Rroxscaffold_7G00168320

Protein OSB1, mitochondrial-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
9212675 .. 9215000
2326 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00168320.1

Sequence Viewer

Length: 1077 bp
ATGTCCTCCGGCAATGGCGCAGTTACTAGTGGTGGTGGTCCGGAATTCCATGGAGAAAGCTATGGGGGTGCCCTTAGCATATCCCGATTAGGTGCCCTTAAGGTTTCCACACCTCGGGCTATTTGGACTATGCTTGCTTTGGATGGTGATGTGGATGTCGTGGGCTCGGGTAGAAATGGAAGGGGAGACTCCTCTTTCAAAAAAAACTCGGCCGACGACACCAGAAAGCTACAAAATCAGAATGCGGGAAGTGCTCGGAAAACCCCGCCAAAACCCGGCCGCCTCCAAACTCCGGATCACCATCATATGAAGGCGTTTCGTCTCCTATTTCCGCCGTTCAACAAACCAAGTCCGAAATCGCCTTTATTTATTCAAAAGCTCGCCGCCTATTCGTCTTCAGCCGCTAACCCTAGGTTTTCCGATTCTTTCTTCGAAGATGAAGAAGGCAGCGGAGTTTACCAGCACAAACTCAAGTTCCAGCGTCCCACCACAATCCAACGGCGACAGAATACGGGTCCGGTCAACTCTGCTAGCTTCATTGGCTCCGTGATCCTCCCCCTCCGGGTCGCAAACACCGGCCACGGCGGTCGTTTTGGCGTTCACACTCTTCTCAGCGTCAGAAATTGCCCCCAGTCTGTTAGCAGTTTCCGGATATTACTGAAGATGTGGGACGAGATGGCAGTATTGTCTTTCAAACATTTGAAACCAAATGATTTTATTTATGTCTCAGGTCATCTAGGTTCTTACACAAAGAATGATCCGGATGGGAGGATCACACTGTATCACGAGTTAGTTGTACAGGAGTTGAATTACGTGGCACAAAACGGACAAGGACCAAGATCTGAAAATCATGAGGAACCACAATCTGATGCAGGTGAAACTGGTTTGGAGAAGTGTAGGGAACGCCTTCACTTATGGCAAGTATTTTTTGCCAATCCATATGATTGGTGGGATAACAGGAAGACAAAGTTGAATTCAAGACGACCAGATTTTAAGCACAAGTATATGGATGAAGCTCTCTGGCTGAGCCCAGATGATCCTCCATGGATTAAAAACAAATTCATCGGCTTGACTTGA

Protein Analysis

358

Amino Acids

40.01

Weight (kDa)

9.55

Isoelectric Point (pI)

