Rroxscaffold_7G00171680

Protein kinase C conserved region 2 (CalB)

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
11986412 .. 11996386
9975 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00171680.1

Sequence Viewer

Length: 4725 bp
ATGGCTTCTAAAAAGTGGTGGATCAAGGGGCAAGAAGCATCAGCTATGGCACTTACAAAGCTTATCCGAACAGCCGATTCGGCTACCATTAATCAGTTGTTAGCTTTGCTCTTAGGTGACTCTCCATGCTCAAAGGCCCATACCGTCAGGGTGTTGGGTCATGTACTCACAATGGCATCACACAAGGATCTTGTGCATAAGGGTTCAGCATCTAATAAAGGGTTGAGGTCTCTCGTTCAGGTTCTCAACTCGTCAAATGAAGAAACTCAAGAGTATGCCGCATCTGTCTTAGCTGATCTATTCAGCATGAGACAAGATATTTGTGACACTCTAGCAACTGATGAGATCGTGCATCCTTGCATGAAGCTTTTGACCAGCAGCACACAAGCTGTTGCAACACAGTCGGCTCGAGCTTTGGGTGCTCTTTCCCGTCCTATGAAGACCAAAACAATAAGCAAGATGTCTTATATTGCAGAAGGGGATGTTAAACCCCTCATCAAACTAGCAAAAACTTCTTCAATTGATGCTGCTCAAACTGCAGTTGCTGCACTCGCCAATCTTCTCTCTGATCCCCAGATCGCTGCAGAAGCCCTGGCAGAAGATGTTGTTTCAGCTTTGATAAGAGTACTGGAAGATGGAACTACAGAAGGTAAAAAGAATGCATCCCGTGCCCTTCATCAATTGTTGAAGCATTTTCCAGTAGGTGATGTGCTCACAGGAAGTGATCATTGCCATTTTGCTATTCGTGCTGTTGTTGATTCCTTAAATGCATTGGATATGGATGAGATTGATGCTGCTGATGCTTTAGAAGTAGTAGCACTTTTGGCCAGAACCAAACAGGGTGCGAACTTCACTTACTCCCCATGGTTTGTATTTGCCGAAGTTGAATCGAGCTTAGAACCTCTTGTCCGCTGTCTGGTCGAAGGGTCTCCTTTGCTTCAGGATAAGGCAATAGAAGTTTTGTCTAGGCTTTGCGGGGAGCAACCAGTTGTGCTTGGTGATCTATTGATTGCAAGATCTGGATCCCTTGGTTCACTAGCTGACAGAATAATGAACTCATCTAGTTTAGAAGTCAGAGTTGGAGGAGCTGCATTACTCATTTGTGCAGCAAAAGAGCACAAAGAGCAGTGGATGGAAGTACTTGAGGTGTCAGGATATTTAAAACCATTAATGTATGCTTTAGTGGATATGATGAAGCAAAATTGTAGCTGCTCCTCTTTAGAAATTGAAGTCCGAACTTCTAAAGCTTTTATGGAAAGAACTGCATTCCGCGAAGTGGATGAGTTTGATGTCCCTGATCCAGCCATTGTCTTGGGGGGTACTGTTGCTTTGTGGTTGCTATGTATAATTGGTTCCTGTAATGCAAAGAGCAAACTCACCATTATGGAAGCTGGAGGTCTTGAGGCTCTCTCTGACAAGCTTGAGAGCCACACTTCCAATCCACAGGCAGATTATGAGGATACTGAAGGTATATGGATTAGTGCACTGCTTCTGGCTATTCTCTTCCAAGATGCCAATGTCGTTTCATCTCCTACAACAATGCGGATCATAGCTTCTCTTGCGCTTCTGCTGAGATCAGATGAGGTGATTGATAGGTTCTTTGCTGCCCAGTCAATGGCCAGTCTTGTTTGCAGTGGTAATAAGGGAATAATTCTTGCCATTGCAAATTCAGGTGCTGTTGCTGGATTGATAACCCTCATTGGTTACGTAGAATCTGATATGCCTAACCTTGTTACTTTATCAGAAGAGTTTTCTCTGGTGCGAAACCCTGATCAAGTTGTTTTGGAATACCTTTTTGATTTTGAAGATGTAAGAGTTGGATCCACAGCACGCAAATCTATACCTCTCTTGGTGGATCTCTTGAGACCAATGCCAGATAGACCTGGTGCCCCTCCAGTTGCTCTTAAACTCTTGACCTGTATTGCTGATGGAAGTGATACAAACAAATTAGTCATGGCTGAAGCTGGAGCTCTGGACGCTCTGACAAAGTACCTGTCTTTGAGCCCACAAGATTCGACTGAAGCTGCAATATCTGATTTATTCAGAATATTGTTTAGCCATCCTGATCTGATTCGCTATGAAGCATCAGTTAGTTCGTTGAATCAGCTCATAGCTGTTCTGCGTCTGGGGTCAAGAAATGCTAGATACAGTGCTGCAAGAGCTCTTCATGAACTATTTGATGCTGAGAACATCAGAGATTCTGATCTAGCCAGGCAATCTGTTCAGCCATTGGTTGACATGCTTAACGCTGCATCAGAGAATGAACAAGAGGCTGCTCTTGTTGCGGTAATTAAGCTGACTTCCGGAAATTCTTCTACCGCAGCTTTGTTGACTGATGTGGAGGGAAATCCACTGGAGAGTTTATTTAAAATATTGTCTTCTGCTTCATCCTTGGATTTGAAGAGACTTGCTGCACAACTATGTTGTGTACTATTTGATAGTACCAAAGTCAGAGGAAATCCAATTGCCTCTGAATGTATAGAGCCTCTTATTTCCTTGATGCTTTCTGGTATAAATGCAGCTGTAGAAGCTGGGGTTTGTGCCTTTGAAAAATTGTTGGATGATGAACACCAGGTAGAGCTTGCAGTGAACTATAATGTTGTCGATCTTCTTGTTGGATTAGTTTCTGGTACGAACAGTCAGCTCATTGAGGCTAGCATCTGCTCTCTCATAAAGTTGGGGAAAGACCGGACCCAATGCAAATCGGATATGATCAATGCTGGCATTATTGATAACTGTCTTGAGCTACTCCCTGTTGCAGCCAGTTCATTATGCTCTTCTATTGCTGAATTATTTCGCATTTTGACAAATAGTGATGCAATTGCTAGAAGTTCAGCTGCTGCAACAATTGTAGAACCCCTTTTCCTAGTTTTACTTCGTCCAGATTTCAGTATGTGGGGACAGCACAGTGCATTGCAAGCACTAGTAAATATTTTGGAGAAGCCTCAAAGCCTTGCCACTTTAAAACTTACGCCTAGCCAAGTCATTGAGCCTCTGATTTCATTTCTTGAATCCCCATCTCTAGCCATCCAGCAGCTTGGTACAGAATTGCTATCTCATCTTCTTGCACAAGAACATTTTCAGCAAGATATTACAACAAAAAATGCTGTTGTTCCTCTTGTGCAACTTGCGGGAATTGGAATACTGAACTTACAGCAAACAGCGATAAAGGCATTGGAAAAAATATCCACAAGATGGCCAAAGGCAGTTGCTGATGCTGGAGGTATTTTTGAGCTTGGAAAGGTTATTATACAAGATGATCCTCAGCCACCTCATGCATTGTGGGAATCAGCTGCTTTAGTTCTCTCAAATGTTTTGTGCTTCAATGCTGAGTACTACTTTAAGGTTCCTGTGGTGGTTCTTGTTAAAATGTTGCATTCAACAGTGGATAGCACTATTACGGTGGCTCTCAATGCACTACTTGTTCATGAAAGGAGTGATAAGCTAAGTGCTGAACAGATGACTGAAAATGGTGCTATAGATGCCTTGTTGGACCTTTTAACATCTCATCAGTGTGAAGAAGCATCTGGAAGGTTACTTGAAGCGTTATTCAACAATGTCAGGATACGAGCAATGAAGGTTTCCAAGTATGCAATAGCACCTTTATCACAGTATCTGTTGGATTCACAAACCAAATCACAATCTGGAAAACTTCTCGTAGCTCTAGCTCTTGGAGACCTTTCCCAACACGAAGGGCTTGCTAGAGCCAGTGATTCTGTTTCTGCATGTCGGGCATTAATAAGCTTGCTTGAAGATCAGCCCACAGAAGATATGAAAATGGTGGCAATTTGTGCATTGCAAAATTTTGTTATGAACAGCCGAACGAATCGGCGTGCTGTCGCAGAAGCAGGGGGAATACTGGTTATTCAAGAACTACTACTGTCTCTTAATGCAGAAGTTGCTGGGCAAGCAGCATTGCTTATCAAATTTTTGTTTTCTAATCACACGCTTCAAGAATATGTGTCAAACGAGCTCATCAGATCTTTGACAGCTGCATTAGAGAGAGAGTTGTGGTCCACAGCAACTATTAATGAAGAGGTTTTGAGAGCCCTACATATGATATTCACCAACTTTCCTAAGCTCCATATTTCCGAGGCAGCCACTCTCTGCATTCCCAATCTGATTGGAGCCCTTAAATCTGGCAGTGAGGCAGCTCAGGATGTCGTGTTGGACACCCTTTGCTTGTTGAGACATTCTTGGTCAACCATGCCAATAGATATTGCAAAGTCTCAATCCGTGGTTGCTGCTGAAGCCATTCCCATCTTACAAATGCTTATGAAAACCTGCCCACCAAGTTTCCATGAGAGAGCAGACAGCCTGTTGCATTGCTTACCTGGTTGTTTGACTGTTACAATCAAGCGTGGAAACAACCTTAAACAGGCTATGGGAGGCACAAATGCTTTTTGCCGATTGACAATAGGCAACGGTCCTCCTCGACAAACCAAGGTAGTGAGCCACTGCACTTCTCCTGAATGGAAAGAAGGGTTTACGTGGGCATTTGATGTGCCCCCAAAGGGACAAAAGCTCCACATCATCTGCAAAAGCAAAAATACCTTTGGAAAGTCAACACTGGGGAGAGTGACTATCCAGATCGATAAAGTTGTGTCAGAAGGAGTATACAGTGGATTATTCAGCCTAAACCATGACAACAGCAAAGATGGATCTTCACGTACACTTGAAATCGAGATTATCTGGTCCAACAGAATGCCCGATGATGAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000271 