Rroxscaffold_7G00211720

Plant protein of unknown function (DUF936)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0013102
Physical Location & Seq
Forward (+)
62149426 .. 62152245
2820 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00211720.1

Sequence Viewer

Length: 1782 bp
ATGCCTAGCCTGAGTTCTGGGGTTCTTGAGAAGCTTGTTGAAGAAATGGGAAGTGACCCAAAGACCCTGAACGGTGATCGAAAACCGATGTTATTACAAATCCGGAGCATCATGCCAGTTTTAGCAGAAGGTGATCTTTGGCCCAATAAAGGATTTTACCTAAAGGATGACATGGTTCTTTGCAACACATTGCAACTAGGGCAATTGATATATGTCGAAAAGTTGGAGGTGGCGCGGCCAGTGCCTGTGCTTAGAGGTATAAACCCTGTCCCAGGCCAACTAATTCCCTGTGTTGGACAGCTTGAAGATCTCGTTTCCATTGATAAGTTTGTGGATTTTAAAGGGGCGTCTGATTTACTATTTGTAATGGAAAAGAATAGTAACGTGGGGAAGAAGCCACAATCAAAATTTCGATCTTTGAGGGCCTCTAAGGCCCGCCCAAGCGAGAAGATCTCAAGGATATGTAGGTCCGGAAGCGGTGATGTTGTTGACAAGGAAATATGTGAGGTGACAAATGGGTCGAGAAAAGTGAGCTCAAGATATGTTGTGAGTGATTCTGAAAGCACAACATCTTCTTCCTCGTTGACACAAACTGCGAGGAGAAGGAGCTGGATTGGACCAGAAGCTGCTGATTTTCCACTTGTAAAGCATGAGATAAGGCCAAGTGTTAGGCGCAGCCGTAGTGCGCATGTTTCTCCAGTTCGTTCTACAAGAAGTGGTTCAGATGACAATTCAAGTTGTAAAATAAAAAGAACAATTAGCTTTGATCAAGCTAGGAAATCAAGTAAAAACTCCAACAATAGGATCTCGGTGTACGCGAAAAATTGTGAGCAGCCCTTAGATCCTCCAGTGACGGTTAATTTGGCCATTGATAGTAACTGGTCAGAAAGTAATATACAGTGGAACTCCCTTCCTCCAACATTAGTGACTCTGGGAAAGGAGGTGTTAAGGCACAAAGATGTTTCTCTGCTTGCTGCAGTGCAGGCTCTGCAAGAGGCTTCTGTTGCTGAGAGATTGCTGAAATGCCTAAGTACATACTCAGAACTTCAATTAGCCGAAGGGGAGGAGCATCTTCCGTCAATTATTAAATTCTTCGATCTTCAAGACTACTTGGTTCATACTCGATTAATTGTTCAGTCATTGACCAACATCAGTCCAATTAGAGATGATGACACAAATCTAGGCAGCCCTGGTTCCATCAAGGAAGCATTGATACTTGCAGTAGACCGGAAGAAAAATGCAACATCATGGATTAAAGCAGCAATGTCATATGATCTCTCCCCATCTTTTTCTCTTGATAGTGTTCCAATGAAGGCTACAAATCCATCAAATAAATCAAGTAAAACTTGTGGTAATGTACCAAAGGGTACACTTATAGTTAAGAAGCAAAAGAATGATGCTCATATTAGATTGGTCTCGGAGAGAGAAAACTTGCACGATTGGGTGAAGGGAAGTGCTTTATCCGCAGCTGCAGACTTGGAAAAATCCTTACATGATGAATGCAGAAAATGGTTTTTGGCTACCTTTGAGAGTTACCTGGATGAGGTTAAGAGCATAACCGATTCGATGGAATCGGATAGCCAAGTAGCCGAGACTATGTGTCAGATTAAGAAAGTTGGAGACCGGTTGGATGTGATTGTCAGCAAAGAAGATTCTGAATTGGAAGCTTATGGGAGGATCAAGGAGAAGATATATGGGGTACTTCTGAAGAATGTGGAGAGGACTACTATGGTTATGGAACAAATGAATGCAATATTCAATGTAGACAATGGGCAACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF936

Protein Analysis

593

Amino Acids

65.84

Weight (kDa)

8.49

Isoelectric Point (pI)

