Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002360

Physical Location & Seq

Genomic Coordinates Reverse (-)

62897381 .. 62907826

Gene Structure 10446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00212440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGATGAAGATTTAAGCGAAAAGGAGTCGTTGCTGGCTCGCATTCAGCAGGTGGAACATGAGCGTGATGAATTACGTAAAGACATCGAACAATTGTGTATGCAGCAAGCTGGGCCAGGCTACCTTGTTGTGGCTACTAAGATGCATTTCCAAAGGACAGCTGGCTTGGAGCAGGAGATTGAGAACCTGAAAAAGAAGCTAGCTACTTGCTCAAGAGAGAATGTGAATCTTCAAGAGGAGCTCTCTGAGGCTTATAGAATCAAAGGCCAGTTGGCTGATTTGCATAATGCAGAGGTTGCAAAGAATTTGGAAGCTGAGAAGCAGCTTAAATTTTTCCAGGGCTGTGTAGCTGCAGCTTTTGCTGAACGGGATCAGTCCATTATGGAGGCTGAGACGGCTAGGGAGAAGGAGGAGCTCATGTCAAAGAAATTGAGTGAGATAGAGAAGAGGTTAGAAGAGCATACTGCAGATTGTTTTGAACAGAAGAAACTTAATGATAAATTGCAAACTGATTTAGCAATGCAAGAGGAGCAGAATGCAACTTTTAAGAAGGTCATCGATAAGTTTTATGAGATCAGGCAGGATTCTTCGGAGGGATTTGGGGATACAAGTTGGGACACCAAATGTGCATGCCTTTTGGATGATCCTGCAGAATGGTGGAGTTTCAATGACACTTCTACATCTAAATATATTAGTTCATTAGAAGAAGAGCTCGAGAGGGTGAGGATCTCTGCCGGTAATCTTCAAAACAGGCTACGAGTGGGTTTGGAAATTGAAAATCATTTAAAGAAGAGAGTTTCGGAATTGGAAAAGAAGAAAATCCGTTCAGATGGAATGATAAAAAAGGAGATGGCAGAGTTACGTCATCACCATTCTCAGCATAAAGTTCACATCATGAGTTTACTTAATGAGGGAAGCAGTTGTATCAAATCAATAATTGATGCAGTGGAGAAAAAGTGTAGGCAAATTGATGCAAGCAGACTACAAAAGTTGGAGCCACCTATGGGAGATGTAAAGCAAGGCGAATCTGAATGTCAAGATGTACATGAAATAACCGATGCTGATCCCAAAGTGGATGGTGACCCTAGCTTATCAGACATGGTGGCAGTTGGGGAGGGTGATTTCTCTAGGGCCCGTGCACAGGCACTGCAAGACAAGGTGTTCTGCAAAGATGGTGACCCTAGCTTATCAGACATGGTGGCAGTTGGGGAGGGTGATTCCTCTAAAGCCCTTGCACAGGCACTGGAAGACAAGGTTGCAACGTTATTGCTTTTATCACAGCAGGAAGAAAGACATTTACTGGACAGAAATGTGAATGCAGCTCTTCAAAGTAAAATAGATGAGCTTCAGAGAAACCTATTGCAGGTTACCAATGAGAAGGTCCAAGCTCTAATGGAGATGGCACAATTAAAGCAGGAACATCATCAACTCAAAGAGAGAATCGGTCAGGAGACGAAAAGAGGCAATTCATCTGCTCAAGTTGGGGACAGGAGAGTAGTTACACATGAAAGAGGAGGAAAACTAAAGAGCTTGCTGAAGAAAACGTACTTGAACCGTTGGGTTGGAAATCTAGACCTTAGGGGAAATGAAGCTGAATCTGACCTAAATAGCATGGAGTTTGTGAGGATGAAGATTGAAAATGCGACCCTTAGGGAAACCATTGGAAGTATCGAACATCTGACTACTACAGTTCATAGGCTTCGTCTATCGCTTTTAAAGGCCAAGGAGATGGTGACTTCTGGAGACTCGATGCTTACTAGCATGTTAGAAACTTTAGACAATATTATTAACGAGGCAAAACTAGTGAAGACTGCACTTGGAAGTTCCCTACCACTTAGTTGGTCAGCAGAAGAAGATGTGGAATTCGGCGGTCATAGTGTTAGCAGTGAGCCCAGCCATGAGAAGATAGATTCAGTTTATGCTGTGGGGTTTGAGATGGTGGAACTCCTGATATTAGCATCGCAGATATTAAAGGACAACACAAGCAAAAGTGGGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

