Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0006305

Physical Location & Seq

Genomic Coordinates Forward (+)

13514205 .. 13516646

Gene Structure 2442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0083000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGCAGCAAACTCTCATTTCTTCCTTTTGCTTCATCTTGCTGGCTTTCTCCTCCAAAGTCCTTGGTGAAAAATCGAGGCATTGTAAACATGGCCCAGATATCAAATTCCCTTTTAGCTTCAAAGGTAGCCAGCACCCTGGGTATCCTGGGTTTCTTGTATCCTGCAATGAAAAGCAGGAAACCATTCTTGAGCTGCCAATCCCAGTTAAATTCGCAATCGAAACCATAGACTATGAAGCTCAGCAAATCCAGCTATATGACCCAGAAAATTGCTTGCTGATGAAGCTATCGAATGTCCACAACATGTCAATCTCTCCCTTCAACTACTCAACAGACCAAATAGCTGATATTACCTTATTCAATTGTTCTTCAGCTAAAAGGGAATCATTGTACGATATGGATCCAGTCCCCTGCTTTTATGGCCCTGGCTACCAAATCTATTCGGTTTCTTCTTCCCGAAACATTGAGGACTTGCCCCTCCTGTCTTGTACAAAGATGCGTAATCTTTCACTGGTTCCATACAGCTCGTATGGATATCCAATTTCAAATCTTTATTTGGAATGGTCTGAACCAAATTGTAGACCGTGTGAAGCACATGGCACGATATATGATTTCAAGAAGAATGGCACCACAAGTACTGAAATTGAATGCCTTCCCAGGAAGAAAGAAGGTGCTTCCCTGGGTTCATTTGTACTCGTACTAGTTGCTGCTGCAGCTTATCATGTCTATAGTTCTGACAGAAAAGAAAAACAGAATCAATTAAAAATTGAAAATTTTTTAGAGGATTACAGAGCTCTCAAACCAAGCAGATACTCCTATGCAGATATCAAGAGGATTACAAATCAGTTCAAGGACAAATTAGGCCAAGGAGCCTATGGAACTGTTTATAAGGGAAAGCTTTCTTCTGAATGTTTTGTTGCTGTCAAAGTCCTCAATAGTACAAAGGGGGATGGGGAAGAGTTTGTAAATGAAGTGGGAACAATGGGTCATATCCACCATGTCAATGTGGTTCGCTTGGTTGGATTCTGTGCTGATGGGTTTAGACGAGCTCTTGTTTATGACTTCTTACCTAATGGTTCACTGCAAGATTTCATTTCATCAGCAGACAATAACAATTCTTTTCTTGGTTGGGATAAGTTGCAAGATATTGCTCTAGGCATAGCCAAGGGAATTGAATATCTACACCAAGGATGCGATCAACGAATCCTCCATTTCGATATCAAACCCCACAATGTTTTGCTTGACCATAACTTCACCCCAAAGATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAGAGTATAGTGTCAATGACTACAGCTAGGGGAACGATGGGGTACATTGCACCTGAAGTGTTCTCCAGAAACTTTGGAAATGTATCCTATAAGTCAGATGTGTATAGTTATGGAATGGTACTGCTCGAGATGGTAGGAGGAAGAAAGAACATCAGTTCAACCACAGAGAACACAACTGAAGTTTACTACCCGGAATGGATCTATAATCTACTGGAAGAAGGTGAAGACCTTCGAATCCATGTTGGGGAAGAAGGAGATGCTAAAATTGCTAAGAGACTTGCGATTGTCGGTCTCTGGTGCATCCAATGGCACCCGGTAGATCGTCCTTCAATGAAAGGGGTGGTTCAGATGTTGGAAGGAGGAGAAAACTTAACTATGCCTCCAAATCCTTTTTCCTCTCAAGGTCCTACAGGAACAAGTGCAAGTACACCTGCCAGAAGATTAAACCTTCAACTGGAAGCAATTGCCGAGTTAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00450 ko01100 map00450 map01100

Pfam Domains

Protein Families

Aminotran_5

Protein Analysis

593

Amino Acids

66.47

Weight (kDa)

5.97

Isoelectric Point (pI)