GO:0000902 GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005856 GO:0005874 GO:0005881 GO:0005886 GO:0005938 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009664 GO:0009826 GO:0009832 GO:0009987 GO:0010330 GO:0010383 GO:0010941 GO:0015630 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030243 GO:0030244 GO:0030863 GO:0030981 GO:0032446 GO:0032502 GO:0032989 GO:0032991 GO:0033036 GO:0033365 GO:0033612 GO:0033692 GO:0034613 GO:0034637 GO:0034645 GO:0036211 GO:0040007 GO:0042546 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0044036 GO:0044038 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044380 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045229 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048589 GO:0048856 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051239 GO:0051273 GO:0051274 GO:0051641 GO:0051704 GO:0051707 GO:0052324 GO:0052541 GO:0055028 GO:0060548 GO:0060560 GO:0065007 GO:0070589 GO:0070592 GO:0070647 GO:0070696 GO:0070727 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0072697 GO:0072698 GO:0072699 GO:0098542 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:0140096 GO:1901564 GO:1901576 GO:1902494 GO:1990234 GO:1990778 GO:2000026 GO:2000028 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1574

Amino Acids

169.96

Weight (kDa)

5.23

Isoelectric Point (pI)

37.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_ARMC5 PF24768 50 - 225 2.4e-08 ARMC5
ARM_ARMC5 PF24768 704 - 834 9.8e-06 ARMC5
C2 PF00168 1447 - 1545 6.3e-13 C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 4292
AccB1I GGYRCC 1 cut(s) 1886
AccB7I CCANNNNNTGG 2 cut(s) 1615, 3195
AccI GTMKAC 1 cut(s) 4617
AccII CGCG 1 cut(s) 1272
AccIII TCCGGA 1 cut(s) 2303
AciI CCGC 8 cut(s) 279, 910, 975, 1270, 1543, 2285, 2319, 3131
AcoI YGGCCR 3 cut(s) 825, 1617, 3197
AcsI RAATTY 4 cut(s) 1666, 2308, 3802, 3926
AcuI CTGAAG 5 cut(s) 923, 1485, 1980, 2040, 4269
AfiI CCNNNNNNNGG 6 cut(s) 916, 1276, 1615, 3195, 4378, 4514
AhlI ACTAGT 1 cut(s) 2923
AjnI CCWGG 5 cut(s) 591, 1882, 2210, 2571, 4333
AjuI GAANNNNNNNTTGG 2 cut(s) 1062, 1094