47.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF936 PF06075 4 - 55 2.5e-12 Plant protein of unknown function (DUF936)
DUF936 PF06075 56 - 105 7.6e-14 Plant protein of unknown function (DUF936)
DUF6857 PF21647 291 - 578 1e-73 Domain of unknown function (DUF6857)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19610
fragaria_vesca FvH4_2g04240
malus_domestica MD05G1099200.v1.1
prunus_persica Prupe.8G143800_v2.0.a1 Prupe.8G143800_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0253661
rosa_laevigata RLG00000014995
rosa_multiflora Rmu_co8217522.1_g000001 Rmu_sc0001351.1_g000001
rosa_roxburghii Rroxscaffold_7G00211720
rosa_rugosa Rorug05G0545400
rosa_samantha Rh6AG061100 Rh6BG054900 Rh6CG054500 Rh6CG054600 Rh6DG052000 Rh6DG052100
rosa_wichuraiana Rw6G005430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 517
Acc16I TGCGCA 1 cut(s) 687
AccI GTMKAC 2 cut(s) 1224, 1764
AccII CGCG 2 cut(s) 235, 818
AccIII TCCGGA 2 cut(s) 102, 470
AciI CCGC 4 cut(s) 235, 436, 477, 1464
AclWI GGATC 3 cut(s) 812, 836, 1685
AcoI YGGCCR 2 cut(s) 236, 864
AcsI RAATTY 2 cut(s) 407, 1088
AcuI CTGAAG 1 cut(s) 1727
AcyI GRCGYC 1 cut(s) 347
AfaI GTAC 5 cut(s) 815, 1033, 1359, 1369, 1701
AfiI CCNNNNNNNGG 5 cut(s) 149, 272, 293, 801, 1543
AgeI ACCGGT 1 cut(s) 1623
AgsI TTSAA 6 cut(s) 41, 305, 735, 1049, 1103, 1759
AhdI GACNNNNNGTC 1 cut(s) 1599
AjnI CCWGG 3 cut(s) 271, 1189, 1536
AluBI AGCT 9 cut(s) 34, 301, 534, 609, 626, 762, 773, 1469, 1667
AluI AGCT 9 cut(s) 34, 301, 534, 609, 626, 762, 773, 1469, 1667
Alw21I GWGCWC 1 cut(s) 536
Alw26I GTCTC 3 cut(s) 1420, 1586, 1614
AlwI GGATC 3 cut(s) 812, 836, 1685
AlwNI CAGNNNCTG 3 cut(s) 245, 626, 988
Aor13HI TCCGGA 2 cut(s) 102, 470
AoxI GGCC 7 cut(s) 140, 236, 274, 423, 432, 659, 864
ApeKI GCWGC 8 cut(s) 626, 675, 832, 974, 1185, 1259, 1466, 1469
ApoI RAATTY 2 cut(s) 407, 1088
ArsI GACNNNNNNTTYG 2 cut(s) 844, 876
AseI ATTAAT 1 cut(s) 1127
AsiGI ACCGGT 1 cut(s) 1623
Asp700I GAANNNNTTC 1 cut(s) 718
AspLEI GCGC 3 cut(s) 235, 675, 688
AspS9I GGNCC 5 cut(s) 141, 423, 433, 468, 617
AsuHPI GGTGA 5 cut(s) 86, 143, 491, 520, 1456
AvaII GGWCC 2 cut(s) 468, 617
BalI TGGCCA 1 cut(s) 866
BanII GRGCYC 1 cut(s) 536
BarI GAAGNNNNNNTAC 2 cut(s) 1197, 1229
Bbv12I GWGCWC 1 cut(s) 536
BbvI GCAGC 8 cut(s) 613, 687, 844, 961, 1197, 1271, 1456, 1478
BccI CCATC 4 cut(s) 1205, 1291, 1333, 1561
BceAI ACGGC 1 cut(s) 663
BciT130I CCWGG 3 cut(s) 273, 1191, 1538
BclI TGATCA 1 cut(s) 766