42.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	26 - 87	8.9e-13	Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr	PF07714	282 - 552	1.6e-44	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	283 - 550	4.8e-47	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08490
fragaria_vesca	FvH4_7g04510 FvH4_7g04510 FvH4_7g04510 FvH4_7g04510 FvH4_7g04510 FvH4_7g04510 FvH4_7g04510 FvH4_7g04510 FvH4_7g04510 FvH4_7g04540
malus_domestica	MD15G1421300.v1.1
prunus_persica	Prupe.1G566600_v2.0.a1
pyrus_communis	pycom15g37350
rosa_chinensis	RchiOBHm_Chr1g0329781
rosa_laevigata	RLG00000029865
rosa_multiflora	Rmu_sc0003459.1_g000017 Rmu_sc0007681.1_g000009 Rmu_sc0013927.1_g000001
rosa_roxburghii	Rroxscaffold_4G00320710
rosa_rugosa	Rorug01G0083000
rosa_samantha	Rh1AG101300 Rh1BG080400 Rh1CG088700 Rh1CG096600 Rh1DG104500
rosa_wichuraiana	Rw1G007990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	888
AarI	CACCTGC	1 cut(s)	1741
Acc36I	ACCTGC	1 cut(s)	1741
AccB1I	GGYRCC	2 cut(s)	626, 1611
AccI	GTMKAC	1 cut(s)	580
AclWI	GGATC	4 cut(s)	395, 408, 1308, 1508
AcoI	YGGCCR	1 cut(s)	1281
AcsI	RAATTY	3 cut(s)	104, 209, 772
AcuI	CTGAAG	3 cut(s)	354, 1377, 1500
AfaI	GTAC	9 cut(s)	392, 490, 637, 693, 699, 940, 1346, 1422, 1729
AfiI	CCNNNNNNNGG	2 cut(s)	1546, 1756
AflIII	ACRYGT	1 cut(s)	303
AhlI	ACTAGT	1 cut(s)	700
AjnI	CCWGG	5 cut(s)	136, 145, 424, 656, 678
AjuI	GAANNNNNNNTTGG	2 cut(s)	1678, 1710
Alw21I	GWGCWC	2 cut(s)	796, 1051
Alw26I	GTCTC	2 cut(s)	1570, 1598
AlwI	GGATC	4 cut(s)	395, 408, 1308, 1508
Ama87I	CYCGRG	1 cut(s)	1427
AoxI	GGCC	4 cut(s)	91, 421, 862, 1281
ApeKI	GCWGC	5 cut(s)	4, 193, 707, 710, 713
ApoI	RAATTY	3 cut(s)	104, 209, 772
Asp700I	GAANNNNTTC	4 cut(s)	183, 651, 898, 1530
AspS9I	GGNCC	3 cut(s)	92, 422, 1706
AsuC2I	CCSGG	2 cut(s)	1493, 1616
AsuHPI	GGTGA	3 cut(s)	77, 1246, 1535
AsuII	TTCGAA	1 cut(s)	1534
AvaI	CYCGRG	1 cut(s)	1427
AvaII	GGWCC	1 cut(s)	1706
BalI	TGGCCA	1 cut(s)	1283
BamHI	GGATCC	1 cut(s)	400
BanI	GGYRCC	2 cut(s)	626, 1611
BanII	GRGCYC	2 cut(s)	796, 1051
BbsI	GAAGAC	1 cut(s)	1533
Bbv12I	GWGCWC	2 cut(s)	796, 1051
BbvI	GCAGC	5 cut(s)	16, 180, 694, 697, 725
BccI	CCATC	4 cut(s)	944, 1028, 1333, 1426
BciT130I	CCWGG	5 cut(s)	138, 147, 426, 658, 680
BciVI	GTATCC	3 cut(s)	153, 169, 1396
BcnI	CCSGG	2 cut(s)	1493, 1616
BcoDI	GTCTC	2 cut(s)	1570, 1598
BcuI	ACTAGT	1 cut(s)	700
