Rh6BG054900

Plant protein of unknown function (DUF936)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0013102
Physical Location & Seq
Reverse (-)
8894247 .. 8897414
3168 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG054900.1

Sequence Viewer

Length: 1851 bp
ATGCCCTCCACCTTTGGCGAAATGCCTAGCCTGAGTTCTGGGGTTCTTGAGAAGCTTGTTGAAGAAATGGGAAGTGACCCAAAGGCCCTGAACGGTGATCGAAAACCGGTGTTATTACAAATCAGGAGCATCATGCCTGTTTTAGCAGAAGGTGATCTTTGGCCCAATAAAGGGTTTTACTTGAAGGTTTCAGATGCTACACACACAATGTATGTGTCATTGCCTCCAGAGCAGGATGACATGGTTCTTTGCAACACATTGCAACTAGGGCAATTGATATATGTCGAAAAGTTGGAGGTGGCGCGGCCGGTGCCTGTGCTTAGAGGTATAAACCCTGTCCCGGGCCAACTAATTCCCTGTGTTGGACAGCTTGAAGATCTCGTTTCCATTGATAAGTTTGTGGATTTTAAAGGGGCGTCTGATTTACTATTTGTAATGGAAAAGAATAGTAAAGTGGGGAAGAAGGCACAGTCAAAATTTCGATCTTTGAGGGCCTCTAAGGCCCGCCCAAGCGAGAAGATCTCAAGGATATGTAGGTCCGGAAGCGGTGATGTTGTTGACAAGGAAATATGTGAGGTGACAAAGGGGTCGAGAAAAGTGAGCTCAAGATATGTTGAGAGTGATTCTGAAAACACAACATCTTCTTCCTCGTTGACACAAACTGCGAGGAGAAGGAGCTGGATTGGACCAGAAGCTGCAGATTTCCCGCTTGTAAAGCATGAGATAAAGCCAAGTGCTAGGCGCAGCCGTAGTGCGCATGTTTCTCCAGTTCGTTCTACAAGAAGTGGTTCAGATGACAATTCAAGTTGTAAAATAAAAAGAACAATTAGCTTTGATCAAGCTAGGAAATCAAGTAAAAACTCCAACAATAGGATCTCAGTGTACGGGAAAAATTGTGAGCAGCCCTTAGATCCTCCAGTGACGGTTAATTTGGCCATTGATAGTAACTGGTCAGAAAGTAATGTACAGTGGAACTCCCTTCCTCCAACATTAGTGACTCTGGGAAAGGAGGTGTTAAGGAACAAAGATGTTTCTCTGCTTGCTGCAGTGGAGGCTTTGCAAGAGGCTTCTGTTGCTGAGAGATTGCTGAAATGCCTAAGTACATACTCAGAACTTCAATTAGCCGAAGGGGAGGAGCATCTTCCGTCAATTATTAAATTCTTCGATCTTCAAGACTACTTGGTTCATACTCGATTAATTGTTCAGTCATTGACCAACATCAGTCCAATTAGAGATGATGACACAAATCTAGGCAGCCCTGGTTCCATCAAGGAAGCATTGATACTTGCAGTAGACCGGAAGAAAAATGCAACATCATGGATTAAAGCAGCAATGTCATATGATCTTTCCCCATCTTTTTCTCTTGATAGTGTTCCAATGAAGGCTACAAATCCATCAAATAAATCAAGTAAAACTTGTGGTAATGTACCAAAGGGTACACTTATAGTTAAGAAGCAAAAGAATGATGCTCATATTGGATTGGTCTCGGAGAGAGAAAACTTGCACGATTGGGTGAAGGGAAGTGCTTTATCCGCAACTGCAGACTTGGAAAAATCCTTACATGATGAATGCAGAAAATGGTTTTTGGCTACCTTTGAGAGTTACCTGGATGAGGTTAAGAGCAGAACCGATTCGATGGAATCGGATAGCCAAGTAGCCGAGACTATGTGTCAGATTAAGAAAGTTGGAGACCGGTTGGATGTGATTGTCAGCAAAGAAGATTCTGAATTGGAAGCTTATGGGAGGATCAAGGAGAAGATATATGGGGTACTTCTGAAGAATGTGGAGAGGACTACTATGGTTATGGAACAAATGAATGCAATATTCAATGTAGACAATGGGCAACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF936

