Rw6G032450

Protein kinase C conserved region 2 (CalB)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0009147
Physical Location & Seq
Reverse (-)
56598118 .. 56608141
10024 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G032450.1

Sequence Viewer

Length: 6471 bp
ATGAAAAAAGGTGAAAAAAAAAAAGAAAAAAAAAACGAAAATGGGGAACAGAGAGAACAAACAAATATGCACACACATGGAAAGGAAACGAAAAGACTGGGACTCGCTGCTCTCTGTGTCACTCTGGATTTAGATGAAACAACAATGGATGATGAAGAAGGTACAATGGCAAGTGTTGCTGAATTTGTTGAGAAACTACATGCCAGCATGTCTTCACCGCATGAAAAAGAACTTATTACAGCACGTCTGCTAGGTATTGCCAAAGCAAGGAAGGATGCAAGAACAATTATTGGTTCACATTCCCAGGCTATGCCATTGTTCATAAATATTCTGAGGAGTGGCACCCCTGTTGCAAAGGTTAATGTTGCGGCAACTCTGAGTGTCCTGTGCAAAGATGAAGACTTGCGTCTTAAAGTACTTCTAGGGGGGTGCATCCCCCCGTTACTCTCACTTTTGAAGTCTGAATCAACTGAGGCCAGGAAGGCTGCAGCCGAAGCTATATATGAAGTTTCCTCTGGTGGGCTTTCAGATGATCACGTTGGCATAAAAATATTTATTACAGAAGGTGTTGTACCAAACTTGTGGAATCAGCTCAATCCAAACAGCAACCAGGACAAAGTGGTAGAGGGATTTGTGACAGGGGCTTTAAGAAATCTCTGTGGTGACAAGGATGGCTACTGGAGAGCAACACTTGAGGCTGGTGGAGTAGATATCACTGTGGGTCTCCTGTATTCTGACAATGTGGCTGCCCAATCCAATGCTGCGTCCCTTTTGGCCCGTCTCATGTTGGCTTTCAGTGATAGCATTCCCAAAGTAATAGATTCTGGAGCTGTCAAAGCTTTGCTTCGGCTCGTGGGTCAAGAAAATAATGTTTCTGTTCGTGCTAGTGCTGCTGATGCTCTGGAAGCTCTTTCTTCAAAGTCAACTGGTGCTAAGAAAGCTATTGTTGATGCAAATGGTCTTCCAGTTCTGATTGGAGCTATTGTTGCTCCATCTAAGGAGTGCATGCAAGGTGAGTGCGGGCAGGCTCTCCAGGAGCATTCAACAAGGGCTTTAGCAAATATTTGTGGTGGGGTGTCTGCTTTGATACTTTATCTTGGAGAGCTTTCACAGTCAGCTCGCCTAGCTGCCCCAGTTGCTGATATTATTGGAGCTCTTGCATACACTTTAATGGTCTTTGAGCAAAAATCTGGTGATGGTAAGGAATCTTTTAAGGTAACAAAGATAGAGGATATTCTTGTGATGCTGCTAAAGCCTCGTGATAATAAGCTTGTTCAAGAGCGTGTCCTTGAGGCCATGGCTAGTCTATATGGCAACATTCATCTCTCAAAATGGCTCAATCATGCAGAAGCGAAGAAGGTGCTTATTGGACTTATAACAATGGCTGCTGCTGATGTACAAGAGTCTCTGATACTCTCTTTGACAAGCTTATGCTGTGATGGTGTTGGAATCTGGGAGTCCATTGGCGAGAGAGAAGGAATTCAGCTACTTATTTCATTGCTTGGCTTATCCAGTGAGCAGCATCAAGAATATGCTGTTCAGTTGCTAGGGATCTTAACTGACCAGGTTGATGACAGCAAGTGGGCTATTACTGCTGCTGGTGGGATTCCTCCTCTAGTGCAGTTGTTAGAGACGGGATCGCAAAAGGCGAAGGAGGACGCTGCTCATGTGTTGTGGAACTTGTGCTGTCACAGTGAGGATATTCGTGCATGTGTTGAAAGTGCAGGAGCCATTCCAGCATTTTTATGGCTTCTAAAAAGTGGTGGATCAAGGGGGCAAGAAGCATCAGCTATGGCACTTACAAAGCTTATCCGAACAGCCGATTCGGCTACCATTAATCAGTTGTTAGCTTTGCTCTTAGGTGACTCTCCATGCTCAAAGGCCCATACTATCAGGGTGTTGGGTCATGTACTCACAATGGCATCACACAAGGATCTTGTGCATAAGGGTTCAGCAGCTAATAAAGGGTTGAGGTCTCTCGTTCAGGTTCTCAACTCATCAAATGAAGAAACTCAAGAGTATGCCGCGTCTGTCTTAGCTGATCTATTCAGCATGAGACAAGATATTTGTGACACTCTTGCAACTGATGAGATCGTGCATCCTTGCATGAAGCTTTTGACCAGCAGCACACAAGCTGTTGCAACACAGTCGGCTCGAGCTTTGGGTGCTCTTTCCCGTCCTATGAAGACCAAAACAATAAGCAAGATGTCTTATATTGCAGAAGGGGATGTTAAACCCCTCATCAAACTAGCAAAAACTTCTTCAATTGATGCTGCTCAAACTGCAGTTGCTGCCCTCGCCAATCTTCTCTCTGATCCCCAGATCGCTGCAGAAGCCCTGGCAGAAGATGTTGTTTCAGCTTTGATAAGAGTACTTGGAGATGGAACTACAGAAGGTAAAAAGAATGCATCCCGTGCCCTTCATCAATTGTTGAAGCATTTTCCAGTAGGTGATGTGCTCACAGGAAATGCTCATTGCCATTATGCTATTCTTGCTGTTGTTGATTCCTTAAATGCATTGGATATGGATGAGACTGATGCTGCTGATGCTTTAGAAGTAGTAGCACTTTTGGCCAGAACCAAACAGGGTGTGAACTTCACTGACCCTCCATGGTCTGTATTTGCTGAAGTTGAATCGAGCTTAGAACCTCTTGTCCGCTGTCTGGCCGAAGGGTCTCCTTTGCTTCAGGATAAGGCAATAGAAGTTTTGTCTAGGCTTTGCGGGGAGCAACCAGTTGTGCTTGGTGATCTATTGATTGCAAGATCTGGATCCCTTGGTTCACTAGCTAACAGAATAATGAACTCATCTAGTTTAGAAGTCAGAGTTGGAGGAGCTGCATTACTCATTTGTGCAGCAAAAGAGCACAAAGAGCAGTGGATGGAAGTCCTTGAGGTGTCAGGATATTTAAAACCATTAATGTATGCTTTAGTGGATATGATGAAGCAAAATTGTAGCTGCTCCTCTTTAGAAATTGAAGTCCGAACTTCTAAAGCTTTTATGGAAAGAACTGCATTCCACGAAGGGGATGAGTTTGATGTCCCTGATCCAGCCATTGTCTTGGGGGGTACTGTTGCTTTGTGGTTGCTATGTATAATTGGTTCCTGTAATGCAAAGAGCAAACTCACCATTATGGAAGCCGGAGGTCTCGAGGCTCTCTCTGACAAGCTTGAGAGCCACACTTCCAATCCACAGGCAGATTATGAGGATACTGAAGGTATATGGATTAGTGCCCTGCTTCTGGCTATTCTCTTCCAAGATGCCAATGTCGTTTCATCTCCTACAACAATGCGGATCATAGCTTCTCTTGCGCTTCTGCTGAGATCAGATGAGGTGATTGATAGGTTCTTTGCTGCCCAGTCAATGGCCAGTCTTGTTTGCATTGGTAATAAGGGAATAATTCTTGCCATTGCAAATTCAGGTGCTGTTGCTGGATTGATAACCCTCATTGGTTATGTAGAATCGGATATGCCTAACCTTGTTACTTTATCAGAAGAGTTTTCTCTGGTGCGAAACCCTGATCAAGTTGTTTTGGAATACCTTTTTGATTTTGAAGATGTAAGAGTTGGATCCACAGCACGCAAATCTATACCTCTCTTGGTGGATCTCTTGAGACCAATGCCAGATAGACCTGGTGCCCCTCCAGTTGCTCTTAAACTCTTGACCTGTATTGCTGATGGAAGTGATACAAACAAATTAGTCATGGCTGAAGCTGGAGCTCTGGACGCTCTGACAAAGTACCTGTCTTTGAGCCCACAAGATTCTACTGAAGCTGCAATATCTGATTTATTCAGAATATTGTTTAGCCATCCTGATCTGATTCGCTATGAAGCATCAGCTAGTTCGTTGAATCAGCTCATAGCTGTTCTGCGTCTGGGGTCAAGAAATGCTAGATACAGTGCTGCAAGAGCTCTTCACGAACTATTTGATGCTCAGAACATCAGAAATTCTGATTTAGCCAGGCAATCTGTTCAGCCATTGGTTGACATGCTTAATGCTGCATCAGAAAATGAACAAGAGGCTGCTCTTGTTGCGGTAATTAAGCTGACTTCCGGAAATTCTTCTACCGCAGCTTTGTTGACTGATGTGGAGGGAAATCCACTGGAGAGTTTATTTAAAATATTGTCTTCTGCTTCATCCTTGGATTTGAAGAGACTTGCTGCACAGCTATGTTGTGTACTGTTTGATAGTACCAAAGTCAGAGGAAATCCAATTGCCTCTGACTGTATAGAGCCTCTTATTTCCTTGATGCTTTCTGGTATTAATGCAGCTGTAGAAGCTGGGGTTTGTGCCTTTGAAAAATTGTTGGATGATGAACACCAGGTAGAGCTTGCAGTGAACTATAATGTTGTCGATCTTCTTGTTGGATTAGTTTCTGGTACGAACAGTCAGCTCATTGAGGCTAGCATCTGCTCTCTCATAAAGTTGGGGAAAGACCGGACCCAATGCAAATCGGATATGATCAATGCTGGCATTATTGATAACTGTCTTGAGCTACTCCCTGTTGCAGCCAGTTCATTATGCTCTTCTATTGCTGAATTATTTCGCATTTTGACAAATAGTGATGCAATTGCTAGAAGTTCAGCTGCTGCAACAATTGTTGAACCTCTTTTCCTAGTTTTACTTCGTCCAGATTTCAGTATGTGGGGACAGCACAGTGCATTGCAAGCACTAGTAAATATTTTGGAGAAGCCACAAAGCCTTGCCACTTTAAAACTTACGCCTAGCCAAGTCATTGAGCCTCTGATTTCATTTCTTGAATCCCCATCTCTAGCCATCCAGCAGCTTGGTACAGAATTGCTATCTCATCTTCTTGCACAAGAACATTTTCAGCAAGATATTACAACAAAAAATGCTGTTGTTCCTCTTGTGCAACTTGCGGGAATTGGAATACTGAACTTACAGCAAACAGCGATAAAGGCATTGGAAAAAATATCCACAAGATGGCCAAAGGCAGTTGCTGATGCTGGAGGTATTTTTGAGCTTGGAAAGGTTATTATACAAGATGATCCTCAGCCACCTCATGCATTGTGGGAATCAGCTGCTTTAGTTCTCTCAAATGTTTTGTGCTTCAATGCTGAGTACTACTTTAAGGTTCCTGTGGTGGTTCTTGTTAAAATGTTGCATTCAACAGTGGATAGCACTATTACGGTGGCTCTCAATGCACTGCTTGTTCATGAAAGGAGTGATAAGCTAAGTGCTGAACAGATGACTGAAAATGGTGCAATAGATGCCTTGTTGGACCTTTTAACATCTCATCAGTGTGAAGAAGCATCTGGAAGGTTACTTGAAGCGTTATTCAACAATGTCAGCATACGAGCAATGAAGGTTTCCAAGTATGCAATAGCACCTTTATCACAGTATCTGTTGGATTCACAAACCAAATCACAATCTGGAAAACTTCTTGTAGCTCTAGCTCTTGGAGACCTTTCCCAACACGAAGGGCTTGCTAGAGCCAGTGATTCTGTTTCTGCATGTCGGGCATTAATAAGCTTGCTTGAAGATCAGCCCACAGAAGATATGAAAATGGTGGCAATTTGTGCATTGCAAAATTTTGTCATGAACAGCCGAACGAATCGGCGTGCGGTCGCAGAAGCAGGGGGAATACTGGTTATTCAAGAACTACTACTGTCTCTCAATGCAGAAGTTGCTGGGCAAGCAGCATTGCTTATCAAATTTTTGTTTTCTAATCACACACTTCAAGAATATGTGTCAAACGAGCTCATCAGATCTTTGACAGCCGCATTAGAGAGAGAGTTGTGGTCCACAGCAACTATTAATGAAGAGGTTTTGAGAGCCCTACATATGATATTCACCAACTTTCCTAAGCTCCATATTTCCGAGGCAGCCACTCTCTGCATTCCCAATCTGATTGGAGCCCTTAAATCTGGCAGTGAGGCAGCTCAGGATGTCGTGTTGGACACCCTTTGCTTGTTGAGACATTCTTGGTCAACCATGCCAATAGATATTGCAAAGTCTCAATCCGTGGTTGCTGCTGAAGCCATTCCCATCTTACAAGTGCTTATGAAAACCTGCCCACCAAGTTTCCATGAGAGAGCAGACAGCCTGTTGCATTGCTTACCAGGTTGTTTGACTGTTACAATCAAGCGTGGAAACAACCTTAAACAGGCTATGGGAGGCACAAATGCTTTTTGCCGATTGACAATAGGCAACGGTCCTCCTCGACAAACCAAGGTAGTGAGCCACAGTACTTCTCCCGAATGGAAAGAAGGGTTTACGTGGGCATTTGATGTGCCCCCGAAGGGACAAAAACTCCACATCATCTGCAAAAGCAAAAATACCTTTGGAAAGTCAACACTGGGGAGAGTGACTATCCAGATCGATAAAGTTGTGTCAGAAGGAGTATACAGTGGATTATTCAGCCTAAACCATGACAACAGCAAAGATGGATCTTCACGTACACTTGAAATCGAGATTATCTGGTCCAACAGAATGCCCGATGATGAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000271 GO:0000902 GO:0002682 GO:0002683 GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005856 GO:0005874 GO:0005881 GO:0005886 GO:0005938 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006807 GO:0006950 GO:0006952 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009664 GO:0009826 GO:0009832 GO:0009987 GO:0010330 GO:0010383 GO:0010941 GO:0015630 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030243 GO:0030244 GO:0030863 GO:0030981 GO:0032446 GO:0032502 GO:0032989 GO:0032991 GO:0033036 GO:0033365 GO:0033612 GO:0033692 GO:0034613 GO:0034637 GO:0034645 GO:0036211 GO:0040007 GO:0042546 GO:0042742 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0044036 GO:0044038 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044380 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045229 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048589 GO:0048856 GO:0048869 GO:0050776 GO:0050777 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051239 GO:0051273 GO:0051274 GO:0051641 GO:0051704 GO:0051707 GO:0052324 GO:0052541 GO:0055028 GO:0060548 GO:0060560 GO:0065007 GO:0070589 GO:0070592 GO:0070647 GO:0070696 GO:0070727 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0072697 GO:0072698 GO:0072699 GO:0098542 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:0140096 GO:1901564 GO:1901576 GO:1902494 GO:1990234 GO:1990778 GO:2000026 GO:2000028 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm C2