BcoDI GTCTC 3 cut(s) 1420, 1586, 1614
BfaI CTAG 4 cut(s) 6, 197, 774, 1181
BfmI CTRYAG 2 cut(s) 975, 1470
BglI GCCNNNNNGGC 1 cut(s) 431
BglII AGATCT 2 cut(s) 307, 450
BisI GCNGC 9 cut(s) 236, 627, 676, 833, 975, 1186, 1260, 1467, 1470
BlsI GCNGC 9 cut(s) 237, 628, 677, 834, 976, 1187, 1261, 1468, 1471
Bme1390I CCNGG 3 cut(s) 273, 1191, 1538
Bme18I GGWCC 2 cut(s) 468, 617
BmeRI GACNNNNNGTC 1 cut(s) 1599
BmgT120I GGNCC 5 cut(s) 141, 423, 433, 468, 617
BmiI GGNNCC 1 cut(s) 1195
BmrFI CCNGG 3 cut(s) 273, 1191, 1538
BmsI GCATC 3 cut(s) 117, 1078, 1387
BplI GAGNNNNNCTC 2 cut(s) 437, 469
BpmI CTGGAG 2 cut(s) 681, 831
BpuEI CTTGAG 3 cut(s) 47, 439, 520
BsaHI GRCGYC 1 cut(s) 347
BsaI GGTCTC 2 cut(s) 1420, 1614
BsaJI CCNNGG 2 cut(s) 271, 1189
BsaWI WCCGGW 4 cut(s) 102, 470, 1227, 1623
Bsc4I CCNNNNNNNGG 5 cut(s) 149, 272, 293, 801, 1543
Bse118I RCCGGY 1 cut(s) 1623
Bse1I ACTGG 5 cut(s) 116, 239, 698, 848, 884
Bse3DI GCAATG 2 cut(s) 188, 1269
BseAI TCCGGA 2 cut(s) 102, 470
BseBI CCWGG 3 cut(s) 273, 1191, 1538
BseDI CCNNGG 2 cut(s) 271, 1189
BseGI GGATG 3 cut(s) 172, 1546, 1636
BseLI CCNNNNNNNGG 5 cut(s) 149, 272, 293, 801, 1543
BseMI GCAATG 2 cut(s) 188, 1269
BseMII CTCAG 2 cut(s) 999, 1053
BseNI ACTGG 5 cut(s) 116, 239, 698, 848, 884
BseRI GAGGAG 2 cut(s) 613, 1079
BseXI GCAGC 8 cut(s) 613, 687, 844, 961, 1197, 1271, 1456, 1478
BsgI GTGCAG 1 cut(s) 1001
Bsh1236I CGCG 2 cut(s) 235, 818
BshFI GGCC 7 cut(s) 142, 238, 276, 425, 434, 661, 866
BshTI ACCGGT 1 cut(s) 1623
BsiHKAI GWGCWC 1 cut(s) 536
BsiSI CCGG 4 cut(s) 103, 471, 1228, 1624
BslFI GGGAC 1 cut(s) 254
BslI CCNNNNNNNGG 5 cut(s) 149, 272, 293, 801, 1543
BsmAI GTCTC 3 cut(s) 1420, 1586, 1614
BsmFI GGGAC 1 cut(s) 254
BsmI GAATGC 2 cut(s) 1505, 1753
BsnI GGCC 7 cut(s) 142, 238, 276, 425, 434, 661, 866
Bso31I GGTCTC 2 cut(s) 1420, 1614
Bsp1286I GDGCHC 1 cut(s) 536
Bsp13I TCCGGA 2 cut(s) 102, 470
BspACI CCGC 4 cut(s) 235, 436, 477, 1464
BspANI GGCC 7 cut(s) 142, 238, 276, 425, 434, 661, 866
BspCNI CTCAG 2 cut(s) 1000, 1052
BspEI TCCGGA 2 cut(s) 102, 470
BspFNI CGCG 2 cut(s) 235, 818
BspLI GGNNCC 1 cut(s) 1195
BspMAI CTGCAG 2 cut(s) 979, 1474
BspPI GGATC 3 cut(s) 812, 836, 1685
BspTNI GGTCTC 2 cut(s) 1420, 1614
BsrDI GCAATG 2 cut(s) 188, 1269
BsrFI RCCGGY 1 cut(s) 1623
BsrI ACTGG 5 cut(s) 116, 239, 698, 848, 884
BssAI RCCGGY 1 cut(s) 1623
BssECI CCNNGG 2 cut(s) 271, 1189
BssNI GRCGYC 1 cut(s) 347
Bst2UI CCWGG 3 cut(s) 273, 1191, 1538