Protein Analysis

616

Amino Acids

68.22

Weight (kDa)

7.9

Isoelectric Point (pI)

47.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF936 PF06075 11 - 128 4.5e-43 Plant protein of unknown function (DUF936)
DUF6857 PF21647 314 - 601 6.8e-74 Domain of unknown function (DUF6857)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013102)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G19610
fragaria_vesca FvH4_2g04240
malus_domestica MD05G1099200.v1.1
prunus_persica Prupe.8G143800_v2.0.a1 Prupe.8G143800_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0253661
rosa_laevigata RLG00000014995
rosa_multiflora Rmu_co8217522.1_g000001 Rmu_sc0001351.1_g000001
rosa_roxburghii Rroxscaffold_7G00211720
rosa_rugosa Rorug05G0545400
rosa_samantha Rh6AG061100 Rh6BG054900 Rh6CG054500 Rh6CG054600 Rh6DG052000 Rh6DG052100
rosa_wichuraiana Rw6G005430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 586
Acc16I TGCGCA 1 cut(s) 756
AccB1I GGYRCC 1 cut(s) 310
AccI GTMKAC 2 cut(s) 1293, 1833
AccII CGCG 1 cut(s) 304
AccIII TCCGGA 1 cut(s) 539
AciI CCGC 5 cut(s) 304, 505, 546, 707, 1533
AclWI GGATC 3 cut(s) 881, 905, 1754
AcoI YGGCCR 2 cut(s) 305, 933
AcsI RAATTY 2 cut(s) 476, 1157
AcuI CTGAAG 1 cut(s) 1796
AcyI GRCGYC 1 cut(s) 416
AfaI GTAC 6 cut(s) 884, 966, 1102, 1428, 1438, 1770
AfiI CCNNNNNNNGG 7 cut(s) 170, 171, 340, 341, 362, 870, 1612
AgeI ACCGGT 2 cut(s) 106, 1692
AgsI TTSAA 7 cut(s) 62, 184, 374, 804, 1118, 1172, 1828
AhdI GACNNNNNGTC 1 cut(s) 1668
AjnI CCWGG 2 cut(s) 1258, 1605
AluBI AGCT 8 cut(s) 55, 370, 603, 678, 695, 831, 842, 1736
AluI AGCT 8 cut(s) 55, 370, 603, 678, 695, 831, 842, 1736
Alw21I GWGCWC 1 cut(s) 605
Alw26I GTCTC 3 cut(s) 1489, 1655, 1683
AlwI GGATC 3 cut(s) 881, 905, 1754
AlwNI CAGNNNCTG 1 cut(s) 695
Ama87I CYCGRG 1 cut(s) 340
Aor13HI TCCGGA 1 cut(s) 539
AoxI GGCC 7 cut(s) 84, 161, 305, 343, 492, 501, 933
ApeKI GCWGC 6 cut(s) 695, 744, 901, 1043, 1254, 1328
ApoI RAATTY 2 cut(s) 476, 1157
ArsI GACNNNNNNTTYG 2 cut(s) 913, 945
AseI ATTAAT 1 cut(s) 1196
AsiGI ACCGGT 2 cut(s) 106, 1692
Asp700I GAANNNNTTC 2 cut(s) 787, 1630
AspLEI GCGC 3 cut(s) 304, 744, 757