Protein Analysis

2156

Amino Acids

231.42

Weight (kDa)

5.3

Isoelectric Point (pI)

36.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_ARMC5 PF24768 401 - 592 2.7e-07 ARMC5
Arm PF00514 525 - 562 2.6e-06 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 632 - 805 1.5e-07 ARMC5
ARM_ARMC5 PF24768 1283 - 1416 1e-05 ARMC5
C2 PF00168 2029 - 2127 5.7e-13 C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1376
Acc36I ACCTGC 1 cut(s) 6038
AccB1I GGYRCC 2 cut(s) 341, 3632
AccB7I CCANNNNNTGG 2 cut(s) 3361, 4941
AccI GTMKAC 1 cut(s) 6363
AccII CGCG 1 cut(s) 2027
AccIII TCCGGA 1 cut(s) 4049
AcoI YGGCCR 4 cut(s) 2571, 2664, 3363, 4943
AcsI RAATTY 7 cut(s) 182, 1479, 3412, 3943, 4054, 5548, 5672
AcuI CTGAAG 6 cut(s) 2646, 2669, 3231, 3726, 3786, 6015
AfiI CCNNNNNNNGG 9 cut(s) 267, 519, 2662, 3022, 3238, 3361, 4941, 6124, 6260
AhlI ACTAGT 1 cut(s) 4669
AjiI CACGTC 1 cut(s) 245
AjuI GAANNNNNNNTTGG 2 cut(s) 2808, 2840
AloI GAACNNNNNNTCC 4 cut(s) 2637, 2669, 4593, 4625
Alw21I GWGCWC 7 cut(s) 1156, 2170, 2460, 2865, 3718, 3910, 5721
AlwNI CAGNNNCTG 6 cut(s) 1139, 2291, 3422, 4586, 4958, 5362
Ama87I CYCGRG 2 cut(s) 2154, 3146
Aor13HI TCCGGA 1 cut(s) 4049
AoxI GGCC 8 cut(s) 474, 774, 1293, 1881, 2571, 2664, 3363, 4943
ApoI RAATTY 7 cut(s) 182, 1479, 3412, 3943, 4054, 5548, 5672
ArsI GACNNNNNNTTYG 4 cut(s) 2049, 2081, 3725, 3757
AseI ATTAAT 5 cut(s) 1836, 2915, 4260, 5483, 5775
Asp700I GAANNNNTTC 5 cut(s) 1479, 4057, 4539, 4824, 6000
AspLEI GCGC 1 cut(s) 3310
AspS9I GGNCC 7 cut(s) 775, 1882, 4437, 5239, 5760, 6173, 6441
AsuNHI GCTAGC 1 cut(s) 4400
AvaI CYCGRG 2 cut(s) 2154, 3146
AvaII GGWCC 5 cut(s) 4437, 5239, 5760, 6173, 6441
BaeGI GKGCMC 4 cut(s) 2419, 3232, 3637, 6255
BalI TGGCCA 3 cut(s) 2573, 3365, 4945
BamHI GGATCC 2 cut(s) 2768, 3566
BanI GGYRCC 2 cut(s) 341, 3632
BanII GRGCYC 7 cut(s) 1156, 3718, 3752, 3910, 5721, 5797, 5878
BarI GAAGNNNNNNTAC 2 cut(s) 555, 587
BauI CACGAG 2 cut(s) 851, 1257
BbsI GAAGAC 5 cut(s) 204, 405, 953, 2192, 4116
Bbv12I GWGCWC 7 cut(s) 1156, 2170, 2460, 2865, 3718, 3910, 5721
BbvCI CCTCAGC 1 cut(s) 5010
BcgI CGANNNNNNTGC 6 cut(s) 1342, 1376, 2130, 2164, 5426, 5460
BciVI GTATCC 1 cut(s) 3199
BclI TGATCA 3 cut(s) 532, 3517, 4458
BcuI ACTAGT 1 cut(s) 4669
BfmI CTRYAG 5 cut(s) 486, 2283, 2328, 2388, 4269
BfuAI ACCTGC 1 cut(s) 6038
BfuI GTATCC 1 cut(s) 3199
BglI GCCNNNNNGGC 2 cut(s) 482, 1826
BglII AGATCT 2 cut(s) 2762, 5726
BmcAI AGTACT 4 cut(s) 417, 2373, 5081, 6208
Bme18I GGWCC 5 cut(s) 4437, 5239, 5760, 6173, 6441
BmeT110I CYCGRG 2 cut(s) 2154, 3146
BmgBI CACGTC 1 cut(s) 245