38.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 863
Acc36I ACCTGC 1 cut(s) 863
AccB1I GGYRCC 2 cut(s) 68, 92
AccIII TCCGGA 4 cut(s) 40, 292, 648, 760
AciI CCGC 8 cut(s) 245, 266, 280, 332, 384, 402, 450, 585
AclWI GGATC 5 cut(s) 303, 544, 752, 779, 1031
AcoI YGGCCR 3 cut(s) 210, 277, 577
AcsI RAATTY 3 cut(s) 44, 973, 1058
AcuI CTGAAG 2 cut(s) 381, 680
AfaI GTAC 1 cut(s) 798
AfiI CCNNNNNNNGG 4 cut(s) 114, 275, 292, 562
AflII CTTAAG 1 cut(s) 98
AgsI TTSAA 8 cut(s) 199, 340, 374, 694, 703, 808, 973, 978
AhlI ACTAGT 1 cut(s) 26
AluBI AGCT 5 cut(s) 60, 229, 379, 534, 1016
AluI AGCT 5 cut(s) 60, 229, 379, 534, 1016
Alw21I GWGCWC 1 cut(s) 256
Alw26I GTCTC 3 cut(s) 180, 326, 730
AlwI GGATC 5 cut(s) 303, 544, 752, 779, 1031
Ama87I CYCGRG 2 cut(s) 114, 166
Aor13HI TCCGGA 4 cut(s) 40, 292, 648, 760
AoxI GGCC 3 cut(s) 210, 277, 577
ApeKI GCWGC 1 cut(s) 447
ApoI RAATTY 3 cut(s) 44, 973, 1058
Asp700I GAANNNNTTC 1 cut(s) 906
AspA2I CCTAGG 1 cut(s) 410
AspLEI GCGC 1 cut(s) 20
AspS9I GGNCC 3 cut(s) 38, 515, 833
AsuC2I CCSGG 2 cut(s) 276, 563
AsuHPI GGTGA 3 cut(s) 158, 290, 887
AsuII TTCGAA 1 cut(s) 432
AsuNHI GCTAGC 1 cut(s) 530
AvaI CYCGRG 2 cut(s) 114, 166
AvaII GGWCC 3 cut(s) 38, 515, 833
AvrII CCTAGG 1 cut(s) 410
BaeGI GKGCMC 2 cut(s) 73, 97
BanI GGYRCC 2 cut(s) 68, 92
BanII GRGCYC 2 cut(s) 167, 1031
BauI CACGAG 1 cut(s) 785
BbsI GAAGAC 2 cut(s) 387, 968
Bbv12I GWGCWC 1 cut(s) 256
BbvI GCAGC 1 cut(s) 459
BccI CCATC 4 cut(s) 137, 309, 670, 758
BceAI ACGGC 3 cut(s) 319, 515, 598
BcnI CCSGG 2 cut(s) 276, 563
BcoDI GTCTC 3 cut(s) 180, 326, 730
BcuI ACTAGT 1 cut(s) 26
BfaI CTAG 4 cut(s) 27, 411, 531, 737
BfrI CTTAAG 1 cut(s) 98
BfuAI ACCTGC 1 cut(s) 863
BglII AGATCT 1 cut(s) 839
BisI GCNGC 4 cut(s) 280, 384, 402, 448
BlnI CCTAGG 1 cut(s) 410
BlpI GCTNAGC 1 cut(s) 1025
BlsI GCNGC 4 cut(s) 281, 385, 403, 449
Bme1390I CCNGG 2 cut(s) 276, 563
Bme18I GGWCC 3 cut(s) 38, 515, 833
BmeT110I CYCGRG 2 cut(s) 114, 166
BmgT120I GGNCC 3 cut(s) 38, 515, 833
BmiI GGNNCC 5 cut(s) 70, 94, 516, 544, 858
BmrFI CCNGG 2 cut(s) 276, 563
BmrI ACTGGG 1 cut(s) 625
BmsI GCATC 1 cut(s) 859
BmtI GCTAGC 1 cut(s) 534
BmuI ACTGGG 1 cut(s) 625
