Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0002360

Physical Location & Seq

Genomic Coordinates Forward (+)

4691542 .. 4702126

Gene Structure 10585 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG047500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGGATGAAGATTTAAGCGAAAAGGAGTCGTTGCTGGCTCGCATTCAGCAGGTGGAACATGAGCGTGATGAATTACGTAAAGACATCGAACAATTGTGTATGCAGCAAGCTGGGCCAGGCTACCTTGTTGTGGCTACTAAGATGCATTTTCAAAGGACAGCTGGCTTGGAGCAGGAGATTGAGAACCTAAAAAAGAAGCTAGCTACTTGCTCAAGAGAGAACGTGAATCTTCAAGAGGAGCTCTCTGAGGCTTATAGAATCAAAGGCCAGTTGGCTGATTTGCATAATGCAGAGGTTGCAAAGAATTTGGAAGCTGAGAAGCAGCTTAAATTTTTCCAGGGCTGTGTAGCTGCAGCTTTTGCCGAACGGGATCAGTCCATAATGGAGGCTGAGACGGCTAGAGAGAAAGAGGAGCTCATGTCAAAGAAATTGAGTGAGATAGAGAAGAGGTTAGAAGAGCATACTGCAGATTGTTTTGAACAGAAGGAACTTAATGATAAATTGCAAACTGATTTAGCAATGCAAGAGGAGCAGAATGCAACTTTTAAGAAGGTCATCGATAAGTTTTATGAGATCAGGCAGGATTCTTCAGAGGGATTTGGGGATACAAGTTGGGACACCAAATGTGCATGCCTTTTGGATGATCCTGCAGAATGGTGGAGTTTCAATGACACTTCTACATCTAAATATATTAGTTCATTAGAAGAAGAGCTCGAGAGGGTGAGGATCTCTGCTGGTAATCTTCAAAACAGGCTACGAGTGGGTTTGGAAATTGAAAATCATTTAAAGAGGAGAGTTTCGGAATTGGAAAAGAAGAAAATCCGTTCAGATGGAATGATAAAAAAGGAGATGGCAGAATTACGTCATTACCATTCTCAGCATAAAGTTCACATCATGAGTTTACTTAATGAGGGAAGCAGTTGTATCAAATCAATAATTGATGCAGTGGAGAAAAAGTGTAGGCAAATTGATGCAAGCAGACTACAAAAGTTGGAGCCACCTATGGGAGATGTAAAGCAAGACGAATCTGAATGTCAAGATGTACATGAAATTACAGATGCTGATCCCCAAGTGGTATTTAAGGATGGTAACCCTAGCTTATCAGACATGGTGGCAGTTGGGGACGGTGATTCCTCTAGAGCCCGTGCTCAGGCACTGCAAGACAAGGTGTTCTGCAAAGATGGTGACCCTAGCTTATCAGATATGGTGGCAGTTGGGGAGGGTGATTCCTCTAAAGCCCTTGCACAGGCACTGGAAGACAAGGTTGCAACGTTATTGCTTTTATCACAGCAGGAAGAAAGACATTTACTGGACAGAAATGTGAATGCAGCTCTTCAAAGTAAAATAGATGAGCTTCAGAGAAACCTATTACAGGTTACCAATGAGAAGGTCCAAGCTCTAATGGAGATGGCACAATTAAAGCAGGAATATCATCAACTCAAAGAGTCAGATTTCTTCTTTACTTTTAAAATTGTGTCAATGATATTTTCATTTTGTATGCCACTGCTTGAAATTTTGGTAAAGATGAATAGAGAATTTATAATTCTGGAAATACTTTGTTGGGGACCAAGACCCTGCCAATTGGCATACCCACTTTATCTGGATAAGATAGCAATGTGTCAAAGATCCATACCCTCCCAAAATTTTCCGTTCTTCCAGTGTGATTACATGAACTATCCTGGTTCTTTGAGAAGTATCAGCAACTTTTTTAAAGTACTGCAACCAATAATGTACAGGAGAATGGGTCAGGAGACGAAAAGAGGCAATTCATCTGCTCAAGTTGGGGACAGGAGAGTAGTTACACATGAAAGAGATGGAAAACTAAAGAGCTTGCTGAAGAAAACGTACTTGAGCCGTTGGGTTGGAAATCTAGACCTTAGGGGCAATGAAGCTGAATCTGACCTAAATAGCATGGAGTTTGTGAGGATGAAGATTGAAAATGCAACCCTTAGGGAAACCATTGGAAGTATCGAACATCTGTCTACTACAGTTCATAGGCTTCGTCTATCGCTTTTAAAGGCCAAGGAGATGGTGACTTCTGGAGACTCGATGCTTACTAGCATGTTAGAAACTGTAGACAACATTATTAACGAGGCAAAACTAGTGAAGACCGCACTCGGAAGTTCCCTACCACTTAGTTGGTCAGCAGAAGCAGATGTGGAATTCAGTGGTTATAGTGTTAGCAGTGAGCCTGGTATCGTATATGGGGAGCCCAGCCATGAGAAGATAGATTCAGTTTATGCTGCAGGGTTTGAGATGGTGGAACTCCTGATATTAGCATCGCAGATATTAAAGGACAACACAAGCAAAAGTGGGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

773

Amino Acids

87.89

Weight (kDa)

5.23

Isoelectric Point (pI)

49.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002360)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14680 AT2G14680 AT2G14680 AT2G14680 AT2G14680 AT2G14680 AT2G14680 AT2G14680
fragaria_vesca	FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770 FvH4_2g03770
malus_domestica	MD05G1101600.v1.1 MD10G1106700.v1.1
prunus_persica	Prupe.8G146100_v2.0.a1 Prupe.8G146100_v2.0.a1
pyrus_communis	pycom05g09990 pycom10g09190
rosa_chinensis	RchiOBHm_Chr6g0252731
rosa_laevigata	RLG00000015066 RLG00000015072
rosa_multiflora	Rmu_sc0000829.1_g000045 Rmu_sc0010886.1_g000001
rosa_roxburghii	Rroxscaffold_7G00212440
rosa_rugosa	Rorug05G0538400
rosa_samantha	Rh6AG054600 Rh6BG048500 Rh6CG047500 Rh6DG043000
rosa_wichuraiana	Rw6G004930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1541
AarI	CACCTGC	1 cut(s)	40
Acc36I	ACCTGC	1 cut(s)	40
AccI	GTMKAC	2 cut(s)	1982, 2076
AciI	CCGC	1 cut(s)	2112
AclI	AACGTT	1 cut(s)	1271
AclWI	GGATC	5 cut(s)	378, 638, 734, 1058, 1620
AcsI	RAATTY	6 cut(s)	304, 329, 1512, 1535, 1642, 2162
AcuI	CTGAAG	3 cut(s)	573, 1340, 1856
AfaI	GTAC	4 cut(s)	1044, 1716, 1733, 1847
AfiI	CCNNNNNNNGG	5 cut(s)	130, 1004, 1150, 1246, 1372
AgsI	TTSAA	9 cut(s)	152, 233, 479, 667, 746, 776, 1337, 1511, 1937
AhlI	ACTAGT	1 cut(s)	2101
AjnI	CCWGG	4 cut(s)	115, 336, 1678, 2191
Alw21I	GWGCWC	4 cut(s)	243, 417, 714, 1150
Alw26I	GTCTC	3 cut(s)	386, 1745, 2037
AlwI	GGATC	5 cut(s)	378, 638, 734, 1058, 1620
AlwNI	CAGNNNCTG	3 cut(s)	1061, 1156, 1252
Ama87I	CYCGRG	1 cut(s)	713
AoxI	GGCC	3 cut(s)	113, 265, 2019
ApeKI	GCWGC	6 cut(s)	103, 322, 350, 353, 1328, 2243
ApoI	RAATTY	6 cut(s)	304, 329, 1512, 1535, 1642, 2162
AspS9I	GGNCC	4 cut(s)	113, 1390, 1565, 2316
AsuHPI	GGTGA	5 cut(s)	733, 1139, 1196, 1235, 2044
AsuNHI	GCTAGC	1 cut(s)	199