Bst4CI ACNGT 3 cut(s) 74, 856, 900
BstACI GRCGYC 1 cut(s) 347
BstAPI GCANNNNNTGC 1 cut(s) 988
BstC8I GCNNGC 3 cut(s) 436, 972, 984
BstDEI CTNAG 7 cut(s) 11, 251, 429, 838, 1008, 1028, 1039
BstENI CCTNNNNNAGG 2 cut(s) 270, 1541
BstF5I GGATG 3 cut(s) 172, 1546, 1636
BstFNI CGCG 2 cut(s) 235, 818
BstHHI GCGC 3 cut(s) 235, 675, 688
BstMAI GTCTC 3 cut(s) 1420, 1586, 1614
BstMWI GCNNNNNNNGC 7 cut(s) 199, 241, 431, 983, 988, 1004, 1463
BstNI CCWGG 3 cut(s) 273, 1191, 1538
BstNSI RCATGY 1 cut(s) 692
BstSCI CCNGG 3 cut(s) 271, 1189, 1536
BstSFI CTRYAG 2 cut(s) 975, 1470
BstUI CGCG 2 cut(s) 235, 818
BstV1I GCAGC 8 cut(s) 613, 687, 844, 961, 1197, 1271, 1456, 1478
BstX2I RGATCY 4 cut(s) 307, 450, 804, 841
BstYI RGATCY 4 cut(s) 307, 450, 804, 841
BsuRI GGCC 7 cut(s) 142, 238, 276, 425, 434, 661, 866
BtsCI GGATG 3 cut(s) 172, 1546, 1636
BtsI GCAGTG 1 cut(s) 984
BtsIMutI CAGTG 4 cut(s) 246, 855, 905, 984
Cac8I GCNNGC 3 cut(s) 436, 972, 984
CaiI CAGNNNCTG 3 cut(s) 245, 626, 988
CfoI GCGC 3 cut(s) 235, 675, 688
Cfr10I RCCGGY 1 cut(s) 1623
Cfr13I GGNCC 5 cut(s) 141, 423, 433, 468, 617
CseI GACGC 1 cut(s) 336
Csp6I GTAC 5 cut(s) 814, 1032, 1358, 1368, 1700
CspAI ACCGGT 1 cut(s) 1623
CviAII CATG 6 cut(s) 112, 172, 650, 689, 1248, 1493
CviQI GTAC 5 cut(s) 814, 1032, 1358, 1368, 1700
DdeI CTNAG 7 cut(s) 11, 251, 429, 838, 1008, 1028, 1039
DraI TTTAAA 1 cut(s) 340
DrdI GACNNNNNNGTC 1 cut(s) 517
DriI GACNNNNNGTC 1 cut(s) 1599
DseDI GACNNNNNNGTC 1 cut(s) 517
EaeI YGGCCR 2 cut(s) 236, 864
Eam1105I GACNNNNNGTC 1 cut(s) 1599
Ecl136II GAGCTC 1 cut(s) 534
Eco24I GRGCYC 1 cut(s) 536
Eco31I GGTCTC 2 cut(s) 1420, 1614
Eco47I GGWCC 2 cut(s) 468, 617
Eco53kI GAGCTC 1 cut(s) 534
Eco57I CTGAAG 1 cut(s) 1727
EcoICRI GAGCTC 1 cut(s) 534
EcoNI CCTNNNNNAGG 2 cut(s) 270, 1541
EcoO109I RGGNCCY 1 cut(s) 423
EcoRII CCWGG 3 cut(s) 271, 1189, 1536
EcoT38I GRGCYC 1 cut(s) 536
FaeI CATG 6 cut(s) 115, 175, 653, 692, 1251, 1496
FalI AAGNNNNNCTT 4 cut(s) 120, 152, 1330, 1362
FaqI GGGAC 1 cut(s) 254
FatI CATG 6 cut(s) 111, 171, 649, 688, 1247, 1492
FauI CCCGC 1 cut(s) 443
FauNDI CATATG 1 cut(s) 1270
FbaI TGATCA 1 cut(s) 766
FblI GTMKAC 2 cut(s) 1224, 1764
Fnu4HI GCNGC 9 cut(s) 236, 627, 676, 833, 975, 1186, 1260, 1467, 1470
FokI GGATG 3 cut(s) 179, 1553, 1643
FriOI GRGCYC 1 cut(s) 536
Fsp4HI GCNGC 9 cut(s) 236, 627, 676, 833, 975, 1186, 1260, 1467, 1470
FspAI RTGCGCAY 1 cut(s) 687
FspBI CTAG 4 cut(s) 6, 197, 774, 1181
FspI TGCGCA 1 cut(s) 687