AloI GAACNNNNNNTCC 4 cut(s) 891, 923, 2847, 2879
Alw21I GWGCWC 7 cut(s) 424, 714, 1119, 1486, 1972, 2164, 3975
Alw26I GTCTC 9 cut(s) 234, 304, 933, 1858, 2398, 3669, 3888, 4183, 4233
Alw44I GTGCAC 1 cut(s) 1482
AlwNI CAGNNNCTG 5 cut(s) 545, 1676, 2840, 3212, 3616
Ama87I CYCGRG 1 cut(s) 408
Aor13HI TCCGGA 1 cut(s) 2303
AoxI GGCC 4 cut(s) 135, 825, 1617, 3197
ApaLI GTGCAC 1 cut(s) 1482
ApoI RAATTY 4 cut(s) 1666, 2308, 3802, 3926
ArsI GACNNNNNNTTYG 4 cut(s) 303, 335, 1979, 2011
AseI ATTAAT 4 cut(s) 90, 1169, 3737, 4029
Asp700I GAANNNNTTC 4 cut(s) 2311, 2793, 3078, 4254
AspLEI GCGC 1 cut(s) 1564
AspS9I GGNCC 6 cut(s) 136, 2691, 3493, 4014, 4427, 4695
AsuHPI GGTGA 6 cut(s) 128, 716, 1010, 1369, 1597, 4057
AsuNHI GCTAGC 1 cut(s) 2654
AvaI CYCGRG 1 cut(s) 408
AvaII GGWCC 5 cut(s) 2691, 3493, 4014, 4427, 4695
BaeGI GKGCMC 4 cut(s) 673, 1486, 1891, 4509
BalI TGGCCA 3 cut(s) 827, 1619, 3199
BamHI GGATCC 2 cut(s) 1022, 1820
BanI GGYRCC 1 cut(s) 1886
BanII GRGCYC 6 cut(s) 1972, 2006, 2164, 3975, 4051, 4132
BbsI GAAGAC 2 cut(s) 446, 2370
Bbv12I GWGCWC 7 cut(s) 424, 714, 1119, 1486, 1972, 2164, 3975
BbvCI CCTCAGC 1 cut(s) 3264
BccI CCATC 9 cut(s) 629, 1126, 1922, 2067, 3025, 3035, 3189, 4268, 4652
BcgI CGANNNNNNTGC 4 cut(s) 384, 418, 3680, 3714
BciT130I CCWGG 5 cut(s) 593, 1884, 2212, 2573, 4335
BciVI GTATCC 2 cut(s) 1453, 3558
BclI TGATCA 3 cut(s) 724, 1771, 2712
BcoDI GTCTC 9 cut(s) 234, 304, 933, 1858, 2398, 3669, 3888, 4183, 4233
BcuI ACTAGT 1 cut(s) 2923
BfmI CTRYAG 5 cut(s) 537, 582, 642, 2523, 3477
BfuAI ACCTGC 1 cut(s) 4292
BfuI GTATCC 2 cut(s) 1453, 3558
BglI GCCNNNNNGGC 1 cut(s) 80
BglII AGATCT 2 cut(s) 1016, 3980
BmcAI AGTACT 3 cut(s) 627, 1140, 3335
Bme1390I CCNGG 5 cut(s) 593, 1884, 2212, 2573, 4335
Bme18I GGWCC 5 cut(s) 2691, 3493, 4014, 4427, 4695
BmeT110I CYCGRG 1 cut(s) 408
BmgT120I GGNCC 6 cut(s) 136, 2691, 3493, 4014, 4427, 4695
BmiI GGNNCC 7 cut(s) 1024, 1354, 1822, 1888, 2693, 3348, 4129
BmrFI CCNGG 5 cut(s) 593, 1884, 2212, 2573, 4335
BmrI ACTGGG 2 cut(s) 1603, 4580
BmtI GCTAGC 1 cut(s) 2658
BmuI ACTGGG 2 cut(s) 1603, 4580
BpiI GAAGAC 2 cut(s) 446, 2370
BplI GAGNNNNNCTC 2 cut(s) 1394, 1426
BpmI CTGGAG 5 cut(s) 1413, 1878, 1986, 2375, 3240
Bpu10I CCTNAGC 3 cut(s) 3264, 4077, 4155
BpuEI CTTGAG 6 cut(s) 252, 1163, 1421, 1442, 1882, 2762
Bsa29I ATCGAT 1 cut(s) 4593
BsaAI YACGTR 3 cut(s) 1708, 4491, 4670
BsaBI GATNNNNATC 2 cut(s) 1021, 2202