BmgT120I GGNCC 7 cut(s) 775, 1882, 4437, 5239, 5760, 6173, 6441
BmiI GGNNCC 9 cut(s) 343, 1729, 2770, 3100, 3568, 3634, 4439, 5094, 5875
BmrI ACTGGG 4 cut(s) 107, 1127, 3349, 6326
BmtI GCTAGC 1 cut(s) 4404
BmuI ACTGGG 4 cut(s) 107, 1127, 3349, 6326
BoxI GACNNNNGTC 1 cut(s) 405
BpiI GAAGAC 5 cut(s) 204, 405, 953, 2192, 4116
BplI GAGNNNNNCTC 2 cut(s) 3140, 3172
BpmI CTGGAG 7 cut(s) 700, 846, 1016, 3624, 3732, 4121, 4986
Bpu10I CCTNAGC 3 cut(s) 5010, 5823, 5901
BpuEI CTTGAG 7 cut(s) 713, 1310, 1998, 2909, 3188, 3628, 4508
Bsa29I ATCGAT 1 cut(s) 6339
BsaAI YACGTR 2 cut(s) 6237, 6416
BsaBI GATNNNNATC 1 cut(s) 2767
BsaI GGTCTC 6 cut(s) 728, 1980, 2679, 3149, 3604, 5415
BsaJI CCNNGG 9 cut(s) 303, 1296, 2337, 2609, 2773, 4137, 5838, 5982, 6189
BsaWI WCCGGW 2 cut(s) 4049, 4434
BsaXI ACNNNNNCTCC 6 cut(s) 969, 999, 2590, 2620, 6255, 6285
Bsc4I CCNNNNNNNGG 9 cut(s) 267, 519, 2662, 3022, 3238, 3361, 4941, 6124, 6260
Bse3DI GCAATG 8 cut(s) 1496, 2473, 3405, 4658, 5325, 5540, 5660, 6070
Bse8I GATNNNNATC 1 cut(s) 2767
BseAI TCCGGA 1 cut(s) 4049
BseCI ATCGAT 1 cut(s) 6339
BseDI CCNNGG 9 cut(s) 303, 1296, 2337, 2609, 2773, 4137, 5838, 5982, 6189
BseJI GATNNNNATC 1 cut(s) 2767
BseLI CCNNNNNNNGG 9 cut(s) 267, 519, 2662, 3022, 3238, 3361, 4941, 6124, 6260
BseMI GCAATG 8 cut(s) 1496, 2473, 3405, 4658, 5325, 5540, 5660, 6070
BseMII CTCAG 8 cut(s) 323, 368, 462, 3308, 3944, 5024, 5067, 5915
BseRI GAGGAG 5 cut(s) 349, 1602, 2844, 2950, 6168
BseSI GKGCMC 4 cut(s) 2419, 3232, 3637, 6255
BseYI CCCAGC 2 cut(s) 4277, 5648
BsgI GTGCAG 4 cut(s) 1640, 1743, 2871, 4143
Bsh1236I CGCG 1 cut(s) 2027
Bsh1285I CGRYCG 1 cut(s) 5586
BshFI GGCC 8 cut(s) 476, 776, 1295, 1883, 2573, 2666, 3365, 4945
BshNI GGYRCC 2 cut(s) 341, 3632
BshVI ATCGAT 1 cut(s) 6339
BsiEI CGRYCG 1 cut(s) 5586
BsiHKAI GWGCWC 7 cut(s) 1156, 2170, 2460, 2865, 3718, 3910, 5721
BsiHKCI CYCGRG 2 cut(s) 2154, 3146
BsiSI CCGG 3 cut(s) 3138, 4050, 4435
BslFI GGGAC 5 cut(s) 114, 751, 3023, 4659, 6276
BslI CCNNNNNNNGG 9 cut(s) 267, 519, 2662, 3022, 3238, 3361, 4941, 6124, 6260
BsmBI CGTCTC 2 cut(s) 785, 1625
BsmFI GGGAC 5 cut(s) 114, 751, 3023, 4659, 6276
BsmI GAATGC 7 cut(s) 804, 1039, 2410, 3011, 5122, 5856, 6456
BsnI GGCC 8 cut(s) 476, 776, 1295, 1883, 2573, 2666, 3365, 4945
Bso31I GGTCTC 6 cut(s) 728, 1980, 2679, 3149, 3604, 5415
BsoBI CYCGRG 2 cut(s) 2154, 3146
Bsp13I TCCGGA 1 cut(s) 4049
Bsp1407I TGTACA 1 cut(s) 1396
Bsp19I CCATGG 2 cut(s) 1296, 2609
BspANI GGCC 8 cut(s) 476, 776, 1295, 1883, 2573, 2666, 3365, 4945
BspCNI CTCAG 8 cut(s) 324, 369, 463, 3309, 3943, 5023, 5068, 5914
BspDI ATCGAT 1 cut(s) 6339
BspEI TCCGGA 1 cut(s) 4049
BspFNI CGCG 1 cut(s) 2027
BspHI TCATGA 2 cut(s) 5173, 5556
BspLI GGNNCC 9 cut(s) 343, 1729, 2770, 3100, 3568, 3634, 4439, 5094, 5875