GlaI GCGC 3 cut(s) 234, 674, 687
GluI GCNGC 9 cut(s) 236, 627, 676, 833, 975, 1186, 1260, 1467, 1470
GsuI CTGGAG 2 cut(s) 681, 831
HaeIII GGCC 7 cut(s) 142, 238, 276, 425, 434, 661, 866
HapII CCGG 4 cut(s) 103, 471, 1228, 1624
HgaI GACGC 1 cut(s) 336
HhaI GCGC 3 cut(s) 235, 675, 688
Hin1I GRCGYC 1 cut(s) 347
Hin1II CATG 6 cut(s) 115, 175, 653, 692, 1251, 1496
Hin6I GCGC 3 cut(s) 233, 673, 686
HinP1I GCGC 3 cut(s) 233, 673, 686
HincII GTYRAC 2 cut(s) 490, 585
HindII GTYRAC 2 cut(s) 490, 585
HindIII AAGCTT 2 cut(s) 32, 1665
HinfI GANTC 5 cut(s) 554, 928, 1562, 1571, 1652
HpaII CCGG 4 cut(s) 103, 471, 1228, 1624
HphI GGTGA 5 cut(s) 86, 143, 491, 520, 1456
Hpy166II GTNNAC 6 cut(s) 490, 585, 814, 1225, 1370, 1765
Hpy188III TCNNGA 7 cut(s) 26, 103, 471, 522, 537, 1103, 1295
Hpy8I GTNNAC 6 cut(s) 490, 585, 814, 1225, 1370, 1765
HpyAV CCTTC 6 cut(s) 122, 597, 920, 1052, 1306, 1441
HpyCH4III ACNGT 3 cut(s) 74, 856, 900
HpyCH4IV ACGT 1 cut(s) 384
HpyF10VI GCNNNNNNNGC 7 cut(s) 199, 241, 431, 983, 988, 1004, 1463
HpyF3I CTNAG 7 cut(s) 11, 251, 429, 838, 1008, 1028, 1039
HpySE526I ACGT 1 cut(s) 384
Hsp92I GRCGYC 1 cut(s) 347
Hsp92II CATG 6 cut(s) 115, 175, 653, 692, 1251, 1496
HspAI GCGC 3 cut(s) 233, 673, 686
Kpn2I TCCGGA 2 cut(s) 102, 470
Ksp22I TGATCA 1 cut(s) 766
LmnI GCTCC 3 cut(s) 105, 606, 1066
Lsp1109I GCAGC 8 cut(s) 613, 687, 844, 961, 1197, 1271, 1456, 1478
LweI GCATC 3 cut(s) 117, 1078, 1387
MaeI CTAG 4 cut(s) 6, 197, 774, 1181
MaeII ACGT 1 cut(s) 384
MaeIII GTNAC 7 cut(s) 53, 380, 508, 850, 875, 925, 1532
MfeI CAATTG 1 cut(s) 203
MflI RGATCY 4 cut(s) 307, 450, 804, 841
MhlI GDGCHC 1 cut(s) 536
MlsI TGGCCA 1 cut(s) 866
MluNI TGGCCA 1 cut(s) 866
MlyI GAGTC 1 cut(s) 922
MmeI TCCRAC 6 cut(s) 204, 274, 819, 941, 1597, 1608
Mox20I TGGCCA 1 cut(s) 866
MroI TCCGGA 2 cut(s) 102, 470
MroXI GAANNNNTTC 1 cut(s) 718
MscI TGGCCA 1 cut(s) 866
MseI TTAA 9 cut(s) 339, 858, 947, 1086, 1127, 1254, 1380, 1548, 1608
MslI CAYNNNNRTG 1 cut(s) 957
Msp20I TGGCCA 1 cut(s) 866
MspA1I CMGCKG 1 cut(s) 1469
MspI CCGG 4 cut(s) 103, 471, 1228, 1624
MspR9I CCNGG 3 cut(s) 273, 1191, 1538
MunI CAATTG 1 cut(s) 203
Mva1269I GAATGC 2 cut(s) 1505, 1753
MvaI CCWGG 3 cut(s) 273, 1191, 1538
MvnI CGCG 2 cut(s) 235, 818
MwoI GCNNNNNNNGC 7 cut(s) 199, 241, 431, 983, 988, 1004, 1463
NdeI CATATG 1 cut(s) 1270
NlaIII CATG 6 cut(s) 115, 175, 653, 692, 1251, 1496
NlaIV GGNNCC 1 cut(s) 1195
NmeAIII GCCGAG 1 cut(s) 1615
NmuCI GTSAC 4 cut(s) 53, 508, 850, 925