BpiI GAAGAC 2 cut(s) 387, 968
Bpu10I CCTNAGC 1 cut(s) 74
Bpu1102I GCTNAGC 1 cut(s) 1025
Bpu14I TTCGAA 1 cut(s) 432
BpuEI CTTGAG 1 cut(s) 455
BpuMI CCSGG 2 cut(s) 276, 563
BsaAI YACGTR 1 cut(s) 814
BsaBI GATNNNNATC 1 cut(s) 300
BsaJI CCNNGG 5 cut(s) 49, 113, 410, 580, 1043
BsaWI WCCGGW 5 cut(s) 40, 292, 517, 648, 760
Bsc4I CCNNNNNNNGG 4 cut(s) 114, 275, 292, 562
Bse118I RCCGGY 1 cut(s) 575
Bse1I ACTGG 2 cut(s) 631, 886
Bse3DI GCAATG 1 cut(s) 19
Bse8I GATNNNNATC 1 cut(s) 300
BseAI TCCGGA 4 cut(s) 40, 292, 648, 760
BseDI CCNNGG 5 cut(s) 49, 113, 410, 580, 1043
BseGI GGATG 4 cut(s) 148, 160, 769, 1015
BseJI GATNNNNATC 1 cut(s) 300
BseLI CCNNNNNNNGG 4 cut(s) 114, 275, 292, 562
BseMI GCAATG 1 cut(s) 19
BseMII CTCAG 3 cut(s) 625, 741, 1016
BseNI ACTGG 2 cut(s) 631, 886
BseRI GAGGAG 1 cut(s) 181
BseSI GKGCMC 2 cut(s) 73, 97
BseX3I CGGCCG 2 cut(s) 210, 277
BseXI GCAGC 1 cut(s) 459
Bsh1285I CGRYCG 3 cut(s) 213, 280, 589
BshFI GGCC 3 cut(s) 212, 279, 579
BshNI GGYRCC 2 cut(s) 68, 92
BsiEI CGRYCG 3 cut(s) 213, 280, 589
BsiHKAI GWGCWC 1 cut(s) 256
BsiHKCI CYCGRG 2 cut(s) 114, 166
BsiSI CCGG 9 cut(s) 9, 41, 276, 293, 518, 562, 576, 649, 761
BslFI GGGAC 2 cut(s) 468, 683
BslI CCNNNNNNNGG 4 cut(s) 114, 275, 292, 562
BsmAI GTCTC 3 cut(s) 180, 326, 730
BsmBI CGTCTC 1 cut(s) 326
BsmFI GGGAC 2 cut(s) 468, 683
BsmI GAATGC 1 cut(s) 247
BsnI GGCC 3 cut(s) 212, 279, 579
BsoBI CYCGRG 2 cut(s) 114, 166
Bsp119I TTCGAA 1 cut(s) 432
Bsp1286I GDGCHC 5 cut(s) 73, 97, 167, 256, 1031
Bsp13I TCCGGA 4 cut(s) 40, 292, 648, 760
Bsp1407I TGTACA 1 cut(s) 796
Bsp143I GATC 6 cut(s) 295, 549, 757, 771, 839, 1036
Bsp1720I GCTNAGC 1 cut(s) 1025
Bsp19I CCATGG 2 cut(s) 49, 1043
BspACI CCGC 8 cut(s) 245, 266, 280, 332, 384, 402, 450, 585
BspANI GGCC 3 cut(s) 212, 279, 579
BspCNI CTCAG 3 cut(s) 624, 740, 1017
BspEI TCCGGA 4 cut(s) 40, 292, 648, 760
BspHI TCATGA 1 cut(s) 850
BspLI GGNNCC 5 cut(s) 70, 94, 516, 544, 858
BspMI ACCTGC 1 cut(s) 863
BspOI GCTAGC 1 cut(s) 534
BspPI GGATC 5 cut(s) 303, 544, 752, 779, 1031
BspT104I TTCGAA 1 cut(s) 432
BspT107I GGYRCC 2 cut(s) 68, 92
BspTI CTTAAG 1 cut(s) 98
BsrDI GCAATG 1 cut(s) 19
BsrFI RCCGGY 1 cut(s) 575