AspS9I GGNCC 7 cut(s) 85, 162, 343, 492, 502, 537, 686
AsuC2I CCSGG 2 cut(s) 341, 342
AsuHPI GGTGA 5 cut(s) 107, 164, 560, 589, 1525
AvaI CYCGRG 1 cut(s) 340
AvaII GGWCC 2 cut(s) 537, 686
BalI TGGCCA 1 cut(s) 935
BanI GGYRCC 1 cut(s) 310
BanII GRGCYC 1 cut(s) 605
BarI GAAGNNNNNNTAC 2 cut(s) 1266, 1298
Bbv12I GWGCWC 1 cut(s) 605
BbvI GCAGC 6 cut(s) 682, 756, 913, 1030, 1266, 1340
BccI CCATC 4 cut(s) 1274, 1360, 1402, 1630
BceAI ACGGC 1 cut(s) 732
BciT130I CCWGG 2 cut(s) 1260, 1607
BclI TGATCA 1 cut(s) 835
BcnI CCSGG 2 cut(s) 341, 342
BcoDI GTCTC 3 cut(s) 1489, 1655, 1683
BfaI CTAG 5 cut(s) 27, 266, 738, 843, 1250
BfmI CTRYAG 3 cut(s) 696, 1044, 1539
BglI GCCNNNNNGGC 1 cut(s) 500
BglII AGATCT 2 cut(s) 376, 519
BisI GCNGC 7 cut(s) 305, 696, 745, 902, 1044, 1255, 1329
BlsI GCNGC 7 cut(s) 306, 697, 746, 903, 1045, 1256, 1330
Bme1390I CCNGG 4 cut(s) 341, 342, 1260, 1607
Bme18I GGWCC 2 cut(s) 537, 686
BmeRI GACNNNNNGTC 1 cut(s) 1668
BmeT110I CYCGRG 1 cut(s) 340
BmgT120I GGNCC 7 cut(s) 85, 162, 343, 492, 502, 537, 686
BmiI GGNNCC 2 cut(s) 312, 1264
BmrFI CCNGG 4 cut(s) 341, 342, 1260, 1607
BmsI GCATC 4 cut(s) 138, 184, 1147, 1456
BplI GAGNNNNNCTC 2 cut(s) 506, 538
BpmI CTGGAG 3 cut(s) 210, 750, 900
BpuEI CTTGAG 3 cut(s) 68, 508, 589
BpuMI CCSGG 2 cut(s) 341, 342
BsaHI GRCGYC 1 cut(s) 416
BsaI GGTCTC 2 cut(s) 1489, 1683
BsaJI CCNNGG 2 cut(s) 340, 1258
BsaWI WCCGGW 4 cut(s) 106, 539, 1296, 1692
Bsc4I CCNNNNNNNGG 7 cut(s) 170, 171, 340, 341, 362, 870, 1612
Bse118I RCCGGY 3 cut(s) 106, 307, 1692
Bse1I ACTGG 3 cut(s) 767, 917, 953
Bse3DI GCAATG 3 cut(s) 218, 257, 1338
BseAI TCCGGA 1 cut(s) 539
BseBI CCWGG 2 cut(s) 1260, 1607
BseDI CCNNGG 2 cut(s) 340, 1258
BseGI GGATG 3 cut(s) 241, 1615, 1705
BseLI CCNNNNNNNGG 7 cut(s) 170, 171, 340, 341, 362, 870, 1612
BseMI GCAATG 3 cut(s) 218, 257, 1338
BseMII CTCAG 4 cut(s) 23, 891, 1068, 1122
BseNI ACTGG 3 cut(s) 767, 917, 953
BseRI GAGGAG 2 cut(s) 682, 1148
BseX3I CGGCCG 1 cut(s) 305
BseXI GCAGC 6 cut(s) 682, 756, 913, 1030, 1266, 1340
Bsh1236I CGCG 1 cut(s) 304
Bsh1285I CGRYCG 1 cut(s) 308
BshFI GGCC 7 cut(s) 86, 163, 307, 345, 494, 503, 935
BshNI GGYRCC 1 cut(s) 310
