Rroxscaffold_7G00176570

A reductase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
16154743 .. 16157919
3177 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_7G00176570.1

Sequence Viewer

Length: 216 bp
ATGGTTCTAAAGCATGAGGAGACTCGGGCGCATAAACTAAAACCTCGGGAATCCTTCATCTCATGTGCCTCCCATTACGACGACGAGGTGCTCATCAACCGCCGCTTATCGCCTCCCCCGCCCAAACCCAAATTCGTCCACACCGACCCCTCATTGTGCTTTAAGGAGGACGAGGACATCATCCAAGCCGTTCTAAATGGCGGTGTTCCTTCTTAG

Protein Analysis

71

Amino Acids

8.07

Weight (kDa)

6.39

Isoelectric Point (pI)

59.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 100, 103, 119, 201
AcsI RAATTY 1 cut(s) 131
AjuI GAANNNNNNNTTGG 2 cut(s) 116, 148
Alw21I GWGCWC 1 cut(s) 93
Alw26I GTCTC 1 cut(s) 14
Ama87I CYCGRG 2 cut(s) 24, 45
ApoI RAATTY 1 cut(s) 131
AspLEI GCGC 1 cut(s) 31
AvaI CYCGRG 2 cut(s) 24, 45
Bbv12I GWGCWC 1 cut(s) 93
BceAI ACGGC 1 cut(s) 173
BcoDI GTCTC 1 cut(s) 14
BisI GCNGC 1 cut(s) 103
BlsI GCNGC 1 cut(s) 104
BmeT110I CYCGRG 2 cut(s) 24, 45
BsaJI CCNNGG 1 cut(s) 44
BseDI CCNNGG 1 cut(s) 44
BseGI GGATG 1 cut(s) 180
BseRI GAGGAG 1 cut(s) 32
BsiHKAI GWGCWC 1 cut(s) 93
BsiHKCI CYCGRG 2 cut(s) 24, 45
BsmAI GTCTC 1 cut(s) 14
BsoBI CYCGRG 2 cut(s) 24, 45
Bsp1286I GDGCHC 1 cut(s) 93
BspACI CCGC 4 cut(s) 100, 103, 119, 201
BssECI CCNNGG 1 cut(s) 44
BstDEI CTNAG 1 cut(s) 213
BstF5I GGATG 1 cut(s) 180
BstHHI GCGC 1 cut(s) 31
BstMAI GTCTC 1 cut(s) 14
BstMWI GCNNNNNNNGC 1 cut(s) 118
BtsCI GGATG 1 cut(s) 180
CfoI GCGC 1 cut(s) 31
CviAII CATG 2 cut(s) 14, 63
CviJI RGCY 1 cut(s) 188
CviKI_1 RGCY 1 cut(s) 188
DdeI CTNAG 1 cut(s) 213
Eco88I CYCGRG 2 cut(s) 24, 45
FaeI CATG 2 cut(s) 17, 66
FaiI YATR 3 cut(s) 15, 33, 64
FatI CATG 2 cut(s) 13, 62
FauI CCCGC 1 cut(s) 126
Fnu4HI GCNGC 1 cut(s) 103
FokI GGATG 1 cut(s) 167
Fsp4HI GCNGC 1 cut(s) 103
GlaI GCGC 1 cut(s) 30
GluI GCNGC 1 cut(s) 103
HhaI GCGC 1 cut(s) 31
Hin1II CATG 2 cut(s) 17, 66
Hin6I GCGC 1 cut(s) 29
HinP1I GCGC 1 cut(s) 29
HinfI GANTC 2 cut(s) 22, 50
Hpy166II GTNNAC 1 cut(s) 139
Hpy188III TCNNGA 1 cut(s) 47
Hpy8I GTNNAC 1 cut(s) 139
Hpy99I CGWCG 2 cut(s) 83, 86
HpyAV CCTTC 1 cut(s) 64
HpyF10VI GCNNNNNNNGC 1 cut(s) 118
HpyF3I CTNAG 1 cut(s) 213
Hsp92II CATG 2 cut(s) 17, 66
HspAI GCGC 1 cut(s) 29
MhlI GDGCHC 1 cut(s) 93
MluCI AATT 1 cut(s) 131
MlyI GAGTC 1 cut(s) 16
MnlI CCTC 8 cut(s) 10, 54, 79, 79, 123, 160, 160, 166
MseI TTAA 1 cut(s) 162
MwoI GCNNNNNNNGC 1 cut(s) 118
NlaIII CATG 2 cut(s) 17, 66
PcsI WCGNNNNNNNCGW 1 cut(s) 141
PfeI GAWTC 1 cut(s) 50
PkrI GCNGC 1 cut(s) 104
PleI GAGTC 1 cut(s) 16
PpsI GAGTC 1 cut(s) 16
SaqAI TTAA 1 cut(s) 162
SatI GCNGC 1 cut(s) 103
SchI GAGTC 1 cut(s) 16
SduI GDGCHC 1 cut(s) 93
SetI ASST 2 cut(s) 46, 90
Sse9I AATT 1 cut(s) 131
SsiI CCGC 4 cut(s) 100, 103, 119, 201
TasI AATT 1 cut(s) 131
TauI GCSGC 1 cut(s) 105
TfiI GAWTC 1 cut(s) 50
Tru1I TTAA 1 cut(s) 162
Tru9I TTAA 1 cut(s) 162
TspDTI ATGAA 1 cut(s) 46
XapI RAATTY 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.