BspMAI CTGCAG 3 cut(s) 490, 2287, 2332
BspMI ACCTGC 1 cut(s) 6038
BspOI GCTAGC 1 cut(s) 4404
BspQI GCTCTTC 2 cut(s) 3915, 4528
BspT107I GGYRCC 2 cut(s) 341, 3632
BspTNI GGTCTC 6 cut(s) 728, 1980, 2679, 3149, 3604, 5415
BsrDI GCAATG 8 cut(s) 1496, 2473, 3405, 4658, 5325, 5540, 5660, 6070
BsrGI TGTACA 1 cut(s) 1396
BssECI CCNNGG 9 cut(s) 303, 1296, 2337, 2609, 2773, 4137, 5838, 5982, 6189
BssNAI GTATAC 1 cut(s) 6364
BssSI CACGAG 2 cut(s) 851, 1257
BssT1I CCWWGG 5 cut(s) 1296, 2609, 2773, 4137, 6189
Bst1107I GTATAC 1 cut(s) 6364
Bst2BI CACGAG 2 cut(s) 851, 1257
Bst6I CTCTTC 6 cut(s) 3254, 3486, 3915, 4142, 4528, 5775
BstAPI GCANNNNNTGC 6 cut(s) 176, 2291, 2414, 5228, 5537, 5645
BstAUI TGTACA 1 cut(s) 1396
BstBAI YACGTR 2 cut(s) 6237, 6416
BstDSI CCRYGG 3 cut(s) 1296, 2609, 5982
BstENI CCTNNNNNAGG 1 cut(s) 6122
BstFNI CGCG 1 cut(s) 2027
BstHHI GCGC 1 cut(s) 3310
BstMCI CGRYCG 1 cut(s) 5586
BstNSI RCATGY 6 cut(s) 203, 211, 1009, 1713, 3988, 5475
BstPAI GACNNNNGTC 1 cut(s) 405
BstSFI CTRYAG 5 cut(s) 486, 2283, 2328, 2388, 4269
BstSLI GKGCMC 4 cut(s) 2419, 3232, 3637, 6255
BstUI CGCG 1 cut(s) 2027
BstV2I GAAGAC 5 cut(s) 204, 405, 953, 2192, 4116
BstX2I RGATCY 8 cut(s) 1551, 1933, 2762, 2768, 3566, 3601, 5726, 6407
BstXI CCANNNNNNTGG 3 cut(s) 582, 3058, 4784
BstYI RGATCY 8 cut(s) 1551, 1933, 2762, 2768, 3566, 3601, 5726, 6407
BstZ17I GTATAC 1 cut(s) 6364
Bsu15I ATCGAT 1 cut(s) 6339
BsuI GTATCC 1 cut(s) 3199
BsuRI GGCC 8 cut(s) 476, 776, 1295, 1883, 2573, 2666, 3365, 4945
BsuTUI ATCGAT 1 cut(s) 6339
BtgI CCRYGG 3 cut(s) 1296, 2609, 5982
BtrI CACGTC 1 cut(s) 245
BtsI GCAGTG 4 cut(s) 2879, 4338, 5162, 5896
BveI ACCTGC 1 cut(s) 6038
CaiI CAGNNNCTG 6 cut(s) 1139, 2291, 3422, 4586, 4958, 5362
CciI TCATGA 2 cut(s) 5173, 5556
CfoI GCGC 1 cut(s) 3310
Cfr13I GGNCC 7 cut(s) 775, 1882, 4437, 5239, 5760, 6173, 6441
ClaI ATCGAT 1 cut(s) 6339
CseI GACGC 6 cut(s) 395, 753, 1667, 2016, 3731, 3857
CsiI ACCWGGT 4 cut(s) 1563, 3628, 4317, 6079
DraI TTTAAA 3 cut(s) 2907, 4114, 4710
EaeI YGGCCR 4 cut(s) 2571, 2664, 3363, 4943
Eam1104I CTCTTC 6 cut(s) 3254, 3486, 3915, 4142, 4528, 5775
EarI CTCTTC 6 cut(s) 3254, 3486, 3915, 4142, 4528, 5775
Ecl136II GAGCTC 4 cut(s) 1154, 3716, 3908, 5719
Eco130I CCWWGG 5 cut(s) 1296, 2609, 2773, 4137, 6189
Eco24I GRGCYC 7 cut(s) 1156, 3718, 3752, 3910, 5721, 5797, 5878
Eco31I GGTCTC 6 cut(s) 728, 1980, 2679, 3149, 3604, 5415
Eco32I GATATC 1 cut(s) 712
Eco47I GGWCC 5 cut(s) 4437, 5239, 5760, 6173, 6441
Eco53kI GAGCTC 4 cut(s) 1154, 3716, 3908, 5719
Eco57I CTGAAG 6 cut(s) 2646, 2669, 3231, 3726, 3786, 6015
Eco88I CYCGRG 2 cut(s) 2154, 3146
EcoICRI GAGCTC 4 cut(s) 1154, 3716, 3908, 5719
EcoNI CCTNNNNNAGG 1 cut(s) 6122
EcoRI GAATTC 1 cut(s) 1479