BsrGI TGTACA 1 cut(s) 796
BsrI ACTGG 2 cut(s) 631, 886
BssAI RCCGGY 1 cut(s) 575
BssECI CCNNGG 5 cut(s) 49, 113, 410, 580, 1043
BssMI GATC 6 cut(s) 295, 549, 757, 771, 839, 1036
BssSI CACGAG 1 cut(s) 785
BssT1I CCWWGG 3 cut(s) 49, 410, 1043
Bst2BI CACGAG 1 cut(s) 785
Bst4CI ACNGT 1 cut(s) 780
Bst6I CTCTTC 1 cut(s) 612
BstAFI CTTAAG 1 cut(s) 98
BstAUI TGTACA 1 cut(s) 796
BstBAI YACGTR 1 cut(s) 814
BstBI TTCGAA 1 cut(s) 432
BstC8I GCNNGC 3 cut(s) 135, 381, 532
BstDEI CTNAG 4 cut(s) 74, 611, 727, 1025
BstDSI CCRYGG 3 cut(s) 49, 580, 1043
BstF5I GGATG 4 cut(s) 148, 160, 769, 1015
BstHHI GCGC 1 cut(s) 20
BstKTI GATC 6 cut(s) 298, 552, 760, 774, 842, 1039
BstMAI GTCTC 3 cut(s) 180, 326, 730
BstMBI GATC 6 cut(s) 295, 549, 757, 771, 839, 1036
BstMCI CGRYCG 3 cut(s) 213, 280, 589
BstMWI GCNNNNNNNGC 2 cut(s) 251, 540
BstSCI CCNGG 2 cut(s) 274, 561
BstSLI GKGCMC 2 cut(s) 73, 97
BstV1I GCAGC 1 cut(s) 459
BstV2I GAAGAC 2 cut(s) 387, 968
BstX2I RGATCY 1 cut(s) 839
BstXI CCANNNNNNTGG 1 cut(s) 945
BstYI RGATCY 1 cut(s) 839
BstZI CGGCCG 2 cut(s) 210, 277
BsuRI GGCC 3 cut(s) 212, 279, 579
BtgI CCRYGG 3 cut(s) 49, 580, 1043
BtsCI GGATG 4 cut(s) 148, 160, 769, 1015
BtsIMutI CAGTG 1 cut(s) 776
BveI ACCTGC 1 cut(s) 863
Cac8I GCNNGC 3 cut(s) 135, 381, 532
CciI TCATGA 1 cut(s) 850
CfoI GCGC 1 cut(s) 20
Cfr10I RCCGGY 1 cut(s) 575
Cfr13I GGNCC 3 cut(s) 38, 515, 833
CseI GACGC 2 cut(s) 470, 604
Csp6I GTAC 1 cut(s) 797
CviAII CATG 3 cut(s) 50, 851, 1044
CviQI GTAC 1 cut(s) 797
DdeI CTNAG 4 cut(s) 74, 611, 727, 1025
DpnI GATC 6 cut(s) 297, 551, 759, 773, 841, 1038
DpnII GATC 6 cut(s) 295, 549, 757, 771, 839, 1036
EaeI YGGCCR 3 cut(s) 210, 277, 577
EagI CGGCCG 2 cut(s) 210, 277
Eam1104I CTCTTC 1 cut(s) 612
EarI CTCTTC 1 cut(s) 612
EciI GGCGGA 1 cut(s) 321
EclXI CGGCCG 2 cut(s) 210, 277
Eco130I CCWWGG 3 cut(s) 49, 410, 1043
Eco24I GRGCYC 2 cut(s) 167, 1031
Eco47I GGWCC 3 cut(s) 38, 515, 833
Eco52I CGGCCG 2 cut(s) 210, 277
Eco57I CTGAAG 2 cut(s) 381, 680
Eco88I CYCGRG 2 cut(s) 114, 166
EcoRI GAATTC 2 cut(s) 44, 973
EcoT14I CCWWGG 3 cut(s) 49, 410, 1043
EcoT38I GRGCYC 2 cut(s) 167, 1031
ErhI CCWWGG 3 cut(s) 49, 410, 1043
Esp3I CGTCTC 1 cut(s) 326