BsaI GGTCTC 4 cut(s) 234, 933, 1858, 3669
BsaJI CCNNGG 7 cut(s) 591, 863, 1027, 2391, 4092, 4236, 4443
BsaWI WCCGGW 2 cut(s) 2303, 2688
BsaXI ACNNNNNCTCC 2 cut(s) 4509, 4539
Bsc4I CCNNNNNNNGG 6 cut(s) 916, 1276, 1615, 3195, 4378, 4514
Bse3DI GCAATG 7 cut(s) 727, 1659, 2912, 3579, 3794, 3914, 4324
Bse8I GATNNNNATC 2 cut(s) 1021, 2202
BseAI TCCGGA 1 cut(s) 2303
BseBI CCWGG 5 cut(s) 593, 1884, 2212, 2573, 4335
BseCI ATCGAT 1 cut(s) 4593
BseDI CCNNGG 7 cut(s) 591, 863, 1027, 2391, 4092, 4236, 4443
BseJI GATNNNNATC 2 cut(s) 1021, 2202
BseLI CCNNNNNNNGG 6 cut(s) 916, 1276, 1615, 3195, 4378, 4514
BseMI GCAATG 7 cut(s) 727, 1659, 2912, 3579, 3794, 3914, 4324
BseMII CTCAG 5 cut(s) 1562, 2175, 3278, 3321, 4169
BseRI GAGGAG 3 cut(s) 1098, 1204, 4422
BseSI GKGCMC 4 cut(s) 673, 1486, 1891, 4509
BseYI CCCAGC 2 cut(s) 2531, 3902
BsgI GTGCAG 4 cut(s) 531, 1125, 2397, 4444
Bsh1236I CGCG 1 cut(s) 1272
BshFI GGCC 4 cut(s) 137, 827, 1619, 3199
BshNI GGYRCC 1 cut(s) 1886
BshVI ATCGAT 1 cut(s) 4593
BsiHKAI GWGCWC 7 cut(s) 424, 714, 1119, 1486, 1972, 2164, 3975
BsiHKCI CYCGRG 1 cut(s) 408
BsiSI CCGG 2 cut(s) 2304, 2689
BslFI GGGAC 3 cut(s) 1277, 2913, 4530
BslI CCNNNNNNNGG 6 cut(s) 916, 1276, 1615, 3195, 4378, 4514
BsmAI GTCTC 9 cut(s) 234, 304, 933, 1858, 2398, 3669, 3888, 4183, 4233
BsmFI GGGAC 3 cut(s) 1277, 2913, 4530
BsmI GAATGC 5 cut(s) 664, 1265, 3376, 4110, 4710
BsnI GGCC 4 cut(s) 137, 827, 1619, 3199
Bso31I GGTCTC 4 cut(s) 234, 933, 1858, 3669
BsoBI CYCGRG 1 cut(s) 408
Bsp13I TCCGGA 1 cut(s) 2303
Bsp19I CCATGG 1 cut(s) 863
BspACI CCGC 8 cut(s) 279, 910, 975, 1270, 1543, 2285, 2319, 3131
BspANI GGCC 4 cut(s) 137, 827, 1619, 3199
BspCNI CTCAG 5 cut(s) 1563, 2176, 3277, 3322, 4168
BspDI ATCGAT 1 cut(s) 4593
BspEI TCCGGA 1 cut(s) 2303
BspFNI CGCG 1 cut(s) 1272
BspHI TCATGA 2 cut(s) 2167, 3427
BspLI GGNNCC 7 cut(s) 1024, 1354, 1822, 1888, 2693, 3348, 4129
BspMAI CTGCAG 2 cut(s) 541, 586
BspMI ACCTGC 1 cut(s) 4292
BspOI GCTAGC 1 cut(s) 2658
BspQI GCTCTTC 2 cut(s) 2169, 2782
BspT107I GGYRCC 1 cut(s) 1886
BspTNI GGTCTC 4 cut(s) 234, 933, 1858, 3669
BsrDI GCAATG 7 cut(s) 727, 1659, 2912, 3579, 3794, 3914, 4324
BssECI CCNNGG 7 cut(s) 591, 863, 1027, 2391, 4092, 4236, 4443
BssNAI GTATAC 1 cut(s) 4618
BssT1I CCWWGG 4 cut(s) 863, 1027, 2391, 4443
Bst1107I GTATAC 1 cut(s) 4618
Bst2UI CCWGG 5 cut(s) 593, 1884, 2212, 2573, 4335
Bst6I CTCTTC 6 cut(s) 1508, 1740, 2169, 2396, 2782, 4029