666

Amino Acids

75.16

Weight (kDa)

5.28

Isoelectric Point (pI)

46.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14680 AT2G14680 AT2G14680 AT2G14680 AT2G14680 AT2G14680 AT2G14680 AT2G14680
fragaria_vesca	FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770
malus_domestica	MD05G1101600.v1.1 MD10G1106700.v1.1
prunus_persica	Prupe.8G146100_v2.0.a1 Prupe.8G146100_v2.0.a1
pyrus_communis	pycom05g09990 pycom10g09190
rosa_chinensis	RchiOBHm_Chr6g0252731
rosa_laevigata	RLG00000015066 RLG00000015072
rosa_multiflora	Rmu_sc0000829.1_g000045 Rmu_sc0010886.1_g000001
rosa_roxburghii	Rroxscaffold_7G00212440
rosa_rugosa	Rorug05G0538400
rosa_samantha	Rh6AG054600 Rh6BG048500 Rh6CG047500 Rh6DG043000
rosa_wichuraiana	Rw6G004930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	40
Acc36I	ACCTGC	2 cut(s)	40, 1354
AciI	CCGC	1 cut(s)	1869
AclI	AACGTT	1 cut(s)	1262
AclWI	GGATC	4 cut(s)	378, 638, 734, 1058
AcsI	RAATTY	3 cut(s)	304, 329, 1862
AcuI	CTGAAG	2 cut(s)	1331, 1556
AfaI	GTAC	2 cut(s)	1044, 1547
AfiI	CCNNNNNNNGG	5 cut(s)	130, 1004, 1141, 1237, 1363
AgsI	TTSAA	8 cut(s)	233, 479, 667, 746, 776, 1328, 1552, 1637
AhlI	ACTAGT	1 cut(s)	1801
AjnI	CCWGG	2 cut(s)	115, 336
Alw21I	GWGCWC	4 cut(s)	243, 417, 714, 1141
Alw26I	GTCTC	3 cut(s)	386, 1445, 1737
Alw44I	GTGCAC	1 cut(s)	1137
AlwI	GGATC	4 cut(s)	378, 638, 734, 1058
AlwNI	CAGNNNCTG	2 cut(s)	1147, 1243
Ama87I	CYCGRG	1 cut(s)	713
AoxI	GGCC	4 cut(s)	113, 265, 1131, 1719
ApaI	GGGCCC	1 cut(s)	1135
ApaLI	GTGCAC	1 cut(s)	1137
ApeKI	GCWGC	5 cut(s)	103, 322, 350, 353, 1319
ApoI	RAATTY	3 cut(s)	304, 329, 1862
AspS9I	GGNCC	5 cut(s)	113, 1131, 1132, 1381, 1995
AsuHPI	GGTGA	7 cut(s)	733, 860, 1091, 1130, 1187, 1226, 1744
AsuNHI	GCTAGC	1 cut(s)	199
AvaI	CYCGRG	1 cut(s)	713
AvaII	GGWCC	2 cut(s)	1381, 1995
AxyI	CCTNAGG	2 cut(s)	1577, 1649
BaeGI	GKGCMC	2 cut(s)	1135, 1141
BanII	GRGCYC	5 cut(s)	243, 417, 714, 1135, 1893
BarI	GAAGNNNNNNTAC	2 cut(s)	1529, 1561