AvaI	CYCGRG	1 cut(s)	713
AvaII	GGWCC	3 cut(s)	1390, 1565, 2316
AxyI	CCTNAGG	2 cut(s)	1877, 1949
BanII	GRGCYC	5 cut(s)	243, 417, 714, 1144, 2214
BarI	GAAGNNNNNNTAC	2 cut(s)	1829, 1861
BbsI	GAAGAC	2 cut(s)	1263, 2114
Bbv12I	GWGCWC	4 cut(s)	243, 417, 714, 1150
BbvI	GCAGC	6 cut(s)	115, 334, 337, 365, 1340, 2230
BccI	CCATC	8 cut(s)	824, 844, 1079, 1175, 1402, 1808, 2023, 2251
BceAI	ACGGC	2 cut(s)	411, 1839
BciT130I	CCWGG	4 cut(s)	117, 338, 1680, 2193
BciVI	GTATCC	1 cut(s)	598
BcoDI	GTCTC	3 cut(s)	386, 1745, 2037
BcuI	ACTAGT	1 cut(s)	2101
BfaI	CTAG	8 cut(s)	200, 399, 1095, 1137, 1191, 1871, 2058, 2102
BfmI	CTRYAG	6 cut(s)	351, 465, 648, 1986, 2073, 2244
BfuAI	ACCTGC	1 cut(s)	40
BfuI	GTATCC	1 cut(s)	598
BisI	GCNGC	6 cut(s)	104, 323, 351, 354, 1329, 2244
BlsI	GCNGC	6 cut(s)	105, 324, 352, 355, 1330, 2245
BmcAI	AGTACT	1 cut(s)	1716
Bme1390I	CCNGG	4 cut(s)	117, 338, 1680, 2193
Bme18I	GGWCC	3 cut(s)	1390, 1565, 2316
BmeT110I	CYCGRG	1 cut(s)	713
BmgT120I	GGNCC	4 cut(s)	113, 1390, 1565, 2316
BmiI	GGNNCC	4 cut(s)	996, 1566, 2211, 2317
BmrFI	CCNGG	4 cut(s)	117, 338, 1680, 2193
BmsI	GCATC	6 cut(s)	132, 931, 961, 1048, 2040, 2288
BmtI	GCTAGC	1 cut(s)	203
BpiI	GAAGAC	2 cut(s)	1263, 2114
BplI	GAGNNNNNCTC	2 cut(s)	227, 259
BpmI	CTGGAG	1 cut(s)	2061
Bpu10I	CCTNAGC	1 cut(s)	1149
BpuEI	CTTGAG	3 cut(s)	196, 1761, 1870
Bsa29I	ATCGAT	1 cut(s)	558
BsaAI	YACGTR	1 cut(s)	77
BsaBI	GATNNNNATC	1 cut(s)	1062
BsaJI	CCNNGG	2 cut(s)	337, 2022
BsaXI	ACNNNNNCTCC	6 cut(s)	404, 434, 941, 971, 1729, 1759
Bsc4I	CCNNNNNNNGG	5 cut(s)	130, 1004, 1150, 1246, 1372
Bse1I	ACTGG	4 cut(s)	268, 1257, 1314, 1657
Bse21I	CCTNAGG	2 cut(s)	1877, 1949
Bse3DI	GCAATG	3 cut(s)	525, 1620, 1891
Bse8I	GATNNNNATC	1 cut(s)	1062
BseBI	CCWGG	4 cut(s)	117, 338, 1680, 2193
BseCI	ATCGAT	1 cut(s)	558
BseDI	CCNNGG	2 cut(s)	337, 2022
BseGI	GGATG	4 cut(s)	10, 646, 1090, 1932
BseJI	GATNNNNATC	1 cut(s)	1062
BseLI	CCNNNNNNNGG	5 cut(s)	130, 1004, 1150, 1246, 1372
BseMI	GCAATG	3 cut(s)	525, 1620, 1891
BseMII	CTCAG	5 cut(s)	237, 306, 381, 890, 1163
BseNI	ACTGG	4 cut(s)	268, 1257, 1314, 1657
BseRI	GAGGAG	4 cut(s)	251, 425, 542, 805
BseXI	GCAGC	6 cut(s)	115, 334, 337, 365, 1340, 2230
BseYI	CCCAGC	2 cut(s)	110, 2213
BshFI	GGCC	3 cut(s)	115, 267, 2021
BshVI	ATCGAT	1 cut(s)	558