BshTI ACCGGT 2 cut(s) 106, 1692
BsiEI CGRYCG 1 cut(s) 308
BsiHKAI GWGCWC 1 cut(s) 605
BsiHKCI CYCGRG 1 cut(s) 340
BsiSI CCGG 6 cut(s) 107, 308, 341, 540, 1297, 1693
BslFI GGGAC 1 cut(s) 323
BslI CCNNNNNNNGG 7 cut(s) 170, 171, 340, 341, 362, 870, 1612
BsmAI GTCTC 3 cut(s) 1489, 1655, 1683
BsmFI GGGAC 1 cut(s) 323
BsmI GAATGC 2 cut(s) 1574, 1822
BsnI GGCC 7 cut(s) 86, 163, 307, 345, 494, 503, 935
Bso31I GGTCTC 2 cut(s) 1489, 1683
BsoBI CYCGRG 1 cut(s) 340
Bsp1286I GDGCHC 1 cut(s) 605
Bsp13I TCCGGA 1 cut(s) 539
Bsp1407I TGTACA 1 cut(s) 964
BspACI CCGC 5 cut(s) 304, 505, 546, 707, 1533
BspANI GGCC 7 cut(s) 86, 163, 307, 345, 494, 503, 935
BspCNI CTCAG 4 cut(s) 24, 890, 1069, 1121
BspEI TCCGGA 1 cut(s) 539
BspFNI CGCG 1 cut(s) 304
BspLI GGNNCC 2 cut(s) 312, 1264
BspMAI CTGCAG 3 cut(s) 700, 1048, 1543
BspPI GGATC 3 cut(s) 881, 905, 1754
BspT107I GGYRCC 1 cut(s) 310
BspTNI GGTCTC 2 cut(s) 1489, 1683
BsrDI GCAATG 3 cut(s) 218, 257, 1338
BsrFI RCCGGY 3 cut(s) 106, 307, 1692
BsrGI TGTACA 1 cut(s) 964
BsrI ACTGG 3 cut(s) 767, 917, 953
BssAI RCCGGY 3 cut(s) 106, 307, 1692
BssECI CCNNGG 2 cut(s) 340, 1258
BssNI GRCGYC 1 cut(s) 416
Bst2UI CCWGG 2 cut(s) 1260, 1607
Bst4CI ACNGT 4 cut(s) 95, 471, 925, 969
BstACI GRCGYC 1 cut(s) 416
BstAUI TGTACA 1 cut(s) 964
BstC8I GCNNGC 2 cut(s) 505, 1041
BstDEI CTNAG 8 cut(s) 32, 320, 498, 877, 907, 1077, 1097, 1108
BstENI CCTNNNNNAGG 1 cut(s) 1610
BstF5I GGATG 3 cut(s) 241, 1615, 1705
BstFNI CGCG 1 cut(s) 304
BstHHI GCGC 3 cut(s) 304, 744, 757
BstMAI GTCTC 3 cut(s) 1489, 1655, 1683
BstMCI CGRYCG 1 cut(s) 308
BstMWI GCNNNNNNNGC 8 cut(s) 229, 268, 310, 500, 715, 1052, 1073, 1532
BstNI CCWGG 2 cut(s) 1260, 1607
BstNSI RCATGY 1 cut(s) 761
BstSCI CCNGG 4 cut(s) 339, 340, 1258, 1605
BstSFI CTRYAG 3 cut(s) 696, 1044, 1539
BstUI CGCG 1 cut(s) 304
BstV1I GCAGC 6 cut(s) 682, 756, 913, 1030, 1266, 1340
BstX2I RGATCY 4 cut(s) 376, 519, 873, 910
BstYI RGATCY 4 cut(s) 376, 519, 873, 910
BstZI CGGCCG 1 cut(s) 305
BsuRI GGCC 7 cut(s) 86, 163, 307, 345, 494, 503, 935
BtsCI GGATG 3 cut(s) 241, 1615, 1705
BtsI GCAGTG 1 cut(s) 1053
BtsIMutI CAGTG 4 cut(s) 885, 924, 974, 1053
Cac8I GCNNGC 2 cut(s) 505, 1041