BstAPI GCANNNNNTGC 4 cut(s) 545, 668, 3791, 3899
BstBAI YACGTR 3 cut(s) 1708, 4491, 4670
BstC8I GCNNGC 9 cut(s) 1831, 2583, 2656, 2722, 2919, 3699, 3746, 3834, 3909
BstDSI CCRYGG 2 cut(s) 863, 4236
BstENI CCTNNNNNAGG 1 cut(s) 4376
BstFNI CGCG 1 cut(s) 1272
BstHHI GCGC 1 cut(s) 1564
BstMAI GTCTC 9 cut(s) 234, 304, 933, 1858, 2398, 3669, 3888, 4183, 4233
BstNI CCWGG 5 cut(s) 593, 1884, 2212, 2573, 4335
BstNSI RCATGY 2 cut(s) 2242, 3729
BstSCI CCNGG 5 cut(s) 591, 1882, 2210, 2571, 4333
BstSFI CTRYAG 5 cut(s) 537, 582, 642, 2523, 3477
BstSLI GKGCMC 4 cut(s) 673, 1486, 1891, 4509
BstSNI TACGTA 1 cut(s) 1708
BstUI CGCG 1 cut(s) 1272
BstV2I GAAGAC 2 cut(s) 446, 2370
BstX2I RGATCY 7 cut(s) 187, 1016, 1022, 1820, 1855, 3980, 4661
BstXI CCANNNNNNTGG 2 cut(s) 1312, 3038
BstYI RGATCY 7 cut(s) 187, 1016, 1022, 1820, 1855, 3980, 4661
BstZ17I GTATAC 1 cut(s) 4618
Bsu15I ATCGAT 1 cut(s) 4593
BsuI GTATCC 2 cut(s) 1453, 3558
BsuRI GGCC 4 cut(s) 137, 827, 1619, 3199
BsuTUI ATCGAT 1 cut(s) 4593
BtgI CCRYGG 2 cut(s) 863, 4236
BtsI GCAGTG 6 cut(s) 1133, 1484, 1639, 2592, 4150, 4456
BveI ACCTGC 1 cut(s) 4292
Cac8I GCNNGC 9 cut(s) 1831, 2583, 2656, 2722, 2919, 3699, 3746, 3834, 3909
CaiI CAGNNNCTG 5 cut(s) 545, 1676, 2840, 3212, 3616
CciI TCATGA 2 cut(s) 2167, 3427
CfoI GCGC 1 cut(s) 1564
Cfr13I GGNCC 6 cut(s) 136, 2691, 3493, 4014, 4427, 4695
ClaI ATCGAT 1 cut(s) 4593
CseI GACGC 2 cut(s) 1985, 2111
CsiI ACCWGGT 3 cut(s) 1882, 2571, 4333
DraI TTTAAA 3 cut(s) 1161, 2368, 2964
EaeI YGGCCR 3 cut(s) 825, 1617, 3197
Eam1104I CTCTTC 6 cut(s) 1508, 1740, 2169, 2396, 2782, 4029
EarI CTCTTC 6 cut(s) 1508, 1740, 2169, 2396, 2782, 4029
Ecl136II GAGCTC 3 cut(s) 1970, 2162, 3973
Eco105I TACGTA 1 cut(s) 1708
Eco130I CCWWGG 4 cut(s) 863, 1027, 2391, 4443
Eco24I GRGCYC 6 cut(s) 1972, 2006, 2164, 3975, 4051, 4132
Eco31I GGTCTC 4 cut(s) 234, 933, 1858, 3669
Eco47I GGWCC 5 cut(s) 2691, 3493, 4014, 4427, 4695
Eco53kI GAGCTC 3 cut(s) 1970, 2162, 3973
Eco57I CTGAAG 5 cut(s) 923, 1485, 1980, 2040, 4269
Eco88I CYCGRG 1 cut(s) 408
EcoICRI GAGCTC 3 cut(s) 1970, 2162, 3973
EcoNI CCTNNNNNAGG 1 cut(s) 4376
EcoRII CCWGG 5 cut(s) 591, 1882, 2210, 2571, 4333
EcoT14I CCWWGG 4 cut(s) 863, 1027, 2391, 4443
EcoT22I ATGCAT 3 cut(s) 664, 772, 3280
EcoT38I GRGCYC 6 cut(s) 1972, 2006, 2164, 3975, 4051, 4132
ErhI CCWWGG 4 cut(s) 863, 1027, 2391, 4443
FaqI GGGAC 3 cut(s) 1277, 2913, 4530
FauI CCCGC 2 cut(s) 968, 3124