BbsI	GAAGAC	2 cut(s)	1254, 1814
Bbv12I	GWGCWC	4 cut(s)	243, 417, 714, 1141
BbvI	GCAGC	5 cut(s)	115, 334, 337, 365, 1331
BccI	CCATC	7 cut(s)	824, 844, 1070, 1166, 1393, 1723, 1930
BceAI	ACGGC	1 cut(s)	411
BciT130I	CCWGG	2 cut(s)	117, 338
BciVI	GTATCC	1 cut(s)	598
BcoDI	GTCTC	3 cut(s)	386, 1445, 1737
BcuI	ACTAGT	1 cut(s)	1801
BfaI	CTAG	8 cut(s)	200, 399, 1086, 1128, 1182, 1571, 1758, 1802
BfmI	CTRYAG	4 cut(s)	351, 465, 648, 1686
BfuAI	ACCTGC	2 cut(s)	40, 1354
BfuI	GTATCC	1 cut(s)	598
BisI	GCNGC	5 cut(s)	104, 323, 351, 354, 1320
BlsI	GCNGC	5 cut(s)	105, 324, 352, 355, 1321
Bme1390I	CCNGG	2 cut(s)	117, 338
Bme18I	GGWCC	2 cut(s)	1381, 1995
BmeT110I	CYCGRG	1 cut(s)	713
BmgT120I	GGNCC	5 cut(s)	113, 1131, 1132, 1381, 1995
BmiI	GGNNCC	3 cut(s)	996, 1133, 1996
BmrFI	CCNGG	2 cut(s)	117, 338
BmsI	GCATC	6 cut(s)	132, 931, 961, 1048, 1740, 1967
BmtI	GCTAGC	1 cut(s)	203
BpiI	GAAGAC	2 cut(s)	1254, 1814
BplI	GAGNNNNNCTC	2 cut(s)	227, 259
BpmI	CTGGAG	1 cut(s)	1761
BpuEI	CTTGAG	2 cut(s)	196, 1461
Bsa29I	ATCGAT	1 cut(s)	558
BsaAI	YACGTR	1 cut(s)	77
BsaBI	GATNNNNATC	1 cut(s)	1062
BsaJI	CCNNGG	2 cut(s)	337, 1722
BsaXI	ACNNNNNCTCC	4 cut(s)	404, 434, 941, 971
Bsc4I	CCNNNNNNNGG	5 cut(s)	130, 1004, 1141, 1237, 1363
Bse118I	RCCGGY	1 cut(s)	734
Bse1I	ACTGG	3 cut(s)	268, 1248, 1305
Bse21I	CCTNAGG	2 cut(s)	1577, 1649
Bse3DI	GCAATG	1 cut(s)	525
Bse8I	GATNNNNATC	1 cut(s)	1062
BseBI	CCWGG	2 cut(s)	117, 338
BseCI	ATCGAT	1 cut(s)	558
BseDI	CCNNGG	2 cut(s)	337, 1722
BseGI	GGATG	4 cut(s)	10, 646, 1081, 1632
BseJI	GATNNNNATC	1 cut(s)	1062
BseLI	CCNNNNNNNGG	5 cut(s)	130, 1004, 1141, 1237, 1363
BseMI	GCAATG	1 cut(s)	525
BseMII	CTCAG	4 cut(s)	237, 306, 381, 890
BseNI	ACTGG	3 cut(s)	268, 1248, 1305
BseRI	GAGGAG	4 cut(s)	251, 425, 542, 1527
BseSI	GKGCMC	2 cut(s)	1135, 1141
BseXI	GCAGC	5 cut(s)	115, 334, 337, 365, 1331
BseYI	CCCAGC	2 cut(s)	110, 1892
BsgI	GTGCAG	1 cut(s)	1797
BshFI	GGCC	4 cut(s)	115, 267, 1133, 1721
BshVI	ATCGAT	1 cut(s)	558
BsiHKAI	GWGCWC	4 cut(s)	243, 417, 714, 1141
BsiHKCI	CYCGRG	1 cut(s)	713
BsiSI	CCGG	1 cut(s)	735
BslFI	GGGAC	2 cut(s)	629, 1499
BslI	CCNNNNNNNGG	5 cut(s)	130, 1004, 1141, 1237, 1363