CaiI CAGNNNCTG 1 cut(s) 695
CfoI GCGC 3 cut(s) 304, 744, 757
Cfr10I RCCGGY 3 cut(s) 106, 307, 1692
Cfr13I GGNCC 7 cut(s) 85, 162, 343, 492, 502, 537, 686
Cfr9I CCCGGG 1 cut(s) 340
CseI GACGC 1 cut(s) 405
Csp6I GTAC 6 cut(s) 883, 965, 1101, 1427, 1437, 1769
CspAI ACCGGT 2 cut(s) 106, 1692
CviAII CATG 6 cut(s) 133, 241, 719, 758, 1317, 1562
CviQI GTAC 6 cut(s) 883, 965, 1101, 1427, 1437, 1769
DdeI CTNAG 8 cut(s) 32, 320, 498, 877, 907, 1077, 1097, 1108
DraI TTTAAA 1 cut(s) 409
DrdI GACNNNNNNGTC 1 cut(s) 586
DriI GACNNNNNGTC 1 cut(s) 1668
DseDI GACNNNNNNGTC 1 cut(s) 586
EaeI YGGCCR 2 cut(s) 305, 933
EagI CGGCCG 1 cut(s) 305
Eam1105I GACNNNNNGTC 1 cut(s) 1668
Ecl136II GAGCTC 1 cut(s) 603
EclXI CGGCCG 1 cut(s) 305
Eco24I GRGCYC 1 cut(s) 605
Eco31I GGTCTC 2 cut(s) 1489, 1683
Eco47I GGWCC 2 cut(s) 537, 686
Eco52I CGGCCG 1 cut(s) 305
Eco53kI GAGCTC 1 cut(s) 603
Eco57I CTGAAG 1 cut(s) 1796
Eco88I CYCGRG 1 cut(s) 340
EcoICRI GAGCTC 1 cut(s) 603
EcoNI CCTNNNNNAGG 1 cut(s) 1610
EcoO109I RGGNCCY 2 cut(s) 85, 492
EcoRII CCWGG 2 cut(s) 1258, 1605
EcoT38I GRGCYC 1 cut(s) 605
FaeI CATG 6 cut(s) 136, 244, 722, 761, 1320, 1565
FalI AAGNNNNNCTT 4 cut(s) 141, 173, 1399, 1431
FaqI GGGAC 1 cut(s) 323
FatI CATG 6 cut(s) 132, 240, 718, 757, 1316, 1561
FauI CCCGC 2 cut(s) 512, 714
FauNDI CATATG 1 cut(s) 1339
FbaI TGATCA 1 cut(s) 835
FblI GTMKAC 2 cut(s) 1293, 1833
Fnu4HI GCNGC 7 cut(s) 305, 696, 745, 902, 1044, 1255, 1329
FokI GGATG 3 cut(s) 248, 1622, 1712
FriOI GRGCYC 1 cut(s) 605
Fsp4HI GCNGC 7 cut(s) 305, 696, 745, 902, 1044, 1255, 1329
FspAI RTGCGCAY 1 cut(s) 756
FspBI CTAG 5 cut(s) 27, 266, 738, 843, 1250
FspI TGCGCA 1 cut(s) 756
GlaI GCGC 3 cut(s) 303, 743, 756
GluI GCNGC 7 cut(s) 305, 696, 745, 902, 1044, 1255, 1329
GsuI CTGGAG 3 cut(s) 210, 750, 900
HaeIII GGCC 7 cut(s) 86, 163, 307, 345, 494, 503, 935
HapII CCGG 6 cut(s) 107, 308, 341, 540, 1297, 1693
HgaI GACGC 1 cut(s) 405
HhaI GCGC 3 cut(s) 304, 744, 757
Hin1I GRCGYC 1 cut(s) 416
Hin1II CATG 6 cut(s) 136, 244, 722, 761, 1320, 1565
Hin6I GCGC 3 cut(s) 302, 742, 755
HinP1I GCGC 3 cut(s) 302, 742, 755
HincII GTYRAC 2 cut(s) 559, 654
HindII GTYRAC 2 cut(s) 559, 654
HindIII AAGCTT 2 cut(s) 53, 1734