FauNDI CATATG 1 cut(s) 4056
FbaI TGATCA 3 cut(s) 724, 1771, 2712
FblI GTMKAC 1 cut(s) 4617
FriOI GRGCYC 6 cut(s) 1972, 2006, 2164, 3975, 4051, 4132
GlaI GCGC 1 cut(s) 1563
GsaI CCCAGC 2 cut(s) 2535, 3906
GsuI CTGGAG 5 cut(s) 1413, 1878, 1986, 2375, 3240
HaeIII GGCC 4 cut(s) 137, 827, 1619, 3199
HapII CCGG 2 cut(s) 2304, 2689
HgaI GACGC 2 cut(s) 1985, 2111
HhaI GCGC 1 cut(s) 1564
Hin6I GCGC 1 cut(s) 1562
HinP1I GCGC 1 cut(s) 1562
HincII GTYRAC 4 cut(s) 2236, 2331, 4203, 4566
HindII GTYRAC 4 cut(s) 2236, 2331, 4203, 4566
HindIII AAGCTT 5 cut(s) 59, 365, 1245, 1418, 3742
HpaII CCGG 2 cut(s) 2304, 2689
HphI GGTGA 6 cut(s) 128, 716, 1010, 1369, 1597, 4057
HpyCH4IV ACGT 3 cut(s) 1707, 4490, 4669
HpySE526I ACGT 3 cut(s) 1707, 4490, 4669
HspAI GCGC 1 cut(s) 1562
Kpn2I TCCGGA 1 cut(s) 2303
Ksp22I TGATCA 3 cut(s) 724, 1771, 2712
LguI GCTCTTC 2 cut(s) 2169, 2782
LmnI GCTCC 7 cut(s) 979, 1085, 1217, 1967, 4086, 4127, 4530
MabI ACCWGGT 3 cut(s) 1882, 2571, 4333
MaeII ACGT 3 cut(s) 1707, 4490, 4669
MaeIII GTNAC 7 cut(s) 116, 323, 1703, 1732, 3534, 4348, 4579
MfeI CAATTG 5 cut(s) 519, 680, 2463, 2820, 2847
MflI RGATCY 7 cut(s) 187, 1016, 1022, 1820, 1855, 3980, 4661
MlsI TGGCCA 3 cut(s) 827, 1619, 3199
MluNI TGGCCA 3 cut(s) 827, 1619, 3199
MlyI GAGTC 1 cut(s) 113
MmeI TCCRAC 8 cut(s) 1060, 1798, 2538, 2596, 3471, 3600, 4149, 4722
Mox20I TGGCCA 3 cut(s) 827, 1619, 3199
Mph1103I ATGCAT 3 cut(s) 664, 772, 3280
MroI TCCGGA 1 cut(s) 2303
MroXI GAANNNNTTC 4 cut(s) 2311, 2793, 3078, 4254
MscI TGGCCA 3 cut(s) 827, 1619, 3199
MslI CAYNNNNRTG 3 cut(s) 1382, 2419, 3513
Msp20I TGGCCA 3 cut(s) 827, 1619, 3199
MspA1I CMGCKG 5 cut(s) 912, 2522, 2837, 3293, 3992
MspI CCGG 2 cut(s) 2304, 2689
MspR9I CCNGG 5 cut(s) 593, 1884, 2212, 2573, 4335
MunI CAATTG 5 cut(s) 519, 680, 2463, 2820, 2847
Mva1269I GAATGC 5 cut(s) 664, 1265, 3376, 4110, 4710
MvaI CCWGG 5 cut(s) 593, 1884, 2212, 2573, 4335
MvnI CGCG 1 cut(s) 1272
NcoI CCATGG 1 cut(s) 863
NdeI CATATG 1 cut(s) 4056
NheI GCTAGC 1 cut(s) 2654
NlaIV GGNNCC 7 cut(s) 1024, 1354, 1822, 1888, 2693, 3348, 4129
NmuCI GTSAC 3 cut(s) 116, 323, 4579
NsiI ATGCAT 3 cut(s) 664, 772, 3280
NspI RCATGY 2 cut(s) 2242, 3729
PaeR7I CTCGAG 1 cut(s) 408
PagI TCATGA 2 cut(s) 2167, 3427
PciSI GCTCTTC 2 cut(s) 2169, 2782
PctI GAATGC 5 cut(s) 664, 1265, 3376, 4110, 4710
PdmI GAANNNNTTC 4 cut(s) 2311, 2793, 3078, 4254
PflMI CCANNNNNTGG 2 cut(s) 1615, 3195