BsmAI	GTCTC	3 cut(s)	386, 1445, 1737
BsmBI	CGTCTC	2 cut(s)	386, 1445
BsmFI	GGGAC	2 cut(s)	629, 1499
BsmI	GAATGC	3 cut(s)	42, 541, 1321
BsnI	GGCC	4 cut(s)	115, 267, 1133, 1721
BsoBI	CYCGRG	1 cut(s)	713
Bsp120I	GGGCCC	1 cut(s)	1131
Bsp1286I	GDGCHC	6 cut(s)	243, 417, 714, 1135, 1141, 1893
Bsp1407I	TGTACA	1 cut(s)	1042
Bsp143I	GATC	5 cut(s)	370, 573, 643, 726, 1063
BspACI	CCGC	1 cut(s)	1869
BspANI	GGCC	4 cut(s)	115, 267, 1133, 1721
BspCNI	CTCAG	4 cut(s)	238, 307, 382, 889
BspDI	ATCGAT	1 cut(s)	558
BspHI	TCATGA	1 cut(s)	894
BspLI	GGNNCC	3 cut(s)	996, 1133, 1996
BspMAI	CTGCAG	3 cut(s)	355, 469, 652
BspMI	ACCTGC	2 cut(s)	40, 1354
BspOI	GCTAGC	1 cut(s)	203
BspPI	GGATC	4 cut(s)	378, 638, 734, 1058
BspQI	GCTCTTC	3 cut(s)	450, 702, 1329
BsrDI	GCAATG	1 cut(s)	525
BsrFI	RCCGGY	1 cut(s)	734
BsrGI	TGTACA	1 cut(s)	1042
BsrI	ACTGG	3 cut(s)	268, 1248, 1305
BssAI	RCCGGY	1 cut(s)	734
BssECI	CCNNGG	2 cut(s)	337, 1722
BssMI	GATC	5 cut(s)	370, 573, 643, 726, 1063
BssT1I	CCWWGG	1 cut(s)	1722
Bst2UI	CCWGG	2 cut(s)	117, 338
Bst4CI	ACNGT	2 cut(s)	1556, 1690
Bst6I	CTCTTC	5 cut(s)	440, 450, 702, 785, 1329
BstAPI	GCANNNNNTGC	2 cut(s)	296, 359
BstAUI	TGTACA	1 cut(s)	1042
BstBAI	YACGTR	1 cut(s)	77
BstC8I	GCNNGC	8 cut(s)	36, 40, 108, 163, 201, 631, 976, 1532
BstDEI	CTNAG	8 cut(s)	138, 246, 315, 390, 876, 1577, 1649, 1835
BstEII	GGTNACC	3 cut(s)	1079, 1175, 1366
BstENI	CCTNNNNNAGG	2 cut(s)	1235, 1361
BstF5I	GGATG	4 cut(s)	10, 646, 1081, 1632
BstKTI	GATC	5 cut(s)	373, 576, 646, 729, 1066
BstMAI	GTCTC	3 cut(s)	386, 1445, 1737
BstMBI	GATC	5 cut(s)	370, 573, 643, 726, 1063
BstMWI	GCNNNNNNNGC	5 cut(s)	112, 296, 359, 395, 529
BstNI	CCWGG	2 cut(s)	117, 338
BstNSI	RCATGY	2 cut(s)	633, 1765
BstPI	GGTNACC	3 cut(s)	1079, 1175, 1366
BstSCI	CCNGG	2 cut(s)	115, 336
BstSFI	CTRYAG	4 cut(s)	351, 465, 648, 1686
BstSLI	GKGCMC	2 cut(s)	1135, 1141
BstSNI	TACGTA	1 cut(s)	77
BstV1I	GCAGC	5 cut(s)	115, 334, 337, 365, 1331
BstV2I	GAAGAC	2 cut(s)	1254, 1814
BstX2I	RGATCY	1 cut(s)	726
BstXI	CCANNNNNNTGG	2 cut(s)	1729, 1839
BstYI	RGATCY	1 cut(s)	726
Bsu15I	ATCGAT	1 cut(s)	558
Bsu36I	CCTNAGG	2 cut(s)	1577, 1649
BsuI	GTATCC	1 cut(s)	598
