp45I GTSAC 2 cut(s) 319, 388
TspDTI ATGAA 3 cut(s) 141, 289, 798
TspGWI ACGGA 1 cut(s) 969
TspMI CCCGGG 1 cut(s) 267
TspRI CASTG 4 cut(s) 144, 381, 519, 549
VneI GTGCAC 1 cut(s) 540
VpaK11BI GGWCC 2 cut(s) 659, 679
XapI RAATTY 3 cut(s) 32, 799, 896
XcmI CCANNNNNNNNNTGG 1 cut(s) 557
XhoI CTCGAG 1 cut(s) 977
XmaI CCCGGG 1 cut(s) 267
XspI CTAG 5 cut(s) 174, 500, 717, 749, 1022
Zsp2I ATGCAT 1 cut(s) 739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.