E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13530 AT5G13530 |
| fragaria_vesca | FvH4_7g03470 FvH4_7g03470 FvH4_7g03470 FvH4_7g03470 FvH4_7g03470 |
| malus_domestica | MD02G1282000.v1.1 MD07G1048200.v1.1 |
| prunus_persica | Prupe.2G040800_v2.0.a1 Prupe.2G040800_v2.0.a1 |
| pyrus_communis | pycom02g24080 pycom07g03500 |
| rosa_chinensis | RchiOBHm_Chr1g0325801 |
| rosa_laevigata | RLG00000030103 |
| rosa_roxburghii | Rroxscaffold_4G00324310 |
| rosa_rugosa | Rorug01G0055000 |
| rosa_samantha | Rh1BG058300 Rh1CG070800 Rh1DG075500 |
| rosa_wichuraiana | Rw1G005810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AflII | CTTAAG | 1 cut(s) | 7 |
| AgsI | TTSAA | 1 cut(s) | 201 |
| AjnI | CCWGG | 1 cut(s) | 180 |
| AluBI | AGCT | 3 cut(s) | 130, 205, 222 |
| AluI | AGCT | 3 cut(s) | 130, 205, 222 |
| Alw21I | GWGCWC | 1 cut(s) | 81 |
| ApeKI | GCWGC | 4 cut(s) | 104, 130, 209, 226 |
| Bbv12I | GWGCWC | 1 cut(s) | 81 |
| BbvI | GCAGC | 4 cut(s) | 116, 117, 221, 238 |
| BciT130I | CCWGG | 1 cut(s) | 182 |
| BfaI | CTAG | 2 cut(s) | 83, 239 |
| BfmI | CTRYAG | 2 cut(s) | 97, 131 |
| BfrI | CTTAAG | 1 cut(s) | 7 |
| BisI | GCNGC | 4 cut(s) | 105, 131, 210, 227 |
| BlsI | GCNGC | 4 cut(s) | 106, 132, 211, 228 |
| Bme1390I | CCNGG | 1 cut(s) | 182 |
| BmrFI | CCNGG | 1 cut(s) | 182 |
| BmsI | GCATC | 1 cut(s) | 116 |
| BpmI | CTGGAG | 1 cut(s) | 146 |
| BsaJI | CCNNGG | 1 cut(s) | 117 |
| Bse1I | ACTGG | 2 cut(s) | 52, 195 |
| BseBI | CCWGG | 1 cut(s) | 182 |
| BseDI | CCNNGG | 1 cut(s) | 117 |
| BseGI | GGATG | 1 cut(s) | 41 |
| BseNI | ACTGG | 2 cut(s) | 52, 195 |
| BseXI | GCAGC | 4 cut(s) | 116, 117, 221, 238 |
| BsiHKAI | GWGCWC | 1 cut(s) | 81 |
| Bsp1286I | GDGCHC | 1 cut(s) | 81 |
| Bsp143I | GATC | 1 cut(s) | 11 |
| BspMAI | CTGCAG | 2 cut(s) | 101, 135 |
| BspTI | CTTAAG | 1 cut(s) | 7 |
| BsrI | ACTGG | 2 cut(s) | 52, 195 |
| BssECI | CCNNGG | 1 cut(s) | 117 |
| BssMI | GATC | 1 cut(s) | 11 |
| BssT1I | CCWWGG | 1 cut(s) | 117 |
| Bst2UI | CCWGG | 1 cut(s) | 182 |
| Bst4CI | ACNGT | 1 cut(s) | 235 |
| BstAFI | CTTAAG | 1 cut(s) | 7 |
| BstC8I | GCNNGC | 2 cut(s) | 207, 224 |
| BstF5I | GGATG | 1 cut(s) | 41 |
| BstKTI | GATC | 1 cut(s) | 14 |
| BstMBI | GATC | 1 cut(s) | 11 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 113, 136 |
| BstNI | CCWGG | 1 cut(s) | 182 |
| BstSCI | CCNGG | 1 cut(s) | 180 |
| BstSFI | CTRYAG | 2 cut(s) | 97, 131 |
| BstV1I | GCAGC | 4 cut(s) | 116, 117, 221, 238 |
| BtsCI | GGATG | 1 cut(s) | 41 |
| Cac8I | GCNNGC | 2 cut(s) | 207, 224 |
| CviJI | RGCY | 6 cut(s) | 116, 130, 205, 222, 229, 242 |
| CviKI_1 | RGCY | 6 cut(s) | 116, 130, 205, 222, 229, 242 |