BsuRI	GGCC	4 cut(s)	115, 267, 1133, 1721
BsuTUI	ATCGAT	1 cut(s)	558
BtgZI	GCGATG	1 cut(s)	1944
BtsCI	GGATG	4 cut(s)	10, 646, 1081, 1632
BtsI	GCAGTG	3 cut(s)	951, 1145, 1891
BtsIMutI	CAGTG	4 cut(s)	951, 1145, 1241, 1891
BveI	ACCTGC	2 cut(s)	40, 1354
Cac8I	GCNNGC	8 cut(s)	36, 40, 108, 163, 201, 631, 976, 1532
CaiI	CAGNNNCTG	2 cut(s)	1147, 1243
CciI	TCATGA	1 cut(s)	894
Cfr10I	RCCGGY	1 cut(s)	734
Cfr13I	GGNCC	5 cut(s)	113, 1131, 1132, 1381, 1995
ClaI	ATCGAT	1 cut(s)	558
Csp6I	GTAC	2 cut(s)	1043, 1546
CviQI	GTAC	2 cut(s)	1043, 1546
DdeI	CTNAG	8 cut(s)	138, 246, 315, 390, 876, 1577, 1649, 1835
DpnI	GATC	5 cut(s)	372, 575, 645, 728, 1065
DpnII	GATC	5 cut(s)	370, 573, 643, 726, 1063
DraI	TTTAAA	2 cut(s)	786, 1716
Eam1104I	CTCTTC	5 cut(s)	440, 450, 702, 785, 1329
EarI	CTCTTC	5 cut(s)	440, 450, 702, 785, 1329
Ecl136II	GAGCTC	3 cut(s)	241, 415, 712
Eco105I	TACGTA	1 cut(s)	77
Eco130I	CCWWGG	1 cut(s)	1722
Eco24I	GRGCYC	5 cut(s)	243, 417, 714, 1135, 1893
Eco47I	GGWCC	2 cut(s)	1381, 1995
Eco53kI	GAGCTC	3 cut(s)	241, 415, 712
Eco57I	CTGAAG	2 cut(s)	1331, 1556
Eco81I	CCTNAGG	2 cut(s)	1577, 1649
Eco88I	CYCGRG	1 cut(s)	713
Eco91I	GGTNACC	3 cut(s)	1079, 1175, 1366
EcoICRI	GAGCTC	3 cut(s)	241, 415, 712
EcoNI	CCTNNNNNAGG	2 cut(s)	1235, 1361
EcoO109I	RGGNCCY	2 cut(s)	1131, 1995
EcoO65I	GGTNACC	3 cut(s)	1079, 1175, 1366
EcoRI	GAATTC	1 cut(s)	1862
EcoRII	CCWGG	2 cut(s)	115, 336
EcoT14I	CCWWGG	1 cut(s)	1722
EcoT22I	ATGCAT	1 cut(s)	147
EcoT38I	GRGCYC	5 cut(s)	243, 417, 714, 1135, 1893
ErhI	CCWWGG	1 cut(s)	1722
Esp3I	CGTCTC	2 cut(s)	386, 1445
FaqI	GGGAC	2 cut(s)	629, 1499
Fnu4HI	GCNGC	5 cut(s)	104, 323, 351, 354, 1320
FokI	GGATG	4 cut(s)	17, 653, 1088, 1639
FriOI	GRGCYC	5 cut(s)	243, 417, 714, 1135, 1893
Fsp4HI	GCNGC	5 cut(s)	104, 323, 351, 354, 1320
FspBI	CTAG	8 cut(s)	200, 399, 1086, 1128, 1182, 1571, 1758, 1802
GluI	GCNGC	5 cut(s)	104, 323, 351, 354, 1320
GsaI	CCCAGC	2 cut(s)	114, 1896
GsuI	CTGGAG	1 cut(s)	1761
HaeIII	GGCC	4 cut(s)	115, 267, 1133, 1721
HapII	CCGG	1 cut(s)	735
HpaII	CCGG	1 cut(s)	735
HphI	GGTGA	7 cut(s)	733, 860, 1091, 1130, 1187, 1226, 1744
Hpy166II	GTNNAC	3 cut(s)	889, 902, 1139