BsiHKAI	GWGCWC	4 cut(s)	243, 417, 714, 1150
BsiHKCI	CYCGRG	1 cut(s)	713
BslFI	GGGAC	4 cut(s)	629, 1136, 1578, 1799
BslI	CCNNNNNNNGG	5 cut(s)	130, 1004, 1150, 1246, 1372
BsmAI	GTCTC	3 cut(s)	386, 1745, 2037
BsmBI	CGTCTC	2 cut(s)	386, 1745
BsmFI	GGGAC	4 cut(s)	629, 1136, 1578, 1799
BsmI	GAATGC	3 cut(s)	42, 541, 1330
BsnI	GGCC	3 cut(s)	115, 267, 2021
BsoBI	CYCGRG	1 cut(s)	713
Bsp1286I	GDGCHC	6 cut(s)	243, 417, 714, 1144, 1150, 2214
Bsp1407I	TGTACA	2 cut(s)	1042, 1731
Bsp143I	GATC	6 cut(s)	370, 573, 643, 726, 1063, 1625
BspACI	CCGC	1 cut(s)	2112
BspANI	GGCC	3 cut(s)	115, 267, 2021
BspCNI	CTCAG	5 cut(s)	238, 307, 382, 889, 1162
BspDI	ATCGAT	1 cut(s)	558
BspHI	TCATGA	1 cut(s)	894
BspLI	GGNNCC	4 cut(s)	996, 1566, 2211, 2317
BspMAI	CTGCAG	4 cut(s)	355, 469, 652, 2248
BspMI	ACCTGC	1 cut(s)	40
BspOI	GCTAGC	1 cut(s)	203
BspPI	GGATC	5 cut(s)	378, 638, 734, 1058, 1620
BspQI	GCTCTTC	3 cut(s)	450, 702, 1338
BsrDI	GCAATG	3 cut(s)	525, 1620, 1891
BsrGI	TGTACA	2 cut(s)	1042, 1731
BsrI	ACTGG	4 cut(s)	268, 1257, 1314, 1657
BssECI	CCNNGG	2 cut(s)	337, 2022
BssMI	GATC	6 cut(s)	370, 573, 643, 726, 1063, 1625
BssT1I	CCWWGG	1 cut(s)	2022
Bst2UI	CCWGG	4 cut(s)	117, 338, 1680, 2193
Bst4CI	ACNGT	3 cut(s)	1127, 1990, 2074
Bst6I	CTCTTC	4 cut(s)	440, 450, 702, 1338
BstAPI	GCANNNNNTGC	2 cut(s)	296, 359
BstAUI	TGTACA	2 cut(s)	1042, 1731
BstBAI	YACGTR	1 cut(s)	77
BstC8I	GCNNGC	8 cut(s)	36, 40, 108, 163, 201, 631, 976, 1832
BstDEI	CTNAG	9 cut(s)	138, 246, 315, 390, 876, 1149, 1877, 1949, 2135
BstEII	GGTNACC	3 cut(s)	1088, 1184, 1375
BstENI	CCTNNNNNAGG	2 cut(s)	1244, 1370
BstF5I	GGATG	4 cut(s)	10, 646, 1090, 1932
BstKTI	GATC	6 cut(s)	373, 576, 646, 729, 1066, 1628
BstMAI	GTCTC	3 cut(s)	386, 1745, 2037
BstMBI	GATC	6 cut(s)	370, 573, 643, 726, 1063, 1625
BstMWI	GCNNNNNNNGC	5 cut(s)	112, 296, 359, 395, 529
BstNI	CCWGG	4 cut(s)	117, 338, 1680, 2193
BstNSI	RCATGY	2 cut(s)	633, 2065
BstPI	GGTNACC	3 cut(s)	1088, 1184, 1375
BstSCI	CCNGG	4 cut(s)	115, 336, 1678, 2191
BstSFI	CTRYAG	6 cut(s)	351, 465, 648, 1986, 2073, 2244
BstSNI	TACGTA	1 cut(s)	77
BstV1I	GCAGC	6 cut(s)	115, 334, 337, 365, 1340, 2230
BstV2I	GAAGAC	2 cut(s)	1263, 2114
BstX2I	RGATCY	2 cut(s)	726, 1625
BstXI	CCANNNNNNTGG	2 cut(s)	2029, 2139
BstYI	RGATCY	2 cut(s)	726, 1625