BfaI	CTAG	3 cut(s)	701, 1154, 1329
BfmI	CTRYAG	4 cut(s)	711, 727, 1323, 1710
BfuAI	ACCTGC	1 cut(s)	1741
BfuI	GTATCC	3 cut(s)	153, 169, 1396
BisI	GCNGC	5 cut(s)	5, 194, 708, 711, 714
BlpI	GCTNAGC	1 cut(s)	240
BlsI	GCNGC	5 cut(s)	6, 195, 709, 712, 715
BmcAI	AGTACT	1 cut(s)	637
Bme1390I	CCNGG	7 cut(s)	138, 147, 426, 658, 680, 1493, 1616
Bme18I	GGWCC	1 cut(s)	1706
BmeT110I	CYCGRG	1 cut(s)	1427
BmgT120I	GGNCC	3 cut(s)	92, 422, 1706
BmiI	GGNNCC	5 cut(s)	402, 516, 628, 871, 1613
BmrFI	CCNGG	7 cut(s)	138, 147, 426, 658, 680, 1493, 1616
BmrI	ACTGGG	1 cut(s)	197
BmsI	GCATC	4 cut(s)	486, 1181, 1549, 1611
BmuI	ACTGGG	1 cut(s)	197
BpiI	GAAGAC	1 cut(s)	1533
BpmI	CTGGAG	1 cut(s)	1351
Bpu1102I	GCTNAGC	1 cut(s)	240
Bpu14I	TTCGAA	1 cut(s)	1534
BpuEI	CTTGAG	2 cut(s)	209, 1686
BpuMI	CCSGG	2 cut(s)	1493, 1616
BsaBI	GATNNNNATC	1 cut(s)	399
BsaI	GGTCTC	1 cut(s)	1598
BsaXI	ACNNNNNCTCC	4 cut(s)	1191, 1221, 1666, 1696
Bsc4I	CCNNNNNNNGG	2 cut(s)	1546, 1756
Bse1I	ACTGG	5 cut(s)	203, 404, 516, 1518, 1761
Bse3DI	GCAATG	2 cut(s)	172, 1347
Bse8I	GATNNNNATC	1 cut(s)	399
BseBI	CCWGG	5 cut(s)	138, 147, 426, 658, 680
BseGI	GGATG	3 cut(s)	955, 1196, 1602
BseJI	GATNNNNATC	1 cut(s)	399
BseLI	CCNNNNNNNGG	2 cut(s)	1546, 1756
BseMI	GCAATG	2 cut(s)	172, 1347
BseMII	CTCAG	1 cut(s)	254
BseNI	ACTGG	5 cut(s)	203, 404, 516, 1518, 1761
BseRI	GAGGAG	2 cut(s)	40, 1677
BseXI	GCAGC	5 cut(s)	16, 180, 694, 697, 725
BshFI	GGCC	4 cut(s)	93, 423, 864, 1283
BshNI	GGYRCC	2 cut(s)	626, 1611
BsiHKAI	GWGCWC	2 cut(s)	796, 1051
BsiHKCI	CYCGRG	1 cut(s)	1427
BsiSI	CCGG	2 cut(s)	1493, 1616
BslFI	GGGAC	1 cut(s)	392
BslI	CCNNNNNNNGG	2 cut(s)	1546, 1756
BsmAI	GTCTC	2 cut(s)	1570, 1598
BsmFI	GGGAC	1 cut(s)	392
BsmI	GAATGC	1 cut(s)	653
BsnI	GGCC	4 cut(s)	93, 423, 864, 1283
Bso31I	GGTCTC	1 cut(s)	1598
BsoBI	CYCGRG	1 cut(s)	1427
Bsp119I	TTCGAA	1 cut(s)	1534
Bsp1286I	GDGCHC	2 cut(s)	796, 1051
Bsp1407I	TGTACA	1 cut(s)	488
Bsp143I	GATC	5 cut(s)	400, 1195, 1300, 1500, 1621
Bsp1720I	GCTNAGC	1 cut(s)	240
BspANI	GGCC	4 cut(s)	93, 423, 864, 1283
BspCNI	CTCAG	1 cut(s)	253
BspLI	GGNNCC	5 cut(s)	402, 516, 628, 871, 1613
BspMAI	CTGCAG	1 cut(s)	715
BspMI	ACCTGC	1 cut(s)	1741
BspPI	GGATC	4 cut(s)	395, 408, 1308, 1508
BspT104I	TTCGAA	1 cut(s)	1534
BspT107I	GGYRCC	2 cut(s)	626, 1611
BspTNI	GGTCTC	1 cut(s)	1598
BsrDI	GCAATG	2 cut(s)	172, 1347
BsrGI	TGTACA	1 cut(s)	488
