No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0344851 |
| rosa_multiflora | Rmu_sc0000894.1_g000056 Rmu_sc0001200.1_g000040 |
| rosa_roxburghii | Rroxscaffold_1G00070890 Rroxscaffold_3G00221200 Rroxscaffold_5G00343880 Rroxscaffold_7G00213440 |
| rosa_samantha | Rh1AG143100 Rh4BG128300 Rh6AG209900 Rh6BG213800 Rh6BG487200 Rh6DG205900 |
| rosa_wichuraiana | Rw4G007460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 128, 199 |
| AcsI | RAATTY | 2 cut(s) | 234, 260 |
| AcuI | CTGAAG | 1 cut(s) | 83 |
| AfaI | GTAC | 2 cut(s) | 32, 60 |
| AgsI | TTSAA | 3 cut(s) | 76, 180, 259 |
| AluBI | AGCT | 4 cut(s) | 6, 165, 171, 191 |
| AluI | AGCT | 4 cut(s) | 6, 165, 171, 191 |
| AlwI | GGATC | 2 cut(s) | 128, 199 |
| ApeKI | GCWGC | 1 cut(s) | 191 |
| ApoI | RAATTY | 2 cut(s) | 234, 260 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 71 |
| AxyI | CCTNAGG | 1 cut(s) | 125 |
| BbvI | GCAGC | 1 cut(s) | 178 |
| BisI | GCNGC | 1 cut(s) | 192 |
| BlsI | GCNGC | 1 cut(s) | 193 |
| BmsI | GCATC | 1 cut(s) | 46 |
| BpuEI | CTTGAG | 1 cut(s) | 32 |
| Bse21I | CCTNAGG | 1 cut(s) | 125 |
| BseMII | CTCAG | 3 cut(s) | 32, 74, 139 |
| BseXI | GCAGC | 1 cut(s) | 178 |
| BslFI | GGGAC | 1 cut(s) | 93 |
| BsmFI | GGGAC | 1 cut(s) | 93 |
| Bsp143I | GATC | 2 cut(s) | 133, 204 |
| BspCNI | CTCAG | 3 cut(s) | 33, 75, 138 |
| BspPI | GGATC | 2 cut(s) | 128, 199 |
| BssMI | GATC | 2 cut(s) | 133, 204 |
| Bst4CI | ACNGT | 1 cut(s) | 215 |
| BstDEI | CTNAG | 3 cut(s) | 41, 83, 125 |
| BstKTI | GATC | 2 cut(s) | 136, 207 |
| BstMBI | GATC | 2 cut(s) | 133, 204 |
| BstV1I | GCAGC | 1 cut(s) | 178 |
| BstX2I | RGATCY | 1 cut(s) | 133 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 144 |
| BstYI | RGATCY | 1 cut(s) | 133 |
| Bsu36I | CCTNAGG | 1 cut(s) | 125 |
| BtsIMutI | CAGTG | 1 cut(s) | 116 |
| Csp6I | GTAC | 2 cut(s) | 31, 59 |
| CviJI | RGCY | 4 cut(s) | 6, 165, 171, 191 |
| CviKI_1 | RGCY | 4 cut(s) | 6, 165, 171, 191 |
| CviQI | GTAC | 2 cut(s) | 31, 59 |
| DdeI | CTNAG | 3 cut(s) | 41, 83, 125 |
| DpnI | GATC | 2 cut(s) | 135, 206 |
| DpnII | GATC | 2 cut(s) | 133, 204 |
| Eco57I | CTGAAG | 1 cut(s) | 83 |
| Eco81I | CCTNAGG | 1 cut(s) | 125 |
| FaiI | YATR | 1 cut(s) | 174 |
| FaqI | GGGAC | 1 cut(s) | 93 |
| Fnu4HI | GCNGC | 1 cut(s) | 192 |
| Fsp4HI | GCNGC | 1 cut(s) | 192 |
| GluI | GCNGC | 1 cut(s) | 192 |
| HindIII | AAGCTT | 1 cut(s) | 163 |
| HinfI | GANTC | 1 cut(s) | 46 |
| Hpy188I | TCNGA | 2 cut(s) | 42, 102 |
| Hpy188III | TCNNGA | 2 cut(s) | 11, 127 |
| HpyCH4III | ACNGT | 1 cut(s) | 215 |
| HpyCH4IV | ACGT | 1 cut(s) | 57 |
| HpyCH4V | TGCA | 1 cut(s) | 37 |
| HpyF3I | CTNAG | 3 cut(s) | 41, 83, 125 |
| HpySE526I | ACGT | 1 cut(s) | 57 |
| Kzo9I | GATC | 2 cut(s) | 133, 204 |
| LpnPI | CCDG | 1 cut(s) | 112 |
| Lsp1109I | GCAGC | 1 cut(s) | 178 |
| LweI | GCATC | 1 cut(s) | 46 |
| MaeII | ACGT | 1 cut(s) | 57 |
| MalI | GATC | 2 cut(s) | 135, 206 |
| MboI | GATC | 2 cut(s) | 133, 204 |
| MflI | RGATCY | 1 cut(s) | 133 |
| MluCI | AATT | 4 cut(s) | 18, 150, 234, 260 |
| MnlI | CCTC | 2 cut(s) | 36, 134 |
| MroXI | GAANNNNTTC | 1 cut(s) | 71 |
| MseI | TTAA | 1 cut(s) | 280 |
| MslI | CAYNNNNRTG | 1 cut(s) | 66 |
| NdeII | GATC | 2 cut(s) | 133, 204 |
| NmeAIII | GCCGAG | 1 cut(s) | 30 |
| PdmI | GAANNNNTTC | 1 cut(s) | 71 |
| PfeI | GAWTC | 1 cut(s) | 46 |
| PkrI | GCNGC | 1 cut(s) | 193 |
| PsuI | RGATCY | 1 cut(s) | 133 |
| RsaI | GTAC | 2 cut(s) | 32, 60 |
| RsaNI | GTAC | 2 cut(s) | 31, 59 |
| RseI | CAYNNNNRTG | 1 cut(s) | 66 |
| SaqAI | TTAA | 1 cut(s) | 280 |
| SatI | GCNGC | 1 cut(s) | 192 |
| Sau3AI | GATC | 2 cut(s) | 133, 204 |
| SetI | ASST | 6 cut(s) | 8, 60, 126, 167, 173, 193 |
| SfaNI | GCATC | 1 cut(s) | 46 |
| SgeI | CNNG | 6 cut(s) | 23, 46, 62, 88, 139, 150 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 66 |
| SmlI | CTYRAG | 1 cut(s) | 11 |
| SmoI | CTYRAG | 1 cut(s) | 11 |
| Sse9I | AATT | 4 cut(s) | 18, 150, 234, 260 |
| TaaI | ACNGT | 1 cut(s) | 215 |
| TaiI | ACGT | 1 cut(s) | 60 |
| TasI | AATT | 4 cut(s) | 18, 150, 234, 260 |
| TfiI | GAWTC | 1 cut(s) | 46 |
| Tru1I | TTAA | 1 cut(s) | 280 |
| Tru9I | TTAA | 1 cut(s) | 280 |
| TscAI | CASTG | 1 cut(s) | 123 |
| TseI | GCWGC | 1 cut(s) | 191 |
| TspDTI | ATGAA | 1 cut(s) | 208 |
| TspRI | CASTG | 1 cut(s) | 123 |
| XapI | RAATTY | 2 cut(s) | 234, 260 |
| XmnI | GAANNNNTTC | 1 cut(s) | 71 |