Bsu15I	ATCGAT	1 cut(s)	558
Bsu36I	CCTNAGG	2 cut(s)	1877, 1949
BsuI	GTATCC	1 cut(s)	598
BsuRI	GGCC	3 cut(s)	115, 267, 2021
BsuTUI	ATCGAT	1 cut(s)	558
BtgZI	GCGATG	1 cut(s)	2265
BtsCI	GGATG	4 cut(s)	10, 646, 1090, 1932
BtsI	GCAGTG	4 cut(s)	951, 1154, 1502, 2191
BtsIMutI	CAGTG	7 cut(s)	951, 1154, 1250, 1502, 1664, 2173, 2191
BveI	ACCTGC	1 cut(s)	40
Cac8I	GCNNGC	8 cut(s)	36, 40, 108, 163, 201, 631, 976, 1832
CaiI	CAGNNNCTG	3 cut(s)	1061, 1156, 1252
CciI	TCATGA	1 cut(s)	894
Cfr13I	GGNCC	4 cut(s)	113, 1390, 1565, 2316
ClaI	ATCGAT	1 cut(s)	558
Csp6I	GTAC	4 cut(s)	1043, 1715, 1732, 1846
CviQI	GTAC	4 cut(s)	1043, 1715, 1732, 1846
DdeI	CTNAG	9 cut(s)	138, 246, 315, 390, 876, 1149, 1877, 1949, 2135
DpnI	GATC	6 cut(s)	372, 575, 645, 728, 1065, 1627
DpnII	GATC	6 cut(s)	370, 573, 643, 726, 1063, 1625
DraI	TTTAAA	4 cut(s)	786, 1468, 1711, 2016
Eam1104I	CTCTTC	4 cut(s)	440, 450, 702, 1338
EarI	CTCTTC	4 cut(s)	440, 450, 702, 1338
Ecl136II	GAGCTC	3 cut(s)	241, 415, 712
Eco105I	TACGTA	1 cut(s)	77
Eco130I	CCWWGG	1 cut(s)	2022
Eco24I	GRGCYC	5 cut(s)	243, 417, 714, 1144, 2214
Eco47I	GGWCC	3 cut(s)	1390, 1565, 2316
Eco53kI	GAGCTC	3 cut(s)	241, 415, 712
Eco57I	CTGAAG	3 cut(s)	573, 1340, 1856
Eco81I	CCTNAGG	2 cut(s)	1877, 1949
Eco88I	CYCGRG	1 cut(s)	713
Eco91I	GGTNACC	3 cut(s)	1088, 1184, 1375
EcoICRI	GAGCTC	3 cut(s)	241, 415, 712
EcoNI	CCTNNNNNAGG	2 cut(s)	1244, 1370
EcoO109I	RGGNCCY	1 cut(s)	2316
EcoO65I	GGTNACC	3 cut(s)	1088, 1184, 1375
EcoRI	GAATTC	1 cut(s)	2162
EcoRII	CCWGG	4 cut(s)	115, 336, 1678, 2191
EcoT14I	CCWWGG	1 cut(s)	2022
EcoT22I	ATGCAT	1 cut(s)	147
EcoT38I	GRGCYC	5 cut(s)	243, 417, 714, 1144, 2214
ErhI	CCWWGG	1 cut(s)	2022
Esp3I	CGTCTC	2 cut(s)	386, 1745
FaqI	GGGAC	4 cut(s)	629, 1136, 1578, 1799
FblI	GTMKAC	2 cut(s)	1982, 2076
Fnu4HI	GCNGC	6 cut(s)	104, 323, 351, 354, 1329, 2244
FokI	GGATG	4 cut(s)	17, 653, 1097, 1939
FriOI	GRGCYC	5 cut(s)	243, 417, 714, 1144, 2214
Fsp4HI	GCNGC	6 cut(s)	104, 323, 351, 354, 1329, 2244
FspBI	CTAG	8 cut(s)	200, 399, 1095, 1137, 1191, 1871, 2058, 2102
GluI	GCNGC	6 cut(s)	104, 323, 351, 354, 1329, 2244
GsaI	CCCAGC	2 cut(s)	114, 2217
GsuI	CTGGAG	1 cut(s)	2061
HaeIII	GGCC	3 cut(s)	115, 267, 2021
HphI	GGTGA	5 cut(s)	733, 1139, 1196, 1235, 2044
Hpy166II	GTNNAC	4 cut(s)	889, 902, 1983, 2077