HinfI GANTC 5 cut(s) 623, 997, 1631, 1640, 1721
HpaII CCGG 6 cut(s) 107, 308, 341, 540, 1297, 1693
HphI GGTGA 5 cut(s) 107, 164, 560, 589, 1525
Hpy166II GTNNAC 6 cut(s) 559, 654, 883, 1294, 1439, 1834
Hpy188III TCNNGA 8 cut(s) 47, 124, 227, 540, 591, 606, 1172, 1364
Hpy8I GTNNAC 6 cut(s) 559, 654, 883, 1294, 1439, 1834
HpyAV CCTTC 8 cut(s) 143, 178, 457, 666, 989, 1121, 1375, 1510
HpyCH4III ACNGT 4 cut(s) 95, 471, 925, 969
HpyF10VI GCNNNNNNNGC 8 cut(s) 229, 268, 310, 500, 715, 1052, 1073, 1532
HpyF3I CTNAG 8 cut(s) 32, 320, 498, 877, 907, 1077, 1097, 1108
Hsp92I GRCGYC 1 cut(s) 416
Hsp92II CATG 6 cut(s) 136, 244, 722, 761, 1320, 1565
HspAI GCGC 3 cut(s) 302, 742, 755
Kpn2I TCCGGA 1 cut(s) 539
Ksp22I TGATCA 1 cut(s) 835
LmnI GCTCC 3 cut(s) 126, 675, 1135
Lsp1109I GCAGC 6 cut(s) 682, 756, 913, 1030, 1266, 1340
LweI GCATC 4 cut(s) 138, 184, 1147, 1456
MaeI CTAG 5 cut(s) 27, 266, 738, 843, 1250
MaeIII GTNAC 6 cut(s) 74, 577, 919, 944, 994, 1601
MfeI CAATTG 1 cut(s) 272
MflI RGATCY 4 cut(s) 376, 519, 873, 910
MhlI GDGCHC 1 cut(s) 605
MlsI TGGCCA 1 cut(s) 935
MluNI TGGCCA 1 cut(s) 935
MlyI GAGTC 1 cut(s) 991
MmeI TCCRAC 6 cut(s) 273, 343, 888, 1010, 1666, 1677
Mox20I TGGCCA 1 cut(s) 935
MroI TCCGGA 1 cut(s) 539
MroXI GAANNNNTTC 2 cut(s) 787, 1630
MscI TGGCCA 1 cut(s) 935
MseI TTAA 9 cut(s) 408, 927, 1016, 1155, 1196, 1323, 1449, 1617, 1677
Msp20I TGGCCA 1 cut(s) 935
MspI CCGG 6 cut(s) 107, 308, 341, 540, 1297, 1693
MspR9I CCNGG 4 cut(s) 341, 342, 1260, 1607
MunI CAATTG 1 cut(s) 272
Mva1269I GAATGC 2 cut(s) 1574, 1822
MvaI CCWGG 2 cut(s) 1260, 1607
MvnI CGCG 1 cut(s) 304
MwoI GCNNNNNNNGC 8 cut(s) 229, 268, 310, 500, 715, 1052, 1073, 1532
NciI CCSGG 2 cut(s) 341, 342
NdeI CATATG 1 cut(s) 1339
NlaIII CATG 6 cut(s) 136, 244, 722, 761, 1320, 1565
NlaIV GGNNCC 2 cut(s) 312, 1264
NmeAIII GCCGAG 1 cut(s) 1684
NmuCI GTSAC 4 cut(s) 74, 577, 919, 994
NsbI TGCGCA 1 cut(s) 756
NspI RCATGY 1 cut(s) 761
PctI GAATGC 2 cut(s) 1574, 1822
PdmI GAANNNNTTC 2 cut(s) 787, 1630
PfeI GAWTC 4 cut(s) 623, 1631, 1640, 1721
PinAI ACCGGT 2 cut(s) 106, 1692
PkrI GCNGC 7 cut(s) 306, 697, 746, 903, 1045, 1256, 1330
PleI GAGTC 1 cut(s) 991