PleI GAGTC 1 cut(s) 113
PpsI GAGTC 1 cut(s) 113
Ppu21I YACGTR 3 cut(s) 1708, 4491, 4670
PshBI ATTAAT 4 cut(s) 90, 1169, 3737, 4029
Psp124BI GAGCTC 3 cut(s) 1972, 2164, 3975
Psp6I CCWGG 5 cut(s) 591, 1882, 2210, 2571, 4333
PspFI CCCAGC 2 cut(s) 2531, 3902
PspGI CCWGG 5 cut(s) 591, 1882, 2210, 2571, 4333
PspN4I GGNNCC 7 cut(s) 1024, 1354, 1822, 1888, 2693, 3348, 4129
PspPI GGNCC 6 cut(s) 136, 2691, 3493, 4014, 4427, 4695
PspXI VCTCGAGB 1 cut(s) 408
PsrI GAACNNNNNNTAC 4 cut(s) 839, 871, 1336, 1368
PstI CTGCAG 2 cut(s) 541, 586
PstNI CAGNNNCTG 5 cut(s) 545, 1676, 2840, 3212, 3616
PsuI RGATCY 7 cut(s) 187, 1016, 1022, 1820, 1855, 3980, 4661
PvuII CAGCTG 4 cut(s) 2522, 2837, 3293, 3992
RseI CAYNNNNRTG 3 cut(s) 1382, 2419, 3513
SacI GAGCTC 3 cut(s) 1972, 2164, 3975
SapI GCTCTTC 2 cut(s) 2169, 2782
Sau96I GGNCC 6 cut(s) 136, 2691, 3493, 4014, 4427, 4695
ScaI AGTACT 3 cut(s) 627, 1140, 3335
SchI GAGTC 1 cut(s) 113
ScrFI CCNGG 5 cut(s) 593, 1884, 2212, 2573, 4335
SexAI ACCWGGT 3 cut(s) 1882, 2571, 4333
SfcI CTRYAG 5 cut(s) 537, 582, 642, 2523, 3477
Sfr274I CTCGAG 1 cut(s) 408
SinI GGWCC 5 cut(s) 2691, 3493, 4014, 4427, 4695
SlaI CTCGAG 1 cut(s) 408
SmiMI CAYNNNNRTG 3 cut(s) 1382, 2419, 3513
SmlI CTYRAG 7 cut(s) 267, 408, 1142, 1400, 1421, 1861, 2741
SmoI CTYRAG 7 cut(s) 267, 408, 1142, 1400, 1421, 1861, 2741
SnaBI TACGTA 1 cut(s) 1708
SpeI ACTAGT 1 cut(s) 2923
SsiI CCGC 8 cut(s) 279, 910, 975, 1270, 1543, 2285, 2319, 3131
SspI AATATT 3 cut(s) 2049, 2373, 2932
SstI GAGCTC 3 cut(s) 1972, 2164, 3975
StyD4I CCNGG 5 cut(s) 591, 1882, 2210, 2571, 4333
StyI CCWWGG 4 cut(s) 863, 1027, 2391, 4443
TaiI ACGT 3 cut(s) 1710, 4493, 4672
TaqI TCGA 8 cut(s) 409, 890, 921, 2015, 2604, 4435, 4593, 4683
TatI WGTACW 5 cut(s) 163, 625, 1138, 2428, 3333
TauI GCSGC 1 cut(s) 281
TseFI GTSAC 3 cut(s) 116, 323, 4579
Tsp45I GTSAC 3 cut(s) 116, 323, 4579
TspGWI ACGGA 1 cut(s) 4225
Van91I CCANNNNNTGG 2 cut(s) 1615, 3195
VneI GTGCAC 1 cut(s) 1482
VpaK11BI GGWCC 5 cut(s) 2691, 3493, 4014, 4427, 4695
VspI ATTAAT 4 cut(s) 90, 1169, 3737, 4029
XagI CCTNNNNNAGG 1 cut(s) 4376
XapI RAATTY 4 cut(s) 1666, 2308, 3802, 3926
XceI RCATGY 2 cut(s) 2242, 3729
XhoI CTCGAG 1 cut(s) 408
XmiI GTMKAC 1 cut(s) 4617
XmnI GAANNNNTTC 4 cut(s) 2311, 2793, 3078, 4254
ZrmI AGTACT 3 cut(s) 627, 1140, 3335
Zsp2I ATGCAT 3 cut(s) 664, 772, 3280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.