Hpy8I	GTNNAC	4 cut(s)	889, 902, 1983, 2077
HpyAV	CCTTC	3 cut(s)	478, 544, 1381
HpyCH4III	ACNGT	3 cut(s)	1127, 1990, 2074
HpyCH4IV	ACGT	5 cut(s)	76, 222, 862, 1271, 1844
HpyF10VI	GCNNNNNNNGC	5 cut(s)	112, 296, 359, 395, 529
HpyF3I	CTNAG	9 cut(s)	138, 246, 315, 390, 876, 1149, 1877, 1949, 2135
HpySE526I	ACGT	5 cut(s)	76, 222, 862, 1271, 1844
Kzo9I	GATC	6 cut(s)	370, 573, 643, 726, 1063, 1625
LguI	GCTCTTC	3 cut(s)	450, 702, 1338
LmnI	GCTCC	6 cut(s)	169, 238, 412, 529, 994, 2209
Lsp1109I	GCAGC	6 cut(s)	115, 334, 337, 365, 1340, 2230
LweI	GCATC	6 cut(s)	132, 931, 961, 1048, 2040, 2288
MaeI	CTAG	8 cut(s)	200, 399, 1095, 1137, 1191, 1871, 2058, 2102
MaeII	ACGT	5 cut(s)	76, 222, 862, 1271, 1844
MaeIII	GTNAC	5 cut(s)	1088, 1184, 1375, 1798, 2032
MalI	GATC	6 cut(s)	372, 575, 645, 728, 1065, 1627
MboI	GATC	6 cut(s)	370, 573, 643, 726, 1063, 1625
MfeI	CAATTG	2 cut(s)	92, 1580
MflI	RGATCY	2 cut(s)	726, 1625
MhlI	GDGCHC	6 cut(s)	243, 417, 714, 1144, 1150, 2214
MlyI	GAGTC	3 cut(s)	35, 1454, 2039
MmeI	TCCRAC	2 cut(s)	972, 1843
Mph1103I	ATGCAT	1 cut(s)	147
MslI	CAYNNNNRTG	1 cut(s)	63
MspA1I	CMGCKG	1 cut(s)	161
MspR9I	CCNGG	4 cut(s)	117, 338, 1680, 2193
MunI	CAATTG	2 cut(s)	92, 1580
Mva1269I	GAATGC	3 cut(s)	42, 541, 1330
MvaI	CCWGG	4 cut(s)	117, 338, 1680, 2193
MwoI	GCNNNNNNNGC	5 cut(s)	112, 296, 359, 395, 529
NdeII	GATC	6 cut(s)	370, 573, 643, 726, 1063, 1625
NheI	GCTAGC	1 cut(s)	199
NlaIV	GGNNCC	4 cut(s)	996, 1566, 2211, 2317
NmuCI	GTSAC	2 cut(s)	1184, 2032
NsiI	ATGCAT	1 cut(s)	147
NspI	RCATGY	2 cut(s)	633, 2065
PaeI	GCATGC	1 cut(s)	633
PaeR7I	CTCGAG	1 cut(s)	713
PagI	TCATGA	1 cut(s)	894
PaqCI	CACCTGC	1 cut(s)	40
PciSI	GCTCTTC	3 cut(s)	450, 702, 1338
PctI	GAATGC	3 cut(s)	42, 541, 1330
PfeI	GAWTC	8 cut(s)	226, 258, 584, 1025, 1130, 1226, 1895, 2231
PkrI	GCNGC	6 cut(s)	105, 324, 352, 355, 1330, 2245
PleI	GAGTC	3 cut(s)	34, 1453, 2039
PpsI	GAGTC	3 cut(s)	34, 1453, 2039
Ppu21I	YACGTR	1 cut(s)	77
PpuMI	RGGWCCY	1 cut(s)	2316
PsiI	TTATAA	1 cut(s)	1541
Psp124BI	GAGCTC	3 cut(s)	243, 417, 714
Psp1406I	AACGTT	1 cut(s)	1271
Psp5II	RGGWCCY	1 cut(s)	2316
Psp6I	CCWGG	4 cut(s)	115, 336, 1678, 2191
PspEI	GGTNACC	3 cut(s)	1088, 1184, 1375
PspFI	CCCAGC	2 cut(s)	110, 2213
PspGI	CCWGG	4 cut(s)	115, 336, 1678, 2191