EcoRV GATATC 1 cut(s) 712
EcoT14I CCWWGG 5 cut(s) 1296, 2609, 2773, 4137, 6189
EcoT22I ATGCAT 3 cut(s) 2410, 2518, 5026
EcoT38I GRGCYC 7 cut(s) 1156, 3718, 3752, 3910, 5721, 5797, 5878
ErhI CCWWGG 5 cut(s) 1296, 2609, 2773, 4137, 6189
Esp3I CGTCTC 2 cut(s) 785, 1625
FalI AAGNNNNNCTT 2 cut(s) 828, 860
FaqI GGGAC 5 cut(s) 114, 751, 3023, 4659, 6276
FauI CCCGC 3 cut(s) 1013, 2714, 4870
FauNDI CATATG 1 cut(s) 5802
FbaI TGATCA 3 cut(s) 532, 3517, 4458
FblI GTMKAC 1 cut(s) 6363
FriOI GRGCYC 7 cut(s) 1156, 3718, 3752, 3910, 5721, 5797, 5878
GlaI GCGC 1 cut(s) 3309
GsaI CCCAGC 2 cut(s) 4281, 5652
GsuI CTGGAG 7 cut(s) 700, 846, 1016, 3624, 3732, 4121, 4986
HaeIII GGCC 8 cut(s) 476, 776, 1295, 1883, 2573, 2666, 3365, 4945
HapII CCGG 3 cut(s) 3138, 4050, 4435
HgaI GACGC 6 cut(s) 395, 753, 1667, 2016, 3731, 3857
HhaI GCGC 1 cut(s) 3310
Hin6I GCGC 1 cut(s) 3308
HinP1I GCGC 1 cut(s) 3308
HincII GTYRAC 5 cut(s) 924, 3982, 4077, 5949, 6312
HindII GTYRAC 5 cut(s) 924, 3982, 4077, 5949, 6312
HindIII AAGCTT 8 cut(s) 837, 1268, 1426, 1805, 2111, 2991, 3164, 5488
HpaII CCGG 3 cut(s) 3138, 4050, 4435
HpyCH4IV ACGT 4 cut(s) 244, 537, 6236, 6415
HpySE526I ACGT 4 cut(s) 244, 537, 6236, 6415
HspAI GCGC 1 cut(s) 3308
Kpn2I TCCGGA 1 cut(s) 4049
Ksp22I TGATCA 3 cut(s) 532, 3517, 4458
LguI GCTCTTC 2 cut(s) 3915, 4528
MabI ACCWGGT 4 cut(s) 1563, 3628, 4317, 6079
MaeII ACGT 4 cut(s) 244, 537, 6236, 6415
MfeI CAATTG 5 cut(s) 2265, 2426, 4209, 4566, 4593
MflI RGATCY 8 cut(s) 1551, 1933, 2762, 2768, 3566, 3601, 5726, 6407
MlsI TGGCCA 3 cut(s) 2573, 3365, 4945
MluNI TGGCCA 3 cut(s) 2573, 3365, 4945
MlyI GAGTC 4 cut(s) 96, 1412, 1466, 1859
MmeI TCCRAC 9 cut(s) 1426, 2806, 3544, 4284, 4342, 5217, 5346, 5895, 6468
Mox20I TGGCCA 3 cut(s) 2573, 3365, 4945
Mph1103I ATGCAT 3 cut(s) 2410, 2518, 5026
MroI TCCGGA 1 cut(s) 4049
MroXI GAANNNNTTC 5 cut(s) 1479, 4057, 4539, 4824, 6000
MscI TGGCCA 3 cut(s) 2573, 3365, 4945
MslI CAYNNNNRTG 6 cut(s) 75, 1169, 1744, 3128, 4165, 5259
Msp20I TGGCCA 3 cut(s) 2573, 3365, 4945
MspA1I CMGCKG 4 cut(s) 2658, 4268, 4583, 5039
MspI CCGG 3 cut(s) 3138, 4050, 4435
MunI CAATTG 5 cut(s) 2265, 2426, 4209, 4566, 4593
Mva1269I GAATGC 7 cut(s) 804, 1039, 2410, 3011, 5122, 5856, 6456
MvnI CGCG 1 cut(s) 2027
NcoI CCATGG 2 cut(s) 1296, 2609
NdeI CATATG 1 cut(s) 5802
NheI GCTAGC 1 cut(s) 4400
NlaIV GGNNCC 9 cut(s) 343, 1729, 2770, 3100, 3568, 3634, 4439, 5094, 5875
NmuCI GTSAC 7 cut(s) 118, 634, 662, 1688, 1862, 2069, 6325
NsiI ATGCAT 3 cut(s) 2410, 2518, 5026
NspI RCATGY 6 cut(s) 203, 211, 1009, 1713, 3988, 5475
PaeI GCATGC 1 cut(s) 1009
PaeR7I CTCGAG 2 cut(s) 2154, 3146
PagI TCATGA 2 cut(s) 5173, 5556
PciSI GCTCTTC 2 cut(s) 3915, 4528
PcsI WCGNNNNNNNCGW 1 cut(s) 1646