Hpy8I	GTNNAC	3 cut(s)	889, 902, 1139
HpyAV	CCTTC	3 cut(s)	400, 544, 1372
HpyCH4III	ACNGT	2 cut(s)	1556, 1690
HpyCH4IV	ACGT	4 cut(s)	76, 862, 1262, 1544
HpyF10VI	GCNNNNNNNGC	5 cut(s)	112, 296, 359, 395, 529
HpyF3I	CTNAG	8 cut(s)	138, 246, 315, 390, 876, 1577, 1649, 1835
HpySE526I	ACGT	4 cut(s)	76, 862, 1262, 1544
Kzo9I	GATC	5 cut(s)	370, 573, 643, 726, 1063
LguI	GCTCTTC	3 cut(s)	450, 702, 1329
LmnI	GCTCC	5 cut(s)	169, 238, 412, 529, 994
Lsp1109I	GCAGC	5 cut(s)	115, 334, 337, 365, 1331
LweI	GCATC	6 cut(s)	132, 931, 961, 1048, 1740, 1967
MaeI	CTAG	8 cut(s)	200, 399, 1086, 1128, 1182, 1571, 1758, 1802
MaeII	ACGT	4 cut(s)	76, 862, 1262, 1544
MaeIII	GTNAC	6 cut(s)	858, 1079, 1175, 1366, 1498, 1732
MalI	GATC	5 cut(s)	372, 575, 645, 728, 1065
MboI	GATC	5 cut(s)	370, 573, 643, 726, 1063
MfeI	CAATTG	1 cut(s)	92
MflI	RGATCY	1 cut(s)	726
MhlI	GDGCHC	6 cut(s)	243, 417, 714, 1135, 1141, 1893
MlyI	GAGTC	2 cut(s)	35, 1739
MmeI	TCCRAC	2 cut(s)	972, 1543
Mph1103I	ATGCAT	1 cut(s)	147
MslI	CAYNNNNRTG	1 cut(s)	63
MspA1I	CMGCKG	1 cut(s)	161
MspI	CCGG	1 cut(s)	735
MspR9I	CCNGG	2 cut(s)	117, 338
MunI	CAATTG	1 cut(s)	92
Mva1269I	GAATGC	3 cut(s)	42, 541, 1321
MvaI	CCWGG	2 cut(s)	117, 338
MwoI	GCNNNNNNNGC	5 cut(s)	112, 296, 359, 395, 529
NdeII	GATC	5 cut(s)	370, 573, 643, 726, 1063
NheI	GCTAGC	1 cut(s)	199
NlaIV	GGNNCC	3 cut(s)	996, 1133, 1996
NmuCI	GTSAC	3 cut(s)	1079, 1175, 1732
NsiI	ATGCAT	1 cut(s)	147
NspI	RCATGY	2 cut(s)	633, 1765
PaeI	GCATGC	1 cut(s)	633
PaeR7I	CTCGAG	1 cut(s)	713
PagI	TCATGA	1 cut(s)	894
PaqCI	CACCTGC	1 cut(s)	40
PciSI	GCTCTTC	3 cut(s)	450, 702, 1329
PctI	GAATGC	3 cut(s)	42, 541, 1321
PfeI	GAWTC	8 cut(s)	226, 258, 584, 1025, 1217, 1440, 1595, 1910
PkrI	GCNGC	5 cut(s)	105, 324, 352, 355, 1321
PleI	GAGTC	2 cut(s)	34, 1739
PpsI	GAGTC	2 cut(s)	34, 1739
Ppu21I	YACGTR	1 cut(s)	77
PpuMI	RGGWCCY	1 cut(s)	1995
Psp124BI	GAGCTC	3 cut(s)	243, 417, 714
Psp1406I	AACGTT	1 cut(s)	1262
Psp5II	RGGWCCY	1 cut(s)	1995
Psp6I	CCWGG	2 cut(s)	115, 336
PspEI	GGTNACC	3 cut(s)	1079, 1175, 1366
PspFI	CCCAGC	2 cut(s)	110, 1892
PspGI	CCWGG	2 cut(s)	115, 336
PspN4I	GGNNCC	3 cut(s)	996, 1133, 1996
PspOMI	GGGCCC	1 cut(s)	1131