BsrI	ACTGG	5 cut(s)	203, 404, 516, 1518, 1761
BssMI	GATC	5 cut(s)	400, 1195, 1300, 1500, 1621
BssT1I	CCWWGG	5 cut(s)	61, 865, 1164, 1186, 1296
Bst2UI	CCWGG	5 cut(s)	138, 147, 426, 658, 680
Bst4CI	ACNGT	2 cut(s)	585, 883
Bst6I	CTCTTC	1 cut(s)	951
BstAUI	TGTACA	1 cut(s)	488
BstBI	TTCGAA	1 cut(s)	1534
BstC8I	GCNNGC	3 cut(s)	42, 131, 275
BstDEI	CTNAG	2 cut(s)	240, 1572
BstF5I	GGATG	3 cut(s)	955, 1196, 1602
BstKTI	GATC	5 cut(s)	403, 1198, 1303, 1503, 1624
BstMAI	GTCTC	2 cut(s)	1570, 1598
BstMBI	GATC	5 cut(s)	400, 1195, 1300, 1500, 1621
BstMWI	GCNNNNNNNGC	5 cut(s)	250, 283, 420, 713, 1568
BstNI	CCWGG	5 cut(s)	138, 147, 426, 658, 680
BstNSI	RCATGY	1 cut(s)	307
BstSCI	CCNGG	7 cut(s)	136, 145, 424, 656, 678, 1491, 1614
BstSFI	CTRYAG	4 cut(s)	711, 727, 1323, 1710
BstV1I	GCAGC	5 cut(s)	16, 180, 694, 697, 725
BstV2I	GAAGAC	1 cut(s)	1533
BstX2I	RGATCY	2 cut(s)	400, 1500
BstXI	CCANNNNNNTGG	1 cut(s)	137
BstYI	RGATCY	2 cut(s)	400, 1500
BsuI	GTATCC	3 cut(s)	153, 169, 1396
BsuRI	GGCC	4 cut(s)	93, 423, 864, 1283
BtsCI	GGATG	3 cut(s)	955, 1196, 1602
BtsI	GCAGTG	1 cut(s)	1079
BtsIMutI	CAGTG	2 cut(s)	509, 1079
BveI	ACCTGC	1 cut(s)	1741
Cac8I	GCNNGC	3 cut(s)	42, 131, 275
Cfr13I	GGNCC	3 cut(s)	92, 422, 1706
Csp6I	GTAC	9 cut(s)	391, 489, 636, 692, 698, 939, 1345, 1421, 1728
CviAII	CATG	6 cut(s)	89, 304, 596, 722, 998, 1541
CviQI	GTAC	9 cut(s)	391, 489, 636, 692, 698, 939, 1345, 1421, 1728
DdeI	CTNAG	2 cut(s)	240, 1572
DpnI	GATC	5 cut(s)	402, 1197, 1302, 1502, 1623
DpnII	GATC	5 cut(s)	400, 1195, 1300, 1500, 1621
EaeI	YGGCCR	1 cut(s)	1281
Eam1104I	CTCTTC	1 cut(s)	951
EarI	CTCTTC	1 cut(s)	951
Ecl136II	GAGCTC	2 cut(s)	794, 1049
Eco130I	CCWWGG	5 cut(s)	61, 865, 1164, 1186, 1296
Eco24I	GRGCYC	2 cut(s)	796, 1051
Eco31I	GGTCTC	1 cut(s)	1598
Eco32I	GATATC	4 cut(s)	100, 536, 826, 1219
Eco47I	GGWCC	1 cut(s)	1706
Eco53kI	GAGCTC	2 cut(s)	794, 1049
Eco57I	CTGAAG	3 cut(s)	354, 1377, 1500
Eco88I	CYCGRG	1 cut(s)	1427
EcoICRI	GAGCTC	2 cut(s)	794, 1049
EcoO109I	RGGNCCY	1 cut(s)	1706
EcoRII	CCWGG	5 cut(s)	136, 145, 424, 656, 678
EcoRV	GATATC	4 cut(s)	100, 536, 826, 1219
EcoT14I	CCWWGG	5 cut(s)	61, 865, 1164, 1186, 1296
EcoT38I	GRGCYC	2 cut(s)	796, 1051
ErhI	CCWWGG	5 cut(s)	61, 865, 1164, 1186, 1296
FaeI	CATG	6 cut(s)	92, 307, 599, 725, 1001, 1544
FaqI	GGGAC	1 cut(s)	392
FatI	CATG	6 cut(s)	88, 303, 595, 721, 997, 1540