NsbI TGCGCA 1 cut(s) 687
NspI RCATGY 1 cut(s) 692
PcsI WCGNNNNNNNCGW 1 cut(s) 815
PctI GAATGC 2 cut(s) 1505, 1753
PdmI GAANNNNTTC 1 cut(s) 718
PfeI GAWTC 4 cut(s) 554, 1562, 1571, 1652
PinAI ACCGGT 1 cut(s) 1623
PkrI GCNGC 9 cut(s) 237, 628, 677, 834, 976, 1187, 1261, 1468, 1471
PleI GAGTC 1 cut(s) 922
PpsI GAGTC 1 cut(s) 922
PshBI ATTAAT 1 cut(s) 1127
Psp124BI GAGCTC 1 cut(s) 536
Psp6I CCWGG 3 cut(s) 271, 1189, 1536
PspGI CCWGG 3 cut(s) 271, 1189, 1536
PspN4I GGNNCC 1 cut(s) 1195
PspPI GGNCC 5 cut(s) 141, 423, 433, 468, 617
PstI CTGCAG 2 cut(s) 979, 1474
PstNI CAGNNNCTG 3 cut(s) 245, 626, 988
PsuI RGATCY 4 cut(s) 307, 450, 804, 841
PvuII CAGCTG 1 cut(s) 1469
RsaI GTAC 5 cut(s) 815, 1033, 1359, 1369, 1701
RsaNI GTAC 5 cut(s) 814, 1032, 1358, 1368, 1700
RseI CAYNNNNRTG 1 cut(s) 957
SacI GAGCTC 1 cut(s) 536
SaqAI TTAA 9 cut(s) 339, 858, 947, 1086, 1127, 1254, 1380, 1548, 1608
SatI GCNGC 9 cut(s) 236, 627, 676, 833, 975, 1186, 1260, 1467, 1470
Sau96I GGNCC 5 cut(s) 141, 423, 433, 468, 617
SchI GAGTC 1 cut(s) 922
ScrFI CCNGG 3 cut(s) 273, 1191, 1538
SduI GDGCHC 1 cut(s) 536
SfaNI GCATC 3 cut(s) 117, 1078, 1387
SfcI CTRYAG 2 cut(s) 975, 1470
SfiI GGCCNNNNNGGCC 1 cut(s) 431
SinI GGWCC 2 cut(s) 468, 617
SmiMI CAYNNNNRTG 1 cut(s) 957
SmlI CTYRAG 3 cut(s) 26, 454, 535
SmoI CTYRAG 3 cut(s) 26, 454, 535
SsiI CCGC 4 cut(s) 235, 436, 477, 1464
SspI AATATT 1 cut(s) 1755
SspMI CTAG 4 cut(s) 6, 197, 774, 1181
SstI GAGCTC 1 cut(s) 536
StyD4I CCNGG 3 cut(s) 271, 1189, 1536
TaaI ACNGT 3 cut(s) 74, 856, 900
TaiI ACGT 1 cut(s) 387
TaqI TCGA 7 cut(s) 79, 216, 412, 521, 1095, 1123, 1565
TatI WGTACW 1 cut(s) 1031
TauI GCSGC 1 cut(s) 238
TfiI GAWTC 4 cut(s) 554, 1562, 1571, 1652
Tru1I TTAA 9 cut(s) 339, 858, 947, 1086, 1127, 1254, 1380, 1548, 1608
Tru9I TTAA 9 cut(s) 339, 858, 947, 1086, 1127, 1254, 1380, 1548, 1608
TscAI CASTG 4 cut(s) 246, 855, 905, 984
TseFI GTSAC 4 cut(s) 53, 508, 850, 925
TseI GCWGC 8 cut(s) 626, 675, 832, 974, 1185, 1259, 1466, 1469
Tsp45I GTSAC 4 cut(s) 53, 508, 850, 925
TspDTI ATGAA 4 cut(s) 1106, 1325, 1512, 1760
TspGWI ACGGA 1 cut(s) 1065
TspRI CASTG 4 cut(s) 246, 855, 905, 984
VpaK11BI GGWCC 2 cut(s) 468, 617
VspI ATTAAT 1 cut(s) 1127
XagI CCTNNNNNAGG 2 cut(s) 270, 1541
XapI RAATTY 2 cut(s) 407, 1088
XceI RCATGY 1 cut(s) 692
XmiI GTMKAC 2 cut(s) 1224, 1764
XmnI GAANNNNTTC 1 cut(s) 718
XspI CTAG 4 cut(s) 6, 197, 774, 1181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.