PspPI	GGNCC	5 cut(s)	113, 1131, 1132, 1381, 1995
PspPPI	RGGWCCY	1 cut(s)	1995
PstI	CTGCAG	3 cut(s)	355, 469, 652
PstNI	CAGNNNCTG	2 cut(s)	1147, 1243
PsuI	RGATCY	1 cut(s)	726
PvuII	CAGCTG	1 cut(s)	161
RsaI	GTAC	2 cut(s)	1044, 1547
RsaNI	GTAC	2 cut(s)	1043, 1546
RseI	CAYNNNNRTG	1 cut(s)	63
SacI	GAGCTC	3 cut(s)	243, 417, 714
SapI	GCTCTTC	3 cut(s)	450, 702, 1329
SatI	GCNGC	5 cut(s)	104, 323, 351, 354, 1320
Sau3AI	GATC	5 cut(s)	370, 573, 643, 726, 1063
Sau96I	GGNCC	5 cut(s)	113, 1131, 1132, 1381, 1995
SchI	GAGTC	2 cut(s)	35, 1739
ScrFI	CCNGG	2 cut(s)	117, 338
SduI	GDGCHC	6 cut(s)	243, 417, 714, 1135, 1141, 1893
SfaNI	GCATC	6 cut(s)	132, 931, 961, 1048, 1740, 1967
SfcI	CTRYAG	4 cut(s)	351, 465, 648, 1686
Sfr274I	CTCGAG	1 cut(s)	713
SinI	GGWCC	2 cut(s)	1381, 1995
SlaI	CTCGAG	1 cut(s)	713
SmiMI	CAYNNNNRTG	1 cut(s)	63
SmlI	CTYRAG	3 cut(s)	211, 713, 1476
SmoI	CTYRAG	3 cut(s)	211, 713, 1476
SnaBI	TACGTA	1 cut(s)	77
SpeI	ACTAGT	1 cut(s)	1801
SphI	GCATGC	1 cut(s)	633
SsiI	CCGC	1 cut(s)	1869
SspI	AATATT	1 cut(s)	1783
SspMI	CTAG	8 cut(s)	200, 399, 1086, 1128, 1182, 1571, 1758, 1802
SstI	GAGCTC	3 cut(s)	243, 417, 714
StyD4I	CCNGG	2 cut(s)	115, 336
StyI	CCWWGG	1 cut(s)	1722
TaaI	ACNGT	2 cut(s)	1556, 1690
TaiI	ACGT	4 cut(s)	79, 865, 1265, 1547
TaqI	TCGA	5 cut(s)	87, 558, 714, 1671, 1748
TaqII	GACCGA	1 cut(s)	1433
TatI	WGTACW	1 cut(s)	1042
TfiI	GAWTC	8 cut(s)	226, 258, 584, 1025, 1217, 1440, 1595, 1910
TscAI	CASTG	4 cut(s)	951, 1152, 1248, 1891
TseFI	GTSAC	3 cut(s)	1079, 1175, 1732
TseI	GCWGC	5 cut(s)	103, 322, 350, 353, 1319
Tsp45I	GTSAC	3 cut(s)	1079, 1175, 1732
TspDTI	ATGAA	9 cut(s)	21, 84, 687, 1062, 1458, 1521, 1602, 1643, 1682
TspGWI	ACGGA	1 cut(s)	812
TspRI	CASTG	4 cut(s)	951, 1152, 1248, 1891
VneI	GTGCAC	1 cut(s)	1137
VpaK11BI	GGWCC	2 cut(s)	1381, 1995
XagI	CCTNNNNNAGG	2 cut(s)	1235, 1361
XapI	RAATTY	3 cut(s)	304, 329, 1862
XbaI	TCTAGA	1 cut(s)	1570
XceI	RCATGY	2 cut(s)	633, 1765
XcmI	CCANNNNNNNNNTGG	1 cut(s)	158
XhoI	CTCGAG	1 cut(s)	713
XspI	CTAG	8 cut(s)	200, 399, 1086, 1128, 1182, 1571, 1758, 1802
Zsp2I	ATGCAT	1 cut(s)	147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.