FblI	GTMKAC	1 cut(s)	580
Fnu4HI	GCNGC	5 cut(s)	5, 194, 708, 711, 714
FokI	GGATG	3 cut(s)	962, 1203, 1589
FriOI	GRGCYC	2 cut(s)	796, 1051
Fsp4HI	GCNGC	5 cut(s)	5, 194, 708, 711, 714
FspBI	CTAG	3 cut(s)	701, 1154, 1329
GluI	GCNGC	5 cut(s)	5, 194, 708, 711, 714
GsuI	CTGGAG	1 cut(s)	1351
HaeIII	GGCC	4 cut(s)	93, 423, 864, 1283
HapII	CCGG	2 cut(s)	1493, 1616
Hin1II	CATG	6 cut(s)	92, 307, 599, 725, 1001, 1544
HindIII	AAGCTT	1 cut(s)	896
HinfI	GANTC	5 cut(s)	383, 754, 1023, 1203, 1536
HpaII	CCGG	2 cut(s)	1493, 1616
HphI	GGTGA	3 cut(s)	77, 1246, 1535
Hpy166II	GTNNAC	6 cut(s)	86, 298, 581, 1079, 1486, 1730
Hpy188I	TCNGA	7 cut(s)	568, 736, 907, 1270, 1305, 1399, 1650
Hpy188III	TCNNGA	6 cut(s)	188, 456, 616, 829, 1368, 1429
Hpy8I	GTNNAC	6 cut(s)	86, 298, 581, 1079, 1486, 1730
HpyAV	CCTTC	9 cut(s)	328, 662, 662, 1514, 1541, 1547, 1638, 1652, 1760
HpyCH4III	ACNGT	2 cut(s)	585, 883
HpyCH4V	TGCA	9 cut(s)	4, 165, 713, 821, 1084, 1141, 1352, 1602, 1724
HpyF10VI	GCNNNNNNNGC	5 cut(s)	250, 283, 420, 713, 1568
HpyF3I	CTNAG	2 cut(s)	240, 1572
Hsp92II	CATG	6 cut(s)	92, 307, 599, 725, 1001, 1544
Kzo9I	GATC	5 cut(s)	400, 1195, 1300, 1500, 1621
LmnI	GCTCC	1 cut(s)	869
Lsp1109I	GCAGC	5 cut(s)	16, 180, 694, 697, 725
LweI	GCATC	4 cut(s)	486, 1181, 1549, 1611
MaeI	CTAG	3 cut(s)	701, 1154, 1329
MalI	GATC	5 cut(s)	402, 1197, 1302, 1502, 1623
MboI	GATC	5 cut(s)	400, 1195, 1300, 1500, 1621
MfeI	CAATTG	2 cut(s)	361, 1764
MflI	RGATCY	2 cut(s)	400, 1500
MhlI	GDGCHC	2 cut(s)	796, 1051
MlsI	TGGCCA	1 cut(s)	1283
MluNI	TGGCCA	1 cut(s)	1283
MmeI	TCCRAC	2 cut(s)	1000, 1635
Mox20I	TGGCCA	1 cut(s)	1283
MroXI	GAANNNNTTC	4 cut(s)	183, 651, 898, 1530
MscI	TGGCCA	1 cut(s)	1283
MseI	TTAA	4 cut(s)	207, 761, 1673, 1745
MslI	CAYNNNNRTG	1 cut(s)	1002
Msp20I	TGGCCA	1 cut(s)	1283
MspI	CCGG	2 cut(s)	1493, 1616
MspR9I	CCNGG	7 cut(s)	138, 147, 426, 658, 680, 1493, 1616
MunI	CAATTG	2 cut(s)	361, 1764
Mva1269I	GAATGC	1 cut(s)	653
MvaI	CCWGG	5 cut(s)	138, 147, 426, 658, 680
MwoI	GCNNNNNNNGC	5 cut(s)	250, 283, 420, 713, 1568
NciI	CCSGG	2 cut(s)	1493, 1616
NdeII	GATC	5 cut(s)	400, 1195, 1300, 1500, 1621
NlaIII	CATG	6 cut(s)	92, 307, 599, 725, 1001, 1544
NlaIV	GGNNCC	5 cut(s)	402, 516, 628, 871, 1613
NspI	RCATGY	1 cut(s)	307
NspV	TTCGAA	1 cut(s)	1534
PaeR7I	CTCGAG	1 cut(s)	1427
PaqCI	CACCTGC	1 cut(s)	1741
PasI	CCCWGGG	2 cut(s)	137, 679
PciI	ACATGT	1 cut(s)	303