PctI GAATGC 7 cut(s) 804, 1039, 2410, 3011, 5122, 5856, 6456
PdmI GAANNNNTTC 5 cut(s) 1479, 4057, 4539, 4824, 6000
PflMI CCANNNNNTGG 2 cut(s) 3361, 4941
PfoI TCCNGGA 1 cut(s) 1032
PleI GAGTC 4 cut(s) 96, 1411, 1465, 1859
PpsI GAGTC 4 cut(s) 96, 1411, 1465, 1859
Ppu21I YACGTR 2 cut(s) 6237, 6416
PshAI GACNNNNGTC 1 cut(s) 405
PshBI ATTAAT 5 cut(s) 1836, 2915, 4260, 5483, 5775
PsiI TTATAA 1 cut(s) 1376
Psp124BI GAGCTC 4 cut(s) 1156, 3718, 3910, 5721
PspFI CCCAGC 2 cut(s) 4277, 5648
PspN4I GGNNCC 9 cut(s) 343, 1729, 2770, 3100, 3568, 3634, 4439, 5094, 5875
PspPI GGNCC 7 cut(s) 775, 1882, 4437, 5239, 5760, 6173, 6441
PspXI VCTCGAGB 1 cut(s) 2154
PsrI GAACNNNNNNTAC 2 cut(s) 3082, 3114
PstI CTGCAG 3 cut(s) 490, 2287, 2332
PstNI CAGNNNCTG 6 cut(s) 1139, 2291, 3422, 4586, 4958, 5362
PsuI RGATCY 8 cut(s) 1551, 1933, 2762, 2768, 3566, 3601, 5726, 6407
PvuII CAGCTG 3 cut(s) 4268, 4583, 5039
RseI CAYNNNNRTG 6 cut(s) 75, 1169, 1744, 3128, 4165, 5259
SacI GAGCTC 4 cut(s) 1156, 3718, 3910, 5721
SapI GCTCTTC 2 cut(s) 3915, 4528
Sau96I GGNCC 7 cut(s) 775, 1882, 4437, 5239, 5760, 6173, 6441
ScaI AGTACT 4 cut(s) 417, 2373, 5081, 6208
SchI GAGTC 4 cut(s) 96, 1412, 1466, 1859
SexAI ACCWGGT 4 cut(s) 1563, 3628, 4317, 6079
SfcI CTRYAG 5 cut(s) 486, 2283, 2328, 2388, 4269
Sfr274I CTCGAG 2 cut(s) 2154, 3146
SinI GGWCC 5 cut(s) 4437, 5239, 5760, 6173, 6441
SlaI CTCGAG 2 cut(s) 2154, 3146
SmiMI CAYNNNNRTG 6 cut(s) 75, 1169, 1744, 3128, 4165, 5259
SmlI CTYRAG 9 cut(s) 692, 1289, 2013, 2154, 2888, 3146, 3167, 3607, 4487
SmoI CTYRAG 9 cut(s) 692, 1289, 2013, 2154, 2888, 3146, 3167, 3607, 4487
SpeI ACTAGT 1 cut(s) 4669
SphI GCATGC 1 cut(s) 1009
SspI AATATT 6 cut(s) 328, 552, 1063, 3795, 4119, 4678
SstI GAGCTC 4 cut(s) 1156, 3718, 3910, 5721
StyI CCWWGG 5 cut(s) 1296, 2609, 2773, 4137, 6189
TaiI ACGT 4 cut(s) 247, 540, 6239, 6418
TaqI TCGA 7 cut(s) 2155, 2636, 3147, 4350, 6181, 6339, 6429
TatI WGTACW 7 cut(s) 415, 1396, 1909, 2371, 4174, 5079, 6206
TauI GCSGC 3 cut(s) 371, 2027, 5741
TseFI GTSAC 7 cut(s) 118, 634, 662, 1688, 1862, 2069, 6325
Tsp45I GTSAC 7 cut(s) 118, 634, 662, 1688, 1862, 2069, 6325
TspGWI ACGGA 1 cut(s) 5971
Van91I CCANNNNNTGG 2 cut(s) 3361, 4941
VpaK11BI GGWCC 5 cut(s) 4437, 5239, 5760, 6173, 6441
VspI ATTAAT 5 cut(s) 1836, 2915, 4260, 5483, 5775
XagI CCTNNNNNAGG 1 cut(s) 6122
XapI RAATTY 7 cut(s) 182, 1479, 3412, 3943, 4054, 5548, 5672
XceI RCATGY 6 cut(s) 203, 211, 1009, 1713, 3988, 5475
XcmI CCANNNNNNNNNTGG 1 cut(s) 1743
XhoI CTCGAG 2 cut(s) 2154, 3146
XmiI GTMKAC 1 cut(s) 6363
XmnI GAANNNNTTC 5 cut(s) 1479, 4057, 4539, 4824, 6000
ZrmI AGTACT 4 cut(s) 417, 2373, 5081, 6208
Zsp2I ATGCAT 3 cut(s) 2410, 2518, 5026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.