FaeI CATG 3 cut(s) 53, 854, 1047
FaqI GGGAC 2 cut(s) 468, 683
FatI CATG 3 cut(s) 49, 850, 1043
FauI CCCGC 2 cut(s) 238, 273
FauNDI CATATG 2 cut(s) 306, 940
Fnu4HI GCNGC 4 cut(s) 280, 384, 402, 448
FokI GGATG 4 cut(s) 155, 167, 776, 1022
FriOI GRGCYC 2 cut(s) 167, 1031
Fsp4HI GCNGC 4 cut(s) 280, 384, 402, 448
FspBI CTAG 4 cut(s) 27, 411, 531, 737
GlaI GCGC 1 cut(s) 19
GluI GCNGC 4 cut(s) 280, 384, 402, 448
HaeIII GGCC 3 cut(s) 212, 279, 579
HapII CCGG 9 cut(s) 9, 41, 276, 293, 518, 562, 576, 649, 761
HgaI GACGC 2 cut(s) 470, 604
HhaI GCGC 1 cut(s) 20
Hin1II CATG 3 cut(s) 53, 854, 1047
Hin6I GCGC 1 cut(s) 18
HinP1I GCGC 1 cut(s) 18
HincII GTYRAC 1 cut(s) 523
HindII GTYRAC 1 cut(s) 523
HinfI GANTC 2 cut(s) 188, 422
HpaII CCGG 9 cut(s) 9, 41, 276, 293, 518, 562, 576, 649, 761
HphI GGTGA 3 cut(s) 158, 290, 887
Hpy166II GTNNAC 3 cut(s) 457, 523, 601
Hpy188I TCNGA 7 cut(s) 240, 258, 354, 421, 620, 844, 868
Hpy188III TCNNGA 8 cut(s) 41, 84, 293, 649, 761, 785, 851, 978
Hpy8I GTNNAC 3 cut(s) 457, 523, 601
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 4 cut(s) 174, 304, 437, 917
HpyCH4III ACNGT 1 cut(s) 780
HpyCH4IV ACGT 1 cut(s) 813
HpyCH4V TGCA 1 cut(s) 872
HpyF10VI GCNNNNNNNGC 2 cut(s) 251, 540
HpyF3I CTNAG 4 cut(s) 74, 611, 727, 1025
HpySE526I ACGT 1 cut(s) 813
Hsp92II CATG 3 cut(s) 53, 854, 1047
HspAI GCGC 1 cut(s) 18
Kpn2I TCCGGA 4 cut(s) 40, 292, 648, 760
Kzo9I GATC 6 cut(s) 295, 549, 757, 771, 839, 1036
LmnI GCTCC 1 cut(s) 548
Lsp1109I GCAGC 1 cut(s) 459
LweI GCATC 1 cut(s) 859
MaeI CTAG 4 cut(s) 27, 411, 531, 737
MaeII ACGT 1 cut(s) 813
MaeIII GTNAC 1 cut(s) 22
MalI GATC 6 cut(s) 297, 551, 759, 773, 841, 1038
MboI GATC 6 cut(s) 295, 549, 757, 771, 839, 1036
MboII GAAGA 7 cut(s) 387, 421, 446, 452, 599, 673, 973
MflI RGATCY 1 cut(s) 839
MhlI GDGCHC 5 cut(s) 73, 97, 167, 256, 1031
MluCI AATT 5 cut(s) 44, 622, 808, 973, 1058
MlyI GAGTC 1 cut(s) 182
MmeI TCCRAC 1 cut(s) 520
MnlI CCTC 9 cut(s) 16, 123, 202, 293, 563, 569, 762, 847, 1050
MroI TCCGGA 4 cut(s) 40, 292, 648, 760
MroXI GAANNNNTTC 1 cut(s) 906
MseI TTAA 3 cut(s) 99, 993, 1050
MspA1I CMGCKG 1 cut(s) 450
MspCI CTTAAG 1 cut(s) 98