PctI	GAATGC	1 cut(s)	653
PdmI	GAANNNNTTC	4 cut(s)	183, 651, 898, 1530
PfeI	GAWTC	5 cut(s)	383, 754, 1023, 1203, 1536
PkrI	GCNGC	5 cut(s)	6, 195, 709, 712, 715
PpuMI	RGGWCCY	1 cut(s)	1706
PscI	ACATGT	1 cut(s)	303
PsiI	TTATAA	1 cut(s)	888
Psp124BI	GAGCTC	2 cut(s)	796, 1051
Psp5II	RGGWCCY	1 cut(s)	1706
Psp6I	CCWGG	5 cut(s)	136, 145, 424, 656, 678
PspGI	CCWGG	5 cut(s)	136, 145, 424, 656, 678
PspN4I	GGNNCC	5 cut(s)	402, 516, 628, 871, 1613
PspPI	GGNCC	3 cut(s)	92, 422, 1706
PspPPI	RGGWCCY	1 cut(s)	1706
PstI	CTGCAG	1 cut(s)	715
PsuI	RGATCY	2 cut(s)	400, 1500
RsaI	GTAC	9 cut(s)	392, 490, 637, 693, 699, 940, 1346, 1422, 1729
RsaNI	GTAC	9 cut(s)	391, 489, 636, 692, 698, 939, 1345, 1421, 1728
RseI	CAYNNNNRTG	1 cut(s)	1002
SacI	GAGCTC	2 cut(s)	796, 1051
SaqAI	TTAA	4 cut(s)	207, 761, 1673, 1745
SatI	GCNGC	5 cut(s)	5, 194, 708, 711, 714
Sau3AI	GATC	5 cut(s)	400, 1195, 1300, 1500, 1621
Sau96I	GGNCC	3 cut(s)	92, 422, 1706
ScaI	AGTACT	1 cut(s)	637
ScrFI	CCNGG	7 cut(s)	138, 147, 426, 658, 680, 1493, 1616
SduI	GDGCHC	2 cut(s)	796, 1051
SfaNI	GCATC	4 cut(s)	486, 1181, 1549, 1611
SfcI	CTRYAG	4 cut(s)	711, 727, 1323, 1710
Sfr274I	CTCGAG	1 cut(s)	1427
SfuI	TTCGAA	1 cut(s)	1534
SinI	GGWCC	1 cut(s)	1706
SlaI	CTCGAG	1 cut(s)	1427
SmiMI	CAYNNNNRTG	1 cut(s)	1002
SmlI	CTYRAG	3 cut(s)	188, 1427, 1701
SmoI	CTYRAG	3 cut(s)	188, 1427, 1701
SpeI	ACTAGT	1 cut(s)	700
SspMI	CTAG	3 cut(s)	701, 1154, 1329
SstI	GAGCTC	2 cut(s)	796, 1051
StyD4I	CCNGG	7 cut(s)	136, 145, 424, 656, 678, 1491, 1614
StyI	CCWWGG	5 cut(s)	61, 865, 1164, 1186, 1296
TaaI	ACNGT	2 cut(s)	585, 883
TaqI	TCGA	6 cut(s)	74, 219, 290, 1215, 1428, 1534
TaqII	GACCGA	1 cut(s)	1580
TatI	WGTACW	5 cut(s)	488, 635, 691, 938, 1727
TfiI	GAWTC	5 cut(s)	383, 754, 1023, 1203, 1536
Tru1I	TTAA	4 cut(s)	207, 761, 1673, 1745
Tru9I	TTAA	4 cut(s)	207, 761, 1673, 1745
TscAI	CASTG	2 cut(s)	516, 1086
TseI	GCWGC	5 cut(s)	4, 193, 707, 710, 713
TspDTI	ATGAA	9 cut(s)	22, 183, 249, 296, 675, 984, 1081, 1086, 1649
TspRI	CASTG	2 cut(s)	516, 1086
VpaK11BI	GGWCC	1 cut(s)	1706
XapI	RAATTY	3 cut(s)	104, 209, 772
XceI	RCATGY	1 cut(s)	307
XcmI	CCANNNNNNNNNTGG	1 cut(s)	872
XhoI	CTCGAG	1 cut(s)	1427
XmiI	GTMKAC	1 cut(s)	580
XmnI	GAANNNNTTC	4 cut(s)	183, 651, 898, 1530
XspI	CTAG	3 cut(s)	701, 1154, 1329
ZrmI	AGTACT	1 cut(s)	637

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.