| DpnI | GATC | 1 cut(s) | 13 |
| DpnII | GATC | 1 cut(s) | 11 |
| Eco130I | CCWWGG | 1 cut(s) | 117 |
| EcoRII | CCWGG | 1 cut(s) | 180 |
| EcoT14I | CCWWGG | 1 cut(s) | 117 |
| ErhI | CCWWGG | 1 cut(s) | 117 |
| FaiI | YATR | 2 cut(s) | 23, 144 |
| Fnu4HI | GCNGC | 4 cut(s) | 105, 131, 210, 227 |
| FokI | GGATG | 1 cut(s) | 28 |
| Fsp4HI | GCNGC | 4 cut(s) | 105, 131, 210, 227 |
| FspBI | CTAG | 2 cut(s) | 83, 239 |
| GluI | GCNGC | 4 cut(s) | 105, 131, 210, 227 |
| GsuI | CTGGAG | 1 cut(s) | 146 |
| HinfI | GANTC | 2 cut(s) | 61, 89 |
| Hpy188I | TCNGA | 1 cut(s) | 94 |
| Hpy188III | TCNNGA | 1 cut(s) | 163 |
| HpyCH4III | ACNGT | 1 cut(s) | 235 |
| HpyCH4V | TGCA | 2 cut(s) | 99, 133 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 113, 136 |
| Kzo9I | GATC | 1 cut(s) | 11 |
| LmnI | GCTCC | 2 cut(s) | 84, 165 |
| LpnPI | CCDG | 8 cut(s) | 54, 65, 167, 176, 191, 194, 208, 208 |
| Lsp1109I | GCAGC | 4 cut(s) | 116, 117, 221, 238 |
| LweI | GCATC | 1 cut(s) | 116 |
| MaeI | CTAG | 2 cut(s) | 83, 239 |
| MalI | GATC | 1 cut(s) | 13 |
| MboI | GATC | 1 cut(s) | 11 |
| MboII | GAAGA | 2 cut(s) | 98, 178 |
| MhlI | GDGCHC | 1 cut(s) | 81 |
| MlyI | GAGTC | 1 cut(s) | 70 |
| MmeI | TCCRAC | 1 cut(s) | 117 |
| MnlI | CCTC | 2 cut(s) | 67, 129 |
| MseI | TTAA | 1 cut(s) | 8 |
| MspCI | CTTAAG | 1 cut(s) | 7 |
| MspR9I | CCNGG | 1 cut(s) | 182 |
| MvaI | CCWGG | 1 cut(s) | 182 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 113, 136 |
| NdeII | GATC | 1 cut(s) | 11 |
| PfeI | GAWTC | 1 cut(s) | 89 |
| PfoI | TCCNGGA | 1 cut(s) | 180 |
| PkrI | GCNGC | 4 cut(s) | 106, 132, 211, 228 |
| PleI | GAGTC | 1 cut(s) | 69 |
| PpsI | GAGTC | 1 cut(s) | 69 |
| Psp6I | CCWGG | 1 cut(s) | 180 |
| PspGI | CCWGG | 1 cut(s) | 180 |
| PstI | CTGCAG | 2 cut(s) | 101, 135 |
| SaqAI | TTAA | 1 cut(s) | 8 |
| SatI | GCNGC | 4 cut(s) | 105, 131, 210, 227 |
| Sau3AI | GATC | 1 cut(s) | 11 |
| SchI | GAGTC | 1 cut(s) | 70 |
| ScrFI | CCNGG | 1 cut(s) | 182 |
| SduI | GDGCHC | 1 cut(s) | 81 |
| SetI | ASST | 5 cut(s) | 78, 123, 132, 207, 224 |
| SfaNI | GCATC | 1 cut(s) | 116 |
| SfcI | CTRYAG | 2 cut(s) | 97, 131 |
| SmlI | CTYRAG | 1 cut(s) | 7 |
| SmoI | CTYRAG | 1 cut(s) | 7 |
| SspMI | CTAG | 2 cut(s) | 83, 239 |
| StyD4I | CCNGG | 1 cut(s) | 180 |
| StyI | CCWWGG | 1 cut(s) | 117 |
| TaaI | ACNGT | 1 cut(s) | 235 |
| TfiI | GAWTC | 1 cut(s) | 89 |
| Tru1I | TTAA | 1 cut(s) | 8 |
| Tru9I | TTAA | 1 cut(s) | 8 |
| TseI | GCWGC | 4 cut(s) | 104, 130, 209, 226 |
| Vha464I | CTTAAG | 1 cut(s) | 7 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 202 |
| XspI | CTAG | 2 cut(s) | 83, 239 |