PpsI GAGTC 1 cut(s) 991
PshBI ATTAAT 1 cut(s) 1196
Psp124BI GAGCTC 1 cut(s) 605
Psp6I CCWGG 2 cut(s) 1258, 1605
PspGI CCWGG 2 cut(s) 1258, 1605
PspN4I GGNNCC 2 cut(s) 312, 1264
PspPI GGNCC 7 cut(s) 85, 162, 343, 492, 502, 537, 686
PstI CTGCAG 3 cut(s) 700, 1048, 1543
PstNI CAGNNNCTG 1 cut(s) 695
PsuI RGATCY 4 cut(s) 376, 519, 873, 910
RsaI GTAC 6 cut(s) 884, 966, 1102, 1428, 1438, 1770
RsaNI GTAC 6 cut(s) 883, 965, 1101, 1427, 1437, 1769
SacI GAGCTC 1 cut(s) 605
SaqAI TTAA 9 cut(s) 408, 927, 1016, 1155, 1196, 1323, 1449, 1617, 1677
SatI GCNGC 7 cut(s) 305, 696, 745, 902, 1044, 1255, 1329
Sau96I GGNCC 7 cut(s) 85, 162, 343, 492, 502, 537, 686
SchI GAGTC 1 cut(s) 991
ScrFI CCNGG 4 cut(s) 341, 342, 1260, 1607
SduI GDGCHC 1 cut(s) 605
SfaNI GCATC 4 cut(s) 138, 184, 1147, 1456
SfcI CTRYAG 3 cut(s) 696, 1044, 1539
SfiI GGCCNNNNNGGCC 1 cut(s) 500
SinI GGWCC 2 cut(s) 537, 686
SmaI CCCGGG 1 cut(s) 342
SmlI CTYRAG 3 cut(s) 47, 523, 604
SmoI CTYRAG 3 cut(s) 47, 523, 604
SsiI CCGC 5 cut(s) 304, 505, 546, 707, 1533
SspI AATATT 1 cut(s) 1824
SspMI CTAG 5 cut(s) 27, 266, 738, 843, 1250
SstI GAGCTC 1 cut(s) 605
StyD4I CCNGG 4 cut(s) 339, 340, 1258, 1605
TaaI ACNGT 4 cut(s) 95, 471, 925, 969
TaqI TCGA 7 cut(s) 100, 285, 481, 590, 1164, 1192, 1634
TatI WGTACW 2 cut(s) 964, 1100
TauI GCSGC 1 cut(s) 307
TfiI GAWTC 4 cut(s) 623, 1631, 1640, 1721
Tru1I TTAA 9 cut(s) 408, 927, 1016, 1155, 1196, 1323, 1449, 1617, 1677
Tru9I TTAA 9 cut(s) 408, 927, 1016, 1155, 1196, 1323, 1449, 1617, 1677
TscAI CASTG 4 cut(s) 885, 924, 974, 1053
TseFI GTSAC 4 cut(s) 74, 577, 919, 994
TseI GCWGC 6 cut(s) 695, 744, 901, 1043, 1254, 1328
Tsp45I GTSAC 4 cut(s) 74, 577, 919, 994
TspDTI ATGAA 4 cut(s) 1175, 1394, 1581, 1829
TspGWI ACGGA 1 cut(s) 1134
TspMI CCCGGG 1 cut(s) 340
TspRI CASTG 4 cut(s) 885, 924, 974, 1053
VpaK11BI GGWCC 2 cut(s) 537, 686
VspI ATTAAT 1 cut(s) 1196
XagI CCTNNNNNAGG 1 cut(s) 1610
XapI RAATTY 2 cut(s) 476, 1157
XceI RCATGY 1 cut(s) 761
XmaI CCCGGG 1 cut(s) 340
XmiI GTMKAC 2 cut(s) 1293, 1833
XmnI GAANNNNTTC 2 cut(s) 787, 1630
XspI CTAG 5 cut(s) 27, 266, 738, 843, 1250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.