PspN4I	GGNNCC	4 cut(s)	996, 1566, 2211, 2317
PspPI	GGNCC	4 cut(s)	113, 1390, 1565, 2316
PspPPI	RGGWCCY	1 cut(s)	2316
PstI	CTGCAG	4 cut(s)	355, 469, 652, 2248
PstNI	CAGNNNCTG	3 cut(s)	1061, 1156, 1252
PsuI	RGATCY	2 cut(s)	726, 1625
PvuII	CAGCTG	1 cut(s)	161
RsaI	GTAC	4 cut(s)	1044, 1716, 1733, 1847
RsaNI	GTAC	4 cut(s)	1043, 1715, 1732, 1846
RseI	CAYNNNNRTG	1 cut(s)	63
SacI	GAGCTC	3 cut(s)	243, 417, 714
SapI	GCTCTTC	3 cut(s)	450, 702, 1338
SatI	GCNGC	6 cut(s)	104, 323, 351, 354, 1329, 2244
Sau3AI	GATC	6 cut(s)	370, 573, 643, 726, 1063, 1625
Sau96I	GGNCC	4 cut(s)	113, 1390, 1565, 2316
ScaI	AGTACT	1 cut(s)	1716
SchI	GAGTC	3 cut(s)	35, 1454, 2039
ScrFI	CCNGG	4 cut(s)	117, 338, 1680, 2193
SduI	GDGCHC	6 cut(s)	243, 417, 714, 1144, 1150, 2214
SfaNI	GCATC	6 cut(s)	132, 931, 961, 1048, 2040, 2288
SfcI	CTRYAG	6 cut(s)	351, 465, 648, 1986, 2073, 2244
Sfr274I	CTCGAG	1 cut(s)	713
SinI	GGWCC	3 cut(s)	1390, 1565, 2316
SlaI	CTCGAG	1 cut(s)	713
SmiMI	CAYNNNNRTG	1 cut(s)	63
SmlI	CTYRAG	4 cut(s)	211, 713, 1776, 1849
SmoI	CTYRAG	4 cut(s)	211, 713, 1776, 1849
SnaBI	TACGTA	1 cut(s)	77
SpeI	ACTAGT	1 cut(s)	2101
SphI	GCATGC	1 cut(s)	633
SsiI	CCGC	1 cut(s)	2112
SspMI	CTAG	8 cut(s)	200, 399, 1095, 1137, 1191, 1871, 2058, 2102
SstI	GAGCTC	3 cut(s)	243, 417, 714
StyD4I	CCNGG	4 cut(s)	115, 336, 1678, 2191
StyI	CCWWGG	1 cut(s)	2022
TaaI	ACNGT	3 cut(s)	1127, 1990, 2074
TaiI	ACGT	5 cut(s)	79, 225, 865, 1274, 1847
TaqI	TCGA	5 cut(s)	87, 558, 714, 1971, 2048
TatI	WGTACW	3 cut(s)	1042, 1714, 1731
TfiI	GAWTC	8 cut(s)	226, 258, 584, 1025, 1130, 1226, 1895, 2231
TscAI	CASTG	7 cut(s)	951, 1161, 1257, 1509, 1664, 2173, 2191
TseFI	GTSAC	2 cut(s)	1184, 2032
TseI	GCWGC	6 cut(s)	103, 322, 350, 353, 1328, 2243
Tsp45I	GTSAC	2 cut(s)	1184, 2032
TspGWI	ACGGA	2 cut(s)	812, 1638
TspRI	CASTG	7 cut(s)	951, 1161, 1257, 1509, 1664, 2173, 2191
VpaK11BI	GGWCC	3 cut(s)	1390, 1565, 2316
XagI	CCTNNNNNAGG	2 cut(s)	1244, 1370
XapI	RAATTY	6 cut(s)	304, 329, 1512, 1535, 1642, 2162
XbaI	TCTAGA	2 cut(s)	1136, 1870
XceI	RCATGY	2 cut(s)	633, 2065
XhoI	CTCGAG	1 cut(s)	713
XmiI	GTMKAC	2 cut(s)	1982, 2076
XspI	CTAG	8 cut(s)	200, 399, 1095, 1137, 1191, 1871, 2058, 2102
ZrmI	AGTACT	1 cut(s)	1716
Zsp2I	ATGCAT	1 cut(s)	147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.