MspI CCGG 9 cut(s) 9, 41, 276, 293, 518, 562, 576, 649, 761
MspR9I CCNGG 2 cut(s) 276, 563
Mva1269I GAATGC 1 cut(s) 247
MwoI GCNNNNNNNGC 2 cut(s) 251, 540
NciI CCSGG 2 cut(s) 276, 563
NcoI CCATGG 2 cut(s) 49, 1043
NdeI CATATG 2 cut(s) 306, 940
NdeII GATC 6 cut(s) 295, 549, 757, 771, 839, 1036
NheI GCTAGC 1 cut(s) 530
NlaIII CATG 3 cut(s) 53, 854, 1047
NlaIV GGNNCC 5 cut(s) 70, 94, 516, 544, 858
NmeAIII GCCGAG 1 cut(s) 188
NspV TTCGAA 1 cut(s) 432
PagI TCATGA 1 cut(s) 850
PaqCI CACCTGC 1 cut(s) 863
PctI GAATGC 1 cut(s) 247
PdmI GAANNNNTTC 1 cut(s) 906
PfeI GAWTC 1 cut(s) 422
PkrI GCNGC 4 cut(s) 281, 385, 403, 449
PleI GAGTC 1 cut(s) 182
PpsI GAGTC 1 cut(s) 182
Ppu21I YACGTR 1 cut(s) 814
PspN4I GGNNCC 5 cut(s) 70, 94, 516, 544, 858
PspPI GGNCC 3 cut(s) 38, 515, 833
PsuI RGATCY 1 cut(s) 839
RsaI GTAC 1 cut(s) 798
RsaNI GTAC 1 cut(s) 797
SaqAI TTAA 3 cut(s) 99, 993, 1050
SatI GCNGC 4 cut(s) 280, 384, 402, 448
Sau3AI GATC 6 cut(s) 295, 549, 757, 771, 839, 1036
Sau96I GGNCC 3 cut(s) 38, 515, 833
SchI GAGTC 1 cut(s) 182
ScrFI CCNGG 2 cut(s) 276, 563
SduI GDGCHC 5 cut(s) 73, 97, 167, 256, 1031
SfaNI GCATC 1 cut(s) 859
SfuI TTCGAA 1 cut(s) 432
SinI GGWCC 3 cut(s) 38, 515, 833
SmlI CTYRAG 2 cut(s) 98, 470
SmoI CTYRAG 2 cut(s) 98, 470
SpeI ACTAGT 1 cut(s) 26
Sse9I AATT 5 cut(s) 44, 622, 808, 973, 1058
SsiI CCGC 8 cut(s) 245, 266, 280, 332, 384, 402, 450, 585
SspMI CTAG 4 cut(s) 27, 411, 531, 737
StyD4I CCNGG 2 cut(s) 274, 561
StyI CCWWGG 3 cut(s) 49, 410, 1043
TaaI ACNGT 1 cut(s) 780
TaiI ACGT 1 cut(s) 816
TaqI TCGA 1 cut(s) 432
TasI AATT 5 cut(s) 44, 622, 808, 973, 1058
TatI WGTACW 1 cut(s) 796
TauI GCSGC 3 cut(s) 282, 386, 404
TfiI GAWTC 1 cut(s) 422
Tru1I TTAA 3 cut(s) 99, 993, 1050
Tru9I TTAA 3 cut(s) 99, 993, 1050
TscAI CASTG 1 cut(s) 783
TseI GCWGC 1 cut(s) 447
TspDTI ATGAA 5 cut(s) 323, 453, 526, 1026, 1051
TspGWI ACGGA 2 cut(s) 535, 840
TspRI CASTG 1 cut(s) 783
Vha464I CTTAAG 1 cut(s) 98
VpaK11BI GGWCC 3 cut(s) 38, 515, 833
XapI RAATTY 3 cut(s) 44, 973, 1058
XcmI CCANNNNNNNNNTGG 1 cut(s) 945
XmaJI CCTAGG 1 cut(s) 410
XmnI GAANNNNTTC 1 cut(s) 906
XspI CTAG 4 cut(s) 27, 411, 531, 737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.